Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0405080 | XP_013459649.2 | 91.649 | 467 | 22 | 7 | 1 | 454 | 1 | 463 | 0.0 | 829 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0405080 | sp|F4IDQ5|JASON_ARATH | 38.664 | 494 | 217 | 19 | 18 | 453 | 15 | 480 | 1.11e-71 | 237 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0405080 | A0A396IM97 | 91.649 | 467 | 22 | 7 | 1 | 454 | 1 | 463 | 0.0 | 829 |
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa0006840 | Msa0405080 | 0.806156 | 9.432964e-50 | -8.615850e-47 |
| Msa0030070 | Msa0405080 | 0.804221 | 2.396602e-49 | -8.615850e-47 |
| Msa0032980 | Msa0405080 | 0.804492 | 2.104629e-49 | -8.615850e-47 |
| Msa0040640 | Msa0405080 | 0.814081 | 1.847192e-51 | -8.615850e-47 |
| Msa0091350 | Msa0405080 | 0.837919 | 3.911802e-57 | -8.615850e-47 |
| Msa0094180 | Msa0405080 | 0.840432 | 8.726090e-58 | -8.615850e-47 |
| Msa0106630 | Msa0405080 | 0.806592 | 7.632975e-50 | -8.615850e-47 |
| Msa0109730 | Msa0405080 | 0.805081 | 1.585338e-49 | -8.615850e-47 |
| Msa0113410 | Msa0405080 | 0.803709 | 3.062929e-49 | -8.615850e-47 |
| Msa0125590 | Msa0405080 | 0.816481 | 5.409457e-52 | -8.615850e-47 |
| Msa0127340 | Msa0405080 | 0.831087 | 2.036718e-55 | -8.615850e-47 |
| Msa0153210 | Msa0405080 | 0.814005 | 1.920254e-51 | -8.615850e-47 |
| Msa0184700 | Msa0405080 | 0.818399 | 2.000409e-52 | -8.615850e-47 |
| Msa0186180 | Msa0405080 | 0.815683 | 8.152184e-52 | -8.615850e-47 |
| Msa0225800 | Msa0405080 | 0.833386 | 5.494011e-56 | -8.615850e-47 |
| Msa0373170 | Msa0405080 | 0.822574 | 2.202111e-53 | -8.615850e-47 |
| Msa0383940 | Msa0405080 | 0.819252 | 1.280758e-52 | -8.615850e-47 |
| Msa0405080 | Msa0412130 | 0.830050 | 3.651948e-55 | -8.615850e-47 |
| Msa0405080 | Msa0420430 | 0.825175 | 5.408719e-54 | -8.615850e-47 |
| Msa0405080 | Msa0421750 | 0.819205 | 1.312184e-52 | -8.615850e-47 |
| Msa0405080 | Msa0432690 | 0.828966 | 6.701304e-55 | -8.615850e-47 |
| Msa0405080 | Msa0434360 | 0.821423 | 4.070171e-53 | -8.615850e-47 |
| Msa0405080 | Msa0451100 | 0.855436 | 6.318213e-62 | -8.615850e-47 |
| Msa0405080 | Msa0461550 | 0.851831 | 6.866774e-61 | -8.615850e-47 |
| Msa0405080 | Msa0466520 | 0.833470 | 5.237153e-56 | -8.615850e-47 |
| Msa0405080 | Msa0467690 | 0.818953 | 1.497366e-52 | -8.615850e-47 |
| Msa0405080 | Msa0478140 | 0.800196 | 1.614155e-48 | -8.615850e-47 |
| Msa0405080 | Msa0478200 | 0.804889 | 1.739264e-49 | -8.615850e-47 |
| Msa0405080 | Msa0498370 | 0.859626 | 3.631476e-63 | -8.615850e-47 |
| Msa0405080 | Msa0507810 | 0.842126 | 3.127563e-58 | -8.615850e-47 |
| Msa0405080 | Msa0507820 | 0.842714 | 2.184688e-58 | -8.615850e-47 |
| Msa0405080 | Msa0507920 | 0.844874 | 5.767497e-59 | -8.615850e-47 |
| Msa0405080 | Msa0513080 | 0.834077 | 3.691694e-56 | -8.615850e-47 |
| Msa0405080 | Msa0514020 | 0.806148 | 9.470339e-50 | -8.615850e-47 |
| Msa0405080 | Msa0521320 | 0.834378 | 3.103654e-56 | -8.615850e-47 |
| Msa0405080 | Msa0524320 | 0.805781 | 1.130764e-49 | -8.615850e-47 |
| Msa0405080 | Msa0524430 | 0.808186 | 3.505395e-50 | -8.615850e-47 |
| Msa0405080 | Msa0527850 | 0.818388 | 2.011547e-52 | -8.615850e-47 |
| Msa0405080 | Msa0541740 | 0.819764 | 9.787153e-53 | -8.615850e-47 |
| Msa0405080 | Msa0553210 | 0.811180 | 7.963282e-51 | -8.615850e-47 |
| Msa0405080 | Msa0554300 | 0.830792 | 2.405041e-55 | -8.615850e-47 |
| Msa0405080 | Msa0557850 | 0.853564 | 2.198272e-61 | -8.615850e-47 |
| Msa0405080 | Msa0560570 | 0.811906 | 5.538282e-51 | -8.615850e-47 |
| Msa0405080 | Msa0564980 | 0.826657 | 2.405160e-54 | -8.615850e-47 |
| Msa0405080 | Msa0568710 | 0.810192 | 1.302297e-50 | -8.615850e-47 |
| Msa0405080 | Msa0582460 | 0.828510 | 8.638169e-55 | -8.615850e-47 |
| Msa0405080 | Msa0586200 | 0.830840 | 2.340842e-55 | -8.615850e-47 |
| Msa0405080 | Msa0607330 | 0.810430 | 1.157159e-50 | -8.615850e-47 |
| Msa0405080 | Msa0608350 | 0.853393 | 2.461661e-61 | -8.615850e-47 |
| Msa0405080 | Msa0612520 | 0.817684 | 2.903065e-52 | -8.615850e-47 |
| Msa0405080 | Msa0647440 | 0.844314 | 8.165213e-59 | -8.615850e-47 |
| Msa0405080 | Msa0648760 | 0.837392 | 5.341607e-57 | -8.615850e-47 |
| Msa0405080 | Msa0653160 | 0.845729 | 3.386277e-59 | -8.615850e-47 |
| Msa0405080 | Msa0663290 | 0.812439 | 4.237017e-51 | -8.615850e-47 |
| Msa0405080 | Msa0664070 | 0.810751 | 9.864288e-51 | -8.615850e-47 |
| Msa0405080 | Msa0688620 | 0.841473 | 4.651966e-58 | -8.615850e-47 |
| Msa0405080 | Msa0690320 | 0.869570 | 2.805518e-66 | -8.615850e-47 |
| Msa0405080 | Msa0691270 | 0.853977 | 1.671968e-61 | -8.615850e-47 |
| Msa0405080 | Msa0695560 | 0.837446 | 5.174384e-57 | -8.615850e-47 |
