Alfalfa Gene Editing Database
Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
Msa0815960 | XP_003616291.1 | 96.964 | 988 | 28 | 1 | 1 | 988 | 1 | 986 | 0.0 | 1947 |
Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
Msa0815960 | sp|Q0WNW4|MYOB3_ARATH | 46.212 | 396 | 170 | 7 | 572 | 966 | 310 | 663 | 6.27e-86 | 293 |
Msa0815960 | sp|Q0WNW4|MYOB3_ARATH | 38.214 | 280 | 117 | 10 | 1 | 259 | 1 | 245 | 3.50e-45 | 177 |
Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
Msa0815960 | G7K1Q1 | 96.964 | 988 | 28 | 1 | 1 | 988 | 1 | 986 | 0.0 | 1947 |
Gene ID | Type | Classification |
---|
Gene ID | Type | Classification |
---|
Co-expression Network
Gene1 | Gene2 | correlation coefficient | p_value | FDR |
---|---|---|---|---|
Msa0000050 | Msa0815960 | 0.818270 | 2.139555e-52 | -8.615850e-47 |
Msa0001960 | Msa0815960 | 0.809854 | 1.540418e-50 | -8.615850e-47 |
Msa0002580 | Msa0815960 | 0.801883 | 7.296027e-49 | -8.615850e-47 |
Msa0005890 | Msa0815960 | 0.817365 | 3.425639e-52 | -8.615850e-47 |
Msa0024000 | Msa0815960 | 0.823533 | 1.316305e-53 | -8.615850e-47 |
Msa0025330 | Msa0815960 | 0.839303 | 1.717719e-57 | -8.615850e-47 |
Msa0028580 | Msa0815960 | 0.812372 | 4.382408e-51 | -8.615850e-47 |
Msa0030990 | Msa0815960 | 0.805748 | 1.149129e-49 | -8.615850e-47 |
Msa0032920 | Msa0815960 | -0.837786 | 4.231735e-57 | -8.615850e-47 |
Msa0032960 | Msa0815960 | -0.818791 | 1.630220e-52 | -8.615850e-47 |
Msa0049790 | Msa0815960 | 0.826097 | 3.270753e-54 | -8.615850e-47 |
Msa0072900 | Msa0815960 | 0.843518 | 1.334096e-58 | -8.615850e-47 |
Msa0074350 | Msa0815960 | 0.800087 | 1.698573e-48 | -8.615850e-47 |
Msa0081520 | Msa0815960 | 0.820144 | 8.012317e-53 | -8.615850e-47 |
Msa0093850 | Msa0815960 | 0.806275 | 8.902361e-50 | -8.615850e-47 |
Msa0094780 | Msa0815960 | 0.808137 | 3.590969e-50 | -8.615850e-47 |
Msa0097770 | Msa0815960 | 0.815352 | 9.663213e-52 | -8.615850e-47 |
Msa0101270 | Msa0815960 | 0.803152 | 3.996047e-49 | -8.615850e-47 |
Msa0108390 | Msa0815960 | 0.806879 | 6.639942e-50 | -8.615850e-47 |
Msa0108410 | Msa0815960 | 0.809517 | 1.819945e-50 | -8.615850e-47 |
Msa0611210 | Msa0815960 | 0.806906 | 6.550722e-50 | -8.615850e-47 |
Msa0623330 | Msa0815960 | 0.806327 | 8.679741e-50 | -8.615850e-47 |
Msa0623710 | Msa0815960 | 0.804718 | 1.887999e-49 | -8.615850e-47 |
Msa0625720 | Msa0815960 | 0.802204 | 6.267657e-49 | -8.615850e-47 |
Msa0626450 | Msa0815960 | 0.862844 | 3.800485e-64 | -8.615850e-47 |
Msa0626490 | Msa0815960 | 0.862292 | 5.618766e-64 | -8.615850e-47 |
Msa0626510 | Msa0815960 | 0.803249 | 3.814857e-49 | -8.615850e-47 |
Msa0633700 | Msa0815960 | 0.800425 | 1.450261e-48 | -8.615850e-47 |
Msa0644410 | Msa0815960 | 0.807545 | 4.797071e-50 | -8.615850e-47 |
Msa0651550 | Msa0815960 | 0.802262 | 6.097526e-49 | -8.615850e-47 |
Msa0662240 | Msa0815960 | 0.808541 | 2.943746e-50 | -8.615850e-47 |
Msa0664600 | Msa0815960 | 0.860928 | 1.467336e-63 | -8.615850e-47 |
Msa0664910 | Msa0815960 | 0.802559 | 5.296149e-49 | -8.615850e-47 |
Msa0682330 | Msa0815960 | 0.817821 | 2.703041e-52 | -8.615850e-47 |
Msa0695270 | Msa0815960 | 0.800530 | 1.380297e-48 | -8.615850e-47 |
Msa0698640 | Msa0815960 | 0.802981 | 4.335131e-49 | -8.615850e-47 |
Msa0701700 | Msa0815960 | 0.831987 | 1.222487e-55 | -8.615850e-47 |
Msa0711430 | Msa0815960 | 0.821082 | 4.878152e-53 | -8.615850e-47 |
Msa0721080 | Msa0815960 | 0.811957 | 5.398518e-51 | -8.615850e-47 |
Msa0724910 | Msa0815960 | 0.802934 | 4.432469e-49 | -8.615850e-47 |
Msa0727640 | Msa0815960 | 0.807399 | 5.152119e-50 | -8.615850e-47 |
Msa0733390 | Msa0815960 | 0.804036 | 2.619833e-49 | -8.615850e-47 |
Msa0736960 | Msa0815960 | 0.894568 | 2.182383e-75 | -8.615850e-47 |
Msa0737570 | Msa0815960 | 0.842874 | 1.980392e-58 | -8.615850e-47 |
Msa0741220 | Msa0815960 | 0.822249 | 2.621295e-53 | -8.615850e-47 |
Msa0742740 | Msa0815960 | 0.801236 | 9.902318e-49 | -8.615850e-47 |
Msa0751260 | Msa0815960 | 0.824760 | 6.778821e-54 | -8.615850e-47 |
Msa0754520 | Msa0815960 | 0.806835 | 6.783439e-50 | -8.615850e-47 |
Msa0770720 | Msa0815960 | 0.808418 | 3.127800e-50 | -8.615850e-47 |
Msa0778590 | Msa0815960 | 0.920682 | 9.392523e-88 | -8.615850e-47 |
Msa0780270 | Msa0815960 | 0.820697 | 5.982829e-53 | -8.615850e-47 |
Msa0783530 | Msa0815960 | 0.805894 | 1.071029e-49 | -8.615850e-47 |
Msa0795070 | Msa0815960 | 0.813280 | 2.773064e-51 | -8.615850e-47 |
Msa0795870 | Msa0815960 | 0.830570 | 2.726072e-55 | -8.615850e-47 |
Msa0815960 | Msa0816710 | 0.805688 | 1.183057e-49 | -8.615850e-47 |
Msa0815960 | Msa0821780 | 0.807028 | 6.172716e-50 | -8.615850e-47 |
Msa0815960 | Msa0823820 | 0.805580 | 1.246487e-49 | -8.615850e-47 |
Msa0815960 | Msa0828560 | 0.816741 | 4.730076e-52 | -8.615850e-47 |
Msa0815960 | Msa0832120 | 0.805929 | 1.052595e-49 | -8.615850e-47 |
Msa0815960 | Msa0833220 | 0.809246 | 2.080807e-50 | -8.615850e-47 |
Msa0815960 | Msa0833650 | 0.830113 | 3.525669e-55 | -8.615850e-47 |
Msa0815960 | Msa0856920 | 0.835139 | 1.996787e-56 | -8.615850e-47 |
Msa0815960 | Msa0861510 | 0.843984 | 1.001098e-58 | -8.615850e-47 |
Msa0815960 | Msa0861530 | 0.839800 | 1.275629e-57 | -8.615850e-47 |
Msa0815960 | Msa0861600 | 0.854915 | 8.952519e-62 | -8.615850e-47 |
Msa0815960 | Msa0863010 | 0.808971 | 2.382353e-50 | -8.615850e-47 |
Msa0815960 | Msa0866520 | 0.867872 | 9.932723e-66 | -8.615850e-47 |
Msa0815960 | Msa0875290 | 0.800753 | 1.243175e-48 | -8.615850e-47 |
Msa0815960 | Msa0945110 | 0.814553 | 1.452747e-51 | -8.615850e-47 |
Msa0815960 | Msa0967870 | 0.843313 | 1.512802e-58 | -8.615850e-47 |
Msa0815960 | Msa1019470 | 0.809620 | 1.729491e-50 | -8.615850e-47 |
Msa0815960 | Msa1020510 | 0.819396 | 1.187344e-52 | -8.615850e-47 |
Msa0815960 | Msa1021210 | 0.821026 | 5.023751e-53 | -8.615850e-47 |
Msa0815960 | Msa1023500 | 0.810807 | 9.591270e-51 | -8.615850e-47 |
Msa0815960 | Msa1023570 | 0.808094 | 3.666869e-50 | -8.615850e-47 |
Msa0815960 | Msa1027990 | 0.815518 | 8.874649e-52 | -8.615850e-47 |
Msa0815960 | Msa1031930 | 0.812723 | 3.672176e-51 | -8.615850e-47 |
Msa0815960 | Msa1038080 | 0.802476 | 5.510809e-49 | -8.615850e-47 |
Msa0815960 | Msa1048920 | 0.801631 | 8.220846e-49 | -8.615850e-47 |
Msa0815960 | Msa1059960 | 0.812670 | 3.772263e-51 | -8.615850e-47 |
Msa0815960 | Msa1072940 | 0.810888 | 9.215040e-51 | -8.615850e-47 |
Msa0815960 | Msa1084950 | 0.815129 | 1.082903e-51 | -8.615850e-47 |
Msa0815960 | Msa1085200 | 0.810187 | 1.305711e-50 | -8.615850e-47 |
Msa0815960 | Msa1085330 | 0.834875 | 2.327443e-56 | -8.615850e-47 |
Msa0815960 | Msa1096960 | 0.837745 | 4.334694e-57 | -8.615850e-47 |
Msa0815960 | Msa1105160 | 0.813281 | 2.771295e-51 | -8.615850e-47 |
Msa0815960 | Msa1125940 | 0.803272 | 3.772953e-49 | -8.615850e-47 |
Msa0815960 | Msa1132840 | 0.823953 | 1.049172e-53 | -8.615850e-47 |
Msa0815960 | Msa1140210 | 0.812129 | 4.952305e-51 | -8.615850e-47 |
Msa0815960 | Msa1140220 | 0.809942 | 1.474351e-50 | -8.615850e-47 |
Msa0815960 | Msa1145810 | 0.816866 | 4.434383e-52 | -8.615850e-47 |
Msa0815960 | Msa1147740 | 0.802949 | 4.400727e-49 | -8.615850e-47 |
Msa0815960 | Msa1155170 | -0.802857 | 4.597931e-49 | -8.615850e-47 |
Msa0815960 | Msa1160920 | 0.828768 | 7.482666e-55 | -8.615850e-47 |
Msa0815960 | Msa1199570 | 0.831155 | 1.959329e-55 | -8.615850e-47 |
Msa0815960 | Msa1208160 | 0.804398 | 2.201802e-49 | -8.615850e-47 |
Msa0815960 | Msa1208430 | 0.803885 | 2.815196e-49 | -8.615850e-47 |
Msa0815960 | Msa1208950 | 0.801138 | 1.037394e-48 | -8.615850e-47 |
Msa0815960 | Msa1209420 | 0.824690 | 7.041515e-54 | -8.615850e-47 |
Msa0815960 | Msa1228200 | 0.830044 | 3.665657e-55 | -8.615850e-47 |
Msa0815960 | Msa1236240 | 0.818939 | 1.508349e-52 | -8.615850e-47 |
Msa0815960 | Msa1238820 | 0.811529 | 6.688520e-51 | -8.615850e-47 |
Msa0815960 | Msa1258340 | 0.804058 | 2.591805e-49 | -8.615850e-47 |
Msa0815960 | Msa1263490 | 0.818665 | 1.741086e-52 | -8.615850e-47 |
Msa0815960 | Msa1265650 | 0.802677 | 5.009383e-49 | -8.615850e-47 |
Msa0815960 | Msa1267770 | 0.808646 | 2.796403e-50 | -8.615850e-47 |
Msa0815960 | Msa1269480 | 0.800423 | 1.451291e-48 | -8.615850e-47 |
Msa0815960 | Msa1276660 | 0.830779 | 2.423331e-55 | -8.615850e-47 |
Msa0815960 | Msa1277220 | 0.844188 | 8.825171e-59 | -8.615850e-47 |
Msa0815960 | Msa1277490 | 0.816910 | 4.333699e-52 | -8.615850e-47 |
Msa0815960 | Msa1297230 | 0.825133 | 5.533616e-54 | -8.615850e-47 |
Msa0815960 | Msa1298370 | 0.823289 | 1.500827e-53 | -8.615850e-47 |
Msa0815960 | Msa1298810 | 0.802949 | 4.400829e-49 | -8.615850e-47 |
Msa0815960 | Msa1303560 | 0.811510 | 6.753989e-51 | -8.615850e-47 |
Msa0815960 | Msa1303650 | 0.805860 | 1.088767e-49 | -8.615850e-47 |
Msa0815960 | Msa1315590 | 0.802339 | 5.879658e-49 | -8.615850e-47 |
Msa0815960 | Msa1328640 | 0.810018 | 1.420016e-50 | -8.615850e-47 |
Msa0815960 | Msa1328710 | 0.827433 | 1.569184e-54 | -8.615850e-47 |
Msa0815960 | Msa1330420 | 0.806903 | 6.562165e-50 | -8.615850e-47 |
Msa0815960 | Msa1330450 | 0.804663 | 1.938960e-49 | -8.615850e-47 |
Msa0815960 | Msa1333480 | 0.814485 | 1.504131e-51 | -8.615850e-47 |
Msa0815960 | Msa1343430 | 0.813690 | 2.252943e-51 | -8.615850e-47 |
Msa0815960 | Msa1348090 | 0.866094 | 3.664657e-65 | -8.615850e-47 |
Msa0815960 | Msa1355450 | 0.833227 | 6.019694e-56 | -8.615850e-47 |
Msa0815960 | Msa1356830 | 0.813509 | 2.469573e-51 | -8.615850e-47 |
Msa0815960 | Msa1366600 | 0.810161 | 1.322422e-50 | -8.615850e-47 |
Msa0815960 | Msa1368430 | 0.803553 | 3.299734e-49 | -8.615850e-47 |
Msa0815960 | Msa1383230 | 0.806697 | 7.252455e-50 | -8.615850e-47 |
Msa0815960 | Msa1387620 | 0.812018 | 5.234894e-51 | -8.615850e-47 |
Msa0815960 | Msa1397400 | 0.813201 | 2.884860e-51 | -8.615850e-47 |
Msa0815960 | Msa1397820 | 0.808558 | 2.919319e-50 | -8.615850e-47 |
Msa0815960 | Msa1415540 | 0.800243 | 1.579445e-48 | -8.615850e-47 |
Msa0815960 | Msa1419520 | 0.828144 | 1.058155e-54 | -8.615850e-47 |
Msa0815960 | Msa1423350 | 0.816417 | 5.591569e-52 | -8.615850e-47 |
Msa0815960 | Msa1425880 | 0.821867 | 3.213155e-53 | -8.615850e-47 |
Msa0815960 | Msa1433810 | 0.857181 | 1.944580e-62 | -8.615850e-47 |
Msa0815960 | Msa1437940 | 0.802647 | 5.079062e-49 | -8.615850e-47 |
Msa0815960 | Msa1440960 | 0.859381 | 4.301515e-63 | -8.615850e-47 |
Msa0815960 | Msa1441580 | 0.810977 | 8.812453e-51 | -8.615850e-47 |
