Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0320670 | XP_024633068.1 | 97.955 | 489 | 10 | 0 | 1 | 489 | 1 | 489 | 0.0 | 986 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0320670 | sp|Q9LUS8|P2C40_ARATH | 65.854 | 492 | 157 | 7 | 4 | 489 | 7 | 493 | 0.0 | 609 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa0030300 | Msa0320670 | 0.812795 | 3.541489e-51 | -8.615850e-47 |
| Msa0071250 | Msa0320670 | 0.847092 | 1.438849e-59 | -8.615850e-47 |
| Msa0090550 | Msa0320670 | 0.803796 | 2.938380e-49 | -8.615850e-47 |
| Msa0092170 | Msa0320670 | 0.800297 | 1.539705e-48 | -8.615850e-47 |
| Msa0138020 | Msa0320670 | 0.812132 | 4.944144e-51 | -8.615850e-47 |
| Msa0142500 | Msa0320670 | 0.816725 | 4.768673e-52 | -8.615850e-47 |
| Msa0149440 | Msa0320670 | 0.803009 | 4.276371e-49 | -8.615850e-47 |
| Msa0180510 | Msa0320670 | -0.800641 | 1.309962e-48 | -8.615850e-47 |
| Msa0187490 | Msa0320670 | 0.807443 | 5.043477e-50 | -8.615850e-47 |
| Msa0197610 | Msa0320670 | 0.828618 | 8.134779e-55 | -8.615850e-47 |
| Msa0207030 | Msa0320670 | 0.819324 | 1.232854e-52 | -8.615850e-47 |
| Msa0285330 | Msa0320670 | 0.832200 | 1.082470e-55 | -8.615850e-47 |
| Msa0296980 | Msa0320670 | -0.807860 | 4.112067e-50 | -8.615850e-47 |
| Msa0320670 | Msa0324240 | 0.801692 | 7.984773e-49 | -8.615850e-47 |
| Msa0320670 | Msa0379260 | 0.800954 | 1.131097e-48 | -8.615850e-47 |
| Msa0320670 | Msa0381000 | 0.805118 | 1.557979e-49 | -8.615850e-47 |
| Msa0320670 | Msa0403770 | 0.804538 | 2.059328e-49 | -8.615850e-47 |
| Msa0320670 | Msa0408390 | 0.814395 | 1.574946e-51 | -8.615850e-47 |
| Msa0320670 | Msa0422180 | 0.809057 | 2.284256e-50 | -8.615850e-47 |
| Msa0320670 | Msa0427580 | 0.802594 | 5.210672e-49 | -8.615850e-47 |
| Msa0320670 | Msa0430870 | 0.807731 | 4.380263e-50 | -8.615850e-47 |
| Msa0320670 | Msa0481280 | 0.835377 | 1.738351e-56 | -8.615850e-47 |
| Msa0320670 | Msa0482040 | 0.803827 | 2.895339e-49 | -8.615850e-47 |
| Msa0320670 | Msa0518170 | 0.822963 | 1.787558e-53 | -8.615850e-47 |
| Msa0320670 | Msa0526020 | 0.815235 | 1.025492e-51 | -8.615850e-47 |
| Msa0320670 | Msa0566350 | 0.803052 | 4.190075e-49 | -8.615850e-47 |
| Msa0320670 | Msa0566750 | 0.804299 | 2.309231e-49 | -8.615850e-47 |
| Msa0320670 | Msa0569780 | 0.813737 | 2.200108e-51 | -8.615850e-47 |
| Msa0320670 | Msa0600080 | 0.800452 | 1.431767e-48 | -8.615850e-47 |
| Msa0320670 | Msa0600450 | 0.809655 | 1.699318e-50 | -8.615850e-47 |
| Msa0320670 | Msa0640940 | 0.818315 | 2.089567e-52 | -8.615850e-47 |
| Msa0320670 | Msa0643320 | 0.818496 | 1.902184e-52 | -8.615850e-47 |
| Msa0320670 | Msa0654620 | 0.812951 | 3.273213e-51 | -8.615850e-47 |
| Msa0320670 | Msa0659210 | 0.809045 | 2.297762e-50 | -8.615850e-47 |
| Msa0320670 | Msa0679360 | 0.812102 | 5.019757e-51 | -8.615850e-47 |
| Msa0320670 | Msa0683140 | 0.812832 | 3.475760e-51 | -8.615850e-47 |
| Msa0320670 | Msa0683600 | 0.812416 | 4.286459e-51 | -8.615850e-47 |
| Msa0320670 | Msa0689440 | 0.800718 | 1.263533e-48 | -8.615850e-47 |
| Msa0320670 | Msa0689780 | 0.809062 | 2.278067e-50 | -8.615850e-47 |
| Msa0320670 | Msa0698410 | 0.801817 | 7.530093e-49 | -8.615850e-47 |
| Msa0320670 | Msa0703910 | 0.801364 | 9.321867e-49 | -8.615850e-47 |
| Msa0320670 | Msa0705190 | 0.804068 | 2.580059e-49 | -8.615850e-47 |
| Msa0320670 | Msa0705990 | 0.854742 | 1.005341e-61 | -8.615850e-47 |
| Msa0320670 | Msa0709160 | 0.810962 | 8.879415e-51 | -8.615850e-47 |
| Msa0320670 | Msa0721340 | 0.822130 | 2.793113e-53 | -8.615850e-47 |
| Msa0320670 | Msa0750850 | 0.818343 | 2.059595e-52 | -8.615850e-47 |
| Msa0320670 | Msa0760350 | 0.812742 | 3.638545e-51 | -8.615850e-47 |
| Msa0320670 | Msa0763920 | 0.802624 | 5.134870e-49 | -8.615850e-47 |
| Msa0320670 | Msa0765180 | 0.814551 | 1.454530e-51 | -8.615850e-47 |
| Msa0320670 | Msa0767370 | 0.802279 | 6.048930e-49 | -8.615850e-47 |
| Msa0320670 | Msa0798290 | 0.808875 | 2.498595e-50 | -8.615850e-47 |
| Msa0320670 | Msa0800370 | 0.800350 | 1.502012e-48 | -8.615850e-47 |
| Msa0320670 | Msa0801730 | 0.821093 | 4.849447e-53 | -8.615850e-47 |
| Msa0320670 | Msa0844110 | 0.811830 | 5.753790e-51 | -8.615850e-47 |
| Msa0320670 | Msa0861470 | 0.815632 | 8.371614e-52 | -8.615850e-47 |
| Msa0320670 | Msa0861570 | 0.818197 | 2.222562e-52 | -8.615850e-47 |
| Msa0320670 | Msa0880810 | 0.829786 | 4.235268e-55 | -8.615850e-47 |
| Msa0320670 | Msa0905750 | 0.808075 | 3.701366e-50 | -8.615850e-47 |
| Msa0320670 | Msa0918390 | 0.807886 | 4.060743e-50 | -8.615850e-47 |
| Msa0320670 | Msa0947800 | 0.800784 | 1.225241e-48 | -8.615850e-47 |
| Msa0320670 | Msa0970530 | 0.807648 | 4.562027e-50 | -8.615850e-47 |
| Msa0320670 | Msa0970600 | 0.803530 | 3.336202e-49 | -8.615850e-47 |
| Msa0320670 | Msa0974950 | 0.802231 | 6.189032e-49 | -8.615850e-47 |
| Msa0320670 | Msa0992580 | 0.807069 | 6.051381e-50 | -8.615850e-47 |
| Msa0320670 | Msa0992600 | 0.823579 | 1.284037e-53 | -8.615850e-47 |
| Msa0320670 | Msa0994370 | 0.828527 | 8.557952e-55 | -8.615850e-47 |
| Msa0320670 | Msa1034280 | 0.809113 | 2.221606e-50 | -8.615850e-47 |
| Msa0320670 | Msa1042660 | 0.836152 | 1.106007e-56 | -8.615850e-47 |
| Msa0320670 | Msa1063420 | 0.843265 | 1.558561e-58 | -8.615850e-47 |
| Msa0320670 | Msa1068870 | 0.801997 | 6.915167e-49 | -8.615850e-47 |
| Msa0320670 | Msa1071320 | 0.823836 | 1.117537e-53 | -8.615850e-47 |
| Msa0320670 | Msa1072900 | 0.825805 | 3.837058e-54 | -8.615850e-47 |
| Msa0320670 | Msa1081790 | -0.841185 | 5.537959e-58 | -8.615850e-47 |
| Msa0320670 | Msa1093100 | 0.827082 | 1.903366e-54 | -8.615850e-47 |
| Msa0320670 | Msa1130530 | 0.800431 | 1.445870e-48 | -8.615850e-47 |
| Msa0320670 | Msa1143020 | 0.809864 | 1.532208e-50 | -8.615850e-47 |
| Msa0320670 | Msa1144040 | 0.838122 | 3.468185e-57 | -8.615850e-47 |
| Msa0320670 | Msa1166090 | -0.833219 | 6.048697e-56 | -8.615850e-47 |
| Msa0320670 | Msa1188600 | -0.821004 | 5.082725e-53 | -8.615850e-47 |
| Msa0320670 | Msa1207310 | 0.802162 | 6.395525e-49 | -8.615850e-47 |
| Msa0320670 | Msa1207350 | 0.840154 | 1.031393e-57 | -8.615850e-47 |
| Msa0320670 | Msa1218580 | 0.826114 | 3.240398e-54 | -8.615850e-47 |
| Msa0320670 | Msa1250110 | 0.819631 | 1.049648e-52 | -8.615850e-47 |
| Msa0320670 | Msa1250730 | 0.809506 | 1.829404e-50 | -8.615850e-47 |
| Msa0320670 | Msa1270660 | 0.827783 | 1.292558e-54 | -8.615850e-47 |
| Msa0320670 | Msa1270730 | 0.823287 | 1.502558e-53 | -8.615850e-47 |
| Msa0320670 | Msa1295330 | 0.800385 | 1.477817e-48 | -8.615850e-47 |
| Msa0320670 | Msa1332050 | 0.804934 | 1.702031e-49 | -8.615850e-47 |
| Msa0320670 | Msa1396400 | -0.828161 | 1.048364e-54 | -8.615850e-47 |
| Msa0320670 | Msa1407970 | 0.819113 | 1.377042e-52 | -8.615850e-47 |
| Msa0320670 | Msa1420270 | 0.812583 | 3.941590e-51 | -8.615850e-47 |
| Msa0320670 | Msa1428780 | 0.823521 | 1.324557e-53 | -8.615850e-47 |
| Msa0320670 | Msa1436600 | 0.821743 | 3.432196e-53 | -8.615850e-47 |