| Msa0405080 | Msa0701250 | 0.819480 | 1.136124e-52 | -8.615850e-47 |
| Msa0405080 | Msa0720280 | 0.813799 | 2.131651e-51 | -8.615850e-47 |
| Msa0405080 | Msa0749190 | 0.832643 | 8.408490e-56 | -8.615850e-47 |
| Msa0405080 | Msa0750520 | 0.840400 | 8.897288e-58 | -8.615850e-47 |
| Msa0405080 | Msa0803140 | 0.820823 | 5.596671e-53 | -8.615850e-47 |
| Msa0405080 | Msa0816080 | 0.814261 | 1.686244e-51 | -8.615850e-47 |
| Msa0405080 | Msa0841500 | 0.822747 | 2.007365e-53 | -8.615850e-47 |
| Msa0405080 | Msa0900090 | 0.803979 | 2.691706e-49 | -8.615850e-47 |
| Msa0405080 | Msa0965470 | 0.839240 | 1.784048e-57 | -8.615850e-47 |
| Msa0405080 | Msa0978980 | 0.801648 | 8.153962e-49 | -8.615850e-47 |
| Msa0405080 | Msa0999950 | 0.814518 | 1.478916e-51 | -8.615850e-47 |
| Msa0405080 | Msa1008850 | 0.820795 | 5.680061e-53 | -8.615850e-47 |
| Msa0405080 | Msa1033420 | 0.806064 | 9.862959e-50 | -8.615850e-47 |
| Msa0405080 | Msa1060900 | 0.806046 | 9.949614e-50 | -8.615850e-47 |
| Msa0405080 | Msa1071410 | 0.839877 | 1.218087e-57 | -8.615850e-47 |
| Msa0405080 | Msa1073060 | 0.809755 | 1.617357e-50 | -8.615850e-47 |
| Msa0405080 | Msa1078080 | 0.808723 | 2.691903e-50 | -8.615850e-47 |
| Msa0405080 | Msa1078990 | 0.801817 | 7.527260e-49 | -8.615850e-47 |
| Msa0405080 | Msa1106220 | 0.864970 | 8.283969e-65 | -8.615850e-47 |
| Msa0405080 | Msa1119380 | 0.809699 | 1.663376e-50 | -8.615850e-47 |
| Msa0405080 | Msa1144990 | 0.802203 | 6.272584e-49 | -8.615850e-47 |
| Msa0405080 | Msa1149450 | 0.807755 | 4.329705e-50 | -8.615850e-47 |
| Msa0405080 | Msa1166820 | 0.802851 | 4.610932e-49 | -8.615850e-47 |
| Msa0405080 | Msa1169170 | 0.818645 | 1.759221e-52 | -8.615850e-47 |
| Msa0405080 | Msa1212920 | 0.809584 | 1.760428e-50 | -8.615850e-47 |
| Msa0405080 | Msa1254420 | 0.830373 | 3.045649e-55 | -8.615850e-47 |
| Msa0405080 | Msa1266690 | 0.805693 | 1.180289e-49 | -8.615850e-47 |
| Msa0405080 | Msa1267930 | 0.818138 | 2.291806e-52 | -8.615850e-47 |
| Msa0405080 | Msa1294790 | 0.837235 | 5.857608e-57 | -8.615850e-47 |
| Msa0405080 | Msa1297070 | 0.810361 | 1.197447e-50 | -8.615850e-47 |
| Msa0405080 | Msa1299980 | 0.800324 | 1.520033e-48 | -8.615850e-47 |
| Msa0405080 | Msa1331650 | 0.811287 | 7.550750e-51 | -8.615850e-47 |
| Msa0405080 | Msa1333360 | 0.813376 | 2.641066e-51 | -8.615850e-47 |
| Msa0405080 | Msa1342810 | 0.811083 | 8.359521e-51 | -8.615850e-47 |
| Msa0405080 | Msa1381800 | 0.844850 | 5.855856e-59 | -8.615850e-47 |
| Msa0405080 | Msa1390210 | 0.802376 | 5.777217e-49 | -8.615850e-47 |
| Msa0405080 | Msa1400780 | 0.803060 | 4.174238e-49 | -8.615850e-47 |
| Msa0405080 | Msa1406720 | 0.824876 | 6.363401e-54 | -8.615850e-47 |
| Msa0405080 | Msa1424370 | 0.802018 | 6.843976e-49 | -8.615850e-47 |
| Msa0405080 | Msa1424590 | 0.801370 | 9.299447e-49 | -8.615850e-47 |
| Msa0405080 | Msa1432060 | 0.802705 | 4.942550e-49 | -8.615850e-47 |
| Msa0405080 | Msa1457840 | 0.806957 | 6.391892e-50 | -8.615850e-47 |
| Msa0249870 | Msa0405080 | 0.805725 | 1.161774e-49 | -8.615850e-47 |
| Msa0260570 | Msa0405080 | 0.837724 | 4.389115e-57 | -8.615850e-47 |
| Msa0260630 | Msa0405080 | 0.878310 | 3.114469e-69 | -8.615850e-47 |
| Msa0281540 | Msa0405080 | 0.843337 | 1.490754e-58 | -8.615850e-47 |
| Msa0320580 | Msa0405080 | 0.833494 | 5.163468e-56 | -8.615850e-47 |
| Msa0341680 | Msa0405080 | 0.812368 | 4.390517e-51 | -8.615850e-47 |
| Msa0344110 | Msa0405080 | 0.836012 | 1.200753e-56 | -8.615850e-47 |
| Msa0350110 | Msa0405080 | 0.876219 | 1.661174e-68 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0405080 | MtrunA17_Chr3g0095751 | 91.649 | 467 | 22 | 7 | 1 | 454 | 1 | 463 | 0.0 | 829 |
| Msa0405080 | MtrunA17_Chr5g0442731 | 45.243 | 473 | 192 | 11 | 15 | 434 | 15 | 473 | 1.46e-113 | 342 |
| Msa0405080 | MtrunA17_Chr1g0183391 | 37.097 | 124 | 61 | 2 | 303 | 413 | 317 | 436 | 4.90e-16 | 80.1 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0405080 | AT1G06660.1 | 38.664 | 494 | 217 | 19 | 18 | 453 | 15 | 480 | 1.13e-72 | 237 |
| Msa0405080 | AT2G30820.2 | 36.226 | 461 | 210 | 16 | 25 | 445 | 1 | 417 | 4.90e-60 | 202 |
| Msa0405080 | AT2G30820.1 | 36.226 | 461 | 210 | 16 | 25 | 445 | 1 | 417 | 4.90e-60 | 202 |
Find 142 sgRNAs with CRISPR-Local
Find 497 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| TCCTCACCTAGGCTGTTATT+TGG | 0.189762 | 3_2:-38977577 | None:intergenic |
| AGAATTGTTGGGTTAAATAT+TGG | 0.195803 | 3_2:+38978785 | Msa0405080:three_prime_UTR |
| GTCCTCCAAAGTTTCGTTCT+TGG | 0.196344 | 3_2:+38976777 | Msa0405080:CDS |
| GAAGCCTGCATCTGTTATTT+TGG | 0.212458 | 3_2:+38977750 | Msa0405080:CDS |