Msa0815960 | Msa1446780 | 0.801670 | 8.068858e-49 | -8.615850e-47 |
Msa0815960 | Msa1449480 | 0.801305 | 9.587380e-49 | -8.615850e-47 |
Msa0815960 | Msa1459460 | 0.805166 | 1.522330e-49 | -8.615850e-47 |
Msa0121090 | Msa0815960 | 0.843260 | 1.562894e-58 | -8.615850e-47 |
Msa0124280 | Msa0815960 | 0.823218 | 1.559287e-53 | -8.615850e-47 |
Msa0136650 | Msa0815960 | 0.825216 | 5.290324e-54 | -8.615850e-47 |
Msa0146740 | Msa0815960 | 0.812327 | 4.483808e-51 | -8.615850e-47 |
Msa0160130 | Msa0815960 | 0.837786 | 4.232109e-57 | -8.615850e-47 |
Msa0173890 | Msa0815960 | 0.818948 | 1.501621e-52 | -8.615850e-47 |
Msa0174450 | Msa0815960 | 0.840563 | 8.064726e-58 | -8.615850e-47 |
Msa0182190 | Msa0815960 | 0.811200 | 7.884263e-51 | -8.615850e-47 |
Msa0182240 | Msa0815960 | 0.802267 | 6.082574e-49 | -8.615850e-47 |
Msa0182360 | Msa0815960 | 0.830507 | 2.824020e-55 | -8.615850e-47 |
Msa0187030 | Msa0815960 | 0.811825 | 5.766379e-51 | -8.615850e-47 |
Msa0212990 | Msa0815960 | 0.802310 | 5.960456e-49 | -8.615850e-47 |
Msa0221000 | Msa0815960 | 0.810956 | 8.904177e-51 | -8.615850e-47 |
Msa0224780 | Msa0815960 | 0.800066 | 1.715813e-48 | -8.615850e-47 |
Msa0225100 | Msa0815960 | 0.849648 | 2.826433e-60 | -8.615850e-47 |
Msa0225460 | Msa0815960 | 0.809449 | 1.882313e-50 | -8.615850e-47 |
Msa0225680 | Msa0815960 | 0.824939 | 6.148728e-54 | -8.615850e-47 |
Msa0225860 | Msa0815960 | 0.831801 | 1.358605e-55 | -8.615850e-47 |
Msa0371170 | Msa0815960 | 0.803087 | 4.120825e-49 | -8.615850e-47 |
Msa0378720 | Msa0815960 | 0.855672 | 5.390947e-62 | -8.615850e-47 |
Msa0380620 | Msa0815960 | 0.825896 | 3.649794e-54 | -8.615850e-47 |
Msa0392510 | Msa0815960 | 0.841142 | 5.685159e-58 | -8.615850e-47 |
Msa0403640 | Msa0815960 | 0.807167 | 5.770482e-50 | -8.615850e-47 |
Msa0406770 | Msa0815960 | 0.821410 | 4.097869e-53 | -8.615850e-47 |
Msa0410650 | Msa0815960 | 0.816273 | 6.022003e-52 | -8.615850e-47 |
Msa0417880 | Msa0815960 | 0.828897 | 6.963980e-55 | -8.615850e-47 |
Msa0425170 | Msa0815960 | 0.810618 | 1.053767e-50 | -8.615850e-47 |
Msa0428370 | Msa0815960 | 0.854444 | 1.226263e-61 | -8.615850e-47 |
Msa0430260 | Msa0815960 | 0.837651 | 4.584132e-57 | -8.615850e-47 |
Msa0436910 | Msa0815960 | 0.808133 | 3.597489e-50 | -8.615850e-47 |
Msa0440440 | Msa0815960 | 0.816448 | 5.501541e-52 | -8.615850e-47 |
Msa0450720 | Msa0815960 | 0.816217 | 6.196594e-52 | -8.615850e-47 |
Msa0464680 | Msa0815960 | 0.820515 | 6.585103e-53 | -8.615850e-47 |
Msa0467430 | Msa0815960 | 0.802176 | 6.352638e-49 | -8.615850e-47 |
Msa0467490 | Msa0815960 | 0.815257 | 1.014481e-51 | -8.615850e-47 |
Msa0472950 | Msa0815960 | 0.825083 | 5.685992e-54 | -8.615850e-47 |
Msa0474730 | Msa0815960 | 0.861204 | 1.209274e-63 | -8.615850e-47 |
Msa0479170 | Msa0815960 | 0.808518 | 2.977315e-50 | -8.615850e-47 |
Msa0244640 | Msa0815960 | 0.815643 | 8.320944e-52 | -8.615850e-47 |
Msa0254790 | Msa0815960 | 0.800830 | 1.199111e-48 | -8.615850e-47 |
Msa0258310 | Msa0815960 | 0.828754 | 7.538840e-55 | -8.615850e-47 |
Msa0259500 | Msa0815960 | 0.800150 | 1.649531e-48 | -8.615850e-47 |
Msa0260510 | Msa0815960 | 0.802612 | 5.164597e-49 | -8.615850e-47 |
Msa0261340 | Msa0815960 | 0.806596 | 7.618663e-50 | -8.615850e-47 |
Msa0266180 | Msa0815960 | 0.836118 | 1.128405e-56 | -8.615850e-47 |
Msa0279690 | Msa0815960 | 0.802214 | 6.237813e-49 | -8.615850e-47 |
Msa0283330 | Msa0815960 | 0.804475 | 2.121735e-49 | -8.615850e-47 |
Msa0287740 | Msa0815960 | 0.840319 | 9.338254e-58 | -8.615850e-47 |
Msa0292400 | Msa0815960 | 0.801183 | 1.015327e-48 | -8.615850e-47 |
Msa0297790 | Msa0815960 | 0.818119 | 2.314952e-52 | -8.615850e-47 |
Msa0300270 | Msa0815960 | 0.831160 | 1.954086e-55 | -8.615850e-47 |
Msa0300320 | Msa0815960 | 0.820946 | 5.241731e-53 | -8.615850e-47 |
Msa0305700 | Msa0815960 | 0.801803 | 7.578247e-49 | -8.615850e-47 |
Msa0307270 | Msa0815960 | 0.820243 | 7.604690e-53 | -8.615850e-47 |
Msa0321620 | Msa0815960 | 0.807607 | 4.653241e-50 | -8.615850e-47 |
Msa0330340 | Msa0815960 | 0.815008 | 1.152099e-51 | -8.615850e-47 |
Msa0335800 | Msa0815960 | 0.803231 | 3.847904e-49 | -8.615850e-47 |
Msa0337700 | Msa0815960 | 0.839045 | 2.003874e-57 | -8.615850e-47 |
Msa0338210 | Msa0815960 | 0.807985 | 3.868674e-50 | -8.615850e-47 |
Msa0340500 | Msa0815960 | 0.811683 | 6.192095e-51 | -8.615850e-47 |
Msa0341540 | Msa0815960 | 0.812902 | 3.356263e-51 | -8.615850e-47 |
Msa0341690 | Msa0815960 | 0.811351 | 7.312717e-51 | -8.615850e-47 |
Msa0358890 | Msa0815960 | 0.809113 | 2.221931e-50 | -8.615850e-47 |
Msa0360210 | Msa0815960 | 0.822342 | 2.494018e-53 | -8.615850e-47 |
Msa0363070 | Msa0815960 | 0.800376 | 1.483913e-48 | -8.615850e-47 |
Msa0363200 | Msa0815960 | 0.856422 | 3.251797e-62 | -8.615850e-47 |
Msa0498060 | Msa0815960 | 0.823779 | 1.152514e-53 | -8.615850e-47 |
Msa0500380 | Msa0815960 | 0.826357 | 2.835952e-54 | -8.615850e-47 |
Msa0507680 | Msa0815960 | 0.810777 | 9.739626e-51 | -8.615850e-47 |
Msa0519830 | Msa0815960 | 0.814791 | 1.287024e-51 | -8.615850e-47 |
Msa0528570 | Msa0815960 | 0.812069 | 5.103048e-51 | -8.615850e-47 |
Msa0532070 | Msa0815960 | 0.821437 | 4.040534e-53 | -8.615850e-47 |
Msa0546500 | Msa0815960 | 0.802225 | 6.205230e-49 | -8.615850e-47 |
Msa0546680 | Msa0815960 | 0.819294 | 1.252786e-52 | -8.615850e-47 |
Msa0548470 | Msa0815960 | 0.814054 | 1.873351e-51 | -8.615850e-47 |
Msa0557070 | Msa0815960 | 0.814621 | 1.403145e-51 | -8.615850e-47 |
Msa0557460 | Msa0815960 | 0.808567 | 2.906126e-50 | -8.615850e-47 |
Msa0565660 | Msa0815960 | 0.810233 | 1.276128e-50 | -8.615850e-47 |
Msa0569200 | Msa0815960 | 0.818268 | 2.142230e-52 | -8.615850e-47 |
Msa0571290 | Msa0815960 | 0.828536 | 8.513632e-55 | -8.615850e-47 |
Msa0573380 | Msa0815960 | 0.803435 | 3.491362e-49 | -8.615850e-47 |
Msa0574390 | Msa0815960 | 0.802312 | 5.956890e-49 | -8.615850e-47 |
Msa0574890 | Msa0815960 | 0.814186 | 1.751178e-51 | -8.615850e-47 |
Msa0579660 | Msa0815960 | 0.802064 | 6.698905e-49 | -8.615850e-47 |
Msa0580370 | Msa0815960 | 0.822292 | 2.560480e-53 | -8.615850e-47 |
Msa0581470 | Msa0815960 | 0.807396 | 5.159569e-50 | -8.615850e-47 |
Msa0585560 | Msa0815960 | 0.803841 | 2.874880e-49 | -8.615850e-47 |
Msa0597790 | Msa0815960 | 0.808657 | 2.781014e-50 | -8.615850e-47 |
PPI
Gene1 | Gene2 | Type |
---|
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
Msa0815960 | MtrunA17_Chr5g0434681 | 96.964 | 988 | 28 | 1 | 1 | 988 | 1 | 986 | 0.0 | 1947 |
Msa0815960 | MtrunA17_Chr8g0376151 | 48.357 | 426 | 175 | 10 | 570 | 971 | 550 | 954 | 2.35e-87 | 301 |
Msa0815960 | MtrunA17_Chr1g0184441 | 35.264 | 397 | 221 | 12 | 580 | 967 | 495 | 864 | 8.27e-40 | 159 |
Msa0815960 | MtrunA17_Chr1g0184441 | 48.387 | 93 | 47 | 1 | 21 | 113 | 24 | 115 | 2.39e-22 | 103 |
Msa0815960 | MtrunA17_Chr7g0274311 | 34.336 | 399 | 215 | 14 | 580 | 967 | 504 | 866 | 1.43e-34 | 142 |
Msa0815960 | MtrunA17_Chr7g0274311 | 48.485 | 99 | 50 | 1 | 15 | 113 | 20 | 117 | 1.90e-25 | 113 |
Msa0815960 | MtrunA17_Chr3g0093241 | 30.851 | 188 | 109 | 4 | 1 | 169 | 1 | 186 | 5.23e-26 | 113 |
Msa0815960 | MtrunA17_Chr3g0093241 | 61.616 | 99 | 38 | 0 | 619 | 717 | 331 | 429 | 4.51e-23 | 104 |
Msa0815960 | MtrunA17_Chr4g0059771 | 36.667 | 120 | 76 | 0 | 1 | 120 | 1 | 120 | 6.24e-25 | 110 |
Msa0815960 | MtrunA17_Chr4g0059771 | 48.611 | 144 | 68 | 3 | 574 | 717 | 290 | 427 | 2.07e-16 | 83.6 |
Msa0815960 | MtrunA17_Chr4g0003901 | 49.485 | 97 | 49 | 0 | 619 | 715 | 286 | 382 | 3.54e-16 | 82.4 |
Msa0815960 | MtrunA17_Chr4g0003911 | 48.352 | 91 | 47 | 0 | 626 | 716 | 281 | 371 | 6.36e-16 | 82.4 |
Msa0815960 | MtrunA17_Chr1g0176391 | 28.191 | 376 | 201 | 13 | 622 | 958 | 65 | 410 | 1.80e-14 | 77.4 |
Msa0815960 | MtrunA17_Chr4g0049631 | 35.780 | 109 | 70 | 0 | 622 | 730 | 303 | 411 | 2.22e-14 | 77.0 |
Msa0815960 | MtrunA17_Chr7g0268041 | 37.097 | 124 | 75 | 1 | 602 | 725 | 53 | 173 | 2.76e-14 | 76.6 |
Msa0815960 | MtrunA17_Chr2g0307041 | 41.053 | 95 | 56 | 0 | 625 | 719 | 22 | 116 | 4.06e-14 | 75.5 |
Msa0815960 | MtrunA17_Chr4g0073651 | 40.952 | 105 | 62 | 0 | 619 | 723 | 6 | 110 | 2.46e-12 | 70.5 |
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
Msa0815960 | AT5G16720.1 | 46.212 | 396 | 170 | 7 | 572 | 966 | 310 | 663 | 6.37e-87 | 293 |
Msa0815960 | AT5G16720.1 | 38.214 | 280 | 117 | 10 | 1 | 259 | 1 | 245 | 3.55e-46 | 177 |
Msa0815960 | AT1G70750.1 | 47.453 | 373 | 155 | 11 | 601 | 966 | 400 | 738 | 2.08e-72 | 255 |
Msa0815960 | AT1G70750.1 | 53.509 | 114 | 44 | 2 | 1 | 107 | 1 | 112 | 3.30e-30 | 129 |
Msa0815960 | AT1G08800.2 | 45.763 | 177 | 86 | 5 | 581 | 755 | 858 | 1026 | 5.61e-30 | 129 |
Msa0815960 | AT1G08800.2 | 38.158 | 152 | 81 | 5 | 21 | 165 | 10 | 155 | 4.14e-23 | 107 |
Msa0815960 | AT1G08800.4 | 45.763 | 177 | 86 | 5 | 581 | 755 | 858 | 1026 | 5.61e-30 | 129 |
Msa0815960 | AT1G08800.4 | 38.158 | 152 | 81 | 5 | 21 | 165 | 10 | 155 | 4.14e-23 | 107 |
Msa0815960 | AT1G08800.3 | 45.763 | 177 | 86 | 5 | 581 | 755 | 858 | 1026 | 5.61e-30 | 129 |
Msa0815960 | AT1G08800.3 | 38.158 | 152 | 81 | 5 | 21 | 165 | 10 | 155 | 4.14e-23 | 107 |
Msa0815960 | AT1G08800.1 | 45.763 | 177 | 86 | 5 | 581 | 755 | 858 | 1026 | 5.61e-30 | 129 |
Msa0815960 | AT1G08800.1 | 38.158 | 152 | 81 | 5 | 21 | 165 | 10 | 155 | 4.14e-23 | 107 |
Msa0815960 | AT1G74830.1 | 40.000 | 210 | 118 | 2 | 619 | 828 | 302 | 503 | 2.11e-26 | 115 |
Msa0815960 | AT1G74830.1 | 36.283 | 113 | 72 | 0 | 1 | 113 | 20 | 132 | 6.83e-24 | 107 |
Msa0815960 | AT1G18990.1 | 58.559 | 111 | 44 | 1 | 605 | 715 | 289 | 397 | 1.31e-21 | 100 |
Msa0815960 | AT1G18990.1 | 31.720 | 186 | 97 | 3 | 1 | 156 | 1 | 186 | 6.37e-18 | 89.0 |
Msa0815960 | AT2G30690.1 | 32.099 | 162 | 87 | 7 | 15 | 169 | 13 | 158 | 1.08e-17 | 89.0 |
Msa0815960 | AT2G30690.2 | 32.099 | 162 | 87 | 7 | 15 | 169 | 13 | 158 | 1.08e-17 | 89.0 |
Msa0815960 | AT4G13630.2 | 41.135 | 141 | 69 | 3 | 586 | 722 | 195 | 325 | 1.32e-17 | 88.2 |
Msa0815960 | AT4G13630.1 | 41.135 | 141 | 69 | 3 | 586 | 722 | 195 | 325 | 1.32e-17 | 88.2 |
Msa0815960 | AT5G06560.1 | 40.000 | 100 | 60 | 0 | 622 | 721 | 74 | 173 | 7.02e-16 | 82.4 |
Msa0815960 | AT3G54740.3 | 39.604 | 101 | 61 | 0 | 625 | 725 | 77 | 177 | 2.49e-15 | 80.1 |
Msa0815960 | AT3G54740.6 | 39.604 | 101 | 61 | 0 | 625 | 725 | 77 | 177 | 2.49e-15 | 80.1 |
Msa0815960 | AT3G54740.2 | 39.604 | 101 | 61 | 0 | 625 | 725 | 77 | 177 | 2.49e-15 | 80.1 |