| Msa0320670 | Msa1442790 | 0.809544 | 1.795643e-50 | -8.615850e-47 |
| Msa0320670 | Msa1454960 | 0.819682 | 1.021483e-52 | -8.615850e-47 |
| Msa0320670 | Msa1465610 | -0.808766 | 2.635468e-50 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0320670 | MtrunA17_Chr2g0295991 | 97.955 | 489 | 10 | 0 | 1 | 489 | 1 | 489 | 0.0 | 986 |
| Msa0320670 | MtrunA17_Chr4g0067301 | 74.303 | 502 | 114 | 4 | 1 | 489 | 1 | 500 | 0.0 | 706 |
| Msa0320670 | MtrunA17_Chr7g0223641 | 59.664 | 238 | 57 | 6 | 258 | 487 | 1 | 207 | 1.35e-80 | 249 |
| Msa0320670 | MtrunA17_Chr7g0238501 | 36.997 | 373 | 205 | 5 | 106 | 476 | 202 | 546 | 3.33e-78 | 254 |
| Msa0320670 | MtrunA17_Chr4g0039061 | 39.296 | 341 | 173 | 3 | 136 | 474 | 172 | 480 | 7.34e-76 | 246 |
| Msa0320670 | MtrunA17_Chr4g0031521 | 39.130 | 299 | 150 | 4 | 210 | 476 | 397 | 695 | 2.98e-62 | 215 |
| Msa0320670 | MtrunA17_Chr4g0031521 | 47.945 | 73 | 38 | 0 | 137 | 209 | 258 | 330 | 4.78e-14 | 74.7 |
| Msa0320670 | MtrunA17_Chr4g0054811 | 40.000 | 290 | 127 | 3 | 234 | 476 | 478 | 767 | 1.10e-59 | 209 |
| Msa0320670 | MtrunA17_Chr4g0054811 | 54.098 | 61 | 28 | 0 | 140 | 200 | 256 | 316 | 9.72e-14 | 73.9 |
| Msa0320670 | MtrunA17_Chr1g0193691 | 47.674 | 172 | 90 | 0 | 305 | 476 | 712 | 883 | 9.37e-48 | 177 |
| Msa0320670 | MtrunA17_Chr1g0193691 | 50.746 | 67 | 33 | 0 | 142 | 208 | 289 | 355 | 7.20e-14 | 74.3 |
| Msa0320670 | MtrunA17_Chr1g0213351 | 32.622 | 328 | 174 | 7 | 166 | 487 | 80 | 366 | 1.92e-47 | 168 |
| Msa0320670 | MtrunA17_Chr8g0371321 | 32.915 | 319 | 168 | 6 | 166 | 479 | 79 | 356 | 1.31e-45 | 164 |
| Msa0320670 | MtrunA17_Chr7g0250061 | 34.058 | 276 | 166 | 5 | 213 | 479 | 85 | 353 | 1.81e-44 | 160 |
| Msa0320670 | MtrunA17_Chr7g0263281 | 32.595 | 316 | 167 | 7 | 166 | 476 | 71 | 345 | 1.29e-41 | 152 |
| Msa0320670 | MtrunA17_Chr3g0089721 | 29.847 | 392 | 215 | 11 | 99 | 476 | 1 | 346 | 1.60e-40 | 149 |
| Msa0320670 | MtrunA17_Chr7g0256751 | 33.531 | 337 | 169 | 11 | 151 | 476 | 55 | 347 | 1.68e-40 | 151 |
| Msa0320670 | MtrunA17_Chr3g0089711 | 29.592 | 392 | 216 | 11 | 99 | 476 | 1 | 346 | 1.94e-40 | 149 |
| Msa0320670 | MtrunA17_Chr1g0211251 | 31.193 | 327 | 179 | 6 | 166 | 487 | 81 | 366 | 9.42e-40 | 148 |
| Msa0320670 | MtrunA17_Chr2g0294291 | 30.368 | 326 | 180 | 6 | 158 | 476 | 65 | 350 | 4.42e-37 | 140 |
| Msa0320670 | MtrunA17_Chr3g0089691 | 34.137 | 249 | 145 | 5 | 238 | 476 | 21 | 260 | 7.99e-37 | 137 |
| Msa0320670 | MtrunA17_Chr1g0207571 | 33.594 | 256 | 152 | 5 | 237 | 483 | 98 | 344 | 2.88e-35 | 135 |
| Msa0320670 | MtrunA17_Chr1g0181901 | 29.155 | 343 | 172 | 8 | 166 | 476 | 76 | 379 | 7.18e-35 | 134 |
| Msa0320670 | MtrunA17_Chr1g0175381 | 28.076 | 317 | 181 | 6 | 165 | 476 | 78 | 352 | 1.21e-32 | 128 |
| Msa0320670 | MtrunA17_Chr7g0256771 | 29.577 | 284 | 155 | 6 | 144 | 421 | 49 | 293 | 7.81e-30 | 119 |
| Msa0320670 | MtrunA17_Chr4g0063111 | 28.834 | 326 | 176 | 9 | 165 | 482 | 73 | 350 | 3.66e-24 | 105 |
| Msa0320670 | MtrunA17_Chr4g0063051 | 28.571 | 315 | 156 | 9 | 165 | 476 | 60 | 308 | 4.21e-24 | 103 |
| Msa0320670 | MtrunA17_Chr7g0256761 | 30.435 | 184 | 106 | 5 | 300 | 477 | 14 | 181 | 1.67e-17 | 80.9 |
| Msa0320670 | MtrunA17_Chr1g0151781 | 29.151 | 271 | 134 | 12 | 161 | 419 | 64 | 288 | 3.72e-16 | 79.7 |
| Msa0320670 | MtrunA17_Chr2g0317021 | 27.356 | 329 | 132 | 12 | 153 | 476 | 106 | 332 | 3.92e-15 | 76.6 |
| Msa0320670 | MtrunA17_Chr3g0136711 | 26.190 | 336 | 151 | 12 | 151 | 486 | 52 | 290 | 1.76e-14 | 73.9 |
| Msa0320670 | MtrunA17_Chr7g0221691 | 27.852 | 298 | 167 | 12 | 158 | 440 | 122 | 386 | 2.48e-14 | 75.1 |
| Msa0320670 | MtrunA17_Chr1g0150451 | 25.352 | 355 | 165 | 14 | 115 | 445 | 35 | 313 | 9.49e-14 | 72.4 |
| Msa0320670 | MtrunA17_Chr2g0295401 | 32.402 | 179 | 87 | 6 | 254 | 421 | 160 | 315 | 1.10e-12 | 69.3 |
| Msa0320670 | MtrunA17_Chr4g0022171 | 27.037 | 270 | 152 | 10 | 165 | 421 | 95 | 332 | 1.56e-12 | 69.7 |
| Msa0320670 | MtrunA17_Chr7g0249421 | 26.056 | 284 | 160 | 11 | 158 | 419 | 89 | 344 | 1.63e-12 | 69.7 |
| Msa0320670 | MtrunA17_Chr8g0360351 | 25.000 | 320 | 135 | 10 | 160 | 474 | 60 | 279 | 2.93e-12 | 67.4 |
| Msa0320670 | MtrunA17_Chr8g0342431 | 30.653 | 199 | 99 | 8 | 252 | 441 | 184 | 352 | 3.02e-12 | 68.2 |
| Msa0320670 | MtrunA17_Chr4g0067711 | 31.414 | 191 | 96 | 8 | 268 | 447 | 175 | 341 | 3.15e-12 | 68.2 |
| Msa0320670 | MtrunA17_Chr5g0407161 | 26.855 | 283 | 127 | 12 | 166 | 442 | 124 | 332 | 3.82e-12 | 67.8 |
| Msa0320670 | MtrunA17_Chr7g0272061 | 26.408 | 284 | 161 | 9 | 165 | 437 | 90 | 336 | 4.17e-12 | 67.8 |
| Msa0320670 | MtrunA17_Chr1g0192421 | 27.465 | 284 | 149 | 12 | 165 | 437 | 88 | 325 | 5.79e-12 | 67.0 |
| Msa0320670 | MtrunA17_Chr2g0293811 | 27.562 | 283 | 133 | 10 | 166 | 443 | 100 | 315 | 8.54e-12 | 66.6 |
| Msa0320670 | MtrunA17_Chr4g0051661 | 25.725 | 276 | 123 | 9 | 151 | 420 | 166 | 365 | 1.38e-11 | 66.2 |
| Msa0320670 | MtrunA17_Chr4g0004971 | 26.870 | 361 | 179 | 17 | 117 | 447 | 18 | 323 | 6.37e-11 | 63.9 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0320670 | AT3G16560.1 | 65.854 | 492 | 157 | 7 | 4 | 489 | 7 | 493 | 0.0 | 609 |
| Msa0320670 | AT3G16560.4 | 65.854 | 492 | 157 | 7 | 4 | 489 | 7 | 493 | 0.0 | 609 |
| Msa0320670 | AT3G16560.2 | 65.854 | 492 | 157 | 7 | 4 | 489 | 7 | 493 | 0.0 | 609 |
| Msa0320670 | AT3G16560.3 | 65.632 | 451 | 144 | 7 | 4 | 448 | 7 | 452 | 0.0 | 545 |
| Msa0320670 | AT1G07630.1 | 38.129 | 417 | 195 | 7 | 123 | 476 | 237 | 653 | 2.05e-80 | 263 |
| Msa0320670 | AT3G09400.1 | 36.691 | 417 | 194 | 6 | 125 | 476 | 230 | 641 | 3.92e-80 | 262 |
| Msa0320670 | AT5G02400.1 | 36.516 | 419 | 184 | 6 | 138 | 476 | 249 | 665 | 1.48e-79 | 261 |
| Msa0320670 | AT2G28890.1 | 36.500 | 400 | 194 | 4 | 137 | 476 | 246 | 645 | 3.39e-79 | 260 |
| Msa0320670 | AT3G09400.2 | 35.219 | 389 | 182 | 6 | 125 | 448 | 230 | 613 | 2.08e-67 | 228 |
| Msa0320670 | AT2G46920.3 | 36.027 | 297 | 136 | 2 | 234 | 476 | 539 | 835 | 2.00e-57 | 204 |
| Msa0320670 | AT2G46920.3 | 55.932 | 59 | 26 | 0 | 142 | 200 | 278 | 336 | 2.20e-13 | 73.2 |
| Msa0320670 | AT2G46920.1 | 36.027 | 297 | 136 | 2 | 234 | 476 | 539 | 835 | 2.00e-57 | 204 |
| Msa0320670 | AT2G46920.1 | 55.932 | 59 | 26 | 0 | 142 | 200 | 278 | 336 | 2.20e-13 | 73.2 |
| Msa0320670 | AT2G46920.2 | 36.027 | 297 | 136 | 2 | 234 | 476 | 539 | 835 | 2.00e-57 | 204 |
| Msa0320670 | AT2G46920.2 | 55.932 | 59 | 26 | 0 | 142 | 200 | 278 | 336 | 2.20e-13 | 73.2 |
| Msa0320670 | AT2G46920.4 | 36.027 | 297 | 136 | 2 | 234 | 476 | 539 | 835 | 2.00e-57 | 204 |
| Msa0320670 | AT2G46920.4 | 55.932 | 59 | 26 | 0 | 142 | 200 | 278 | 336 | 2.20e-13 | 73.2 |
| Msa0320670 | AT2G35350.1 | 35.474 | 327 | 162 | 5 | 199 | 480 | 452 | 774 | 1.02e-55 | 199 |
| Msa0320670 | AT2G35350.1 | 46.753 | 77 | 36 | 1 | 141 | 212 | 265 | 341 | 2.83e-13 | 72.8 |
| Msa0320670 | AT3G12620.2 | 33.544 | 316 | 164 | 7 | 166 | 476 | 83 | 357 | 9.65e-46 | 164 |
| Msa0320670 | AT3G12620.1 | 33.544 | 316 | 164 | 7 | 166 | 476 | 83 | 357 | 9.65e-46 | 164 |