| CGGCACGGCGGCGGAGGCAG+CGG | 0.226596 | 3_2:-38971614 | None:intergenic |
| TAGCATGCCAGCTCACTTTC+TGG | 0.229927 | 3_2:-38978036 | None:intergenic |
| TTGTATTTGTTGGTTGAATT+TGG | 0.246872 | 3_2:-38977922 | None:intergenic |
| TGGAAGAAGGCTTGTCTTCT+TGG | 0.254792 | 3_2:+38977725 | Msa0405080:intron |
| CGATGGAACTGAAATGAATA+AGG | 0.260417 | 3_2:+38977378 | Msa0405080:CDS |
| GGAGGAGAGAAGAAAGAAAA+TGG | 0.286742 | 3_2:+38977771 | Msa0405080:CDS |
| ATCTTCATTGGGGTAGGATT+TGG | 0.293500 | 3_2:-38977496 | None:intergenic |
| TCTTCAATGATATGCTCTTC+TGG | 0.321137 | 3_2:+38971470 | Msa0405080:exon |
| TCCTGTGAGTCATCGGCTTA+TGG | 0.325210 | 3_2:+38977445 | Msa0405080:CDS |
| TCATACTTCTTTGTATTTGT+TGG | 0.327303 | 3_2:-38977932 | None:intergenic |
| GAATTGTTGGGTTAAATATT+GGG | 0.336604 | 3_2:+38978786 | Msa0405080:three_prime_UTR |
| TACACAAACTGGGACTTAAC+AGG | 0.339806 | 3_2:-38977553 | None:intergenic |
| AGCACTGCATTGGGACTTAA+TGG | 0.349682 | 3_2:-38978679 | None:intergenic |
| ATCCCTTCAGATATCTTCAT+TGG | 0.349727 | 3_2:-38977508 | None:intergenic |
| TCAAATATGTACAATACAAA+TGG | 0.359194 | 3_2:-38978760 | None:intergenic |
| CCTGACCTACCTTCTTCACT+TGG | 0.366149 | 3_2:+38971443 | Msa0405080:five_prime_UTR |
| CCTTCATGTAGTAACGATTC+TGG | 0.376618 | 3_2:+38976755 | Msa0405080:CDS |
| TTGAATGGTTGGACATTAGT+TGG | 0.377570 | 3_2:-38976827 | None:intergenic |
| TGTTATTTGGATACACAAAC+TGG | 0.390899 | 3_2:-38977564 | None:intergenic |
| CCTCCGCCGCCGTGCCGTCT+CGG | 0.397513 | 3_2:+38971620 | Msa0405080:CDS |
| CCGAGACGGCACGGCGGCGG+AGG | 0.397598 | 3_2:-38971620 | None:intergenic |
| TCCCTTCAGATATCTTCATT+GGG | 0.406133 | 3_2:-38977507 | None:intergenic |
| TGGGTTAAATATTGGGCATT+GGG | 0.410553 | 3_2:+38978793 | Msa0405080:three_prime_UTR |
| CACGGCGGCGGAGGCAGCGG+CGG | 0.410655 | 3_2:-38971611 | None:intergenic |
| TTGGGAGTTGGCGGATTGAA+TGG | 0.422674 | 3_2:-38976842 | None:intergenic |
| CAAGTACCCCTACTGAAATT+CGG | 0.424717 | 3_2:+38976705 | Msa0405080:CDS |
| TGCAGCAACCATCCCAATGA+TGG | 0.431713 | 3_2:-38977836 | None:intergenic |
| TCATTCTCGTCAAAAGCAAT+TGG | 0.431834 | 3_2:-38978530 | None:intergenic |
| AAGACAATGTGCATCGTAAT+GGG | 0.432569 | 3_2:+38974664 | Msa0405080:CDS |
| TTGGGTTAAATATTGGGCAT+TGG | 0.435150 | 3_2:+38978792 | Msa0405080:three_prime_UTR |
| ATGTTCCTGCGCAAGATTCA+AGG | 0.435844 | 3_2:+38977635 | Msa0405080:CDS |
| AGGGATCACAGAGTGATGAT+AGG | 0.453830 | 3_2:+38974700 | Msa0405080:CDS |
| CCTGTCGATAGGCCCATCAT+TGG | 0.456758 | 3_2:+38977823 | Msa0405080:CDS |
| CCAAGCAATCAGCACTGCAT+TGG | 0.458893 | 3_2:-38978689 | None:intergenic |
| GTGCCGAGACGGCACGGCGG+CGG | 0.460806 | 3_2:-38971623 | None:intergenic |
| CAAGCAATCAGCACTGCATT+GGG | 0.465777 | 3_2:-38978688 | None:intergenic |
| TTAACAGGGTAAACAGTTCC+AGG | 0.469267 | 3_2:-38977538 | None:intergenic |
| CATATTTGATGAGAATTGTT+GGG | 0.471170 | 3_2:+38978774 | Msa0405080:three_prime_UTR |
| GAGCAAGATACTTGAGGAAG+AGG | 0.471401 | 3_2:+38977609 | Msa0405080:CDS |
| GAAGACAATGTGCATCGTAA+TGG | 0.477516 | 3_2:+38974663 | Msa0405080:CDS |
| GATGGAACTGAAATGAATAA+GGG | 0.477713 | 3_2:+38977379 | Msa0405080:CDS |
| AGAAGCCAAGAACGAAACTT+TGG | 0.484007 | 3_2:-38976782 | None:intergenic |
| AATATTGGGCATTGGGAGAT+CGG | 0.485654 | 3_2:+38978800 | Msa0405080:three_prime_UTR |
| ACATATTTGATGAGAATTGT+TGG | 0.487010 | 3_2:+38978773 | Msa0405080:three_prime_UTR |
| TCCTCCAAAATAACAGATGC+AGG | 0.487575 | 3_2:-38977754 | None:intergenic |
| ATGGGAATATCATGACTCTT+CGG | 0.494202 | 3_2:+38977324 | Msa0405080:CDS |
| CAAATATGTACAATACAAAT+GGG | 0.494414 | 3_2:-38978759 | None:intergenic |
| CCAATGCACACAATACTCAA+TGG | 0.495131 | 3_2:+38977305 | Msa0405080:CDS |
| CCAAGTGAAGAAGGTAGGTC+AGG | 0.497945 | 3_2:-38971443 | None:intergenic |
| CTTATTCATTTCAGTTCCAT+CGG | 0.499805 | 3_2:-38977377 | None:intergenic |
| ATGACGCCACGGACTGTGGA+TGG | 0.502061 | 3_2:-38978592 | None:intergenic |
| GTCCATCTCATTACTCTATG+AGG | 0.502624 | 3_2:+38978634 | Msa0405080:three_prime_UTR |
| GCAAAGTTTCTTAAAGCTTG+TGG | 0.503956 | 3_2:+38976674 | Msa0405080:CDS |
| ATCTTCCTTGAATCTTGCGC+AGG | 0.504663 | 3_2:-38977640 | None:intergenic |
| CAATGCACACAATACTCAAT+GGG | 0.505196 | 3_2:+38977306 | Msa0405080:CDS |
| TTCAGTAGGGGTACTTGCTA+TGG | 0.505440 | 3_2:-38976699 | None:intergenic |
| CTCTTCGGAAGGAAGTGGGC+AGG | 0.505993 | 3_2:+38977339 | Msa0405080:CDS |
| GAAGAGGACCCAAGTGAAGA+AGG | 0.507890 | 3_2:-38971452 | None:intergenic |
| CCAATGATGGGCCTATCGAC+AGG | 0.508176 | 3_2:-38977823 | None:intergenic |
| CCAATGCAGTGCTGATTGCT+TGG | 0.511818 | 3_2:+38978689 | Msa0405080:three_prime_UTR |
| CCATTGAGTATTGTGTGCAT+TGG | 0.512181 | 3_2:-38977305 | None:intergenic |