Msa0815960 | AT3G54740.5 | 39.604 | 101 | 61 | 0 | 625 | 725 | 77 | 177 | 2.49e-15 | 80.1 |
Msa0815960 | AT3G54740.8 | 39.604 | 101 | 61 | 0 | 625 | 725 | 29 | 129 | 3.00e-15 | 79.3 |
Msa0815960 | AT3G54740.1 | 39.604 | 101 | 61 | 0 | 625 | 725 | 29 | 129 | 3.00e-15 | 79.3 |
Msa0815960 | AT3G54740.7 | 39.604 | 101 | 61 | 0 | 625 | 725 | 29 | 129 | 3.00e-15 | 79.3 |
Msa0815960 | AT3G54740.4 | 39.604 | 101 | 61 | 0 | 625 | 725 | 29 | 129 | 3.00e-15 | 79.3 |
Msa0815960 | AT1G04890.1 | 42.969 | 128 | 70 | 2 | 591 | 716 | 82 | 208 | 3.51e-14 | 76.3 |
Msa0815960 | AT4G13160.1 | 47.872 | 94 | 49 | 0 | 622 | 715 | 117 | 210 | 1.82e-13 | 72.4 |
Find 156 sgRNAs with CRISPR-Local
Find 533 sgRNAs with CRISPR-GE
CRISPR-Local
sgRNA_sequence | on_target_score | Position | Region |
---|---|---|---|
CTTATCTGTTGAAGCCTTCT+TGG | 0.160198 | 5_3:+49714648 | Msa0815960:CDS |
TTGATAGTAATTACATTTAA+AGG | 0.199625 | 5_3:+49721490 | Msa0815960:three_prime_UTR |
TTGATAGTAATTACATTTAA+AGG | 0.199625 | 5_3:+49723575 | Msa0815960:three_prime_UTR |
GTGAAAATTGCTTGGCTTCT+AGG | 0.206836 | 5_3:+49714474 | Msa0815960:CDS |
CTTGTTCTTCCATCATTCTT+TGG | 0.217588 | 5_3:-49716872 | None:intergenic |
AAGCAACCAATTGTTCTTCT+TGG | 0.220911 | 5_3:-49717404 | None:intergenic |
ACAAAATTTGCCAAATGTTT+TGG | 0.233461 | 5_3:+49714287 | Msa0815960:CDS |
ACAGATAAGGAGGGTAAATT+TGG | 0.246430 | 5_3:-49714634 | None:intergenic |
TGTTTACCTTGTGCATTATC+TGG | 0.252484 | 5_3:-49715379 | None:intergenic |
TCTGCTGACCTAGGAGTTTC+AGG | 0.253809 | 5_3:-49716561 | None:intergenic |
CTTACGTTCCTTGATAGTTT+TGG | 0.261438 | 5_3:+49721330 | Msa0815960:three_prime_UTR |
ATCCGACAATGACAGAAATT+TGG | 0.280174 | 5_3:+49715696 | Msa0815960:CDS |
CAGAAATTTGGAAGCAGATA+TGG | 0.283479 | 5_3:+49715708 | Msa0815960:CDS |
TTCTCTGCTTCATCTAAATA+TGG | 0.289720 | 5_3:-49717443 | None:intergenic |
CAATGTGAAACCTGCATAAT+AGG | 0.290320 | 5_3:-49714977 | None:intergenic |
ATAGAATCTATTAGCTTAAC+AGG | 0.302400 | 5_3:-49715073 | None:intergenic |
CATGAGAAACATGATGAAAA+TGG | 0.306053 | 5_3:+49714566 | Msa0815960:CDS |
GATGGAGCTTGAAGAAAGTT+TGG | 0.320863 | 5_3:+49715258 | Msa0815960:CDS |
AGAATTTCTCCAACATTGTA+TGG | 0.334868 | 5_3:+49717637 | Msa0815960:CDS |
ATCACTTGAAATCATCAATA+TGG | 0.336778 | 5_3:+49715009 | Msa0815960:CDS |
ACAAAAGAACCAGCATAGTT+TGG | 0.348321 | 5_3:+49714124 | Msa0815960:five_prime_UTR |
AGAGGAAGTATTGATCAAAA+TGG | 0.367658 | 5_3:+49715210 | Msa0815960:CDS |
TAGTGTATGCATTTCTTGAA+TGG | 0.368218 | 5_3:+49714216 | Msa0815960:CDS |
AGAAGGAATTGGAAGAGTAT+AGG | 0.372537 | 5_3:+49716970 | Msa0815960:CDS |
TGATGATACCGTTTCTAACT+TGG | 0.372874 | 5_3:+49717163 | Msa0815960:CDS |
CTATCCATTTCACTTATCAT+AGG | 0.373876 | 5_3:-49717545 | None:intergenic |
GAAGGAATTGGAAGAGTATA+GGG | 0.377022 | 5_3:+49716971 | Msa0815960:CDS |
AGAGGAAAAGATAATTTCAT+TGG | 0.377885 | 5_3:+49717289 | Msa0815960:CDS |
TGAATTACGCCTTAAGAACT+TGG | 0.379118 | 5_3:+49717739 | Msa0815960:CDS |
GCAAGAACTTGAGAAGGAAT+TGG | 0.385367 | 5_3:+49716959 | Msa0815960:CDS |
CACAAAGAAGACTATTCTAA+TGG | 0.388166 | 5_3:+49717359 | Msa0815960:CDS |
AAAATGGAGAGAGTTTAAAT+AGG | 0.391672 | 5_3:+49714582 | Msa0815960:CDS |
GTAGTTCAAATTTCTGTGAA+TGG | 0.392563 | 5_3:+49715325 | Msa0815960:CDS |
CATGAAACTGAAAACTCATT+TGG | 0.392989 | 5_3:+49714506 | Msa0815960:CDS |
AGATCAACTCAAAGCATTAG+AGG | 0.392996 | 5_3:+49717271 | Msa0815960:CDS |
GATCATTGTCCAAGTTCTTA+AGG | 0.394095 | 5_3:-49717748 | None:intergenic |
TTGTAATCATTGCCATTGTT+TGG | 0.398108 | 5_3:-49716803 | None:intergenic |
TTCCAAATTTCTGTCATTGT+CGG | 0.401114 | 5_3:-49715698 | None:intergenic |
AAACTTGAACTCTGATGAAA+AGG | 0.403932 | 5_3:+49714883 | Msa0815960:CDS |
TGTATGGGATCCATACAAAA+TGG | 0.406925 | 5_3:+49717653 | Msa0815960:CDS |
TTCTGATGCTCCTATTATGC+AGG | 0.413743 | 5_3:+49714967 | Msa0815960:CDS |
CTCTTTGAGAAAACAGAATC+AGG | 0.416556 | 5_3:+49716615 | Msa0815960:CDS |
AGTTCCTATGATAAGTGAAA+TGG | 0.425926 | 5_3:+49717541 | Msa0815960:CDS |
TCTATATCTTTAGAAGTTGA+AGG | 0.427647 | 5_3:+49715286 | Msa0815960:CDS |
AAGAAGAACAATTGGTTGCT+TGG | 0.429766 | 5_3:+49717406 | Msa0815960:CDS |
ACGCTTGATTGCGGTTCAAT+CGG | 0.430956 | 5_3:-49715181 | None:intergenic |
ATTTGCATTTGATAGAGAAT+TGG | 0.437319 | 5_3:+49717484 | Msa0815960:CDS |
TATTAACCGTTCAACGTCAA+TGG | 0.441249 | 5_3:-49715050 | None:intergenic |
GTTAGAAACGGTATCATCAT+TGG | 0.443026 | 5_3:-49717159 | None:intergenic |
TGCACACAAGAAGATGAATC+TGG | 0.444733 | 5_3:+49715589 | Msa0815960:CDS |
TAGTACTTTAGAAGAATTTG+AGG | 0.444834 | 5_3:+49717229 | Msa0815960:CDS |
CAGTGTAAATGATAATGAAA+TGG | 0.445770 | 5_3:+49716443 | Msa0815960:CDS |
AGCCGGTCGATTGTTAAAAC+CGG | 0.449648 | 5_3:-49716690 | None:intergenic |
TGAGGATCTAGAGGAGGAGA+AGG | 0.452240 | 5_3:+49715129 | Msa0815960:CDS |
TTGAAGCCTTCTTGGTATGA+TGG | 0.459164 | 5_3:+49714656 | Msa0815960:CDS |
TGGTTTAAGACCAAAACATT+TGG | 0.460628 | 5_3:-49714297 | None:intergenic |
TTCACCAAGCAAAGACTTGT+AGG | 0.462618 | 5_3:+49717793 | Msa0815960:CDS |
CAATCTCCAAGAAGAACAAT+TGG | 0.464940 | 5_3:+49717398 | Msa0815960:CDS |
AGCAAAGACTTGTAGGCATA+AGG | 0.466944 | 5_3:+49717800 | Msa0815960:exon |
AAGATAATTTCATTGGAAGA+TGG | 0.470072 | 5_3:+49717296 | Msa0815960:CDS |
CGGTTCAATCGGTGACTCAC+TGG | 0.470776 | 5_3:-49715170 | None:intergenic |
TGAATCATGCAAATTGAATG+AGG | 0.474317 | 5_3:+49715111 | Msa0815960:CDS |
GATGAGAGTTCATCAAGATA+TGG | 0.474936 | 5_3:+49717332 | Msa0815960:CDS |
AGCACTGAGAGCTCTTTGTT+CGG | 0.478445 | 5_3:-49716730 | None:intergenic |
TATGCCTACAAGTCTTTGCT+TGG | 0.481502 | 5_3:-49717797 | None:intergenic |
AACTGAACTCGATCGATCCT+CGG | 0.488164 | 5_3:-49714858 | None:intergenic |
CAAGAAGGCTTCAACAGATA+AGG | 0.490047 | 5_3:-49714647 | None:intergenic |
ACTCATTTGGTATGAGACAT+AGG | 0.495233 | 5_3:+49714519 | Msa0815960:CDS |
AGAAGAACATGATCATGATC+AGG | 0.495368 | 5_3:+49714769 | Msa0815960:CDS |
TACAAGGCTGCAGGAAGAAA+AGG | 0.495890 | 5_3:+49716821 | Msa0815960:CDS |
TGAATGCAACTTAACTATAG+TGG | 0.498253 | 5_3:-49717774 | None:intergenic |
GAGTAGGTTGGTTCTTCAGA+TGG | 0.507610 | 5_3:-49716171 | None:intergenic |
ATGTTGAGAAGAATGAAAGA+TGG | 0.509499 | 5_3:+49717032 | Msa0815960:CDS |
ATAAACTTCCTGAAACTCCT+AGG | 0.514133 | 5_3:+49716553 | Msa0815960:CDS |
TCTTGTTCTTGTTGCAACAC+CGG | 0.514596 | 5_3:+49717077 | Msa0815960:CDS |
GGCAATGATTACAAGGCTGC+AGG | 0.518083 | 5_3:+49716812 | Msa0815960:CDS |
AGGTTGATCGCGTTTATGAC+AGG | 0.518142 | 5_3:+49717591 | Msa0815960:CDS |
TGATACCGTTTCTAACTTGG+AGG | 0.518834 | 5_3:+49717166 | Msa0815960:CDS |
CTAAAACCGTTGCTTTACCA+TGG | 0.519066 | 5_3:-49721450 | None:intergenic |
ATACAAAATGGTGGTGATGA+AGG | 0.519176 | 5_3:+49717665 | Msa0815960:CDS |
TAAAACCGTTACTTTACCAT+GGG | 0.525914 | 5_3:-49723534 | None:intergenic |
TGCATTATCTGGTTCTTCTG+TGG | 0.527662 | 5_3:-49715368 | None:intergenic |
TGACAGTTCATCGGTGTAGC+CGG | 0.531224 | 5_3:-49717096 | None:intergenic |
CTAAAACCGTTACTTTACCA+TGG | 0.532980 | 5_3:-49723535 | None:intergenic |
TAAAACCGTTGCTTTACCAT+GGG | 0.534606 | 5_3:-49721449 | None:intergenic |
AGAAAAGGCGGCAATGCAGA+TGG | 0.535335 | 5_3:+49716836 | Msa0815960:CDS |
CATTTCATTATCATTTACAC+TGG | 0.540128 | 5_3:-49716442 | None:intergenic |
CCATCAATCATCAAAATGCT+CGG | 0.540613 | 5_3:+49716509 | Msa0815960:CDS |
CTATATCTTTAGAAGTTGAA+GGG | 0.544204 | 5_3:+49715287 | Msa0815960:CDS |
GTATGGATCCCATACAATGT+TGG | 0.545411 | 5_3:-49717646 | None:intergenic |
AGCCCACTCCAAAACTATCA+AGG | 0.549519 | 5_3:-49721338 | None:intergenic |
TGCAGAGAAAACAAACATGA+TGG | 0.549690 | 5_3:+49715240 | Msa0815960:CDS |
AGAGAAGCAAGAACTTGAGA+AGG | 0.550787 | 5_3:+49716953 | Msa0815960:CDS |
GAAAGTGTGTATTGAAGAAG+AGG | 0.550976 | 5_3:+49717571 | Msa0815960:CDS |
TCAATAGAAGATGACAAAGA+AGG | 0.551727 | 5_3:+49714713 | Msa0815960:CDS |
AAATGGTGGTGATGAAGGAA+AGG | 0.555471 | 5_3:+49717670 | Msa0815960:CDS |
GGATGGTAGCGTTGCAAGTG+AGG | 0.560662 | 5_3:+49716653 | Msa0815960:CDS |
ATTGAATTTGAGATAAACAA+TGG | 0.561453 | 5_3:+49714746 | Msa0815960:CDS |
GATGGAAACTATTTAAGCAA+AGG | 0.562706 | 5_3:+49714674 | Msa0815960:CDS |
TATTCTCAGAGAGGTGGCCG+AGG | 0.563232 | 5_3:+49714841 | Msa0815960:CDS |
ATTACAATACCAAAGAATGA+TGG | 0.564697 | 5_3:+49716863 | Msa0815960:CDS |
GAATTTCTCCAACATTGTAT+GGG | 0.568122 | 5_3:+49717638 | Msa0815960:CDS |
ACAAAGCCATTGACGTTGAA+CGG | 0.568420 | 5_3:+49715044 | Msa0815960:CDS |
ATAAAATCATCAACAGCACT+TGG | 0.569946 | 5_3:-49714935 | None:intergenic |
TTTGGTATGAGACATAGGAT+TGG | 0.570047 | 5_3:+49714524 | Msa0815960:CDS |
TGAGGTAGAATACAGCGATC+CGG | 0.570543 | 5_3:+49716671 | Msa0815960:CDS |
TATCTCCTCCAAGTTAGAAA+CGG | 0.572085 | 5_3:-49717171 | None:intergenic |
TAGTTTCCATCATACCAAGA+AGG | 0.574251 | 5_3:-49714662 | None:intergenic |
TGCAACTTAACTATAGTGGA+TGG | 0.575938 | 5_3:-49717770 | None:intergenic |
TAGCATGTGTGAAAATTGCT+TGG | 0.580838 | 5_3:+49714466 | Msa0815960:CDS |
CAAATTGAATGAGGATCTAG+AGG | 0.582974 | 5_3:+49715120 | Msa0815960:CDS |
TGACATGCATTGACTTGAGT+AGG | 0.583561 | 5_3:-49716187 | None:intergenic |
GCAGCTGAGATTTCAAACCT+TGG | 0.585082 | 5_3:+49714407 | Msa0815960:CDS |
GAAGGCTTCAACAGATAAGG+AGG | 0.588495 | 5_3:-49714644 | None:intergenic |
ATCAAGGAACGTAAGTTGCA+TGG | 0.588658 | 5_3:-49721322 | None:intergenic |
GCAATCAAGCGTCTTAGAAG+AGG | 0.588801 | 5_3:+49715192 | Msa0815960:CDS |
AAACAATGGCAATGATTACA+AGG | 0.589570 | 5_3:+49716805 | Msa0815960:CDS |
ACTTGCAACGCTACCATCCA+CGG | 0.593320 | 5_3:-49716649 | None:intergenic |
TTCAAACTCTTAGCACTCAA+AGG | 0.593842 | 5_3:+49721409 | Msa0815960:three_prime_UTR |
TTCAAACTCTTAGCACTCAA+AGG | 0.593842 | 5_3:+49723494 | Msa0815960:three_prime_UTR |
TGATCATGATCAGGATGAAG+AGG | 0.593848 | 5_3:+49714778 | Msa0815960:CDS |
TTGGTTAGTAGCTATTGCTG+AGG | 0.595521 | 5_3:-49716784 | None:intergenic |
ATGCATTGACTTGAGTAGGT+TGG | 0.596080 | 5_3:-49716183 | None:intergenic |
GTTGGTGTTTCTATGTAACA+TGG | 0.600046 | 5_3:-49714177 | None:intergenic |
AAGATCAACTGACAGTTCAT+CGG | 0.602771 | 5_3:-49717105 | None:intergenic |
GATGATTAGAGCAGTAGCCA+AGG | 0.602881 | 5_3:-49714424 | None:intergenic |
TCTTCTAAGACGCTTGATTG+CGG | 0.606157 | 5_3:-49715190 | None:intergenic |
TAGGTTGGTTCTTCAGATGG+AGG | 0.608490 | 5_3:-49716168 | None:intergenic |
TGCATTGCATCTGCTGACCT+AGG | 0.622751 | 5_3:-49716570 | None:intergenic |
ATAGTAATTACATTTAAAGG+AGG | 0.627026 | 5_3:+49721493 | Msa0815960:three_prime_UTR |