| Msa0320670 | AT3G55050.1 | 31.611 | 329 | 179 | 6 | 166 | 489 | 84 | 371 | 1.08e-44 | 161 |
| Msa0320670 | AT3G55050.2 | 31.611 | 329 | 179 | 6 | 166 | 489 | 84 | 371 | 1.08e-44 | 161 |
| Msa0320670 | AT4G38520.2 | 34.420 | 276 | 165 | 5 | 213 | 479 | 90 | 358 | 3.00e-42 | 155 |
| Msa0320670 | AT4G38520.1 | 34.420 | 276 | 165 | 5 | 213 | 479 | 90 | 358 | 3.00e-42 | 155 |
| Msa0320670 | AT3G51370.1 | 33.000 | 300 | 184 | 6 | 194 | 483 | 68 | 360 | 8.09e-42 | 153 |
| Msa0320670 | AT3G51370.3 | 33.000 | 300 | 184 | 6 | 194 | 483 | 68 | 360 | 8.09e-42 | 153 |
| Msa0320670 | AT5G66080.2 | 35.743 | 249 | 148 | 4 | 236 | 479 | 14 | 255 | 1.89e-41 | 150 |
| Msa0320670 | AT3G51370.2 | 34.783 | 253 | 153 | 4 | 236 | 483 | 30 | 275 | 2.30e-41 | 150 |
| Msa0320670 | AT5G66080.1 | 33.803 | 284 | 172 | 5 | 213 | 487 | 91 | 367 | 5.88e-41 | 151 |
| Msa0320670 | AT3G17090.1 | 29.430 | 316 | 177 | 7 | 166 | 476 | 84 | 358 | 2.59e-37 | 141 |
| Msa0320670 | AT5G02760.1 | 29.114 | 316 | 176 | 6 | 166 | 476 | 72 | 344 | 4.87e-36 | 137 |
| Msa0320670 | AT5G06750.3 | 28.660 | 321 | 184 | 6 | 162 | 476 | 78 | 359 | 4.59e-34 | 132 |
| Msa0320670 | AT5G06750.1 | 28.660 | 321 | 184 | 6 | 162 | 476 | 78 | 359 | 4.59e-34 | 132 |
| Msa0320670 | AT4G33920.2 | 32.567 | 261 | 157 | 4 | 236 | 486 | 14 | 265 | 6.04e-34 | 130 |
| Msa0320670 | AT4G33920.1 | 30.851 | 282 | 176 | 4 | 218 | 489 | 79 | 351 | 8.10e-34 | 131 |
| Msa0320670 | AT5G06750.2 | 32.114 | 246 | 156 | 4 | 237 | 476 | 37 | 277 | 7.23e-33 | 127 |
| Msa0320670 | AT4G33920.3 | 33.197 | 244 | 144 | 4 | 253 | 486 | 1 | 235 | 2.35e-31 | 122 |
| Msa0320670 | AT3G17090.2 | 28.626 | 262 | 145 | 5 | 166 | 422 | 84 | 308 | 1.40e-28 | 115 |
| Msa0320670 | AT5G26010.1 | 31.902 | 163 | 79 | 5 | 268 | 421 | 146 | 285 | 1.06e-14 | 75.5 |
| Msa0320670 | AT4G31750.2 | 28.846 | 208 | 110 | 6 | 238 | 445 | 101 | 270 | 4.48e-14 | 73.6 |
| Msa0320670 | AT4G31750.1 | 28.846 | 208 | 110 | 6 | 238 | 445 | 101 | 270 | 5.58e-14 | 73.2 |
| Msa0320670 | AT4G31750.3 | 28.846 | 208 | 110 | 6 | 238 | 445 | 101 | 270 | 5.58e-14 | 73.2 |
| Msa0320670 | AT5G10740.1 | 26.510 | 298 | 135 | 12 | 151 | 444 | 51 | 268 | 1.04e-13 | 72.8 |
| Msa0320670 | AT5G10740.2 | 26.510 | 298 | 135 | 12 | 151 | 444 | 51 | 268 | 1.04e-13 | 72.8 |
| Msa0320670 | AT5G59220.1 | 33.939 | 165 | 69 | 6 | 260 | 419 | 213 | 342 | 2.59e-13 | 72.0 |
| Msa0320670 | AT1G67820.2 | 25.391 | 256 | 116 | 8 | 166 | 419 | 115 | 297 | 2.91e-13 | 72.0 |
| Msa0320670 | AT1G43900.1 | 26.909 | 275 | 127 | 8 | 148 | 420 | 134 | 336 | 3.84e-13 | 71.2 |
| Msa0320670 | AT1G67820.1 | 25.391 | 256 | 116 | 8 | 166 | 419 | 151 | 333 | 3.95e-13 | 71.6 |
| Msa0320670 | AT5G24940.1 | 26.190 | 294 | 141 | 10 | 151 | 444 | 51 | 268 | 5.37e-13 | 71.2 |
| Msa0320670 | AT4G32950.1 | 32.530 | 166 | 80 | 6 | 263 | 419 | 134 | 276 | 7.36e-13 | 70.1 |
| Msa0320670 | AT1G79630.6 | 30.726 | 179 | 90 | 5 | 254 | 421 | 96 | 251 | 8.25e-13 | 70.5 |
| Msa0320670 | AT1G79630.3 | 30.726 | 179 | 90 | 5 | 254 | 421 | 96 | 251 | 8.25e-13 | 70.5 |
| Msa0320670 | AT1G79630.4 | 30.726 | 179 | 90 | 5 | 254 | 421 | 96 | 251 | 8.25e-13 | 70.5 |
| Msa0320670 | AT1G79630.5 | 30.726 | 179 | 90 | 5 | 254 | 421 | 96 | 251 | 8.25e-13 | 70.5 |
| Msa0320670 | AT1G16220.1 | 31.902 | 163 | 79 | 4 | 268 | 421 | 199 | 338 | 8.84e-13 | 70.9 |
| Msa0320670 | AT1G79630.2 | 30.726 | 179 | 90 | 5 | 254 | 421 | 136 | 291 | 9.93e-13 | 70.5 |
| Msa0320670 | AT1G79630.7 | 30.726 | 179 | 90 | 5 | 254 | 421 | 136 | 291 | 9.93e-13 | 70.5 |
| Msa0320670 | AT1G79630.1 | 30.726 | 179 | 90 | 5 | 254 | 421 | 206 | 361 | 1.08e-12 | 70.5 |
| Msa0320670 | AT1G79630.8 | 30.726 | 179 | 90 | 5 | 254 | 421 | 202 | 357 | 1.10e-12 | 70.5 |
| Msa0320670 | AT1G07430.1 | 31.481 | 162 | 73 | 6 | 262 | 419 | 227 | 354 | 2.15e-12 | 69.3 |
| Msa0320670 | AT4G28400.3 | 25.795 | 283 | 126 | 11 | 168 | 445 | 47 | 250 | 4.61e-12 | 66.6 |
| Msa0320670 | AT4G28400.1 | 25.795 | 283 | 126 | 11 | 168 | 445 | 69 | 272 | 5.76e-12 | 66.6 |
| Msa0320670 | AT1G07160.1 | 29.375 | 160 | 80 | 4 | 265 | 422 | 211 | 339 | 7.52e-12 | 67.4 |
| Msa0320670 | AT3G16800.4 | 32.418 | 182 | 89 | 7 | 268 | 440 | 75 | 231 | 8.39e-12 | 65.9 |
| Msa0320670 | AT3G16800.6 | 32.418 | 182 | 89 | 7 | 268 | 440 | 75 | 231 | 8.39e-12 | 65.9 |
| Msa0320670 | AT3G05640.2 | 30.612 | 196 | 101 | 6 | 254 | 440 | 158 | 327 | 1.30e-11 | 66.6 |
| Msa0320670 | AT3G05640.1 | 30.612 | 196 | 101 | 6 | 254 | 440 | 158 | 327 | 1.30e-11 | 66.6 |
| Msa0320670 | AT3G05640.3 | 30.612 | 196 | 101 | 6 | 254 | 440 | 158 | 327 | 1.30e-11 | 66.6 |
| Msa0320670 | AT5G27930.1 | 29.577 | 213 | 112 | 7 | 254 | 454 | 161 | 347 | 1.46e-11 | 66.6 |
| Msa0320670 | AT5G27930.2 | 29.577 | 213 | 112 | 7 | 254 | 454 | 161 | 347 | 1.46e-11 | 66.6 |
| Msa0320670 | AT3G16800.2 | 32.418 | 182 | 89 | 7 | 268 | 440 | 170 | 326 | 1.81e-11 | 65.9 |
| Msa0320670 | AT3G16800.1 | 32.418 | 182 | 89 | 7 | 268 | 440 | 170 | 326 | 1.81e-11 | 65.9 |
| Msa0320670 | AT3G16800.3 | 32.418 | 182 | 89 | 7 | 268 | 440 | 170 | 326 | 1.81e-11 | 65.9 |
| Msa0320670 | AT2G30020.1 | 23.867 | 331 | 160 | 12 | 149 | 476 | 151 | 392 | 2.22e-11 | 65.9 |
| Msa0320670 | AT4G03415.1 | 28.351 | 194 | 105 | 6 | 237 | 419 | 162 | 332 | 3.33e-11 | 65.9 |
| Msa0320670 | AT4G03415.3 | 28.351 | 194 | 105 | 6 | 237 | 419 | 162 | 332 | 3.33e-11 | 65.9 |
| Msa0320670 | AT4G03415.2 | 28.351 | 194 | 105 | 6 | 237 | 419 | 162 | 332 | 3.33e-11 | 65.9 |
| Msa0320670 | AT1G78200.1 | 27.155 | 232 | 110 | 9 | 233 | 442 | 75 | 269 | 3.78e-11 | 64.3 |
| Msa0320670 | AT1G78200.3 | 27.155 | 232 | 110 | 9 | 233 | 442 | 75 | 269 | 3.78e-11 | 64.3 |
| Msa0320670 | AT1G78200.2 | 27.155 | 232 | 110 | 9 | 233 | 442 | 75 | 269 | 3.78e-11 | 64.3 |
| Msa0320670 | AT5G36250.1 | 24.453 | 274 | 162 | 10 | 165 | 419 | 97 | 344 | 5.09e-11 | 65.1 |
| Msa0320670 | AT1G78200.5 | 27.155 | 232 | 110 | 9 | 233 | 442 | 30 | 224 | 7.32e-11 | 62.8 |
| Msa0320670 | AT1G78200.4 | 27.155 | 232 | 110 | 9 | 233 | 442 | 30 | 224 | 7.32e-11 | 62.8 |
Find 120 sgRNAs with CRISPR-Local
Find 272 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| CTGCTTGTTCTTCGCATTTC+AGG | 0.110507 | 2_4:+21340023 | None:intergenic |
| GCAATTTATGACGGCTTTAA+TGG | 0.185467 | 2_4:-21339621 | Msa0320670:CDS |
| GAGAGATGCAGCGGACTTTC+TGG | 0.189847 | 2_4:-21339598 | Msa0320670:CDS |
| TCAGAAGTGTTGATAGAATT+TGG | 0.202448 | 2_4:+21339516 | None:intergenic |
| AGCAAAATCTTTGAATATAA+AGG | 0.274152 | 2_4:+21337743 | None:intergenic |
| ATTCCACAAATCTATTATTA+TGG | 0.276679 | 2_4:+21337688 | None:intergenic |
| AATTCTGAATGAAGCATTAA+TGG | 0.277608 | 2_4:-21338356 | Msa0320670:CDS |
| TGGAGTTGGCTACTTGAAAA+AGG | 0.282658 | 2_4:-21339067 | Msa0320670:intron |
| ATTCATTCATTGCCTTCTTC+AGG | 0.286079 | 2_4:-21342274 | Msa0320670:five_prime_UTR |
| AGCAGTTTCTCTTGCTTGTC+TGG | 0.293129 | 2_4:-21340005 | Msa0320670:CDS |