| CTTCGGAAGGAAGTGGGCAG+GGG | 0.512249 | 3_2:+38977341 | Msa0405080:CDS |
| TGCTCCTCCTCCTAAGTGGT+GGG | 0.512880 | 3_2:+38977885 | Msa0405080:CDS |
| TTCATTTCAGTTCCATCGGT+CGG | 0.513509 | 3_2:-38977373 | None:intergenic |
| CATGACTCTTCGGAAGGAAG+TGG | 0.514139 | 3_2:+38977334 | Msa0405080:CDS |
| GATGCTTTCCGAATTTCAGT+AGG | 0.514555 | 3_2:-38976713 | None:intergenic |
| CTGTCGATAGGCCCATCATT+GGG | 0.516223 | 3_2:+38977824 | Msa0405080:CDS |
| TCTTCGGAAGGAAGTGGGCA+GGG | 0.526061 | 3_2:+38977340 | Msa0405080:CDS |
| TATTTCATCCTGTGAGTCAT+CGG | 0.528657 | 3_2:+38977438 | Msa0405080:CDS |
| ATGCTCCTCCTCCTAAGTGG+TGG | 0.530708 | 3_2:+38977884 | Msa0405080:CDS |
| GAGAAGAAAGAAAATGGAGA+TGG | 0.532138 | 3_2:+38977777 | Msa0405080:CDS |
| TTAAAGATTAATAACCTGCT+AGG | 0.536769 | 3_2:-38976914 | None:intergenic |
| TCTACTTTGTTTCTGACCGA+AGG | 0.540444 | 3_2:+38974527 | Msa0405080:CDS |
| GTTCACAGGAAAGATATTTG+CGG | 0.540461 | 3_2:+38978503 | Msa0405080:intron |
| CTGACCTACCTTCTTCACTT+GGG | 0.541465 | 3_2:+38971444 | Msa0405080:five_prime_UTR |
| GAGTTGGCGGATTGAATGGT+TGG | 0.541865 | 3_2:-38976838 | None:intergenic |
| GTTCAGACCACACACCTAGC+AGG | 0.546465 | 3_2:+38976900 | Msa0405080:CDS |
| CAACATGACGCCACGGACTG+TGG | 0.549295 | 3_2:-38978596 | None:intergenic |
| TCAGATATCTTCATTGGGGT+AGG | 0.551648 | 3_2:-38977502 | None:intergenic |
| ATGCTTTCCGAATTTCAGTA+GGG | 0.554306 | 3_2:-38976712 | None:intergenic |
| ACATTACATTGGCTTTGTTG+TGG | 0.556918 | 3_2:-38971645 | None:intergenic |
| GAACACGAAAGCAAGTGAAA+AGG | 0.559259 | 3_2:-38971561 | None:intergenic |
| TTCAGGACCAGAAAGTGAGC+TGG | 0.559748 | 3_2:+38978029 | Msa0405080:intron |
| ACCATAAGCCGATGACTCAC+AGG | 0.559884 | 3_2:-38977446 | None:intergenic |
| CCTCCTCCTAAGTGGTGGGA+TGG | 0.560739 | 3_2:+38977889 | Msa0405080:CDS |
| CCATTGCCATCCCACCACTT+AGG | 0.560739 | 3_2:-38977895 | None:intergenic |
| TCTGAAGGGATGCAAACTCC+TGG | 0.562862 | 3_2:+38977520 | Msa0405080:CDS |
| GTTGTGGTGCCGAGACGGCA+CGG | 0.566404 | 3_2:-38971629 | None:intergenic |
| TCAGAAACAAAGTAGACAAA+CGG | 0.567517 | 3_2:-38974520 | None:intergenic |
| CCTAAGTGGTGGGATGGCAA+TGG | 0.569676 | 3_2:+38977895 | Msa0405080:CDS |
| GTGTATCCAAATAACAGCCT+AGG | 0.571499 | 3_2:+38977571 | Msa0405080:CDS |
| ATGCTACGCCGTTCGAAGAG+AGG | 0.575521 | 3_2:+38978053 | Msa0405080:CDS |
| ACCCCAATGAAGATATCTGA+AGG | 0.577653 | 3_2:+38977505 | Msa0405080:CDS |
| CCATCCCACCACTTAGGAGG+AGG | 0.578549 | 3_2:-38977889 | None:intergenic |
| AGTATCACATTCAAAACGTA+CGG | 0.579270 | 3_2:-38977413 | None:intergenic |
| GGGAGCTATCATCCGACCGA+TGG | 0.584034 | 3_2:+38977361 | Msa0405080:CDS |
| TTGGGATGGTTGCTGCACAT+TGG | 0.584288 | 3_2:+38977842 | Msa0405080:CDS |
| GTTCGAAGAGAGGTTGGAGA+AGG | 0.592220 | 3_2:+38978063 | Msa0405080:CDS |
| CGATAGGCCCATCATTGGGA+TGG | 0.592976 | 3_2:+38977828 | Msa0405080:CDS |
| AGCCAAGAACGAAACTTTGG+AGG | 0.594708 | 3_2:-38976779 | None:intergenic |
| AGAAGAGCATATCATTGAAG+AGG | 0.596165 | 3_2:-38971468 | None:intergenic |
| TACTGAAATTCGGAAAGCAT+CGG | 0.598546 | 3_2:+38976715 | Msa0405080:CDS |
| TTCTCCAACCTCTCTTCGAA+CGG | 0.599277 | 3_2:-38978061 | None:intergenic |
| TACCTCATAGAGTAATGAGA+TGG | 0.599918 | 3_2:-38978636 | None:intergenic |
| AGTCATCGGCTTATGGTGGA+TGG | 0.599998 | 3_2:+38977452 | Msa0405080:CDS |
| GCAGCAACCATCCCAATGAT+GGG | 0.601660 | 3_2:-38977835 | None:intergenic |
| CTGATGCTCCTCCTCCTAAG+TGG | 0.601801 | 3_2:+38977881 | Msa0405080:CDS |
| TCCAAATAACAGCCTAGGTG+AGG | 0.601979 | 3_2:+38977576 | Msa0405080:CDS |
| CTCTAAGAGCAAGATACTTG+AGG | 0.603618 | 3_2:+38977603 | Msa0405080:CDS |
| AGGCAGCGGCGGATTTAGCG+TGG | 0.604654 | 3_2:-38971600 | None:intergenic |
| TTGCCATCCCACCACTTAGG+AGG | 0.606952 | 3_2:-38977892 | None:intergenic |
| TACGCCGTTCGAAGAGAGGT+TGG | 0.606989 | 3_2:+38978057 | Msa0405080:CDS |
| GCTTTGTTGTGGTGCCGAGA+CGG | 0.608775 | 3_2:-38971634 | None:intergenic |
| AGGACCCAAGTGAAGAAGGT+AGG | 0.610700 | 3_2:-38971448 | None:intergenic |
| CCCTTCAGATATCTTCATTG+GGG | 0.615934 | 3_2:-38977506 | None:intergenic |
| CCAGAATCGTTACTACATGA+AGG | 0.617304 | 3_2:-38976755 | None:intergenic |
| ATGACTCTTCGGAAGGAAGT+GGG | 0.617710 | 3_2:+38977335 | Msa0405080:CDS |
| TGCTTTCCGAATTTCAGTAG+GGG | 0.618402 | 3_2:-38976711 | None:intergenic |
| AGGATACTATCATCGCTCAA+AGG | 0.620789 | 3_2:+38978095 | Msa0405080:CDS |
| TGACGCCACGGACTGTGGAT+GGG | 0.622849 | 3_2:-38978591 | None:intergenic |
| CCCGCAAAACTCCTGTCGAT+AGG | 0.624406 | 3_2:+38977812 | Msa0405080:CDS |
| TTCATCCCATCCACAGTCCG+TGG | 0.627583 | 3_2:+38978586 | Msa0405080:CDS |
| CCCCAATGAAGATATCTGAA+GGG | 0.632021 | 3_2:+38977506 | Msa0405080:CDS |