ATAGTAATTACATTTAAAGG+AGG | 0.627026 | 5_3:+49723578 | Msa0815960:three_prime_UTR |
TGTTTCTCATGACTTAACCA+TGG | 0.628154 | 5_3:-49714554 | None:intergenic |
GGAGCAGAAGAATCCGTGGA+TGG | 0.629443 | 5_3:+49716636 | Msa0815960:CDS |
TGTATCCCATGGTAAAGTAA+CGG | 0.632044 | 5_3:+49723529 | Msa0815960:three_prime_UTR |
ATGCAATGCACTACATGCAG+AGG | 0.632820 | 5_3:+49716583 | Msa0815960:CDS |
ATCAGGAGCAGAAGAATCCG+TGG | 0.633581 | 5_3:+49716632 | Msa0815960:CDS |
CATGGGATACATCTGACCGT+TGG | 0.640318 | 5_3:-49721432 | None:intergenic |
CATGGGATACATCTGACCGT+TGG | 0.640318 | 5_3:-49723517 | None:intergenic |
AATAGCTACTAACCAAACAA+TGG | 0.642191 | 5_3:+49716791 | Msa0815960:CDS |
AGATTCACTAGCTCATCAAG+TGG | 0.654889 | 5_3:+49721363 | Msa0815960:three_prime_UTR |
AGATTCACTAGCTCATCAAG+TGG | 0.654889 | 5_3:+49723448 | Msa0815960:three_prime_UTR |
ATCTTCTTCAAGTGACAGTG+AGG | 0.656914 | 5_3:+49716218 | Msa0815960:CDS |
TGGATCAAGTGATGATGATG+AGG | 0.658998 | 5_3:+49715609 | Msa0815960:CDS |
TGTATCCCATGGTAAAGCAA+CGG | 0.659132 | 5_3:+49721444 | Msa0815960:three_prime_UTR |
CAACGGTCAGATGTATCCCA+TGG | 0.659514 | 5_3:+49721433 | Msa0815960:three_prime_UTR |
CAACGGTCAGATGTATCCCA+TGG | 0.659514 | 5_3:+49723518 | Msa0815960:three_prime_UTR |
ATTGAATGAGGATCTAGAGG+AGG | 0.663122 | 5_3:+49715123 | Msa0815960:CDS |
GAACAAGAAAATGCTCCACC+AGG | 0.665638 | 5_3:+49715733 | Msa0815960:CDS |
AAGGCTTCAACAGATAAGGA+GGG | 0.667591 | 5_3:-49714643 | None:intergenic |
AAGGCTGCAGGAAGAAAAGG+CGG | 0.674245 | 5_3:+49716824 | Msa0815960:CDS |
AGCCTTGAACAGAAAAGACA+AGG | 0.674692 | 5_3:-49714320 | None:intergenic |
TCTTAGCACTCAAAGGCCAA+CGG | 0.674974 | 5_3:+49721416 | Msa0815960:three_prime_UTR |
TCTTAGCACTCAAAGGCCAA+CGG | 0.674974 | 5_3:+49723501 | Msa0815960:three_prime_UTR |
GAAGAACCAGATAATGCACA+AGG | 0.705101 | 5_3:+49715373 | Msa0815960:CDS |
CTTGAACAGAAAAGACAAGG+TGG | 0.722462 | 5_3:-49714317 | None:intergenic |
ATGGGATCCATACAAAATGG+TGG | 0.735054 | 5_3:+49717656 | Msa0815960:CDS |
CRISPR-GE
badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
---|---|---|---|---|---|
!! | TTATTTAATAAATAAAAATA+TGG | - | chr5_3:49718189-49718208 | None:intergenic | 0.0% |
!!! | TATTTTTATTTATTAAATAA+AGG | + | chr5_3:49718189-49718208 | Msa0815960:intron | 0.0% |
!!! | ATTTTTATTTATTAAATAAA+GGG | + | chr5_3:49718190-49718209 | Msa0815960:intron | 0.0% |
!! | ATATTTATATATCAATGATT+AGG | + | chr5_3:49718728-49718747 | Msa0815960:intron | 10.0% |
!!! | TTTTTATTTATTATTACAAC+AGG | - | chr5_3:49718831-49718850 | None:intergenic | 10.0% |
!! | AACAAAAAATTAAAAGAAAA+TGG | + | chr5_3:49718953-49718972 | Msa0815960:intron | 10.0% |
!!! | AGTTACTATTTTAATTTATT+AGG | + | chr5_3:49719659-49719678 | Msa0815960:intron | 10.0% |
!!! | GTTACTATTTTAATTTATTA+GGG | + | chr5_3:49719660-49719679 | Msa0815960:intron | 10.0% |
!! | AAAAAAATATCCAAAAAAAA+AGG | + | chr5_3:49720082-49720101 | Msa0815960:intron | 10.0% |
!! | AAAAAATATCCAAAAAAAAA+GGG | + | chr5_3:49720083-49720102 | Msa0815960:intron | 10.0% |
!!! | AGTTACTATTTTAATTTATT+AGG | + | chr5_3:49719659-49719678 | Msa0815960:intron | 10.0% |
!!! | GTTACTATTTTAATTTATTA+GGG | + | chr5_3:49719660-49719679 | Msa0815960:intron | 10.0% |
!! | AAAAAAATATCCAAAAAAAA+AGG | + | chr5_3:49720082-49720101 | Msa0815960:intron | 10.0% |
!! | AAAAAATATCCAAAAAAAAA+GGG | + | chr5_3:49720083-49720102 | Msa0815960:intron | 10.0% |
!! | TTTCATTTCAACAAATATAA+AGG | + | chr5_3:49718219-49718238 | Msa0815960:intron | 15.0% |
!! | ATGCTAAGATTAAAAAAAAA+AGG | - | chr5_3:49718261-49718280 | None:intergenic | 15.0% |
!! | AATGAAAATGAAATATTTCA+TGG | + | chr5_3:49718980-49718999 | Msa0815960:intron | 15.0% |
!!! | TTGATAGTAATTACATTTAA+AGG | + | chr5_3:49719406-49719425 | Msa0815960:intron | 15.0% |
!!! | TTTATTAGGATTTTATTTTC+AGG | + | chr5_3:49719594-49719613 | Msa0815960:intron | 15.0% |
!!! | TAGTAACTAGTTTTATTTTT+GGG | - | chr5_3:49719647-49719666 | None:intergenic | 15.0% |
!!! | ATAGTAACTAGTTTTATTTT+TGG | - | chr5_3:49719648-49719667 | None:intergenic | 15.0% |
!!! | ATTTTCTTAAATGTATTTCA+TGG | + | chr5_3:49720173-49720192 | Msa0815960:intron | 15.0% |
!!! | AAATAAAAAATCTCTTGTTT+TGG | - | chr5_3:49720478-49720497 | None:intergenic | 15.0% |
!!! | AAAACAAGAGATTTTTTATT+TGG | + | chr5_3:49720477-49720496 | Msa0815960:intron | 15.0% |
!!! | AAACAAGAGATTTTTTATTT+GGG | + | chr5_3:49720478-49720497 | Msa0815960:intron | 15.0% |
!! | AAAATAAAGAGAAAAATGTT+GGG | + | chr5_3:49720826-49720845 | Msa0815960:intron | 15.0% |
!!! | TTGATAGTAATTACATTTAA+AGG | + | chr5_3:49719406-49719425 | Msa0815960:intron | 15.0% |
!!! | TTTATTAGGATTTTATTTTC+AGG | + | chr5_3:49719594-49719613 | Msa0815960:intron | 15.0% |
!!! | TAGTAACTAGTTTTATTTTT+GGG | - | chr5_3:49719647-49719666 | None:intergenic | 15.0% |
!!! | ATAGTAACTAGTTTTATTTT+TGG | - | chr5_3:49719648-49719667 | None:intergenic | 15.0% |
!!! | ATTTTCTTAAATGTATTTCA+TGG | + | chr5_3:49720173-49720192 | Msa0815960:intron | 15.0% |
!!! | AAATAAAAAATCTCTTGTTT+TGG | - | chr5_3:49720478-49720497 | None:intergenic | 15.0% |
!!! | AAAACAAGAGATTTTTTATT+TGG | + | chr5_3:49720477-49720496 | Msa0815960:intron | 15.0% |
!!! | AAACAAGAGATTTTTTATTT+GGG | + | chr5_3:49720478-49720497 | Msa0815960:intron | 15.0% |
!! | AAAATAAAGAGAAAAATGTT+GGG | + | chr5_3:49720826-49720845 | Msa0815960:intron | 15.0% |
!!! | TTGATAGTAATTACATTTAA+AGG | + | chr5_3:49719406-49719425 | Msa0815960:intron | 15.0% |
!!! | TTGTTTGATATTATGGTTTT+AGG | - | chr5_3:49714108-49714127 | None:intergenic | 20.0% |
!!! | TAGAATTACAACTATTTTGT+TGG | - | chr5_3:49714198-49714217 | None:intergenic | 20.0% |
!!! | ATTGAATTTGAGATAAACAA+TGG | + | chr5_3:49714746-49714765 | Msa0815960:CDS | 20.0% |
!! | GAATGATCATATTAGATATA+TGG | + | chr5_3:49715489-49715508 | Msa0815960:intron | 20.0% |
!! | TTATGAAATTTGCAAATTCT+TGG | + | chr5_3:49715515-49715534 | Msa0815960:intron | 20.0% |
!! | AGTTTAGATAGATTGAAAAA+AGG | - | chr5_3:49716388-49716407 | None:intergenic | 20.0% |
!!! | TCATTTTTTGCAACAAAATT+TGG | - | chr5_3:49718421-49718440 | None:intergenic | 20.0% |
!! | TTTATATATCAATGATTAGG+TGG | + | chr5_3:49718731-49718750 | Msa0815960:intron | 20.0% |
!! | TTCAATATTTCATCTTTGTT+TGG | + | chr5_3:49719188-49719207 | Msa0815960:intron | 20.0% |
!!! | AAGGTTGATATTTCAATAAT+AGG | + | chr5_3:49719214-49719233 | Msa0815960:intron | 20.0% |
!! | ATAGTAATTACATTTAAAGG+AGG | + | chr5_3:49719409-49719428 | Msa0815960:intron | 20.0% |
!!! | AGCAATTTTAGAATTTGTTT+GGG | + | chr5_3:49719440-49719459 | Msa0815960:intron | 20.0% |
!! | AAGCAATAAAATTGTTCTTT+GGG | - | chr5_3:49719516-49719535 | None:intergenic | 20.0% |
!! | AAAGCAATAAAATTGTTCTT+TGG | - | chr5_3:49719517-49719536 | None:intergenic | 20.0% |
!! | TGATTGTCTTATATGAAATT+AGG | + | chr5_3:49719560-49719579 | Msa0815960:intron | 20.0% |
!! | TCTTATATGAAATTAGGAAA+TGG | + | chr5_3:49719566-49719585 | Msa0815960:intron | 20.0% |
!!! | TTTTTTTCACCCTTTTTTTT+TGG | - | chr5_3:49720095-49720114 | None:intergenic | 20.0% |
!!! | GAAAATAATTTTCTTTTGCT+TGG | - | chr5_3:49720202-49720221 | None:intergenic | 20.0% |
!! | TGTTCATTGATAGAAAATAT+TGG | + | chr5_3:49720259-49720278 | Msa0815960:intron | 20.0% |
!! | TAGAAAATATTGGATCAATA+TGG | + | chr5_3:49720269-49720288 | Msa0815960:intron | 20.0% |
!! | TCAAGACTATAAAGAATATA+TGG | - | chr5_3:49720348-49720367 | None:intergenic | 20.0% |
!!! | ATATATTCTTTATAGTCTTG+AGG | + | chr5_3:49720347-49720366 | Msa0815960:intron | 20.0% |
!!! | GTTATGATCAAATTTTGAAA+AGG | + | chr5_3:49720604-49720623 | Msa0815960:intron | 20.0% |
!! | GAAAATAAAGAGAAAAATGT+TGG | + | chr5_3:49720825-49720844 | Msa0815960:intron | 20.0% |
!!! | ATTTTTCTTCTTGTGATTTT+GGG | - | chr5_3:49721040-49721059 | None:intergenic | 20.0% |
!!! | AATTTTTCTTCTTGTGATTT+TGG | - | chr5_3:49721041-49721060 | None:intergenic | 20.0% |
!! | TTCAATATTTCATCTTTGTT+TGG | + | chr5_3:49719188-49719207 | Msa0815960:intron | 20.0% |
!!! | AAGGTTGATATTTCAATAAT+AGG | + | chr5_3:49719214-49719233 | Msa0815960:intron | 20.0% |
!! | ATAGTAATTACATTTAAAGG+AGG | + | chr5_3:49719409-49719428 | Msa0815960:intron | 20.0% |
!!! | AGCAATTTTAGAATTTGTTT+GGG | + | chr5_3:49719440-49719459 | Msa0815960:intron | 20.0% |
!! | AAGCAATAAAATTGTTCTTT+GGG | - | chr5_3:49719516-49719535 | None:intergenic | 20.0% |
!! | AAAGCAATAAAATTGTTCTT+TGG | - | chr5_3:49719517-49719536 | None:intergenic | 20.0% |
!! | TGATTGTCTTATATGAAATT+AGG | + | chr5_3:49719560-49719579 | Msa0815960:intron | 20.0% |
!! | TCTTATATGAAATTAGGAAA+TGG | + | chr5_3:49719566-49719585 | Msa0815960:intron | 20.0% |
!!! | TTTTTTTCACCCTTTTTTTT+TGG | - | chr5_3:49720095-49720114 | None:intergenic | 20.0% |
!!! | GAAAATAATTTTCTTTTGCT+TGG | - | chr5_3:49720202-49720221 | None:intergenic | 20.0% |
!! | TGTTCATTGATAGAAAATAT+TGG | + | chr5_3:49720259-49720278 | Msa0815960:intron | 20.0% |
!! | TAGAAAATATTGGATCAATA+TGG | + | chr5_3:49720269-49720288 | Msa0815960:intron | 20.0% |
!! | TCAAGACTATAAAGAATATA+TGG | - | chr5_3:49720348-49720367 | None:intergenic | 20.0% |
!!! | ATATATTCTTTATAGTCTTG+AGG | + | chr5_3:49720347-49720366 | Msa0815960:intron | 20.0% |
!!! | GTTATGATCAAATTTTGAAA+AGG | + | chr5_3:49720604-49720623 | Msa0815960:intron | 20.0% |
!! | GAAAATAAAGAGAAAAATGT+TGG | + | chr5_3:49720825-49720844 | Msa0815960:intron | 20.0% |
!!! | ATTTTTCTTCTTGTGATTTT+GGG | - | chr5_3:49721040-49721059 | None:intergenic | 20.0% |
!!! | AATTTTTCTTCTTGTGATTT+TGG | - | chr5_3:49721041-49721060 | None:intergenic | 20.0% |
!! | TTCAATATTTCATCTTTGTT+TGG | + | chr5_3:49719188-49719207 | Msa0815960:intron | 20.0% |
!!! | AAGGTTGATATTTCAATAAT+AGG | + | chr5_3:49719214-49719233 | Msa0815960:intron | 20.0% |
!! | ATAGTAATTACATTTAAAGG+AGG | + | chr5_3:49719409-49719428 | Msa0815960:intron | 20.0% |
!!! | GGTTCTTTTGTTTGATATTA+TGG | - | chr5_3:49714115-49714134 | None:intergenic | 25.0% |
!! | ACAAAATTTGCCAAATGTTT+TGG | + | chr5_3:49714287-49714306 | Msa0815960:CDS | 25.0% |
!! | TTTTCAGTTTCATGATGATT+TGG | - | chr5_3:49714500-49714519 | None:intergenic | 25.0% |
! | AAAATGGAGAGAGTTTAAAT+AGG | + | chr5_3:49714582-49714601 | Msa0815960:CDS | 25.0% |
! | ATCACTTGAAATCATCAATA+TGG | + | chr5_3:49715009-49715028 | Msa0815960:CDS | 25.0% |
!! | ATAGAATCTATTAGCTTAAC+AGG | - | chr5_3:49715076-49715095 | None:intergenic | 25.0% |
!! | TCTATATCTTTAGAAGTTGA+AGG | + | chr5_3:49715286-49715305 | Msa0815960:CDS | 25.0% |