| GCAGTTTGTTCTGAAGAAAA+TGG | 0.295580 | 2_4:-21339657 | Msa0320670:CDS |
| CGTCCGGATTTAGTCTCTAT+TGG | 0.295698 | 2_4:-21339342 | Msa0320670:CDS |
| TTGCCTTCTTCAGGATCTAT+TGG | 0.320135 | 2_4:-21342265 | Msa0320670:intron |
| GATCCTAAGACCATTGTATC+AGG | 0.324630 | 2_4:-21339126 | Msa0320670:CDS |
| CTCCCTGATACAATGGTCTT+AGG | 0.329527 | 2_4:+21339123 | None:intergenic |
| TTGAAGGTTACGCGCGCATT+TGG | 0.331072 | 2_4:-21339087 | Msa0320670:CDS |
| AAGATACAATAGAGTCATAA+AGG | 0.346773 | 2_4:+21339568 | None:intergenic |
| CAATTTATGACGGCTTTAAT+GGG | 0.357375 | 2_4:-21339620 | Msa0320670:CDS |
| GGTACCCGTCGAAATGAATT+AGG | 0.357798 | 2_4:+21339894 | None:intergenic |
| GAATTAGGAGAGTCCAAGTT+TGG | 0.359259 | 2_4:+21339909 | None:intergenic |
| GGTGAACTGAAAATAAGTTT+TGG | 0.368688 | 2_4:-21340107 | Msa0320670:CDS |
| AAGTGTAGCATTTGCACTTA+AGG | 0.377082 | 2_4:+21339977 | None:intergenic |
| GCAAAATCTTTGAATATAAA+GGG | 0.379983 | 2_4:+21337744 | None:intergenic |
| AAGTATAGAAGAAGGTGAAA+AGG | 0.392760 | 2_4:+21342337 | None:intergenic |
| AGAAGAAATCCTTCCAAACT+TGG | 0.404367 | 2_4:-21339922 | Msa0320670:CDS |
| AGTATAGAAGAAGGTGAAAA+GGG | 0.405734 | 2_4:+21342338 | None:intergenic |
| CTTATCTAAATACAATAGAT+TGG | 0.410513 | 2_4:-21339548 | Msa0320670:CDS |
| TGCTTGTTCTTCGCATTTCA+GGG | 0.410836 | 2_4:+21340024 | None:intergenic |
| TTGCCATAATAATAGATTTG+TGG | 0.415471 | 2_4:-21337691 | None:intergenic |
| CCTCAAACATGTTCTTAGTC+AGG | 0.420514 | 2_4:-21339409 | Msa0320670:CDS |
| ATTCTGAATGAAGCATTAAT+GGG | 0.424822 | 2_4:-21338355 | Msa0320670:CDS |
| TCATCCTTGGTATGAATAAA+CGG | 0.426486 | 2_4:-21337928 | Msa0320670:CDS |
| CAGCCATTGGCAACCTTGCA+AGG | 0.431350 | 2_4:+21340056 | None:intergenic |
| AGCATATTACTTGGACTTGA+CGG | 0.438347 | 2_4:+21339795 | None:intergenic |
| GGAGGAGTTGATGAATATTC+CGG | 0.439759 | 2_4:-21337996 | Msa0320670:CDS |
| TTATTATGGCAAGAAATTAA+CGG | 0.441537 | 2_4:+21337702 | None:intergenic |
| TTATCTAAATACAATAGATT+GGG | 0.444831 | 2_4:-21339547 | Msa0320670:CDS |
| TTGAGAGAATAAGTGCTTCA+AGG | 0.445669 | 2_4:+21342375 | None:intergenic |
| GACTTGACGGGCTACAACTT+AGG | 0.448509 | 2_4:+21339808 | None:intergenic |
| AACATCTGCAATGGTGTGAT+AGG | 0.459439 | 2_4:-21339945 | Msa0320670:CDS |
| GTACATGGTTGAGCAGGAAA+TGG | 0.469822 | 2_4:-21339370 | Msa0320670:CDS |
| GATTTATGTACACTCAATCT+AGG | 0.470335 | 2_4:-21339285 | Msa0320670:CDS |
| AGGAGACAGTAGAGCAGTGC+TGG | 0.475449 | 2_4:-21339265 | Msa0320670:CDS |
| CCTGACTAAGAACATGTTTG+AGG | 0.475690 | 2_4:+21339409 | None:intergenic |
| TCATATTCAAGCATATTACT+TGG | 0.478424 | 2_4:+21339786 | None:intergenic |
| AGCTGGATCACCATGAGGAT+TGG | 0.478653 | 2_4:+21338162 | None:intergenic |
| GATGGCTCGGTCGAAACATA+TGG | 0.481720 | 2_4:+21338301 | None:intergenic |
| AGTGCTCCTTCTCGAAATGA+AGG | 0.483118 | 2_4:-21339741 | Msa0320670:CDS |
| CTCTCCTAATTCATTTCGAC+GGG | 0.484077 | 2_4:-21339898 | Msa0320670:CDS |
| ACAATGGTCTTAGGATCATC+GGG | 0.484856 | 2_4:+21339132 | None:intergenic |
| TTTCTTGTACATGGTTGAGC+AGG | 0.487048 | 2_4:-21339376 | Msa0320670:CDS |
| TTTCACTCTCCCTGATACAA+TGG | 0.488655 | 2_4:+21339116 | None:intergenic |
| GCATATTACTTGGACTTGAC+GGG | 0.490037 | 2_4:+21339796 | None:intergenic |
| TACAATGGTCTTAGGATCAT+CGG | 0.492271 | 2_4:+21339131 | None:intergenic |
| GAGAGTGAAAGGAAAGTTGA+AGG | 0.493032 | 2_4:-21339103 | Msa0320670:CDS |
| TTCACCGAGTCTTGGAATGT+TGG | 0.495957 | 2_4:-21339868 | Msa0320670:CDS |
| CAAGTAGCGGGAGGAGCTGC+CGG | 0.496037 | 2_4:-21339696 | Msa0320670:CDS |
| GAAGTCAAATAAACCATCAC+TGG | 0.501068 | 2_4:+21338231 | None:intergenic |
| GTACCCTCTTCACCGAGTCT+TGG | 0.502749 | 2_4:-21339876 | Msa0320670:CDS |
| GCAGGAAATGGAAGAACGTC+CGG | 0.504743 | 2_4:-21339358 | Msa0320670:CDS |
| TACTTTCTCCTCCTTCCAGC+CGG | 0.506348 | 2_4:+21337977 | None:intergenic |
| AGAAGAAGGTGAAAAGGGAG+AGG | 0.511658 | 2_4:+21342343 | None:intergenic |
| ATCAACACTTCTGACAATGA+AGG | 0.511860 | 2_4:-21339507 | Msa0320670:CDS |
| TCTTCAATGAGAAATTTAGC+TGG | 0.512014 | 2_4:+21338145 | None:intergenic |
| GTTACGCGCGCATTTGGAGT+TGG | 0.517791 | 2_4:-21339081 | Msa0320670:CDS |
| GTTTAAGGAAGTATAGAAGA+AGG | 0.520685 | 2_4:+21342329 | None:intergenic |
| ACTGTAATGGTAATCATCCT+TGG | 0.530068 | 2_4:-21337941 | Msa0320670:CDS |
| TAGGAGAGTCCAAGTTTGGA+AGG | 0.530512 | 2_4:+21339913 | None:intergenic |
| AGATACAATAGAGTCATAAA+GGG | 0.531936 | 2_4:+21339569 | None:intergenic |
| AATAGAGTCATAAAGGGTAC+AGG | 0.536634 | 2_4:+21339575 | None:intergenic |
| TTTGTTATAGTTGCCAGTGA+TGG | 0.537234 | 2_4:-21338244 | Msa0320670:CDS |
| ATTGTATCAGGGAGAGTGAA+AGG | 0.541597 | 2_4:-21339114 | Msa0320670:CDS |
| CTTAGGATCATCGGGATGAT+CGG | 0.542069 | 2_4:+21339140 | None:intergenic |
| TTTGTTCTGAAGAAAATGGT+TGG | 0.543497 | 2_4:-21339653 | Msa0320670:CDS |
| ATTGCAACAAAGATTGAAGA+AGG | 0.544160 | 2_4:+21342295 | None:intergenic |
| ACGCAACGAGCGGGAATGAG+AGG | 0.547388 | 2_4:-21339230 | Msa0320670:CDS |
| GATCCAATAGAGACTAAATC+CGG | 0.552186 | 2_4:+21339339 | None:intergenic |
| CTCATGAATCTTAACGAACA+AGG | 0.555280 | 2_4:+21339762 | None:intergenic |
| AAGGTGAAAAGGGAGAGGAA+TGG | 0.555811 | 2_4:+21342348 | None:intergenic |
| TATGAATAAACGGACTTCAA+AGG | 0.556184 | 2_4:-21337918 | Msa0320670:CDS |
| ATCCCTTGCAAGGTTGCCAA+TGG | 0.563603 | 2_4:-21340059 | Msa0320670:CDS |
| TAGATAGTTATGATATTCAA+AGG | 0.564892 | 2_4:-21337805 | Msa0320670:three_prime_UTR |
| TGAGAATGATTTCTTGTACA+TGG | 0.569516 | 2_4:-21339385 | Msa0320670:CDS |
| ACTCTCCTAATTCATTTCGA+CGG | 0.571835 | 2_4:-21339899 | Msa0320670:CDS |
| TCATGATGATGTCACTGTAA+TGG | 0.574582 | 2_4:-21337954 | Msa0320670:CDS |
| ATGCACGTTCAGTGATGGCT+CGG | 0.575022 | 2_4:+21338288 | None:intergenic |
| CATTCCAAGACTCGGTGAAG+AGG | 0.577652 | 2_4:+21339872 | None:intergenic |
| ATAAACATGCTTAGTCCTGA+AGG | 0.578836 | 2_4:-21340128 | Msa0320670:exon |
| TGCTTGCACTCTATCTTCAC+CGG | 0.580949 | 2_4:+21339677 | None:intergenic |
| TTACCAATAGATCCTGAAGA+AGG | 0.581857 | 2_4:+21342262 | None:intergenic |
| CGACAGAGGCATCCCTTGCA+AGG | 0.582173 | 2_4:-21340069 | Msa0320670:CDS |
| AACCCGAAAAGCGAGTTGGT+TGG | 0.582584 | 2_4:+21342399 | None:intergenic |
| TGATGAATATTCCGGCTGGA+AGG | 0.590258 | 2_4:-21337988 | Msa0320670:CDS |
| ATTCCAAGACTCGGTGAAGA+GGG | 0.590906 | 2_4:+21339873 | None:intergenic |
| ACCATTGCAGATGTTTGTGT+TGG | 0.594327 | 2_4:+21339953 | None:intergenic |
| AGAAAACCTTCATTTCGAGA+AGG | 0.595202 | 2_4:+21339735 | None:intergenic |
| TGAATATTCCGGCTGGAAGG+AGG | 0.595694 | 2_4:-21337985 | Msa0320670:CDS |
| AGGAAACCCGAAAAGCGAGT+TGG | 0.596088 | 2_4:+21342395 | None:intergenic |
| AGCCATTGGCAACCTTGCAA+GGG | 0.598615 | 2_4:+21340057 | None:intergenic |
| GAGTTGATGAATATTCCGGC+TGG | 0.599183 | 2_4:-21337992 | Msa0320670:CDS |
| GCCAACACAAACATCTGCAA+TGG | 0.600084 | 2_4:-21339954 | Msa0320670:CDS |
| CGAGGAAGCAGTGAATCTTG+TGG | 0.603758 | 2_4:-21338200 | Msa0320670:CDS |
| CATGCAGTAACGCAACGAGC+GGG | 0.603782 | 2_4:-21339239 | Msa0320670:CDS |
| GCTACGGAAGTACAAGTAGC+GGG | 0.612148 | 2_4:-21339708 | Msa0320670:CDS |