| GAATATCATGACTCTTCGGA+AGG | 0.632054 | 3_2:+38977328 | Msa0405080:CDS |
| CTTTGTAAAGCAGGATGATG+TGG | 0.633113 | 3_2:+38974487 | Msa0405080:intron |
| TGCTGCACATTGGATTGAAG+AGG | 0.634738 | 3_2:+38977852 | Msa0405080:CDS |
| ACACAAACTGGGACTTAACA+GGG | 0.635382 | 3_2:-38977552 | None:intergenic |
| CAGCGGCGGATTTAGCGTGG+TGG | 0.635935 | 3_2:-38971597 | None:intergenic |
| TGTGAGTCATCGGCTTATGG+TGG | 0.636034 | 3_2:+38977448 | Msa0405080:CDS |
| TTAATAACCTGCTAGGTGTG+TGG | 0.641765 | 3_2:-38976907 | None:intergenic |
| GTTGGAGAAGGCATTATCTG+AGG | 0.647231 | 3_2:+38978075 | Msa0405080:CDS |
| TAGATATCAACATGACGCCA+CGG | 0.662557 | 3_2:-38978603 | None:intergenic |
| GTTATTTGGATACACAAACT+GGG | 0.662575 | 3_2:-38977563 | None:intergenic |
| ATGGAACTGAAATGAATAAG+GGG | 0.667299 | 3_2:+38977380 | Msa0405080:CDS |
| TCTTAGAGACATCCTCACCT+AGG | 0.675023 | 3_2:-38977588 | None:intergenic |
| GAACTGAAATGAATAAGGGG+AGG | 0.680443 | 3_2:+38977383 | Msa0405080:CDS |
| TGATAGGCAGCTTAAAGACG+AGG | 0.694138 | 3_2:+38974716 | Msa0405080:CDS |
| GTGGTGCCGAGACGGCACGG+CGG | 0.818841 | 3_2:-38971626 | None:intergenic |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !!! | TTTTAGTTTTTTTTTTTTGT+TGG | + | chr3_2:38972301-38972320 | Msa0405080:intron | 10.0% |
| !!! | ATTTATTGAAATTTTAGTTT+TGG | + | chr3_2:38972545-38972564 | Msa0405080:intron | 10.0% |
| !!! | TTGTTTTTTGAATTTGAATA+TGG | - | chr3_2:38971374-38971393 | None:intergenic | 15.0% |
| !! | AAACTTAATTCAATAATCAT+AGG | - | chr3_2:38971793-38971812 | None:intergenic | 15.0% |
| !! | AAAAAATTGTTAAATAGGAA+TGG | + | chr3_2:38971937-38971956 | Msa0405080:intron | 15.0% |
| !! | AAAAATTGTTAAATAGGAAT+GGG | + | chr3_2:38971938-38971957 | Msa0405080:intron | 15.0% |
| !!! | GATTAATTTTATCGATTTAA+AGG | + | chr3_2:38972041-38972060 | Msa0405080:intron | 15.0% |
| !!! | TTTTTTTTTTTTTTCCTGTT+TGG | + | chr3_2:38972239-38972258 | Msa0405080:intron | 15.0% |
| !!! | TTTTTTTTTTTTTCCTGTTT+GGG | + | chr3_2:38972240-38972259 | Msa0405080:intron | 15.0% |
| !!! | TAGTGTTTGAAATTTTATTT+AGG | + | chr3_2:38972785-38972804 | Msa0405080:intron | 15.0% |
| !! | TTACAAAAATAAACAAGAAA+CGG | - | chr3_2:38973043-38973062 | None:intergenic | 15.0% |
| !! | AAACTTAATTCAATAATCAT+AGG | - | chr3_2:38971793-38971812 | None:intergenic | 15.0% |
| !! | AAAAAATTGTTAAATAGGAA+TGG | + | chr3_2:38971937-38971956 | Msa0405080:intron | 15.0% |
| !! | AAAAATTGTTAAATAGGAAT+GGG | + | chr3_2:38971938-38971957 | Msa0405080:intron | 15.0% |
| !!! | GATTAATTTTATCGATTTAA+AGG | + | chr3_2:38972041-38972060 | Msa0405080:intron | 15.0% |
| !!! | TTTTTTTTTTTTTTCCTGTT+TGG | + | chr3_2:38972239-38972258 | Msa0405080:intron | 15.0% |
| !!! | TTTTTTTTTTTTTCCTGTTT+GGG | + | chr3_2:38972240-38972259 | Msa0405080:intron | 15.0% |
| !!! | TTTTAGGTTTTTTTTTTTGT+TGG | + | chr3_2:38973642-38973661 | Msa0405080:intron | 15.0% |
| !!! | ATTTACTGAAATTTTAGTTT+TGG | + | chr3_2:38973886-38973905 | Msa0405080:intron | 15.0% |
| !!! | AAAGTATTTAATAGTTTTCA+TGG | + | chr3_2:38974290-38974309 | Msa0405080:intron | 15.0% |
| !!! | AAGTATTTAATAGTTTTCAT+GGG | + | chr3_2:38974291-38974310 | Msa0405080:intron | 15.0% |
| !!! | TTGGTTTTAAAAAAAAACAA+GGG | + | chr3_2:38975675-38975694 | Msa0405080:intron | 15.0% |
| !!! | TTAACCTTTTTTTTTTTGAA+AGG | + | chr3_2:38976933-38976952 | Msa0405080:intron | 15.0% |
| !! | TGAAAAGGTTATATTTAATA+TGG | - | chr3_2:38977249-38977268 | None:intergenic | 15.0% |
| !! | TAATGAATTGAAAAATGGAT+CGG | - | chr3_2:38971534-38971553 | None:intergenic | 20.0% |
| !!! | ATCCATTTTTCAATTCATTA+TGG | + | chr3_2:38971534-38971553 | Msa0405080:CDS | 20.0% |
| !!! | TCCATTTTTCAATTCATTAT+GGG | + | chr3_2:38971535-38971554 | Msa0405080:CDS | 20.0% |
| !! | TGTGGAAAAAATTGTTAAAT+AGG | + | chr3_2:38971932-38971951 | Msa0405080:intron | 20.0% |
| !! | ATGAAATTGTGAAATGATAA+TGG | + | chr3_2:38972067-38972086 | Msa0405080:intron | 20.0% |
| !!! | AAATGTTAGTTTAATTAAGC+TGG | + | chr3_2:38971981-38972000 | Msa0405080:intron | 20.0% |
| !!! | TTTTTTGAAGAACCTAAATT+CGG | - | chr3_2:38972194-38972213 | None:intergenic | 20.0% |
| !! | TCTTCAAAAAAAAATTAAGC+TGG | + | chr3_2:38972203-38972222 | Msa0405080:intron | 20.0% |
| !! | AAAAAAAATTAAGCTGGATT+TGG | + | chr3_2:38972209-38972228 | Msa0405080:intron | 20.0% |
| !!! | GAAATTTGTTTATGAAATGA+TGG | + | chr3_2:38972326-38972345 | Msa0405080:intron | 20.0% |
| !!! | TAGGTTTGTTATTGATTTAA+AGG | + | chr3_2:38972499-38972518 | Msa0405080:intron | 20.0% |
| !!! | TAGCTTTGTTATTGATTTAA+TGG | + | chr3_2:38972703-38972722 | Msa0405080:intron | 20.0% |
| !! | TAATGAATTGAAAAATGGAT+CGG | - | chr3_2:38971534-38971553 | None:intergenic | 20.0% |