!! | CTATATCTTTAGAAGTTGAA+GGG | + | chr5_3:49715287-49715306 | Msa0815960:CDS | 25.0% |
! | TGATCATATTAGATATATGG+TGG | + | chr5_3:49715492-49715511 | Msa0815960:intron | 25.0% |
!!! | CTGAGAAATGAATTTTTCAA+AGG | - | chr5_3:49715650-49715669 | None:intergenic | 25.0% |
! | CTTAATTTATCACACATGTT+TGG | + | chr5_3:49715841-49715860 | Msa0815960:intron | 25.0% |
! | AATAAACTGAAAACAGTCTA+TGG | - | chr5_3:49715939-49715958 | None:intergenic | 25.0% |
!!! | GTTGTTTTCATAAACTATTC+TGG | - | chr5_3:49715974-49715993 | None:intergenic | 25.0% |
! | CATGAATTATTAATACCGTT+TGG | - | chr5_3:49716118-49716137 | None:intergenic | 25.0% |
! | GTACTAGATATAAAAACTCA+CGG | - | chr5_3:49716296-49716315 | None:intergenic | 25.0% |
!!! | ATCATTTACACTGGTTTTAT+CGG | - | chr5_3:49716436-49716455 | None:intergenic | 25.0% |
! | CATTTCATTATCATTTACAC+TGG | - | chr5_3:49716445-49716464 | None:intergenic | 25.0% |
!! | CAGTGTAAATGATAATGAAA+TGG | + | chr5_3:49716443-49716462 | Msa0815960:CDS | 25.0% |
! | AATATCAGCTGAAAAAATTG+AGG | + | chr5_3:49716476-49716495 | Msa0815960:CDS | 25.0% |
! | ATTACAATACCAAAGAATGA+TGG | + | chr5_3:49716863-49716882 | Msa0815960:CDS | 25.0% |
!! | TAGTACTTTAGAAGAATTTG+AGG | + | chr5_3:49717229-49717248 | Msa0815960:CDS | 25.0% |
! | AGAGGAAAAGATAATTTCAT+TGG | + | chr5_3:49717289-49717308 | Msa0815960:CDS | 25.0% |
! | AAGATAATTTCATTGGAAGA+TGG | + | chr5_3:49717296-49717315 | Msa0815960:CDS | 25.0% |
! | ATTTGCATTTGATAGAGAAT+TGG | + | chr5_3:49717484-49717503 | Msa0815960:CDS | 25.0% |
! | TTCATTTAAACAAACCCAAA+TGG | - | chr5_3:49717958-49717977 | None:intergenic | 25.0% |
! | GATTTAACAACTCTATTTAG+AGG | - | chr5_3:49717991-49718010 | None:intergenic | 25.0% |
! | AATTACATGCTTGAAACAAT+TGG | - | chr5_3:49718066-49718085 | None:intergenic | 25.0% |
! | TTGTTTCAAGCATGTAATTA+AGG | + | chr5_3:49718067-49718086 | Msa0815960:intron | 25.0% |
! | TCTATCATTTAATCAAGGAT+AGG | + | chr5_3:49718143-49718162 | Msa0815960:intron | 25.0% |
!! | ATCTTAGCATTACTGATTAA+TGG | + | chr5_3:49718271-49718290 | Msa0815960:intron | 25.0% |
! | GTATGTTCATATCTAATCTA+AGG | + | chr5_3:49718530-49718549 | Msa0815960:intron | 25.0% |
! | TAATATACGAGTATGTAGTT+AGG | - | chr5_3:49718709-49718728 | None:intergenic | 25.0% |
! | AGAATGCAAAGTCATTTATT+TGG | - | chr5_3:49718877-49718896 | None:intergenic | 25.0% |
!! | TTTCATCTTTGTTTGGAATA+AGG | + | chr5_3:49719195-49719214 | Msa0815960:intron | 25.0% |
!!! | CAGCAATTTTAGAATTTGTT+TGG | + | chr5_3:49719439-49719458 | Msa0815960:intron | 25.0% |
! | AGCAATAAAATTGTTCTTTG+GGG | - | chr5_3:49719515-49719534 | None:intergenic | 25.0% |
!! | ATTTGTTACAAGTATCTCAA+TGG | - | chr5_3:49719687-49719706 | None:intergenic | 25.0% |
! | TTATCAATCTTTCTTGGATT+AGG | + | chr5_3:49719874-49719893 | Msa0815960:intron | 25.0% |
! | TCAAAAATGAAGAAATGGAA+TGG | - | chr5_3:49719921-49719940 | None:intergenic | 25.0% |
! | AAGACTCAAAAATGAAGAAA+TGG | - | chr5_3:49719926-49719945 | None:intergenic | 25.0% |
!!! | AACAACTATGAATATTTTGG+TGG | - | chr5_3:49719951-49719970 | None:intergenic | 25.0% |
!! | GGAAACAACTATGAATATTT+TGG | - | chr5_3:49719954-49719973 | None:intergenic | 25.0% |
! | CTATAAAGAATATATGGATC+TGG | - | chr5_3:49720342-49720361 | None:intergenic | 25.0% |
!! | TCATATTCTCCAATTTTGAA+TGG | - | chr5_3:49720426-49720445 | None:intergenic | 25.0% |
!!! | AAAAAATCTCTTGTTTTGGA+AGG | - | chr5_3:49720474-49720493 | None:intergenic | 25.0% |
! | AAATGAAAATGTGTAAGTGT+TGG | - | chr5_3:49720547-49720566 | None:intergenic | 25.0% |
! | AGAGATGTTGAAAAAATAGA+AGG | + | chr5_3:49720738-49720757 | Msa0815960:intron | 25.0% |
! | AAAGGTAAAAGAAGAGAAAA+AGG | + | chr5_3:49720791-49720810 | Msa0815960:intron | 25.0% |
! | AAAAAACTTCTTCATTTGCT+TGG | - | chr5_3:49720971-49720990 | None:intergenic | 25.0% |
!! | TTTCATCTTTGTTTGGAATA+AGG | + | chr5_3:49719195-49719214 | Msa0815960:intron | 25.0% |
!!! | CAGCAATTTTAGAATTTGTT+TGG | + | chr5_3:49719439-49719458 | Msa0815960:intron | 25.0% |
! | AGCAATAAAATTGTTCTTTG+GGG | - | chr5_3:49719515-49719534 | None:intergenic | 25.0% |
!! | ATTTGTTACAAGTATCTCAA+TGG | - | chr5_3:49719687-49719706 | None:intergenic | 25.0% |
! | TTATCAATCTTTCTTGGATT+AGG | + | chr5_3:49719874-49719893 | Msa0815960:intron | 25.0% |
! | TCAAAAATGAAGAAATGGAA+TGG | - | chr5_3:49719921-49719940 | None:intergenic | 25.0% |
! | AAGACTCAAAAATGAAGAAA+TGG | - | chr5_3:49719926-49719945 | None:intergenic | 25.0% |
!!! | AACAACTATGAATATTTTGG+TGG | - | chr5_3:49719951-49719970 | None:intergenic | 25.0% |
!! | GGAAACAACTATGAATATTT+TGG | - | chr5_3:49719954-49719973 | None:intergenic | 25.0% |
! | CTATAAAGAATATATGGATC+TGG | - | chr5_3:49720342-49720361 | None:intergenic | 25.0% |
!! | TCATATTCTCCAATTTTGAA+TGG | - | chr5_3:49720426-49720445 | None:intergenic | 25.0% |
!!! | AAAAAATCTCTTGTTTTGGA+AGG | - | chr5_3:49720474-49720493 | None:intergenic | 25.0% |
! | AAATGAAAATGTGTAAGTGT+TGG | - | chr5_3:49720547-49720566 | None:intergenic | 25.0% |
! | AGAGATGTTGAAAAAATAGA+AGG | + | chr5_3:49720738-49720757 | Msa0815960:intron | 25.0% |
! | AAAGGTAAAAGAAGAGAAAA+AGG | + | chr5_3:49720791-49720810 | Msa0815960:intron | 25.0% |
! | TGATATGTGTAGTTAAATGT+TGG | + | chr5_3:49722975-49722994 | Msa0815960:intron | 25.0% |
! | GATATGTGTAGTTAAATGTT+GGG | + | chr5_3:49722976-49722995 | Msa0815960:intron | 25.0% |
! | AAAAAACTTCTTCATTTGCT+TGG | - | chr5_3:49720971-49720990 | None:intergenic | 25.0% |
!! | TTTCATCTTTGTTTGGAATA+AGG | + | chr5_3:49719195-49719214 | Msa0815960:intron | 25.0% |
!!! | AGCAGTTTTAGAATTTGTTT+GGG | + | chr5_3:49723609-49723628 | Msa0815960:three_prime_UTR | 25.0% |
TAGTGTATGCATTTCTTGAA+TGG | + | chr5_3:49714216-49714235 | Msa0815960:CDS | 30.0% | |
! | TGGTTTAAGACCAAAACATT+TGG | - | chr5_3:49714300-49714319 | None:intergenic | 30.0% |
CATGAAACTGAAAACTCATT+TGG | + | chr5_3:49714506-49714525 | Msa0815960:CDS | 30.0% | |
!!! | ATAGGATTGGTTTTATTCCA+TGG | + | chr5_3:49714537-49714556 | Msa0815960:CDS | 30.0% |
CATGAGAAACATGATGAAAA+TGG | + | chr5_3:49714566-49714585 | Msa0815960:CDS | 30.0% | |
GATGGAAACTATTTAAGCAA+AGG | + | chr5_3:49714674-49714693 | Msa0815960:CDS | 30.0% | |
TCAATAGAAGATGACAAAGA+AGG | + | chr5_3:49714713-49714732 | Msa0815960:CDS | 30.0% | |
!!! | TGAAAGTTTTATTCTCAGAG+AGG | + | chr5_3:49714832-49714851 | Msa0815960:CDS | 30.0% |
AAACTTGAACTCTGATGAAA+AGG | + | chr5_3:49714883-49714902 | Msa0815960:CDS | 30.0% | |
ATAAAATCATCAACAGCACT+TGG | - | chr5_3:49714938-49714957 | None:intergenic | 30.0% | |
TGAATCATGCAAATTGAATG+AGG | + | chr5_3:49715111-49715130 | Msa0815960:CDS | 30.0% | |
!! | AGAGGAAGTATTGATCAAAA+TGG | + | chr5_3:49715210-49715229 | Msa0815960:CDS | 30.0% |
GTAGTTCAAATTTCTGTGAA+TGG | + | chr5_3:49715325-49715344 | Msa0815960:CDS | 30.0% | |
! | TGCTTGATGTATAGAGTTTT+TGG | + | chr5_3:49715407-49715426 | Msa0815960:intron | 30.0% |
AACAGAAACATGTTATGCAA+AGG | - | chr5_3:49715469-49715488 | None:intergenic | 30.0% | |
TTCCAAATTTCTGTCATTGT+CGG | - | chr5_3:49715701-49715720 | None:intergenic | 30.0% | |
TTTATCACACATGTTTGGAT+CGG | + | chr5_3:49715846-49715865 | Msa0815960:intron | 30.0% | |
AATTCAGATGTTCATCCAAA+CGG | + | chr5_3:49716100-49716119 | Msa0815960:intron | 30.0% | |
! | TTCAGCTGATATTGTTTTCT+CGG | - | chr5_3:49716469-49716488 | None:intergenic | 30.0% |
AATAGCTACTAACCAAACAA+TGG | + | chr5_3:49716791-49716810 | Msa0815960:CDS | 30.0% | |
TTGTAATCATTGCCATTGTT+TGG | - | chr5_3:49716806-49716825 | None:intergenic | 30.0% | |
AAACAATGGCAATGATTACA+AGG | + | chr5_3:49716805-49716824 | Msa0815960:CDS | 30.0% | |
AGAGTATAGGGAAAAAGTTA+TGG | + | chr5_3:49716983-49717002 | Msa0815960:CDS | 30.0% | |
ATGTTGAGAAGAATGAAAGA+TGG | + | chr5_3:49717032-49717051 | Msa0815960:CDS | 30.0% | |
CACAAAGAAGACTATTCTAA+TGG | + | chr5_3:49717359-49717378 | Msa0815960:CDS | 30.0% | |
TTCTCTGCTTCATCTAAATA+TGG | - | chr5_3:49717446-49717465 | None:intergenic | 30.0% | |
AGTTCCTATGATAAGTGAAA+TGG | + | chr5_3:49717541-49717560 | Msa0815960:CDS | 30.0% | |
CTATCCATTTCACTTATCAT+AGG | - | chr5_3:49717548-49717567 | None:intergenic | 30.0% | |
AGAATTTCTCCAACATTGTA+TGG | + | chr5_3:49717637-49717656 | Msa0815960:CDS | 30.0% | |
GAATTTCTCCAACATTGTAT+GGG | + | chr5_3:49717638-49717657 | Msa0815960:CDS | 30.0% | |
TGAATGCAACTTAACTATAG+TGG | - | chr5_3:49717777-49717796 | None:intergenic | 30.0% | |
TGTCATTCATGCATACTTTA+GGG | - | chr5_3:49717897-49717916 | None:intergenic | 30.0% | |
ATTTAAACAAACCCAAATGG+AGG | - | chr5_3:49717955-49717974 | None:intergenic | 30.0% | |
CCTAGTACAACTTAATGTAT+GGG | + | chr5_3:49718092-49718111 | Msa0815960:intron | 30.0% | |
AATGATAGAGCTGTCAATTT+AGG | - | chr5_3:49718132-49718151 | None:intergenic | 30.0% | |
ACAGCTCTATCATTTAATCA+AGG | + | chr5_3:49718138-49718157 | Msa0815960:intron | 30.0% | |
AGCAAACTGCATATAATGAA+AGG | - | chr5_3:49718312-49718331 | None:intergenic | 30.0% | |
! | TTATATGCAGTTTGCTTTGT+TGG | + | chr5_3:49718316-49718335 | Msa0815960:intron | 30.0% |
ATGAAAATACACATGCATGT+AGG | + | chr5_3:49718350-49718369 | Msa0815960:intron | 30.0% | |
TGAGAAAAATACTTCTCCAA+TGG | + | chr5_3:49718438-49718457 | Msa0815960:intron | 30.0% | |
AAAAATACTTCTCCAATGGA+GGG | + | chr5_3:49718442-49718461 | Msa0815960:intron | 30.0% | |
!! | CATGTCATGGTTTGTTAAAT+TGG | + | chr5_3:49718483-49718502 | Msa0815960:intron | 30.0% |
CTATCTACAAAAATTGTGTG+AGG | + | chr5_3:49718565-49718584 | Msa0815960:intron | 30.0% | |
AGAACATCATTTGGTCTAAT+TGG | + | chr5_3:49718613-49718632 | Msa0815960:intron | 30.0% | |
GAACATCATTTGGTCTAATT+GGG | + | chr5_3:49718614-49718633 | Msa0815960:intron | 30.0% | |
GTTCAATGTTACAAAATGCT+CGG | + | chr5_3:49719002-49719021 | Msa0815960:intron | 30.0% | |
TCATTAGTTCATTAAGCATG+TGG | + | chr5_3:49719054-49719073 | Msa0815960:intron | 30.0% | |
!! | TCATGCATAAAAAGTATCCA+TGG | - | chr5_3:49719124-49719143 | None:intergenic | 30.0% |
ATATGAAATTAGGAAATGGC+TGG | + | chr5_3:49719570-49719589 | Msa0815960:intron | 30.0% | |
! | ATATTCATAGTTGTTTCCGA+CGG | + | chr5_3:49719956-49719975 | Msa0815960:intron | 30.0% |
AATTGGAGAATATGAAGATG+AGG | + | chr5_3:49720431-49720450 | Msa0815960:intron | 30.0% | |
!!! | ATTTTTTATTTGGGCTTCCA+TGG | + | chr5_3:49720487-49720506 | Msa0815960:intron | 30.0% |
ATTCTTGCACATGATAAGTT+TGG | + | chr5_3:49720582-49720601 | Msa0815960:intron | 30.0% | |
TGAAAAAATAGAAGGTCTCA+TGG | + | chr5_3:49720746-49720765 | Msa0815960:intron | 30.0% | |