| ATCCTAAGACCATTGTATCA+GGG | 0.620067 | 2_4:-21339125 | Msa0320670:CDS |
| AAGTCCGTTTATTCATACCA+AGG | 0.623949 | 2_4:+21337924 | None:intergenic |
| TATATCTTGACCAATCCTCA+TGG | 0.626681 | 2_4:-21338172 | Msa0320670:CDS |
| TGCTACGGAAGTACAAGTAG+CGG | 0.637990 | 2_4:-21339709 | Msa0320670:CDS |
| TATCAATGCAATAGCGACAG+AGG | 0.638312 | 2_4:-21340083 | Msa0320670:CDS |
| TCTTAAGATCACGTACTCGA+AGG | 0.641519 | 2_4:+21338329 | None:intergenic |
| ATGTCCAACATTCCAAGACT+CGG | 0.645091 | 2_4:+21339864 | None:intergenic |
| ACATGCAGTAACGCAACGAG+CGG | 0.671029 | 2_4:-21339240 | Msa0320670:CDS |
| TCATGAATCTTAACGAACAA+GGG | 0.675012 | 2_4:+21339763 | None:intergenic |
| CTTTAATGGGAGAGATGCAG+CGG | 0.676826 | 2_4:-21339607 | Msa0320670:CDS |
| ATGTGAAAATGATTTACTCG+AGG | 0.681762 | 2_4:+21339446 | None:intergenic |
| TAGAAAACACTACTTGACCA+AGG | 0.683119 | 2_4:+21337834 | None:intergenic |
| AATTTAGCTGGATCACCATG+AGG | 0.684242 | 2_4:+21338157 | None:intergenic |
| GGCTCGGTCGAAACATATGG+CGG | 0.702299 | 2_4:+21338304 | None:intergenic |
| ATTTGACTTCTTCAGCAACG+AGG | 0.737843 | 2_4:-21338218 | Msa0320670:CDS |
| ACGGAAGTACAAGTAGCGGG+AGG | 0.744564 | 2_4:-21339705 | Msa0320670:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !!! | TTTTTTGTTTTTTTTTTTGT+TGG | - | chr2_4:21339099-21339118 | Msa0320670:CDS | 10.0% |
| !! | AAAATTATTTATAAACTCAT+TGG | + | chr2_4:21341082-21341101 | None:intergenic | 10.0% |
| !!! | AATGAGTTTATAAATAATTT+TGG | - | chr2_4:21341081-21341100 | Msa0320670:intron | 10.0% |
| !! | TATTGATATATAATATAACA+TGG | + | chr2_4:21341521-21341540 | None:intergenic | 10.0% |
| !!! | GATATTTTTGTTTTTATTAT+CGG | - | chr2_4:21342043-21342062 | Msa0320670:intron | 10.0% |
| !!! | CTATATAATAATTTTGCTAT+TGG | - | chr2_4:21338049-21338068 | Msa0320670:intron | 15.0% |
| !! | AAAAAAACAATTGTTTAGAT+GGG | - | chr2_4:21338106-21338125 | Msa0320670:intron | 15.0% |
| !!! | AAATAAGGAAGAATAAATTT+TGG | - | chr2_4:21339321-21339340 | Msa0320670:CDS | 15.0% |
| !!! | GAGTTTTTTATATGATTAAA+TGG | - | chr2_4:21339838-21339857 | Msa0320670:CDS | 15.0% |
| !!! | ATACATTGATTAAAAAATTG+AGG | - | chr2_4:21339892-21339911 | Msa0320670:CDS | 15.0% |
| !! | TTATCTAAATACAATAGATT+GGG | - | chr2_4:21340553-21340572 | Msa0320670:intron | 15.0% |
| !! | AAATGCATAATATTAGTAAA+AGG | + | chr2_4:21341401-21341420 | None:intergenic | 15.0% |
| !! | ATATAATATAACATGGATAT+GGG | + | chr2_4:21341514-21341533 | None:intergenic | 15.0% |
| !! | TATATAATATAACATGGATA+TGG | + | chr2_4:21341515-21341534 | None:intergenic | 15.0% |
| !! | GAAAAAAACAATTGTTTAGA+TGG | - | chr2_4:21338105-21338124 | Msa0320670:intron | 20.0% |
| !!! | ATATTTGTTCTTGTTTTTTG+AGG | - | chr2_4:21338278-21338297 | Msa0320670:CDS | 20.0% |
| !! | ACAAAAACTATACAATGAAT+AGG | + | chr2_4:21339354-21339373 | None:intergenic | 20.0% |
| !! | TATTTCAATTCAAACATTGT+AGG | + | chr2_4:21339462-21339481 | None:intergenic | 20.0% |
| !! | CAATTAATTAATGCAATCAA+TGG | + | chr2_4:21339530-21339549 | None:intergenic | 20.0% |
| !!! | TTTTAGTGAGTATAAGTATT+AGG | + | chr2_4:21339593-21339612 | None:intergenic | 20.0% |
| !! | CTTATCTAAATACAATAGAT+TGG | - | chr2_4:21340552-21340571 | Msa0320670:intron | 20.0% |
| !! | AAAAAAATTAGGATACTTCT+TGG | + | chr2_4:21341177-21341196 | None:intergenic | 20.0% |
| !! | TATAATATAACATGGATATG+GGG | + | chr2_4:21341513-21341532 | None:intergenic | 20.0% |
| !! | TCTATTTATAAATTCAGCAT+GGG | + | chr2_4:21342025-21342044 | None:intergenic | 20.0% |
| !! | ATCTATTTATAAATTCAGCA+TGG | + | chr2_4:21342026-21342045 | None:intergenic | 20.0% |
| !! | TAGATAGTTATGATATTCAA+AGG | - | chr2_4:21342295-21342314 | Msa0320670:five_prime_UTR | 20.0% |
| !! | GCAAAATCTTTGAATATAAA+GGG | + | chr2_4:21342359-21342378 | None:intergenic | 20.0% |
| !! | AGCAAAATCTTTGAATATAA+AGG | + | chr2_4:21342360-21342379 | None:intergenic | 20.0% |
| !! | TTATTATGGCAAGAAATTAA+CGG | + | chr2_4:21342401-21342420 | None:intergenic | 20.0% |
| ! | ATATTTGTCTTTGTTCTTTG+TGG | - | chr2_4:21337980-21337999 | Msa0320670:CDS | 25.0% |
| ! | TATTTGTCTTTGTTCTTTGT+GGG | - | chr2_4:21337981-21338000 | Msa0320670:CDS | 25.0% |
| !! | TGATCAATTGAGTATGTTTT+TGG | - | chr2_4:21338939-21338958 | Msa0320670:intron | 25.0% |
| !!! | AATTGAGTATGTTTTTGGAA+CGG | - | chr2_4:21338944-21338963 | Msa0320670:intron | 25.0% |
| ! | ATCAAAAATCGAAATCAAAC+AGG | - | chr2_4:21339061-21339080 | Msa0320670:intron | 25.0% |
| ! | TGAAGTTAGATTATCTTTCT+TGG | - | chr2_4:21339178-21339197 | Msa0320670:CDS | 25.0% |
| !! | AGTTTTTGTTGAACCATTAT+TGG | - | chr2_4:21339365-21339384 | Msa0320670:CDS | 25.0% |
| !! | AATGGAATCAAATTCTCTTT+TGG | + | chr2_4:21339394-21339413 | None:intergenic | 25.0% |
| ! | CTAAAAGATATGAATAGAGA+GGG | + | chr2_4:21339563-21339582 | None:intergenic | 25.0% |
| ! | ACTAAAAGATATGAATAGAG+AGG | + | chr2_4:21339564-21339583 | None:intergenic | 25.0% |
| !!! | TTTTTTGAAGGAATCATTGT+TGG | - | chr2_4:21339760-21339779 | Msa0320670:CDS | 25.0% |
| !!! | TGATTTTCTAGATTTTGGAA+GGG | + | chr2_4:21339811-21339830 | None:intergenic | 25.0% |
| !! | TTGATTTTCTAGATTTTGGA+AGG | + | chr2_4:21339812-21339831 | None:intergenic | 25.0% |
| !!! | CTGATTGATTTTCTAGATTT+TGG | + | chr2_4:21339816-21339835 | None:intergenic | 25.0% |
| !!! | TGAGAATGATTTTTTAAACC+AGG | - | chr2_4:21339947-21339966 | Msa0320670:CDS | 25.0% |
| ! | TCATATTCAAGCATATTACT+TGG | + | chr2_4:21340317-21340336 | None:intergenic | 25.0% |
| !!! | CTTTTTTGTGCAATTTATGA+CGG | - | chr2_4:21340470-21340489 | Msa0320670:intron | 25.0% |
| ! | AGATACAATAGAGTCATAAA+GGG | + | chr2_4:21340534-21340553 | None:intergenic | 25.0% |
| ! | AAGATACAATAGAGTCATAA+AGG | + | chr2_4:21340535-21340554 | None:intergenic | 25.0% |
| ! | TACTTCTTGGATACATATAT+AGG | + | chr2_4:21341164-21341183 | None:intergenic | 25.0% |
| ! | CACAACATTATATAAGAACA+AGG | + | chr2_4:21341279-21341298 | None:intergenic | 25.0% |
| ! | TATTATACTCTCGCAATAAT+TGG | + | chr2_4:21341680-21341699 | None:intergenic | 25.0% |
| !! | AATTCTGAATGAAGCATTAA+TGG | - | chr2_4:21341744-21341763 | Msa0320670:intron | 25.0% |
| !! | ATTCTGAATGAAGCATTAAT+GGG | - | chr2_4:21341745-21341764 | Msa0320670:intron | 25.0% |
| !! | TTTCACATGCAAATTTTCTT+TGG | + | chr2_4:21342232-21342251 | None:intergenic | 25.0% |
| !! | AGATTTTGCTTTACAGATTT+TGG | - | chr2_4:21342370-21342389 | Msa0320670:five_prime_UTR | 25.0% |
| AGTATAGAAGAAGGTGAAAA+GGG | + | chr2_4:21337765-21337784 | None:intergenic | 30.0% | |
| AAGTATAGAAGAAGGTGAAA+AGG | + | chr2_4:21337766-21337785 | None:intergenic | 30.0% | |
| ! | GTTTAAGGAAGTATAGAAGA+AGG | + | chr2_4:21337774-21337793 | None:intergenic | 30.0% |
| AAGGTAAAAATGCAGGTTTA+AGG | + | chr2_4:21337789-21337808 | None:intergenic | 30.0% | |
| ATTGAAGAAGGTAAAAATGC+AGG | + | chr2_4:21337796-21337815 | None:intergenic | 30.0% | |
| ATTGCAACAAAGATTGAAGA+AGG | + | chr2_4:21337808-21337827 | None:intergenic | 30.0% | |
| CAATCTTGAACTTCTACTTA+AGG | + | chr2_4:21338220-21338239 | None:intergenic | 30.0% | |