| !!! | ATCCATTTTTCAATTCATTA+TGG | + | chr3_2:38971534-38971553 | Msa0405080:CDS | 20.0% |
| !!! | TCCATTTTTCAATTCATTAT+GGG | + | chr3_2:38971535-38971554 | Msa0405080:CDS | 20.0% |
| !! | TGTGGAAAAAATTGTTAAAT+AGG | + | chr3_2:38971932-38971951 | Msa0405080:intron | 20.0% |
| !! | ATGAAATTGTGAAATGATAA+TGG | + | chr3_2:38972067-38972086 | Msa0405080:intron | 20.0% |
| !!! | AAATGTTAGTTTAATTAAGC+TGG | + | chr3_2:38971981-38972000 | Msa0405080:intron | 20.0% |
| !!! | TTTTTTGAAGAACCTAAATT+CGG | - | chr3_2:38972194-38972213 | None:intergenic | 20.0% |
| !! | CTTCAAAAAAAAAATTAAGC+TGG | + | chr3_2:38973546-38973565 | Msa0405080:intron | 20.0% |
| !! | AAAAAAAATTAAGCTGGATT+TGG | + | chr3_2:38972209-38972228 | Msa0405080:intron | 20.0% |
| !!! | GAAATTTGTTTATGAAATGA+TGG | + | chr3_2:38972326-38972345 | Msa0405080:intron | 20.0% |
| !!! | TAGGTTTGTTATTGATTTAA+AGG | + | chr3_2:38972499-38972518 | Msa0405080:intron | 20.0% |
| !!! | TAGCTTTGTTATTGATTTAA+TGG | + | chr3_2:38972703-38972722 | Msa0405080:intron | 20.0% |
| !!! | TAGTGTTTGAACTTTTATTT+AGG | + | chr3_2:38974126-38974145 | Msa0405080:intron | 20.0% |
| !! | TAGCAAAATAAATTTACCTT+CGG | - | chr3_2:38974546-38974565 | None:intergenic | 20.0% |
| !!! | TCTCTTTACTTTTTTAATGA+AGG | + | chr3_2:38975308-38975327 | Msa0405080:intron | 20.0% |
| !!! | TTTAGATAATTGAGTTTTTG+AGG | - | chr3_2:38975466-38975485 | None:intergenic | 20.0% |
| !!! | CTTGTTTTTTTTTAAAACCA+AGG | - | chr3_2:38975676-38975695 | None:intergenic | 20.0% |
| !!! | CTTGGTTTTAAAAAAAAACA+AGG | + | chr3_2:38975674-38975693 | Msa0405080:intron | 20.0% |
| !! | AATAGACAAATGACTTAAAA+AGG | - | chr3_2:38976586-38976605 | None:intergenic | 20.0% |
| !!! | TTAAGTTTGTTTACATGATT+TGG | + | chr3_2:38976637-38976656 | Msa0405080:intron | 20.0% |
| !! | ATTGCCTTTCAAAAAAAAAA+AGG | - | chr3_2:38976940-38976959 | None:intergenic | 20.0% |
| !!! | AAAATTGGTGTTTTAGAAAA+TGG | + | chr3_2:38977138-38977157 | Msa0405080:intron | 20.0% |
| !!! | TTTCCCTTTTAGATTTTTTA+AGG | + | chr3_2:38977180-38977199 | Msa0405080:intron | 20.0% |
| !!! | TTCCCTTTTAGATTTTTTAA+GGG | + | chr3_2:38977181-38977200 | Msa0405080:intron | 20.0% |
| !!! | AAAGAAATTAACTTCTGAAA+AGG | - | chr3_2:38977264-38977283 | None:intergenic | 20.0% |
| !!! | AATATCGTTTTAACTTTCAA+AGG | - | chr3_2:38978164-38978183 | None:intergenic | 20.0% |
| !! | CAAATATGTACAATACAAAT+GGG | - | chr3_2:38978762-38978781 | None:intergenic | 20.0% |
| !! | TCAAATATGTACAATACAAA+TGG | - | chr3_2:38978763-38978782 | None:intergenic | 20.0% |
| ! | ACCCATAATGAATTGAAAAA+TGG | - | chr3_2:38971539-38971558 | None:intergenic | 25.0% |
| ! | GATTATGAGTTACATTACAT+TGG | - | chr3_2:38971659-38971678 | None:intergenic | 25.0% |
| ! | ACACAGAAAAAAACAAGAAA+CGG | - | chr3_2:38971690-38971709 | None:intergenic | 25.0% |
| !!! | CTCTTGTTATTTATAAAGCA+CGG | + | chr3_2:38971712-38971731 | Msa0405080:intron | 25.0% |
| !! | AATTCCAAGAATTTTTGTTG+TGG | + | chr3_2:38971914-38971933 | Msa0405080:intron | 25.0% |
| !! | TTTTCCACAACAAAAATTCT+TGG | - | chr3_2:38971921-38971940 | None:intergenic | 25.0% |
| !! | AGTTTAATTAAGCTGGATTT+TGG | + | chr3_2:38972100-38972119 | Msa0405080:intron | 25.0% |
| !! | GTTTAATTAAGCTGGATTTT+GGG | + | chr3_2:38972101-38972120 | Msa0405080:intron | 25.0% |
| ! | GTTGAAATGATAGCTTAATT+CGG | + | chr3_2:38972406-38972425 | Msa0405080:intron | 25.0% |
| !!! | TTTGGATTTTTTGTGTGTTT+AGG | + | chr3_2:38972480-38972499 | Msa0405080:intron | 25.0% |
| ! | AGGATTATGAAATGTAATGA+TGG | + | chr3_2:38972519-38972538 | Msa0405080:intron | 25.0% |
| ! | ATGATGAATTTGTAGATTTC+AGG | + | chr3_2:38972643-38972662 | Msa0405080:intron | 25.0% |
| !!! | AATGGATTATGAAATGATGA+AGG | + | chr3_2:38972721-38972740 | Msa0405080:intron | 25.0% |
| !!! | TTTTATTTAGGAGCTTTGTT+TGG | + | chr3_2:38972797-38972816 | Msa0405080:intron | 25.0% |
| ! | ACCCATAATGAATTGAAAAA+TGG | - | chr3_2:38971539-38971558 | None:intergenic | 25.0% |
| ! | GATTATGAGTTACATTACAT+TGG | - | chr3_2:38971659-38971678 | None:intergenic | 25.0% |
| !! | AATTCCAAGAATTTTTGTTG+TGG | + | chr3_2:38971914-38971933 | Msa0405080:intron | 25.0% |
| !! | TTTTCCACAACAAAAATTCT+TGG | - | chr3_2:38971921-38971940 | None:intergenic | 25.0% |
| !! | AGTTTAATTAAGCTGGATTT+TGG | + | chr3_2:38972100-38972119 | Msa0405080:intron | 25.0% |
| !! | GTTTAATTAAGCTGGATTTT+GGG | + | chr3_2:38972101-38972120 | Msa0405080:intron | 25.0% |
| !!! | GTTCTGGTTTTTGATATTTT+AGG | + | chr3_2:38972285-38972304 | Msa0405080:intron | 25.0% |
| ! | GTTGAAATGATAGCTTAATT+CGG | + | chr3_2:38972406-38972425 | Msa0405080:intron | 25.0% |