CATGGTAAAAGAAAGTAATG+AGG | + | chr5_3:49720764-49720783 | Msa0815960:intron | 30.0% | |
AGAAAGTAATGAGGATGAAA+AGG | + | chr5_3:49720773-49720792 | Msa0815960:intron | 30.0% | |
AGAGAAAAAGGTTAATGAGA+AGG | + | chr5_3:49720803-49720822 | Msa0815960:intron | 30.0% | |
! | AGAAAAATGTTGGGAAGTTT+TGG | + | chr5_3:49720835-49720854 | Msa0815960:intron | 30.0% |
TGGTATGTGTAGTTAAATGT+TGG | + | chr5_3:49720889-49720908 | Msa0815960:intron | 30.0% | |
GGTATGTGTAGTTAAATGTT+GGG | + | chr5_3:49720890-49720909 | Msa0815960:intron | 30.0% | |
TGAGTTAAAGAAGTAAGGTT+AGG | - | chr5_3:49720939-49720958 | None:intergenic | 30.0% | |
CTTCATGAGTTAAAGAAGTA+AGG | - | chr5_3:49720944-49720963 | None:intergenic | 30.0% | |
CTTACTTCTTTAACTCATGA+AGG | + | chr5_3:49720942-49720961 | Msa0815960:intron | 30.0% | |
TAGAAAACGATCATGTTCTT+TGG | + | chr5_3:49721000-49721019 | Msa0815960:intron | 30.0% | |
! | AACTCACTTCAATTTTATGC+AGG | + | chr5_3:49721068-49721087 | Msa0815960:intron | 30.0% |
! | ACTTCAATTTTATGCAGGTT+TGG | + | chr5_3:49721073-49721092 | Msa0815960:intron | 30.0% |
TCATTAGTTCATTAAGCATG+TGG | + | chr5_3:49719054-49719073 | Msa0815960:intron | 30.0% | |
!! | TCATGCATAAAAAGTATCCA+TGG | - | chr5_3:49719124-49719143 | None:intergenic | 30.0% |
ATATGAAATTAGGAAATGGC+TGG | + | chr5_3:49719570-49719589 | Msa0815960:intron | 30.0% | |
! | ATATTCATAGTTGTTTCCGA+CGG | + | chr5_3:49719956-49719975 | Msa0815960:intron | 30.0% |
AATTGGAGAATATGAAGATG+AGG | + | chr5_3:49720431-49720450 | Msa0815960:intron | 30.0% | |
!!! | ATTTTTTATTTGGGCTTCCA+TGG | + | chr5_3:49720487-49720506 | Msa0815960:intron | 30.0% |
ATTCTTGCACATGATAAGTT+TGG | + | chr5_3:49720582-49720601 | Msa0815960:intron | 30.0% | |
TGAAAAAATAGAAGGTCTCA+TGG | + | chr5_3:49720746-49720765 | Msa0815960:intron | 30.0% | |
CATGGTAAAAGAAAGTAATG+AGG | + | chr5_3:49720764-49720783 | Msa0815960:intron | 30.0% | |
AGAAAGTAATGAGGATGAAA+AGG | + | chr5_3:49720773-49720792 | Msa0815960:intron | 30.0% | |
AGAGAAAAAGGTTAATGAGA+AGG | + | chr5_3:49720803-49720822 | Msa0815960:intron | 30.0% | |
! | AGAAAAATGTTGGGAAGTTT+TGG | + | chr5_3:49720835-49720854 | Msa0815960:intron | 30.0% |
TGAGTTAAAGAAGTAAGGTT+AGG | - | chr5_3:49720939-49720958 | None:intergenic | 30.0% | |
CTTCATGAGTTAAAGAAGTA+AGG | - | chr5_3:49720944-49720963 | None:intergenic | 30.0% | |
CTTACTTCTTTAACTCATGA+AGG | + | chr5_3:49720942-49720961 | Msa0815960:intron | 30.0% | |
TAGAAAACGATCATGTTCTT+TGG | + | chr5_3:49721000-49721019 | Msa0815960:intron | 30.0% | |
! | AACTCACTTCAATTTTATGC+AGG | + | chr5_3:49721068-49721087 | Msa0815960:intron | 30.0% |
TTTATGCAGGTTTGAATTTG+AGG | + | chr5_3:49723167-49723186 | Msa0815960:intron | 30.0% | |
TCATTAGTTCATTAAGCATG+TGG | + | chr5_3:49719054-49719073 | Msa0815960:intron | 30.0% | |
!! | TCATGCATAAAAAGTATCCA+TGG | - | chr5_3:49719124-49719143 | None:intergenic | 30.0% |
! | TAAAACCGTTACTTTACCAT+GGG | - | chr5_3:49723537-49723556 | None:intergenic | 30.0% |
!!! | CAGCAGTTTTAGAATTTGTT+TGG | + | chr5_3:49723608-49723627 | Msa0815960:three_prime_UTR | 30.0% |
ACAAAAGAACCAGCATAGTT+TGG | + | chr5_3:49714124-49714143 | Msa0815960:five_prime_UTR | 35.0% | |
!!! | TTGCTTTTTCCAAACTATGC+TGG | - | chr5_3:49714136-49714155 | None:intergenic | 35.0% |
GCATAGTTTGGAAAAAGCAA+TGG | + | chr5_3:49714136-49714155 | Msa0815960:exon | 35.0% | |
! | GTTGGTGTTTCTATGTAACA+TGG | - | chr5_3:49714180-49714199 | None:intergenic | 35.0% |
TAGCATGTGTGAAAATTGCT+TGG | + | chr5_3:49714466-49714485 | Msa0815960:CDS | 35.0% | |
ACTCATTTGGTATGAGACAT+AGG | + | chr5_3:49714519-49714538 | Msa0815960:CDS | 35.0% | |
TTTGGTATGAGACATAGGAT+TGG | + | chr5_3:49714524-49714543 | Msa0815960:CDS | 35.0% | |
TGTTTCTCATGACTTAACCA+TGG | - | chr5_3:49714557-49714576 | None:intergenic | 35.0% | |
ACAGATAAGGAGGGTAAATT+TGG | - | chr5_3:49714637-49714656 | None:intergenic | 35.0% | |
TAGTTTCCATCATACCAAGA+AGG | - | chr5_3:49714665-49714684 | None:intergenic | 35.0% | |
AGAAGAACATGATCATGATC+AGG | + | chr5_3:49714769-49714788 | Msa0815960:CDS | 35.0% | |
!!! | AAGTTTTATTCTCAGAGAGG+TGG | + | chr5_3:49714835-49714854 | Msa0815960:CDS | 35.0% |
CAATGTGAAACCTGCATAAT+AGG | - | chr5_3:49714980-49714999 | None:intergenic | 35.0% | |
TATTAACCGTTCAACGTCAA+TGG | - | chr5_3:49715053-49715072 | None:intergenic | 35.0% | |
CAAATTGAATGAGGATCTAG+AGG | + | chr5_3:49715120-49715139 | Msa0815960:CDS | 35.0% | |
TGCAGAGAAAACAAACATGA+TGG | + | chr5_3:49715240-49715259 | Msa0815960:CDS | 35.0% | |
TGTTTACCTTGTGCATTATC+TGG | - | chr5_3:49715382-49715401 | None:intergenic | 35.0% | |
TTATGCAAAGGAAAGATCGA+TGG | - | chr5_3:49715457-49715476 | None:intergenic | 35.0% | |
ATCCGACAATGACAGAAATT+TGG | + | chr5_3:49715696-49715715 | Msa0815960:CDS | 35.0% | |
CAGAAATTTGGAAGCAGATA+TGG | + | chr5_3:49715708-49715727 | Msa0815960:CDS | 35.0% | |
AGAATTGAGTGCTTCACAAT+TGG | - | chr5_3:49716346-49716365 | None:intergenic | 35.0% | |
ATCAGCTGAAAAAATTGAGG+AGG | + | chr5_3:49716479-49716498 | Msa0815960:CDS | 35.0% | |
CCATCAATCATCAAAATGCT+CGG | + | chr5_3:49716509-49716528 | Msa0815960:CDS | 35.0% | |
ATAAACTTCCTGAAACTCCT+AGG | + | chr5_3:49716553-49716572 | Msa0815960:CDS | 35.0% | |
! | CTCTTTGAGAAAACAGAATC+AGG | + | chr5_3:49716615-49716634 | Msa0815960:CDS | 35.0% |
CTTGTTCTTCCATCATTCTT+TGG | - | chr5_3:49716875-49716894 | None:intergenic | 35.0% | |
! | AGAAGGAATTGGAAGAGTAT+AGG | + | chr5_3:49716970-49716989 | Msa0815960:CDS | 35.0% |
! | GAAGGAATTGGAAGAGTATA+GGG | + | chr5_3:49716971-49716990 | Msa0815960:CDS | 35.0% |
AAGATCAACTGACAGTTCAT+CGG | - | chr5_3:49717108-49717127 | None:intergenic | 35.0% | |
GTTAGAAACGGTATCATCAT+TGG | - | chr5_3:49717162-49717181 | None:intergenic | 35.0% | |
TGATGATACCGTTTCTAACT+TGG | + | chr5_3:49717163-49717182 | Msa0815960:CDS | 35.0% | |
TATCTCCTCCAAGTTAGAAA+CGG | - | chr5_3:49717174-49717193 | None:intergenic | 35.0% | |
! | AGATCAACTCAAAGCATTAG+AGG | + | chr5_3:49717271-49717290 | Msa0815960:CDS | 35.0% |
GATGAGAGTTCATCAAGATA+TGG | + | chr5_3:49717332-49717351 | Msa0815960:CDS | 35.0% | |
CAATCTCCAAGAAGAACAAT+TGG | + | chr5_3:49717398-49717417 | Msa0815960:CDS | 35.0% | |
AAGCAACCAATTGTTCTTCT+TGG | - | chr5_3:49717407-49717426 | None:intergenic | 35.0% | |
AAGAAGAACAATTGGTTGCT+TGG | + | chr5_3:49717406-49717425 | Msa0815960:CDS | 35.0% | |
! | GAAAGTGTGTATTGAAGAAG+AGG | + | chr5_3:49717571-49717590 | Msa0815960:CDS | 35.0% |
TGTATGGGATCCATACAAAA+TGG | + | chr5_3:49717653-49717672 | Msa0815960:CDS | 35.0% | |
! | TTCATCACCACCATTTTGTA+TGG | - | chr5_3:49717666-49717685 | None:intergenic | 35.0% |
! | ATACAAAATGGTGGTGATGA+AGG | + | chr5_3:49717665-49717684 | Msa0815960:CDS | 35.0% |
TGAATTACGCCTTAAGAACT+TGG | + | chr5_3:49717739-49717758 | Msa0815960:CDS | 35.0% | |
GATCATTGTCCAAGTTCTTA+AGG | - | chr5_3:49717751-49717770 | None:intergenic | 35.0% | |
! | TGCAACTTAACTATAGTGGA+TGG | - | chr5_3:49717773-49717792 | None:intergenic | 35.0% |
GTCATTCATGCATACTTTAG+GGG | - | chr5_3:49717896-49717915 | None:intergenic | 35.0% | |
! | GTGTCATTCATGCATACTTT+AGG | - | chr5_3:49717898-49717917 | None:intergenic | 35.0% |
ATTTATCACTCTCCTCCATT+TGG | + | chr5_3:49717940-49717959 | Msa0815960:intron | 35.0% | |
TTTATCACTCTCCTCCATTT+GGG | + | chr5_3:49717941-49717960 | Msa0815960:intron | 35.0% | |
AGTTGTTAAATCAGTCTGCT+CGG | + | chr5_3:49717999-49718018 | Msa0815960:intron | 35.0% | |
GCCTAGTACAACTTAATGTA+TGG | + | chr5_3:49718091-49718110 | Msa0815960:intron | 35.0% | |
! | CCCATACATTAAGTTGTACT+AGG | - | chr5_3:49718095-49718114 | None:intergenic | 35.0% |
ACTTAATGTATGGGTCCTTA+TGG | + | chr5_3:49718101-49718120 | Msa0815960:intron | 35.0% | |
! | TCAATTTAGGATCGACCATA+AGG | - | chr5_3:49718119-49718138 | None:intergenic | 35.0% |
GAAAAATACTTCTCCAATGG+AGG | + | chr5_3:49718441-49718460 | Msa0815960:intron | 35.0% | |
! | TCTAATCTAAGGTGTGAGTT+TGG | + | chr5_3:49718541-49718560 | Msa0815960:intron | 35.0% |
! | CTAATCTAAGGTGTGAGTTT+GGG | + | chr5_3:49718542-49718561 | Msa0815960:intron | 35.0% |
ACATGAGAGAGAACATCATT+TGG | + | chr5_3:49718604-49718623 | Msa0815960:intron | 35.0% | |
AAAGCAAAGTTTCCCATCAT+GGG | - | chr5_3:49718785-49718804 | None:intergenic | 35.0% | |
AAAAGCAAAGTTTCCCATCA+TGG | - | chr5_3:49718786-49718805 | None:intergenic | 35.0% | |
TTGTTTCAACAGTGTGCAAT+TGG | - | chr5_3:49718938-49718957 | None:intergenic | 35.0% | |
TAGTTCATTAAGCATGTGGA+AGG | + | chr5_3:49719058-49719077 | Msa0815960:intron | 35.0% | |
!! | CTTACGTTCCTTGATAGTTT+TGG | + | chr5_3:49719246-49719265 | Msa0815960:intron | 35.0% |
!!! | TTCCTTGATAGTTTTGGAGT+GGG | + | chr5_3:49719252-49719271 | Msa0815960:intron | 35.0% |
TTCAAACTCTTAGCACTCAA+AGG | + | chr5_3:49719325-49719344 | Msa0815960:intron | 35.0% | |
! | TAAAACCGTTGCTTTACCAT+GGG | - | chr5_3:49719368-49719387 | None:intergenic | 35.0% |
!!! | ACGGTTTTAGAATTGAAGAG+AGG | + | chr5_3:49719379-49719398 | Msa0815960:intron | 35.0% |
!!! | TTGGGCTAGCTTTTATCAAT+TGG | + | chr5_3:49719458-49719477 | Msa0815960:intron | 35.0% |
!!! | AGGAAATGGCTGGTTTTATT+AGG | + | chr5_3:49719580-49719599 | Msa0815960:intron | 35.0% |
! | TGTGAAGCTTTGCTTCTTTT+TGG | + | chr5_3:49719780-49719799 | Msa0815960:intron | 35.0% |
ACCATGACTTGATCTTATCA+AGG | + | chr5_3:49719814-49719833 | Msa0815960:intron | 35.0% | |
TCCTTGATAAGATCAAGTCA+TGG | - | chr5_3:49719818-49719837 | None:intergenic | 35.0% | |
!! | TCAAGGAATCACTTTTCTTG+TGG | + | chr5_3:49719831-49719850 | Msa0815960:intron | 35.0% |
TCCAAGAAAGATTGATAAGC+CGG | - | chr5_3:49719872-49719891 | None:intergenic | 35.0% | |
! | TCATTTGGTAATCAGAGCTT+AGG | + | chr5_3:49719993-49720012 | Msa0815960:intron | 35.0% |
GGATCCAGAATTTAAAGACA+TGG | + | chr5_3:49720368-49720387 | Msa0815960:intron | 35.0% | |
TCAGCCATGTCTTTAAATTC+TGG | - | chr5_3:49720375-49720394 | None:intergenic | 35.0% | |
! | TAAAGACATGGCTGATGTTT+TGG | + | chr5_3:49720380-49720399 | Msa0815960:intron | 35.0% |
! | AGATGAGGTATTATGTGATG+TGG | + | chr5_3:49720446-49720465 | Msa0815960:intron | 35.0% |
!! | GAAGGTACTAGTGTAATAGT+AGG | - | chr5_3:49720861-49720880 | None:intergenic | 35.0% |
TTTATGCAGGTTTGGATTTG+AGG | + | chr5_3:49721081-49721100 | Msa0815960:intron | 35.0% | |
TAGTTCATTAAGCATGTGGA+AGG | + | chr5_3:49719058-49719077 | Msa0815960:intron | 35.0% | |
!! | CTTACGTTCCTTGATAGTTT+TGG | + | chr5_3:49719246-49719265 | Msa0815960:intron | 35.0% |