| CTTAAGTAGAAGTTCAAGAT+TGG | - | chr2_4:21338218-21338237 | Msa0320670:CDS | 30.0% | |
| !!! | TTTTTGAGGTTCTAATTACG+TGG | - | chr2_4:21338292-21338311 | Msa0320670:CDS | 30.0% |
| TTTGTTGAATTGACACTGAT+TGG | - | chr2_4:21338361-21338380 | Msa0320670:CDS | 30.0% | |
| !! | TTCGAACAATTTTCAAGCAT+TGG | - | chr2_4:21338458-21338477 | Msa0320670:intron | 30.0% |
| ! | TCATTGCGTCAACATTTTAT+TGG | - | chr2_4:21338612-21338631 | Msa0320670:intron | 30.0% |
| TGTGCTTCATAGATAATTAC+AGG | - | chr2_4:21338643-21338662 | Msa0320670:intron | 30.0% | |
| TTCATAGATAATTACAGGCT+GGG | - | chr2_4:21338648-21338667 | Msa0320670:intron | 30.0% | |
| TTGATGTAAAATCACACCAA+AGG | + | chr2_4:21338690-21338709 | None:intergenic | 30.0% | |
| !! | AGCTACAATTTCTAGAGTTT+AGG | + | chr2_4:21338997-21339016 | None:intergenic | 30.0% |
| AGGTCTTTAGACATGAAAAA+GGG | + | chr2_4:21339021-21339040 | None:intergenic | 30.0% | |
| AAGGTCTTTAGACATGAAAA+AGG | + | chr2_4:21339022-21339041 | None:intergenic | 30.0% | |
| AAGACCTTCTAAATATGAGT+TGG | - | chr2_4:21339034-21339053 | Msa0320670:intron | 30.0% | |
| TATGCCAACTCATATTTAGA+AGG | + | chr2_4:21339041-21339060 | None:intergenic | 30.0% | |
| AATTTACAACTAGAGATGCT+TGG | - | chr2_4:21339135-21339154 | Msa0320670:CDS | 30.0% | |
| ! | TTCCTTATTTATGTGAGAAG+GGG | + | chr2_4:21339311-21339330 | None:intergenic | 30.0% |
| ! | CTTCCTTATTTATGTGAGAA+GGG | + | chr2_4:21339312-21339331 | None:intergenic | 30.0% |
| ! | TCTTCCTTATTTATGTGAGA+AGG | + | chr2_4:21339313-21339332 | None:intergenic | 30.0% |
| !! | TCTCTTTTGGAAACCAATAA+TGG | + | chr2_4:21339381-21339400 | None:intergenic | 30.0% |
| CTGTCAAAATCTGCAAATAA+TGG | + | chr2_4:21339412-21339431 | None:intergenic | 30.0% | |
| !! | ATTTTGACAGAGATAATCTG+AGG | - | chr2_4:21339422-21339441 | Msa0320670:CDS | 30.0% |
| !! | CTCAAAAGTATCAATATCAC+TGG | + | chr2_4:21339931-21339950 | None:intergenic | 30.0% |
| ! | GGTGAACTGAAAATAAGTTT+TGG | - | chr2_4:21339993-21340012 | Msa0320670:CDS | 30.0% |
| TCATGAATCTTAACGAACAA+GGG | + | chr2_4:21340340-21340359 | None:intergenic | 30.0% | |
| !! | TTTGTTCTGAAGAAAATGGT+TGG | - | chr2_4:21340447-21340466 | Msa0320670:intron | 30.0% |
| ! | CAATTTATGACGGCTTTAAT+GGG | - | chr2_4:21340480-21340499 | Msa0320670:intron | 30.0% |
| !! | TCAGAAGTGTTGATAGAATT+TGG | + | chr2_4:21340587-21340606 | None:intergenic | 30.0% |
| ATGTGAAAATGATTTACTCG+AGG | + | chr2_4:21340657-21340676 | None:intergenic | 30.0% | |
| ! | GAGTAAATCATTTTCACATG+TGG | - | chr2_4:21340658-21340677 | Msa0320670:intron | 30.0% |
| TGAGAATGATTTCTTGTACA+TGG | - | chr2_4:21340715-21340734 | Msa0320670:intron | 30.0% | |
| ! | TTTTACTTGTGCTTCTTCAT+GGG | - | chr2_4:21340789-21340808 | Msa0320670:intron | 30.0% |
| GATTTATGTACACTCAATCT+AGG | - | chr2_4:21340815-21340834 | Msa0320670:intron | 30.0% | |
| TATAATGTTGTGAGCACAAT+TGG | - | chr2_4:21341287-21341306 | Msa0320670:intron | 30.0% | |
| TAAAACCAAAAGATTCGATG+TGG | + | chr2_4:21341476-21341495 | None:intergenic | 30.0% | |
| ACCAATATTCAAGCTACTAA+TGG | - | chr2_4:21341595-21341614 | Msa0320670:intron | 30.0% | |
| ACCATTAGTAGCTTGAATAT+TGG | + | chr2_4:21341599-21341618 | None:intergenic | 30.0% | |
| TCTTCAATGAGAAATTTAGC+TGG | + | chr2_4:21341958-21341977 | None:intergenic | 30.0% | |
| TCATCCTTGGTATGAATAAA+CGG | - | chr2_4:21342172-21342191 | Msa0320670:intron | 30.0% | |
| ! | TATGAATAAACGGACTTCAA+AGG | - | chr2_4:21342182-21342201 | Msa0320670:intron | 30.0% |
| ! | TTGCATGTGAAACTTTTGAA+TGG | - | chr2_4:21342240-21342259 | Msa0320670:intron | 30.0% |
| ! | AAACTTTTGAATGGATACCT+TGG | - | chr2_4:21342249-21342268 | Msa0320670:intron | 30.0% |
| TTGAGAGAATAAGTGCTTCA+AGG | + | chr2_4:21337728-21337747 | None:intergenic | 35.0% | |
| ATTCATTCATTGCCTTCTTC+AGG | - | chr2_4:21337826-21337845 | Msa0320670:three_prime_UTR | 35.0% | |
| TTACCAATAGATCCTGAAGA+AGG | + | chr2_4:21337841-21337860 | None:intergenic | 35.0% | |
| TTCAGGATCTATTGGTAAGT+GGG | - | chr2_4:21337843-21337862 | Msa0320670:three_prime_UTR | 35.0% | |
| ! | TGATGACGAGTAATACTATG+AGG | - | chr2_4:21338398-21338417 | Msa0320670:intron | 35.0% |
| CTTCATAGATAATTACAGGC+TGG | - | chr2_4:21338647-21338666 | Msa0320670:intron | 35.0% | |
| ! | AAACCATTGATTAACGCAAG+AGG | + | chr2_4:21338740-21338759 | None:intergenic | 35.0% |
| GTGCACTAAAATCAATTTCC+TGG | + | chr2_4:21338843-21338862 | None:intergenic | 35.0% | |
| ATTCTCTTACCATTGACAGA+AGG | - | chr2_4:21338896-21338915 | Msa0320670:intron | 35.0% | |
| !! | AGGAGCTTTTTGTTTGCTTA+TGG | - | chr2_4:21338916-21338935 | Msa0320670:intron | 35.0% |
| GGTCTTTAGACATGAAAAAG+GGG | + | chr2_4:21339020-21339039 | None:intergenic | 35.0% | |
| GTGTGTATTCAATTGTTTGC+AGG | + | chr2_4:21339616-21339635 | None:intergenic | 35.0% | |
| TTCTTTATCCGTTGATCTGA+TGG | - | chr2_4:21339703-21339722 | Msa0320670:CDS | 35.0% | |
| !!! | CAGGCTGCAAATTTTTTTGA+AGG | - | chr2_4:21339748-21339767 | Msa0320670:CDS | 35.0% |
| ATAAACATGCTTAGTCCTGA+AGG | - | chr2_4:21339972-21339991 | Msa0320670:CDS | 35.0% | |
| !! | CTTATTTTCAGTTCACCTTC+AGG | + | chr2_4:21339990-21340009 | None:intergenic | 35.0% |
| AAGTGTAGCATTTGCACTTA+AGG | + | chr2_4:21340126-21340145 | None:intergenic | 35.0% | |
| AGAAGAAATCCTTCCAAACT+TGG | - | chr2_4:21340178-21340197 | Msa0320670:intron | 35.0% | |
| ACTCTCCTAATTCATTTCGA+CGG | - | chr2_4:21340201-21340220 | Msa0320670:intron | 35.0% | |
| AGCATATTACTTGGACTTGA+CGG | + | chr2_4:21340308-21340327 | None:intergenic | 35.0% | |
| CTCATGAATCTTAACGAACA+AGG | + | chr2_4:21340341-21340360 | None:intergenic | 35.0% | |
| AGAAAACCTTCATTTCGAGA+AGG | + | chr2_4:21340368-21340387 | None:intergenic | 35.0% | |
| ! | TGAAGGTTTTCTTAGTGCTA+CGG | - | chr2_4:21340376-21340395 | Msa0320670:intron | 35.0% |
| !! | GCAGTTTGTTCTGAAGAAAA+TGG | - | chr2_4:21340443-21340462 | Msa0320670:intron | 35.0% |
| ! | GCAATTTATGACGGCTTTAA+TGG | - | chr2_4:21340479-21340498 | Msa0320670:intron | 35.0% |
| ! | AATAGAGTCATAAAGGGTAC+AGG | + | chr2_4:21340528-21340547 | None:intergenic | 35.0% |
| ATCAACACTTCTGACAATGA+AGG | - | chr2_4:21340593-21340612 | Msa0320670:intron | 35.0% | |
| GATCCAATAGAGACTAAATC+CGG | + | chr2_4:21340764-21340783 | None:intergenic | 35.0% | |
| ! | GTTTTACTTGTGCTTCTTCA+TGG | - | chr2_4:21340788-21340807 | Msa0320670:intron | 35.0% |
| ! | TACAATGGTCTTAGGATCAT+CGG | + | chr2_4:21340972-21340991 | None:intergenic | 35.0% |
| ATCCTAAGACCATTGTATCA+GGG | - | chr2_4:21340975-21340994 | Msa0320670:intron | 35.0% | |
| !!! | AAGGTTTTGAGCGATACATT+TGG | - | chr2_4:21341210-21341229 | Msa0320670:intron | 35.0% |
| !!! | AGGTTTTGAGCGATACATTT+GGG | - | chr2_4:21341211-21341230 | Msa0320670:intron | 35.0% |
| !! | TATATCCCAAAGTATCGAAG+AGG | + | chr2_4:21341240-21341259 | None:intergenic | 35.0% |
| ACTGACTACATATGCAAATG+AGG | + | chr2_4:21341360-21341379 | None:intergenic | 35.0% | |
| TTCAAGCTACTAATGGTGAT+TGG | - | chr2_4:21341602-21341621 | Msa0320670:intron | 35.0% | |