| !!! | TTTGGATTTTTTGTGTGTTT+AGG | + | chr3_2:38972480-38972499 | Msa0405080:intron | 25.0% |
| ! | AGGATTATGAAATGTAATGA+TGG | + | chr3_2:38972519-38972538 | Msa0405080:intron | 25.0% |
| ! | ATGATGAATTTGTAGATTTC+AGG | + | chr3_2:38972643-38972662 | Msa0405080:intron | 25.0% |
| !!! | AATGGATTATGAAATGATGA+AGG | + | chr3_2:38972721-38972740 | Msa0405080:intron | 25.0% |
| !!! | TTTTATTTAGGAGCTTTGTT+TGG | + | chr3_2:38972797-38972816 | Msa0405080:intron | 25.0% |
| !!! | GTTCTAGTTACTGAAATTTT+AGG | + | chr3_2:38974254-38974273 | Msa0405080:intron | 25.0% |
| !!! | CTTTTACAGTTTTGATGTTA+TGG | + | chr3_2:38974592-38974611 | Msa0405080:intron | 25.0% |
| !! | TCTCAGTAATGTACTAATTT+TGG | + | chr3_2:38974617-38974636 | Msa0405080:intron | 25.0% |
| !! | CTCAGTAATGTACTAATTTT+GGG | + | chr3_2:38974618-38974637 | Msa0405080:intron | 25.0% |
| !! | TCAGTAATGTACTAATTTTG+GGG | + | chr3_2:38974619-38974638 | Msa0405080:intron | 25.0% |
| !!! | GGGTTTAAATTTTGAAAAGA+GGG | + | chr3_2:38974639-38974658 | Msa0405080:intron | 25.0% |
| ! | GAAAGATAAAAAATAGCTTC+AGG | - | chr3_2:38974984-38975003 | None:intergenic | 25.0% |
| ! | AATGTTACCGTTTATGTTTA+TGG | + | chr3_2:38975080-38975099 | Msa0405080:intron | 25.0% |
| !! | TGCTTTAACTTAGTTAATGT+AGG | + | chr3_2:38975141-38975160 | Msa0405080:intron | 25.0% |
| ! | TTACAGATAAATGCACAATT+TGG | + | chr3_2:38975260-38975279 | Msa0405080:intron | 25.0% |
| ! | TAATGAAGGTAGAAATTATC+TGG | + | chr3_2:38975322-38975341 | Msa0405080:intron | 25.0% |
| ! | GACATACTATATAGATATAC+AGG | - | chr3_2:38975390-38975409 | None:intergenic | 25.0% |
| ! | TTTCACGTAAAATGAAATAG+CGG | - | chr3_2:38975641-38975660 | None:intergenic | 25.0% |
| ! | CCACAAAAACAACAAAAATA+AGG | - | chr3_2:38976064-38976083 | None:intergenic | 25.0% |
| !!! | CCTTATTTTTGTTGTTTTTG+TGG | + | chr3_2:38976061-38976080 | Msa0405080:intron | 25.0% |
| ! | TAGATCATAGTAGTTAATAG+CGG | - | chr3_2:38976407-38976426 | None:intergenic | 25.0% |
| !!! | CATTCTTCACATTGTTTTTT+GGG | - | chr3_2:38976863-38976882 | None:intergenic | 25.0% |
| ! | CAAAAAACAATGTGAAGAAT+GGG | + | chr3_2:38976862-38976881 | Msa0405080:CDS | 25.0% |
| ! | TTAAAGATTAATAACCTGCT+AGG | - | chr3_2:38976917-38976936 | None:intergenic | 25.0% |
| ! | TGCCCTTAAAAAATCTAAAA+GGG | - | chr3_2:38977186-38977205 | None:intergenic | 25.0% |
| ! | ATGCCCTTAAAAAATCTAAA+AGG | - | chr3_2:38977187-38977206 | None:intergenic | 25.0% |
| !!! | TTTTTTAAGGGCATATCTTA+TGG | + | chr3_2:38977193-38977212 | Msa0405080:intron | 25.0% |
| !!! | TTTTTAAGGGCATATCTTAT+GGG | + | chr3_2:38977194-38977213 | Msa0405080:intron | 25.0% |
| !! | TTGTATTTGTTGGTTGAATT+TGG | - | chr3_2:38977925-38977944 | None:intergenic | 25.0% |
| ! | TCATACTTCTTTGTATTTGT+TGG | - | chr3_2:38977935-38977954 | None:intergenic | 25.0% |
| ! | GAAAACAATCAGCATTAATT+AGG | - | chr3_2:38978012-38978031 | None:intergenic | 25.0% |
| !!! | AATTAATGCTGATTGTTTTC+AGG | + | chr3_2:38978012-38978031 | Msa0405080:intron | 25.0% |
| ! | TGGTAAATTGCTTATGTATA+TGG | - | chr3_2:38978332-38978351 | None:intergenic | 25.0% |
| !!! | TGTCTTTTTGATTTGTGATT+TGG | + | chr3_2:38978481-38978500 | Msa0405080:intron | 25.0% |
| ! | ACATATTTGATGAGAATTGT+TGG | + | chr3_2:38978773-38978792 | Msa0405080:three_prime_UTR | 25.0% |
| ! | CATATTTGATGAGAATTGTT+GGG | + | chr3_2:38978774-38978793 | Msa0405080:three_prime_UTR | 25.0% |
| ! | AGAATTGTTGGGTTAAATAT+TGG | + | chr3_2:38978785-38978804 | Msa0405080:three_prime_UTR | 25.0% |
| ! | GAATTGTTGGGTTAAATATT+GGG | + | chr3_2:38978786-38978805 | Msa0405080:three_prime_UTR | 25.0% |
| TTGTTAAATAGGAATGGGAA+TGG | + | chr3_2:38971943-38971962 | Msa0405080:intron | 30.0% | |
| TGTTAAATAGGAATGGGAAT+GGG | + | chr3_2:38971944-38971963 | Msa0405080:intron | 30.0% | |
| !! | GATGATGAATTTGTTGATTG+CGG | + | chr3_2:38972262-38972281 | Msa0405080:intron | 30.0% |
| !! | ATGATGAATTTGTTGATTGC+GGG | + | chr3_2:38972263-38972282 | Msa0405080:intron | 30.0% |
| !!! | ATGTTCGTTGTTGTTGTTTT+TGG | + | chr3_2:38972462-38972481 | Msa0405080:intron | 30.0% |
| GAGAAATTGTGAAATGAGAA+TGG | + | chr3_2:38972567-38972586 | Msa0405080:intron | 30.0% | |
| !! | AATTTGTAGATTTCAGGTTC+TGG | + | chr3_2:38972649-38972668 | Msa0405080:intron | 30.0% |
| !!! | TTCTGGTTTCTGAAGTTTTA+TGG | + | chr3_2:38972666-38972685 | Msa0405080:intron | 30.0% |
| ! | TTGGTAGCTAAAATGTTGAA+TGG | + | chr3_2:38972816-38972835 | Msa0405080:intron | 30.0% |
| TTGTTAAATAGGAATGGGAA+TGG | + | chr3_2:38971943-38971962 | Msa0405080:intron | 30.0% | |
| TGTTAAATAGGAATGGGAAT+GGG | + | chr3_2:38971944-38971963 | Msa0405080:intron | 30.0% | |
| !! | GATGATGAATTTGTTGATTG+CGG | + | chr3_2:38972262-38972281 | Msa0405080:intron | 30.0% |