!!! | TTCCTTGATAGTTTTGGAGT+GGG | + | chr5_3:49719252-49719271 | Msa0815960:intron | 35.0% |
TTCAAACTCTTAGCACTCAA+AGG | + | chr5_3:49719325-49719344 | Msa0815960:intron | 35.0% | |
! | TAAAACCGTTGCTTTACCAT+GGG | - | chr5_3:49719368-49719387 | None:intergenic | 35.0% |
!!! | ACGGTTTTAGAATTGAAGAG+AGG | + | chr5_3:49719379-49719398 | Msa0815960:intron | 35.0% |
!!! | TTGGGCTAGCTTTTATCAAT+TGG | + | chr5_3:49719458-49719477 | Msa0815960:intron | 35.0% |
!!! | AGGAAATGGCTGGTTTTATT+AGG | + | chr5_3:49719580-49719599 | Msa0815960:intron | 35.0% |
! | TGTGAAGCTTTGCTTCTTTT+TGG | + | chr5_3:49719780-49719799 | Msa0815960:intron | 35.0% |
ACCATGACTTGATCTTATCA+AGG | + | chr5_3:49719814-49719833 | Msa0815960:intron | 35.0% | |
TCCTTGATAAGATCAAGTCA+TGG | - | chr5_3:49719818-49719837 | None:intergenic | 35.0% | |
!! | TCAAGGAATCACTTTTCTTG+TGG | + | chr5_3:49719831-49719850 | Msa0815960:intron | 35.0% |
TCCAAGAAAGATTGATAAGC+CGG | - | chr5_3:49719872-49719891 | None:intergenic | 35.0% | |
! | TCATTTGGTAATCAGAGCTT+AGG | + | chr5_3:49719993-49720012 | Msa0815960:intron | 35.0% |
GGATCCAGAATTTAAAGACA+TGG | + | chr5_3:49720368-49720387 | Msa0815960:intron | 35.0% | |
TCAGCCATGTCTTTAAATTC+TGG | - | chr5_3:49720375-49720394 | None:intergenic | 35.0% | |
! | TAAAGACATGGCTGATGTTT+TGG | + | chr5_3:49720380-49720399 | Msa0815960:intron | 35.0% |
! | AGATGAGGTATTATGTGATG+TGG | + | chr5_3:49720446-49720465 | Msa0815960:intron | 35.0% |
!! | GAAGGTACTAGTGTAATAGT+AGG | - | chr5_3:49720861-49720880 | None:intergenic | 35.0% |
! | ACACATATCAGCTTTGATGA+AGG | - | chr5_3:49722965-49722984 | None:intergenic | 35.0% |
TAGTTCATTAAGCATGTGGA+AGG | + | chr5_3:49719058-49719077 | Msa0815960:intron | 35.0% | |
!! | CTTACGTTCCTTGATAGTTT+TGG | + | chr5_3:49719246-49719265 | Msa0815960:intron | 35.0% |
!!! | TTCCTTGATAGTTTTGGAGT+GGG | + | chr5_3:49719252-49719271 | Msa0815960:intron | 35.0% |
TTCAAACTCTTAGCACTCAA+AGG | + | chr5_3:49719325-49719344 | Msa0815960:intron | 35.0% | |
TGTATCCCATGGTAAAGTAA+CGG | + | chr5_3:49723529-49723548 | Msa0815960:three_prime_UTR | 35.0% | |
! | CTAAAACCGTTACTTTACCA+TGG | - | chr5_3:49723538-49723557 | None:intergenic | 35.0% |
!!! | ACGGTTTTAGAATTGAAGAG+AGG | + | chr5_3:49719379-49719398 | Msa0815960:intron | 35.0% |
!!! | TTGGGCTAGCTTTTATCAAT+TGG | + | chr5_3:49719458-49719477 | Msa0815960:intron | 35.0% |
CTTGAACAGAAAAGACAAGG+TGG | - | chr5_3:49714320-49714339 | None:intergenic | 40.0% | |
! | CACCTTGTCTTTTCTGTTCA+AGG | + | chr5_3:49714318-49714337 | Msa0815960:CDS | 40.0% |
AGCCTTGAACAGAAAAGACA+AGG | - | chr5_3:49714323-49714342 | None:intergenic | 40.0% | |
GTGAAAATTGCTTGGCTTCT+AGG | + | chr5_3:49714474-49714493 | Msa0815960:CDS | 40.0% | |
AAGGCTTCAACAGATAAGGA+GGG | - | chr5_3:49714646-49714665 | None:intergenic | 40.0% | |
CAAGAAGGCTTCAACAGATA+AGG | - | chr5_3:49714650-49714669 | None:intergenic | 40.0% | |
CTTATCTGTTGAAGCCTTCT+TGG | + | chr5_3:49714648-49714667 | Msa0815960:CDS | 40.0% | |
TTGAAGCCTTCTTGGTATGA+TGG | + | chr5_3:49714656-49714675 | Msa0815960:CDS | 40.0% | |
TGATCATGATCAGGATGAAG+AGG | + | chr5_3:49714778-49714797 | Msa0815960:CDS | 40.0% | |
GGATGCAGAAAAAGATGAGA+AGG | + | chr5_3:49714904-49714923 | Msa0815960:CDS | 40.0% | |
TTCTGATGCTCCTATTATGC+AGG | + | chr5_3:49714967-49714986 | Msa0815960:CDS | 40.0% | |
ACAAAGCCATTGACGTTGAA+CGG | + | chr5_3:49715044-49715063 | Msa0815960:CDS | 40.0% | |
ATTGAATGAGGATCTAGAGG+AGG | + | chr5_3:49715123-49715142 | Msa0815960:CDS | 40.0% | |
!! | TCTTCTAAGACGCTTGATTG+CGG | - | chr5_3:49715193-49715212 | None:intergenic | 40.0% |
GATGGAGCTTGAAGAAAGTT+TGG | + | chr5_3:49715258-49715277 | Msa0815960:CDS | 40.0% | |
!! | TGCATTATCTGGTTCTTCTG+TGG | - | chr5_3:49715371-49715390 | None:intergenic | 40.0% |
GAAGAACCAGATAATGCACA+AGG | + | chr5_3:49715373-49715392 | Msa0815960:CDS | 40.0% | |
TGCACACAAGAAGATGAATC+TGG | + | chr5_3:49715589-49715608 | Msa0815960:CDS | 40.0% | |
! | TGGATCAAGTGATGATGATG+AGG | + | chr5_3:49715609-49715628 | Msa0815960:CDS | 40.0% |
!! | ATGCATTGACTTGAGTAGGT+TGG | - | chr5_3:49716186-49716205 | None:intergenic | 40.0% |
!! | TGACATGCATTGACTTGAGT+AGG | - | chr5_3:49716190-49716209 | None:intergenic | 40.0% |
ATCTTCTTCAAGTGACAGTG+AGG | + | chr5_3:49716218-49716237 | Msa0815960:CDS | 40.0% | |
GAGTGCTTCACAATTGGATA+TGG | - | chr5_3:49716340-49716359 | None:intergenic | 40.0% | |
!! | CCGAGCATTTTGATGATTGA+TGG | - | chr5_3:49716512-49716531 | None:intergenic | 40.0% |
!! | ATCCGGTTTTAACAATCGAC+CGG | + | chr5_3:49716688-49716707 | Msa0815960:CDS | 40.0% |
!! | CTTTTAGGGATGCTTTTAGC+CGG | - | chr5_3:49716710-49716729 | None:intergenic | 40.0% |
! | AGCTCTTTGTTCGGCTTTTA+GGG | - | chr5_3:49716724-49716743 | None:intergenic | 40.0% |
TTGGTTAGTAGCTATTGCTG+AGG | - | chr5_3:49716787-49716806 | None:intergenic | 40.0% | |
AGAGAAGCAAGAACTTGAGA+AGG | + | chr5_3:49716953-49716972 | Msa0815960:CDS | 40.0% | |
GCAAGAACTTGAGAAGGAAT+TGG | + | chr5_3:49716959-49716978 | Msa0815960:CDS | 40.0% | |
TCTTGTTCTTGTTGCAACAC+CGG | + | chr5_3:49717077-49717096 | Msa0815960:CDS | 40.0% | |
TGATACCGTTTCTAACTTGG+AGG | + | chr5_3:49717166-49717185 | Msa0815960:CDS | 40.0% | |
GTATGGATCCCATACAATGT+TGG | - | chr5_3:49717649-49717668 | None:intergenic | 40.0% | |
ATGGGATCCATACAAAATGG+TGG | + | chr5_3:49717656-49717675 | Msa0815960:CDS | 40.0% | |
! | AAATGGTGGTGATGAAGGAA+AGG | + | chr5_3:49717670-49717689 | Msa0815960:CDS | 40.0% |
TTCACCAAGCAAAGACTTGT+AGG | + | chr5_3:49717793-49717812 | Msa0815960:CDS | 40.0% | |
TATGCCTACAAGTCTTTGCT+TGG | - | chr5_3:49717800-49717819 | None:intergenic | 40.0% | |
AGCAAAGACTTGTAGGCATA+AGG | + | chr5_3:49717800-49717819 | Msa0815960:exon | 40.0% | |
!! | GGATTTATGGTGTCATGTCA+TGG | + | chr5_3:49718470-49718489 | Msa0815960:intron | 40.0% |
! | AGCAAAGTTGTTTCCCATGA+TGG | + | chr5_3:49718769-49718788 | Msa0815960:intron | 40.0% |
! | GCAAAGTTGTTTCCCATGAT+GGG | + | chr5_3:49718770-49718789 | Msa0815960:intron | 40.0% |
CAACAGTGTGCAATTGGATT+AGG | - | chr5_3:49718932-49718951 | None:intergenic | 40.0% | |
ATTATGTGTTGCACACTCCA+TGG | + | chr5_3:49719104-49719123 | Msa0815960:intron | 40.0% | |
CGTGTCATCTTGCTTCAAAT+TGG | + | chr5_3:49719150-49719169 | Msa0815960:intron | 40.0% | |
ATCAAGGAACGTAAGTTGCA+TGG | - | chr5_3:49719241-49719260 | None:intergenic | 40.0% | |
!!! | GTTCCTTGATAGTTTTGGAG+TGG | + | chr5_3:49719251-49719270 | Msa0815960:intron | 40.0% |
AGATTCACTAGCTCATCAAG+TGG | + | chr5_3:49719279-49719298 | Msa0815960:intron | 40.0% | |
TGTATCCCATGGTAAAGCAA+CGG | + | chr5_3:49719360-49719379 | Msa0815960:intron | 40.0% | |
! | CTAAAACCGTTGCTTTACCA+TGG | - | chr5_3:49719369-49719388 | None:intergenic | 40.0% |
!!! | GCTTTGCTTCTTTTTGGTTC+TGG | + | chr5_3:49719786-49719805 | Msa0815960:intron | 40.0% |
AAGAAAGATTGATAAGCCGG+TGG | - | chr5_3:49719869-49719888 | None:intergenic | 40.0% | |
! | ACCGGCTTATCAATCTTTCT+TGG | + | chr5_3:49719868-49719887 | Msa0815960:intron | 40.0% |
! | TTCTTGGATTAGGAAGAGTG+TGG | + | chr5_3:49719884-49719903 | Msa0815960:intron | 40.0% |
AAGAAATGGAATGGAGACAG+GGG | - | chr5_3:49719912-49719931 | None:intergenic | 40.0% | |
GAAGAAATGGAATGGAGACA+GGG | - | chr5_3:49719913-49719932 | None:intergenic | 40.0% | |
TGAAGAAATGGAATGGAGAC+AGG | - | chr5_3:49719914-49719933 | None:intergenic | 40.0% | |
TCAGAGCTTAGGTTCAAATC+AGG | + | chr5_3:49720004-49720023 | Msa0815960:intron | 40.0% | |
CAATATGGCAAGCACATCAA+TGG | + | chr5_3:49720284-49720303 | Msa0815960:intron | 40.0% | |
!! | GTGAGAGTGCCATTCAAAAT+TGG | + | chr5_3:49720414-49720433 | Msa0815960:intron | 40.0% |
! | GAAGAGAAGAAAGCATGGAA+AGG | + | chr5_3:49720634-49720653 | Msa0815960:intron | 40.0% |
ACTAGTACCTTCATCAAAGC+TGG | + | chr5_3:49720869-49720888 | Msa0815960:intron | 40.0% | |
! | ACACATACCAGCTTTGATGA+AGG | - | chr5_3:49720879-49720898 | None:intergenic | 40.0% |
GTCAAATCCTGTTGAAGAGA+GGG | + | chr5_3:49721103-49721122 | Msa0815960:intron | 40.0% | |
TCAAATCCTGTTGAAGAGAG+GGG | + | chr5_3:49721104-49721123 | Msa0815960:intron | 40.0% | |
ATTATGTGTTGCACACTCCA+TGG | + | chr5_3:49719104-49719123 | Msa0815960:intron | 40.0% | |
ATCAAGGAACGTAAGTTGCA+TGG | - | chr5_3:49719241-49719260 | None:intergenic | 40.0% | |
!!! | GTTCCTTGATAGTTTTGGAG+TGG | + | chr5_3:49719251-49719270 | Msa0815960:intron | 40.0% |
AGATTCACTAGCTCATCAAG+TGG | + | chr5_3:49719279-49719298 | Msa0815960:intron | 40.0% | |
TGTATCCCATGGTAAAGCAA+CGG | + | chr5_3:49719360-49719379 | Msa0815960:intron | 40.0% | |
! | CTAAAACCGTTGCTTTACCA+TGG | - | chr5_3:49719369-49719388 | None:intergenic | 40.0% |
!!! | GCTTTGCTTCTTTTTGGTTC+TGG | + | chr5_3:49719786-49719805 | Msa0815960:intron | 40.0% |
AAGAAAGATTGATAAGCCGG+TGG | - | chr5_3:49719869-49719888 | None:intergenic | 40.0% | |
! | ACCGGCTTATCAATCTTTCT+TGG | + | chr5_3:49719868-49719887 | Msa0815960:intron | 40.0% |
! | TTCTTGGATTAGGAAGAGTG+TGG | + | chr5_3:49719884-49719903 | Msa0815960:intron | 40.0% |
AAGAAATGGAATGGAGACAG+GGG | - | chr5_3:49719912-49719931 | None:intergenic | 40.0% | |
GAAGAAATGGAATGGAGACA+GGG | - | chr5_3:49719913-49719932 | None:intergenic | 40.0% | |
TGAAGAAATGGAATGGAGAC+AGG | - | chr5_3:49719914-49719933 | None:intergenic | 40.0% | |
TCAGAGCTTAGGTTCAAATC+AGG | + | chr5_3:49720004-49720023 | Msa0815960:intron | 40.0% | |
CAATATGGCAAGCACATCAA+TGG | + | chr5_3:49720284-49720303 | Msa0815960:intron | 40.0% | |
!! | GTGAGAGTGCCATTCAAAAT+TGG | + | chr5_3:49720414-49720433 | Msa0815960:intron | 40.0% |
! | GAAGAGAAGAAAGCATGGAA+AGG | + | chr5_3:49720634-49720653 | Msa0815960:intron | 40.0% |
GTCAAATCCTGTTGAAGAGA+GGG | + | chr5_3:49721103-49721122 | Msa0815960:intron | 40.0% | |
TCAAATCCTGTTGAAGAGAG+GGG | + | chr5_3:49721104-49721123 | Msa0815960:intron | 40.0% | |
ATTATGTGTTGCACACTCCA+TGG | + | chr5_3:49719104-49719123 | Msa0815960:intron | 40.0% | |
ATCAAGGAACGTAAGTTGCA+TGG | - | chr5_3:49719241-49719260 | None:intergenic | 40.0% | |
!!! | GTTCCTTGATAGTTTTGGAG+TGG | + | chr5_3:49719251-49719270 | Msa0815960:intron | 40.0% |
AGATTCACTAGCTCATCAAG+TGG | + | chr5_3:49719279-49719298 | Msa0815960:intron | 40.0% | |
GCAGCTGAGATTTCAAACCT+TGG | + | chr5_3:49714407-49714426 | Msa0815960:CDS | 45.0% | |
GATGATTAGAGCAGTAGCCA+AGG | - | chr5_3:49714427-49714446 | None:intergenic | 45.0% | |
GAAGGCTTCAACAGATAAGG+AGG | - | chr5_3:49714647-49714666 | None:intergenic | 45.0% | |