| ! | ATTTTATGCACGTTCAGTGA+TGG | + | chr2_4:21341820-21341839 | None:intergenic | 35.0% |
| ! | TTTGTTATAGTTGCCAGTGA+TGG | - | chr2_4:21341856-21341875 | Msa0320670:intron | 35.0% |
| GAAGTCAAATAAACCATCAC+TGG | + | chr2_4:21341872-21341891 | None:intergenic | 35.0% | |
| TATATCTTGACCAATCCTCA+TGG | - | chr2_4:21341928-21341947 | Msa0320670:intron | 35.0% | |
| !! | TTCTCTTACAGGTTTTAGCA+CGG | - | chr2_4:21342083-21342102 | Msa0320670:intron | 35.0% |
| ! | TCATGATGATGTCACTGTAA+TGG | - | chr2_4:21342146-21342165 | Msa0320670:intron | 35.0% |
| ACTGTAATGGTAATCATCCT+TGG | - | chr2_4:21342159-21342178 | Msa0320670:intron | 35.0% | |
| AAGTCCGTTTATTCATACCA+AGG | + | chr2_4:21342179-21342198 | None:intergenic | 35.0% | |
| TAGAAAACACTACTTGACCA+AGG | + | chr2_4:21342269-21342288 | None:intergenic | 35.0% | |
| !! | TTTCCAACCAACTCGCTTTT+CGG | - | chr2_4:21337698-21337717 | Msa0320670:three_prime_UTR | 40.0% |
| TTGCCTTCTTCAGGATCTAT+TGG | - | chr2_4:21337835-21337854 | Msa0320670:three_prime_UTR | 40.0% | |
| CTTCAGGATCTATTGGTAAG+TGG | - | chr2_4:21337842-21337861 | Msa0320670:three_prime_UTR | 40.0% | |
| CTAATTACGTGGTGTGACAA+TGG | - | chr2_4:21338303-21338322 | Msa0320670:CDS | 40.0% | |
| ! | ACTATGAGGTTTTACCGACA+AGG | - | chr2_4:21338412-21338431 | Msa0320670:intron | 40.0% |
| TTTACCGACAAGGATTGACA+TGG | - | chr2_4:21338422-21338441 | Msa0320670:intron | 40.0% | |
| ACAACCATGTCAATCCTTGT+CGG | + | chr2_4:21338429-21338448 | None:intergenic | 40.0% | |
| ACTAACACATGACGAACATC+AGG | + | chr2_4:21338551-21338570 | None:intergenic | 40.0% | |
| ACCTACTATAGATGCACCTT+TGG | - | chr2_4:21338671-21338690 | Msa0320670:intron | 40.0% | |
| ! | ACCAAAGGTGCATCTATAGT+AGG | + | chr2_4:21338675-21338694 | None:intergenic | 40.0% |
| TAGCCTCTTGCGTTAATCAA+TGG | - | chr2_4:21338734-21338753 | Msa0320670:intron | 40.0% | |
| TAAGAGAGAGAGAGAGAGAT+TGG | - | chr2_4:21338806-21338825 | Msa0320670:intron | 40.0% | |
| CAAAAAGCTCCTTCTGTCAA+TGG | + | chr2_4:21338908-21338927 | None:intergenic | 40.0% | |
| !!! | TGAGTATGTTTTTGGAACGG+CGG | - | chr2_4:21338947-21338966 | Msa0320670:intron | 40.0% |
| AGTTTAGGAGACGTGTGTTT+GGG | + | chr2_4:21338982-21339001 | None:intergenic | 40.0% | |
| AACAGCATAACATCACAGAG+AGG | + | chr2_4:21339204-21339223 | None:intergenic | 40.0% | |
| ATTTATGTGAGAAGGGGAGA+GGG | + | chr2_4:21339305-21339324 | None:intergenic | 40.0% | |
| TATTTATGTGAGAAGGGGAG+AGG | + | chr2_4:21339306-21339325 | None:intergenic | 40.0% | |
| CTCCCCTTCTCACATAAATA+AGG | - | chr2_4:21339306-21339325 | Msa0320670:CDS | 40.0% | |
| GACTAAGCATGTTTATCTCC+TGG | + | chr2_4:21339968-21339987 | None:intergenic | 40.0% | |
| TATCAATGCAATAGCGACAG+AGG | - | chr2_4:21340017-21340036 | Msa0320670:CDS | 40.0% | |
| TGCTTGTTCTTCGCATTTCA+GGG | + | chr2_4:21340079-21340098 | None:intergenic | 40.0% | |
| ACCATTGCAGATGTTTGTGT+TGG | + | chr2_4:21340150-21340169 | None:intergenic | 40.0% | |
| AACATCTGCAATGGTGTGAT+AGG | - | chr2_4:21340155-21340174 | Msa0320670:intron | 40.0% | |
| GAATTAGGAGAGTCCAAGTT+TGG | + | chr2_4:21340194-21340213 | None:intergenic | 40.0% | |
| CTCTCCTAATTCATTTCGAC+GGG | - | chr2_4:21340202-21340221 | Msa0320670:intron | 40.0% | |
| ATGTCCAACATTCCAAGACT+CGG | + | chr2_4:21340239-21340258 | None:intergenic | 40.0% | |
| GCATATTACTTGGACTTGAC+GGG | + | chr2_4:21340307-21340326 | None:intergenic | 40.0% | |
| CCTGACTAAGAACATGTTTG+AGG | + | chr2_4:21340694-21340713 | None:intergenic | 40.0% | |
| CCTCAAACATGTTCTTAGTC+AGG | - | chr2_4:21340691-21340710 | Msa0320670:intron | 40.0% | |
| TTTCTTGTACATGGTTGAGC+AGG | - | chr2_4:21340724-21340743 | Msa0320670:intron | 40.0% | |
| ! | ACAATGGTCTTAGGATCATC+GGG | + | chr2_4:21340971-21340990 | None:intergenic | 40.0% |
| GATCCTAAGACCATTGTATC+AGG | - | chr2_4:21340974-21340993 | Msa0320670:intron | 40.0% | |
| TTTCACTCTCCCTGATACAA+TGG | + | chr2_4:21340987-21341006 | None:intergenic | 40.0% | |
| ATTGTATCAGGGAGAGTGAA+AGG | - | chr2_4:21340986-21341005 | Msa0320670:intron | 40.0% | |
| GAGAGTGAAAGGAAAGTTGA+AGG | - | chr2_4:21340997-21341016 | Msa0320670:intron | 40.0% | |
| TGGAGTTGGCTACTTGAAAA+AGG | - | chr2_4:21341033-21341052 | Msa0320670:intron | 40.0% | |
| GTTGGCTACTTGAAAAAGGT+TGG | - | chr2_4:21341037-21341056 | Msa0320670:intron | 40.0% | |
| GGATACCTCTTCGATACTTT+GGG | - | chr2_4:21341232-21341251 | Msa0320670:intron | 40.0% | |
| ! | CTAGACCACATCGAATCTTT+TGG | - | chr2_4:21341468-21341487 | Msa0320670:intron | 40.0% |
| TAACATGGATATGGGGATGT+GGG | + | chr2_4:21341506-21341525 | None:intergenic | 40.0% | |
| ATAACATGGATATGGGGATG+TGG | + | chr2_4:21341507-21341526 | None:intergenic | 40.0% | |
| ACCATGTCAAATCAAGCGTA+TGG | - | chr2_4:21341540-21341559 | Msa0320670:intron | 40.0% | |
| CCATGTCAAATCAAGCGTAT+GGG | - | chr2_4:21341541-21341560 | Msa0320670:intron | 40.0% | |
| AATGGTGATTGGTGAGAAGA+TGG | - | chr2_4:21341613-21341632 | Msa0320670:intron | 40.0% | |
| ! | CATGCATTTTCTGAGTTTGC+TGG | - | chr2_4:21341645-21341664 | Msa0320670:intron | 40.0% |
| TCTTAAGATCACGTACTCGA+AGG | + | chr2_4:21341774-21341793 | None:intergenic | 40.0% | |
| ! | ATTTGACTTCTTCAGCAACG+AGG | - | chr2_4:21341882-21341901 | Msa0320670:intron | 40.0% |
| AATTTAGCTGGATCACCATG+AGG | + | chr2_4:21341946-21341965 | None:intergenic | 40.0% | |
| GAAAAAGCAGCTAATTCTGC+AGG | - | chr2_4:21341985-21342004 | Msa0320670:intron | 40.0% | |
| ! | AACCAGATCGATTCTCTTAC+AGG | - | chr2_4:21342072-21342091 | Msa0320670:intron | 40.0% |
| AACCTGTAAGAGAATCGATC+TGG | + | chr2_4:21342077-21342096 | None:intergenic | 40.0% | |
| !! | GGAGGAGTTGATGAATATTC+CGG | - | chr2_4:21342104-21342123 | Msa0320670:intron | 40.0% |
| !! | TTCCAACCAACTCGCTTTTC+GGG | - | chr2_4:21337699-21337718 | Msa0320670:three_prime_UTR | 45.0% |
| AAGGTGAAAAGGGAGAGGAA+TGG | + | chr2_4:21337755-21337774 | None:intergenic | 45.0% | |
| AGAAGAAGGTGAAAAGGGAG+AGG | + | chr2_4:21337760-21337779 | None:intergenic | 45.0% | |
| !! | TCATTGAGAAGTGTCCCATG+TGG | - | chr2_4:21338129-21338148 | Msa0320670:CDS | 45.0% |
| ! | CTCAAAAGCGTGGCATATAC+AGG | - | chr2_4:21338507-21338526 | Msa0320670:intron | 45.0% |
| AGATTGGAAGCAAGCAAACC+AGG | - | chr2_4:21338822-21338841 | Msa0320670:intron | 45.0% | |
| !!! | TATGTTTTTGGAACGGCGGT+GGG | - | chr2_4:21338951-21338970 | Msa0320670:intron | 45.0% |
| GAGTTTAGGAGACGTGTGTT+TGG | + | chr2_4:21338983-21339002 | None:intergenic | 45.0% | |
| GTAAGCAGCCATCAGATCAA+CGG | + | chr2_4:21339714-21339733 | None:intergenic | 45.0% | |
| TGGCTGCTTACTCATGTATG+TGG | - | chr2_4:21339723-21339742 | Msa0320670:CDS | 45.0% | |
| CTTACTCATGTATGTGGTGC+AGG | - | chr2_4:21339729-21339748 | Msa0320670:CDS | 45.0% | |
| CTGCTTGTTCTTCGCATTTC+AGG | + | chr2_4:21340080-21340099 | None:intergenic | 45.0% | |
| AGCAGTTTCTCTTGCTTGTC+TGG | - | chr2_4:21340095-21340114 | Msa0320670:CDS | 45.0% | |
| GCCAACACAAACATCTGCAA+TGG | - | chr2_4:21340146-21340165 | Msa0320670:intron | 45.0% | |