AACTGAACTCGATCGATCCT+CGG | - | chr5_3:49714861-49714880 | None:intergenic | 45.0% | |
ACGCTTGATTGCGGTTCAAT+CGG | - | chr5_3:49715184-49715203 | None:intergenic | 45.0% | |
GCAATCAAGCGTCTTAGAAG+AGG | + | chr5_3:49715192-49715211 | Msa0815960:CDS | 45.0% | |
GAACAAGAAAATGCTCCACC+AGG | + | chr5_3:49715733-49715752 | Msa0815960:CDS | 45.0% | |
!! | TAGGTTGGTTCTTCAGATGG+AGG | - | chr5_3:49716171-49716190 | None:intergenic | 45.0% |
!! | GAGTAGGTTGGTTCTTCAGA+TGG | - | chr5_3:49716174-49716193 | None:intergenic | 45.0% |
ATGCAATGCACTACATGCAG+AGG | + | chr5_3:49716583-49716602 | Msa0815960:CDS | 45.0% | |
TGAGGTAGAATACAGCGATC+CGG | + | chr5_3:49716671-49716690 | Msa0815960:CDS | 45.0% | |
AGCCGGTCGATTGTTAAAAC+CGG | - | chr5_3:49716693-49716712 | None:intergenic | 45.0% | |
! | GAGCTCTTTGTTCGGCTTTT+AGG | - | chr5_3:49716725-49716744 | None:intergenic | 45.0% |
! | AGCACTGAGAGCTCTTTGTT+CGG | - | chr5_3:49716733-49716752 | None:intergenic | 45.0% |
TACAAGGCTGCAGGAAGAAA+AGG | + | chr5_3:49716821-49716840 | Msa0815960:CDS | 45.0% | |
! | AGGTTGATCGCGTTTATGAC+AGG | + | chr5_3:49717591-49717610 | Msa0815960:CDS | 45.0% |
AATACTTCTCCAATGGAGGG+AGG | + | chr5_3:49718445-49718464 | Msa0815960:intron | 45.0% | |
! | CCACACATGATTTTCTCTCG+AGG | - | chr5_3:49718657-49718676 | None:intergenic | 45.0% |
CCTCGAGAGAAAATCATGTG+TGG | + | chr5_3:49718654-49718673 | Msa0815960:intron | 45.0% | |
GGAAACAACTTTGCTTTCCC+AGG | - | chr5_3:49718764-49718783 | None:intergenic | 45.0% | |
!!! | CTTTGCTTTTTACCTGCAGC+TGG | + | chr5_3:49718796-49718815 | Msa0815960:intron | 45.0% |
AGCCCACTCCAAAACTATCA+AGG | - | chr5_3:49719257-49719276 | None:intergenic | 45.0% | |
TCTTAGCACTCAAAGGCCAA+CGG | + | chr5_3:49719332-49719351 | Msa0815960:intron | 45.0% | |
GCTTCGTGACACTCATCATT+TGG | + | chr5_3:49719978-49719997 | Msa0815960:intron | 45.0% | |
TATGGCAAGCACATCAATGG+TGG | + | chr5_3:49720287-49720306 | Msa0815960:intron | 45.0% | |
! | GCACATCAATGGTGGAGAAA+TGG | + | chr5_3:49720295-49720314 | Msa0815960:intron | 45.0% |
GAATGGCACTCTCACTTGTT+TGG | - | chr5_3:49720409-49720428 | None:intergenic | 45.0% | |
AGCGAGAAGAGAAGAAAGCA+TGG | + | chr5_3:49720629-49720648 | Msa0815960:intron | 45.0% | |
GGTCAAATCCTGTTGAAGAG+AGG | + | chr5_3:49721102-49721121 | Msa0815960:intron | 45.0% | |
CAAATCCTGTTGAAGAGAGG+GGG | + | chr5_3:49721105-49721124 | Msa0815960:intron | 45.0% | |
CGTGTCATCTTGCTTCAGAT+TGG | + | chr5_3:49721234-49721253 | Msa0815960:intron | 45.0% | |
AGCCCACTCCAAAACTATCA+AGG | - | chr5_3:49719257-49719276 | None:intergenic | 45.0% | |
TCTTAGCACTCAAAGGCCAA+CGG | + | chr5_3:49719332-49719351 | Msa0815960:intron | 45.0% | |
GCTTCGTGACACTCATCATT+TGG | + | chr5_3:49719978-49719997 | Msa0815960:intron | 45.0% | |
TATGGCAAGCACATCAATGG+TGG | + | chr5_3:49720287-49720306 | Msa0815960:intron | 45.0% | |
! | GCACATCAATGGTGGAGAAA+TGG | + | chr5_3:49720295-49720314 | Msa0815960:intron | 45.0% |
GAATGGCACTCTCACTTGTT+TGG | - | chr5_3:49720409-49720428 | None:intergenic | 45.0% | |
AGCGAGAAGAGAAGAAAGCA+TGG | + | chr5_3:49720629-49720648 | Msa0815960:intron | 45.0% | |
GGTCAAATCCTGTTGAAGAG+AGG | + | chr5_3:49721102-49721121 | Msa0815960:intron | 45.0% | |
CAAATCCTGTTGAAGAGAGG+GGG | + | chr5_3:49721105-49721124 | Msa0815960:intron | 45.0% | |
CGTGTCATCTTGCTTCAGAT+TGG | + | chr5_3:49721234-49721253 | Msa0815960:intron | 45.0% | |
AGCCCACTCCAAAACTATCA+AGG | - | chr5_3:49719257-49719276 | None:intergenic | 45.0% | |
TCTTAGCACTCAAAGGCCAA+CGG | + | chr5_3:49719332-49719351 | Msa0815960:intron | 45.0% | |
!!! | TATTTTAATTAATAATTGTA+AGG | + | chr5_3:49719536-49719555 | Msa0815960:intron | 5.0% |
!! | CAAAAATAAAATAAATTAAA+AGG | - | chr5_3:49720040-49720059 | None:intergenic | 5.0% |
!!! | TATTTTAATTAATAATTGTA+AGG | + | chr5_3:49719536-49719555 | Msa0815960:intron | 5.0% |
!! | CAAAAATAAAATAAATTAAA+AGG | - | chr5_3:49720040-49720059 | None:intergenic | 5.0% |
TGAGGATCTAGAGGAGGAGA+AGG | + | chr5_3:49715129-49715148 | Msa0815960:CDS | 50.0% | |
TGCACTGTCTTTGTACCTGG+TGG | - | chr5_3:49715751-49715770 | None:intergenic | 50.0% | |
CCATGCACTGTCTTTGTACC+TGG | - | chr5_3:49715754-49715773 | None:intergenic | 50.0% | |
CCAGGTACAAAGACAGTGCA+TGG | + | chr5_3:49715751-49715770 | Msa0815960:intron | 50.0% | |
TCTGCTGACCTAGGAGTTTC+AGG | - | chr5_3:49716564-49716583 | None:intergenic | 50.0% | |
TGCATTGCATCTGCTGACCT+AGG | - | chr5_3:49716573-49716592 | None:intergenic | 50.0% | |
ATCAGGAGCAGAAGAATCCG+TGG | + | chr5_3:49716632-49716651 | Msa0815960:CDS | 50.0% | |
ACTTGCAACGCTACCATCCA+CGG | - | chr5_3:49716652-49716671 | None:intergenic | 50.0% | |
GGCAATGATTACAAGGCTGC+AGG | + | chr5_3:49716812-49716831 | Msa0815960:CDS | 50.0% | |
AAGGCTGCAGGAAGAAAAGG+CGG | + | chr5_3:49716824-49716843 | Msa0815960:CDS | 50.0% | |
AGAAAAGGCGGCAATGCAGA+TGG | + | chr5_3:49716836-49716855 | Msa0815960:CDS | 50.0% | |
TGACAGTTCATCGGTGTAGC+CGG | - | chr5_3:49717099-49717118 | None:intergenic | 50.0% | |
TAAATCCCTCCTCCCTCCAT+TGG | - | chr5_3:49718457-49718476 | None:intergenic | 50.0% | |
ATGGAGGGAGGAGGGATTTA+TGG | + | chr5_3:49718457-49718476 | Msa0815960:intron | 50.0% | |
TGATTAGGTGGCGTTTAGCC+TGG | + | chr5_3:49718743-49718762 | Msa0815960:intron | 50.0% | |
GATTAGGTGGCGTTTAGCCT+GGG | + | chr5_3:49718744-49718763 | Msa0815960:intron | 50.0% | |
CATGGGATACATCTGACCGT+TGG | - | chr5_3:49719351-49719370 | None:intergenic | 50.0% | |
CAACGGTCAGATGTATCCCA+TGG | + | chr5_3:49719349-49719368 | Msa0815960:intron | 50.0% | |
GGTGGAGAAATGGAGACTTC+AGG | + | chr5_3:49720305-49720324 | Msa0815960:intron | 50.0% | |
TCATTCCCCCTCTCTTCAAC+AGG | - | chr5_3:49721113-49721132 | None:intergenic | 50.0% | |
CATGGGATACATCTGACCGT+TGG | - | chr5_3:49719351-49719370 | None:intergenic | 50.0% | |
CAACGGTCAGATGTATCCCA+TGG | + | chr5_3:49719349-49719368 | Msa0815960:intron | 50.0% | |
GGTGGAGAAATGGAGACTTC+AGG | + | chr5_3:49720305-49720324 | Msa0815960:intron | 50.0% | |
TCATTCCCCCTCTCTTCAAC+AGG | - | chr5_3:49721113-49721132 | None:intergenic | 50.0% | |
CATGGGATACATCTGACCGT+TGG | - | chr5_3:49719351-49719370 | None:intergenic | 50.0% | |
CAACGGTCAGATGTATCCCA+TGG | + | chr5_3:49719349-49719368 | Msa0815960:intron | 50.0% | |
TATTCTCAGAGAGGTGGCCG+AGG | + | chr5_3:49714841-49714860 | Msa0815960:CDS | 55.0% | |
CGGTTCAATCGGTGACTCAC+TGG | - | chr5_3:49715173-49715192 | None:intergenic | 55.0% | |
GGAGCAGAAGAATCCGTGGA+TGG | + | chr5_3:49716636-49716655 | Msa0815960:CDS | 55.0% | |
! | GGATGGTAGCGTTGCAAGTG+AGG | + | chr5_3:49716653-49716672 | Msa0815960:CDS | 55.0% |
CAACCTTGTTCCGACCCGAT+TGG | - | chr5_3:49718042-49718061 | None:intergenic | 55.0% | |
ACTTCTCCAATGGAGGGAGG+AGG | + | chr5_3:49718448-49718467 | Msa0815960:intron | 55.0% | |
CTTCTCCAATGGAGGGAGGA+GGG | + | chr5_3:49718449-49718468 | Msa0815960:intron | 55.0% | |
AGGTCATTACTGCCAGCTGC+AGG | - | chr5_3:49718811-49718830 | None:intergenic | 55.0% | |
TTGATAAGCCGGTGGATGCG+AGG | - | chr5_3:49719861-49719880 | None:intergenic | 55.0% | |
GATGAGTGTCACGAAGCCGT+CGG | - | chr5_3:49719975-49719994 | None:intergenic | 55.0% | |
GCTCGACATTGTTGCTGCCA+TGG | - | chr5_3:49720507-49720526 | None:intergenic | 55.0% | |
TTGATAAGCCGGTGGATGCG+AGG | - | chr5_3:49719861-49719880 | None:intergenic | 55.0% | |
GATGAGTGTCACGAAGCCGT+CGG | - | chr5_3:49719975-49719994 | None:intergenic | 55.0% | |
GCTCGACATTGTTGCTGCCA+TGG | - | chr5_3:49720507-49720526 | None:intergenic | 55.0% | |
!! | GATTGGCCTGGTGGCTAGTC+GGG | - | chr5_3:49718025-49718044 | None:intergenic | 60.0% |
!! | CGATTGGCCTGGTGGCTAGT+CGG | - | chr5_3:49718026-49718045 | None:intergenic | 60.0% |
! | CGACTAGCCACCAGGCCAAT+CGG | + | chr5_3:49718024-49718043 | Msa0815960:intron | 60.0% |
! | GACTAGCCACCAGGCCAATC+GGG | + | chr5_3:49718025-49718044 | Msa0815960:intron | 60.0% |
! | TTGTTCCGACCCGATTGGCC+TGG | - | chr5_3:49718037-49718056 | None:intergenic | 60.0% |
AGGCCAATCGGGTCGGAACA+AGG | + | chr5_3:49718036-49718055 | Msa0815960:intron | 60.0% | |
AGCCACCAGGCCAATCGGGT+CGG | + | chr5_3:49718029-49718048 | Msa0815960:intron | 65.0% | |
!! | TTCCGACCCGATTGGCCTGG+TGG | - | chr5_3:49718034-49718053 | None:intergenic | 65.0% |
GTGGCGATCCTCGCATCCAC+CGG | + | chr5_3:49719850-49719869 | Msa0815960:intron | 65.0% | |
GTGGCGATCCTCGCATCCAC+CGG | + | chr5_3:49719850-49719869 | Msa0815960:intron | 65.0% | |
! | GCTCGGCCCGACTAGCCACC+AGG | + | chr5_3:49718016-49718035 | Msa0815960:intron | 75.0% |
Chromosome | Type | Strat | End | Strand | Name |
---|---|---|---|---|---|
chr5_3 | gene | 49714103 | 49723684 | 49714103 | ID=Msa0815960;Name=Msa0815960 |
chr5_3 | mRNA | 49714103 | 49723684 | 49714103 | ID=Msa0815960-mRNA-1;Parent=Msa0815960;Name=Msa0815960-mRNA-1;_AED=0.15;_eAED=0.15;_QI=52|1|1|1|0.6|0.5|6|479|988 |
chr5_3 | exon | 49714103 | 49715394 | 49714103 | ID=Msa0815960-mRNA-1:exon:14976;Parent=Msa0815960-mRNA-1 |
chr5_3 | exon | 49715548 | 49715754 | 49715548 | ID=Msa0815960-mRNA-1:exon:14977;Parent=Msa0815960-mRNA-1 |
chr5_3 | exon | 49716160 | 49716294 | 49716160 | ID=Msa0815960-mRNA-1:exon:14978;Parent=Msa0815960-mRNA-1 |
chr5_3 | exon | 49716430 | 49717821 | 49716430 | ID=Msa0815960-mRNA-1:exon:14979;Parent=Msa0815960-mRNA-1 |
chr5_3 | exon | 49721320 | 49721546 | 49721320 | ID=Msa0815960-mRNA-1:exon:14980;Parent=Msa0815960-mRNA-1 |
chr5_3 | exon | 49723440 | 49723684 | 49723440 | ID=Msa0815960-mRNA-1:exon:14981;Parent=Msa0815960-mRNA-1 |
chr5_3 | five_prime_UTR | 49714103 | 49714154 | 49714103 | ID=Msa0815960-mRNA-1:five_prime_utr;Parent=Msa0815960-mRNA-1 |
chr5_3 | CDS | 49714155 | 49715394 | 49714155 | ID=Msa0815960-mRNA-1:cds;Parent=Msa0815960-mRNA-1 |
chr5_3 | CDS | 49715548 | 49715754 | 49715548 | ID=Msa0815960-mRNA-1:cds;Parent=Msa0815960-mRNA-1 |
chr5_3 | CDS | 49716160 | 49716294 | 49716160 | ID=Msa0815960-mRNA-1:cds;Parent=Msa0815960-mRNA-1 |
chr5_3 | CDS | 49716430 | 49717814 | 49716430 | ID=Msa0815960-mRNA-1:cds;Parent=Msa0815960-mRNA-1 |
chr5_3 | three_prime_UTR | 49717815 | 49717821 | 49717815 | ID=Msa0815960-mRNA-1:three_prime_utr;Parent=Msa0815960-mRNA-1 |
chr5_3 | three_prime_UTR | 49721320 | 49721546 | 49721320 | ID=Msa0815960-mRNA-1:three_prime_utr;Parent=Msa0815960-mRNA-1 |
chr5_3 | three_prime_UTR | 49723440 | 49723684 | 49723440 | ID=Msa0815960-mRNA-1:three_prime_utr;Parent=Msa0815960-mRNA-1 |
Gene Sequence |
Protein sequence |