| TAGGAGAGTCCAAGTTTGGA+AGG | + | chr2_4:21340190-21340209 | None:intergenic | 45.0% | |
| GGTACCCGTCGAAATGAATT+AGG | + | chr2_4:21340209-21340228 | None:intergenic | 45.0% | |
| !! | ATTCCAAGACTCGGTGAAGA+GGG | + | chr2_4:21340230-21340249 | None:intergenic | 45.0% |
| TTCACCGAGTCTTGGAATGT+TGG | - | chr2_4:21340232-21340251 | Msa0320670:intron | 45.0% | |
| AGTGCTCCTTCTCGAAATGA+AGG | - | chr2_4:21340359-21340378 | Msa0320670:intron | 45.0% | |
| ! | TGCTACGGAAGTACAAGTAG+CGG | - | chr2_4:21340391-21340410 | Msa0320670:intron | 45.0% |
| TGCTTGCACTCTATCTTCAC+CGG | + | chr2_4:21340426-21340445 | None:intergenic | 45.0% | |
| CTTTAATGGGAGAGATGCAG+CGG | - | chr2_4:21340493-21340512 | Msa0320670:intron | 45.0% | |
| GTACATGGTTGAGCAGGAAA+TGG | - | chr2_4:21340730-21340749 | Msa0320670:intron | 45.0% | |
| CGTCCGGATTTAGTCTCTAT+TGG | - | chr2_4:21340758-21340777 | Msa0320670:intron | 45.0% | |
| CTTAGGATCATCGGGATGAT+CGG | + | chr2_4:21340963-21340982 | None:intergenic | 45.0% | |
| CTCCCTGATACAATGGTCTT+AGG | + | chr2_4:21340980-21340999 | None:intergenic | 45.0% | |
| GGGATACCTCTTCGATACTT+TGG | - | chr2_4:21341231-21341250 | Msa0320670:intron | 45.0% | |
| ! | CCCATACGCTTGATTTGACA+TGG | + | chr2_4:21341544-21341563 | None:intergenic | 45.0% |
| !! | TCTTACAGGTTTTAGCACGG+AGG | - | chr2_4:21342086-21342105 | Msa0320670:intron | 45.0% |
| !! | GAGTTGATGAATATTCCGGC+TGG | - | chr2_4:21342108-21342127 | Msa0320670:intron | 45.0% |
| TGATGAATATTCCGGCTGGA+AGG | - | chr2_4:21342112-21342131 | Msa0320670:intron | 45.0% | |
| !!! | AAAAGTTTTTTAAAAAAATT+AGG | + | chr2_4:21341188-21341207 | None:intergenic | 5.0% |
| !!! | TTTTTTAAAAAACTTTTAAA+AGG | - | chr2_4:21341191-21341210 | Msa0320670:intron | 5.0% |
| !! | AACCCGAAAAGCGAGTTGGT+TGG | + | chr2_4:21337704-21337723 | None:intergenic | 50.0% |
| AGGAAACCCGAAAAGCGAGT+TGG | + | chr2_4:21337708-21337727 | None:intergenic | 50.0% | |
| TGTCCCATGTGGAGTCTACA+AGG | - | chr2_4:21338140-21338159 | Msa0320670:CDS | 50.0% | |
| GTCCCATGTGGAGTCTACAA+GGG | - | chr2_4:21338141-21338160 | Msa0320670:CDS | 50.0% | |
| TCCCATGTGGAGTCTACAAG+GGG | - | chr2_4:21338142-21338161 | Msa0320670:CDS | 50.0% | |
| ACCCCTTGTAGACTCCACAT+GGG | + | chr2_4:21338146-21338165 | None:intergenic | 50.0% | |
| AACCCCTTGTAGACTCCACA+TGG | + | chr2_4:21338147-21338166 | None:intergenic | 50.0% | |
| ATGTGGAGTCTACAAGGGGT+TGG | - | chr2_4:21338146-21338165 | Msa0320670:CDS | 50.0% | |
| TATGCCACTGCTCAAAAGCG+TGG | - | chr2_4:21338497-21338516 | Msa0320670:intron | 50.0% | |
| ! | TATGCCACGCTTTTGAGCAG+TGG | + | chr2_4:21338504-21338523 | None:intergenic | 50.0% |
| AAAGCGTGGCATATACAGGC+TGG | - | chr2_4:21338511-21338530 | Msa0320670:intron | 50.0% | |
| AAGCGTGGCATATACAGGCT+GGG | - | chr2_4:21338512-21338531 | Msa0320670:intron | 50.0% | |
| !!! | GTATGTTTTTGGAACGGCGG+TGG | - | chr2_4:21338950-21338969 | Msa0320670:intron | 50.0% |
| ATCCCTTGCAAGGTTGCCAA+TGG | - | chr2_4:21340041-21340060 | Msa0320670:CDS | 50.0% | |
| AGCCATTGGCAACCTTGCAA+GGG | + | chr2_4:21340046-21340065 | None:intergenic | 50.0% | |
| ! | AGGGCGTATTTTGCAGCCAT+TGG | + | chr2_4:21340060-21340079 | None:intergenic | 50.0% |
| !! | CATTCCAAGACTCGGTGAAG+AGG | + | chr2_4:21340231-21340250 | None:intergenic | 50.0% |
| !! | GACTTGACGGGCTACAACTT+AGG | + | chr2_4:21340295-21340314 | None:intergenic | 50.0% |
| ! | GCTACGGAAGTACAAGTAGC+GGG | - | chr2_4:21340392-21340411 | Msa0320670:intron | 50.0% |
| GCAGGAAATGGAAGAACGTC+CGG | - | chr2_4:21340742-21340761 | Msa0320670:intron | 50.0% | |
| ACATGCAGTAACGCAACGAG+CGG | - | chr2_4:21340860-21340879 | Msa0320670:intron | 50.0% | |
| TTGAAGGTTACGCGCGCATT+TGG | - | chr2_4:21341013-21341032 | Msa0320670:intron | 50.0% | |
| !! | GATGGCTCGGTCGAAACATA+TGG | + | chr2_4:21341802-21341821 | None:intergenic | 50.0% |
| ATGCACGTTCAGTGATGGCT+CGG | + | chr2_4:21341815-21341834 | None:intergenic | 50.0% | |
| CGAGGAAGCAGTGAATCTTG+TGG | - | chr2_4:21341900-21341919 | Msa0320670:intron | 50.0% | |
| AGCTGGATCACCATGAGGAT+TGG | + | chr2_4:21341941-21341960 | None:intergenic | 50.0% | |
| TGAATATTCCGGCTGGAAGG+AGG | - | chr2_4:21342115-21342134 | Msa0320670:intron | 50.0% | |
| TACTTTCTCCTCCTTCCAGC+CGG | + | chr2_4:21342126-21342145 | None:intergenic | 50.0% | |
| CAGCCATTGGCAACCTTGCA+AGG | + | chr2_4:21340047-21340066 | None:intergenic | 55.0% | |
| GTACCCTCTTCACCGAGTCT+TGG | - | chr2_4:21340224-21340243 | Msa0320670:intron | 55.0% | |
| ! | ACGGAAGTACAAGTAGCGGG+AGG | - | chr2_4:21340395-21340414 | Msa0320670:intron | 55.0% |
| ! | GAGAGATGCAGCGGACTTTC+TGG | - | chr2_4:21340502-21340521 | Msa0320670:intron | 55.0% |
| AGGAGACAGTAGAGCAGTGC+TGG | - | chr2_4:21340835-21340854 | Msa0320670:intron | 55.0% | |
| CATGCAGTAACGCAACGAGC+GGG | - | chr2_4:21340861-21340880 | Msa0320670:intron | 55.0% | |
| ! | GTTACGCGCGCATTTGGAGT+TGG | - | chr2_4:21341019-21341038 | Msa0320670:intron | 55.0% |
| ! | GGCTCGGTCGAAACATATGG+CGG | + | chr2_4:21341799-21341818 | None:intergenic | 55.0% |
| !! | CGACAGAGGCATCCCTTGCA+AGG | - | chr2_4:21340031-21340050 | Msa0320670:CDS | 60.0% |
| ACGCAACGAGCGGGAATGAG+AGG | - | chr2_4:21340870-21340889 | Msa0320670:intron | 60.0% | |
| ! | CAAGTAGCGGGAGGAGCTGC+CGG | - | chr2_4:21340404-21340423 | Msa0320670:intron | 65.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr2_4 | gene | 21337692 | 21342430 | 21337692 | ID=Msa0320670;Name=Msa0320670 |
| chr2_4 | mRNA | 21337692 | 21342430 | 21337692 | ID=Msa0320670-mRNA-1;Parent=Msa0320670;Name=Msa0320670-mRNA-1;_AED=0.03;_eAED=0.03;_QI=258|1|1|1|0.5|0.4|5|209|489 |
| chr2_4 | exon | 21337692 | 21338028 | 21337692 | ID=Msa0320670-mRNA-1:exon:7898;Parent=Msa0320670-mRNA-1 |
| chr2_4 | exon | 21338116 | 21338380 | 21338116 | ID=Msa0320670-mRNA-1:exon:7897;Parent=Msa0320670-mRNA-1 |
| chr2_4 | exon | 21339068 | 21340152 | 21339068 | ID=Msa0320670-mRNA-1:exon:7896;Parent=Msa0320670-mRNA-1 |
| chr2_4 | exon | 21340287 | 21340371 | 21340287 | ID=Msa0320670-mRNA-1:exon:7895;Parent=Msa0320670-mRNA-1 |
| chr2_4 | exon | 21342266 | 21342430 | 21342266 | ID=Msa0320670-mRNA-1:exon:7894;Parent=Msa0320670-mRNA-1 |
| chr2_4 | five_prime_UTR | 21342266 | 21342430 | 21342266 | ID=Msa0320670-mRNA-1:five_prime_utr;Parent=Msa0320670-mRNA-1 |
| chr2_4 | five_prime_UTR | 21340287 | 21340371 | 21340287 | ID=Msa0320670-mRNA-1:five_prime_utr;Parent=Msa0320670-mRNA-1 |
| chr2_4 | five_prime_UTR | 21340145 | 21340152 | 21340145 | ID=Msa0320670-mRNA-1:five_prime_utr;Parent=Msa0320670-mRNA-1 |
| chr2_4 | CDS | 21339068 | 21340144 | 21339068 | ID=Msa0320670-mRNA-1:cds;Parent=Msa0320670-mRNA-1 |
| chr2_4 | CDS | 21338116 | 21338380 | 21338116 | ID=Msa0320670-mRNA-1:cds;Parent=Msa0320670-mRNA-1 |
| chr2_4 | CDS | 21337901 | 21338028 | 21337901 | ID=Msa0320670-mRNA-1:cds;Parent=Msa0320670-mRNA-1 |
| chr2_4 | three_prime_UTR | 21337692 | 21337900 | 21337692 | ID=Msa0320670-mRNA-1:three_prime_utr;Parent=Msa0320670-mRNA-1 |
| Gene Sequence |
| Protein sequence |