| !! | ATGATGAATTTGTTGATTGC+GGG | + | chr3_2:38972263-38972282 | Msa0405080:intron | 30.0% |
| !!! | ATGTTCGTTGTTGTTGTTTT+TGG | + | chr3_2:38972462-38972481 | Msa0405080:intron | 30.0% |
| GAGAAATTGTGATATGAGAA+TGG | + | chr3_2:38973908-38973927 | Msa0405080:intron | 30.0% | |
| !! | AATTTGTAGATTTCAGGTTC+TGG | + | chr3_2:38972649-38972668 | Msa0405080:intron | 30.0% |
| !!! | TTCTGGTTTCTGAAGTTTTA+TGG | + | chr3_2:38972666-38972685 | Msa0405080:intron | 30.0% |
| ! | TTGGTAGCTAAAATGTTGAA+TGG | + | chr3_2:38972816-38972835 | Msa0405080:intron | 30.0% |
| AAATTCATCATCTCAAGAAG+GGG | - | chr3_2:38974223-38974242 | None:intergenic | 30.0% | |
| CAAATTCATCATCTCAAGAA+GGG | - | chr3_2:38974224-38974243 | None:intergenic | 30.0% | |
| ACAAATTCATCATCTCAAGA+AGG | - | chr3_2:38974225-38974244 | None:intergenic | 30.0% | |
| !!! | TTTTGACTTTTTGATGTGAC+TGG | + | chr3_2:38974452-38974471 | Msa0405080:intron | 30.0% |
| TCAGAAACAAAGTAGACAAA+CGG | - | chr3_2:38974523-38974542 | None:intergenic | 30.0% | |
| !! | GGGGTTTAAATTTTGAAAAG+AGG | + | chr3_2:38974638-38974657 | Msa0405080:intron | 30.0% |
| TGTAATGTGTATTCGCAATT+CGG | + | chr3_2:38974830-38974849 | Msa0405080:intron | 30.0% | |
| ! | AGAACTCTACTTGATAGTAT+TGG | + | chr3_2:38974912-38974931 | Msa0405080:intron | 30.0% |
| TCAATTCAATACTTGAGAGT+TGG | - | chr3_2:38975015-38975034 | None:intergenic | 30.0% | |
| ! | CTTTAGTTTCTGTTTAAGTG+AGG | + | chr3_2:38975050-38975069 | Msa0405080:intron | 30.0% |
| CTGTCTACCATAAACATAAA+CGG | - | chr3_2:38975090-38975109 | None:intergenic | 30.0% | |
| ATACAATGTAGTGAGTATCA+AGG | - | chr3_2:38975207-38975226 | None:intergenic | 30.0% | |
| !! | CATTGTATTTTTCGATCTCA+AGG | + | chr3_2:38975219-38975238 | Msa0405080:intron | 30.0% |
| AAGAGATTGCAGTTAAGTTA+TGG | - | chr3_2:38975294-38975313 | None:intergenic | 30.0% | |
| TAAAGCAGAGTAGTTAATAG+CGG | + | chr3_2:38975482-38975501 | Msa0405080:intron | 30.0% | |
| TGAAAATACAAGATTCTCCT+TGG | + | chr3_2:38975656-38975675 | Msa0405080:intron | 30.0% | |
| GAGAGAAACTGAAGTTATTA+GGG | - | chr3_2:38975723-38975742 | None:intergenic | 30.0% | |
| AGAGAGAAACTGAAGTTATT+AGG | - | chr3_2:38975724-38975743 | None:intergenic | 30.0% | |
| CTTCCTTCTTTCATTCTTTA+CGG | + | chr3_2:38975742-38975761 | Msa0405080:intron | 30.0% | |
| AACGCATTTCTCTCAAAAAA+CGG | + | chr3_2:38975788-38975807 | Msa0405080:intron | 30.0% | |
| TGTTTATGAACAAAACAGAG+AGG | - | chr3_2:38975940-38975959 | None:intergenic | 30.0% | |
| TTTATGAACAAGCAGAATAG+AGG | - | chr3_2:38975991-38976010 | None:intergenic | 30.0% | |
| TTGCTTGGCAATTTAATCAT+TGG | + | chr3_2:38976181-38976200 | Msa0405080:intron | 30.0% | |
| TTGGCAATTTAATCATTGGA+AGG | + | chr3_2:38976185-38976204 | Msa0405080:intron | 30.0% | |
| TTACTGTGATTTCTGTGATA+AGG | + | chr3_2:38976230-38976249 | Msa0405080:intron | 30.0% | |
| ! | TAAAATAGCTGATGTTTTGC+TGG | + | chr3_2:38976432-38976451 | Msa0405080:intron | 30.0% |
| !!! | GACTTAAAAAGGTGTTTTTG+AGG | - | chr3_2:38976575-38976594 | None:intergenic | 30.0% |
| !!! | TGATTTGGTAAACATTTTGC+AGG | + | chr3_2:38976652-38976671 | Msa0405080:intron | 30.0% |
| !!! | CCATTCTTCACATTGTTTTT+TGG | - | chr3_2:38976864-38976883 | None:intergenic | 30.0% |
| CCAAAAAACAATGTGAAGAA+TGG | + | chr3_2:38976861-38976880 | Msa0405080:CDS | 30.0% | |
| AACAACCACACAATCAATTT+CGG | + | chr3_2:38977006-38977025 | Msa0405080:intron | 30.0% | |
| TAAGCCTTTCTTATACAAGA+TGG | - | chr3_2:38977068-38977087 | None:intergenic | 30.0% | |
| TCTTGTATAAGAAAGGCTTA+AGG | + | chr3_2:38977068-38977087 | Msa0405080:intron | 30.0% | |
| AATGTGTTCCTCTTCAAAAT+TGG | + | chr3_2:38977123-38977142 | Msa0405080:intron | 30.0% | |
| !! | CTAAAACACCAATTTTGAAG+AGG | - | chr3_2:38977134-38977153 | None:intergenic | 30.0% |
| !! | TTTTAAGGGCATATCTTATG+GGG | + | chr3_2:38977195-38977214 | Msa0405080:intron | 30.0% |
| CTTATTCATTTCAGTTCCAT+CGG | - | chr3_2:38977380-38977399 | None:intergenic | 30.0% | |
| GATGGAACTGAAATGAATAA+GGG | + | chr3_2:38977379-38977398 | Msa0405080:CDS | 30.0% | |
| ATGGAACTGAAATGAATAAG+GGG | + | chr3_2:38977380-38977399 | Msa0405080:CDS | 30.0% | |
| AGTATCACATTCAAAACGTA+CGG | - | chr3_2:38977416-38977435 | None:intergenic | 30.0% | |
| GTTATTTGGATACACAAACT+GGG | - | chr3_2:38977566-38977585 | None:intergenic | 30.0% | |
| ! | TGTTATTTGGATACACAAAC+TGG | - | chr3_2:38977567-38977586 | None:intergenic | 30.0% |
| ! | ATACAAAGAAGTATGATCCT+TGG | + | chr3_2:38977939-38977958 | Msa0405080:intron | 30.0% |
| AGACTTCTAATTCTTTCACA+TGG | - | chr3_2:38977975-38977994 | None:intergenic | 30.0% | |
| AGGAATTCAACGATACATAA+AGG | - | chr3_2:38978256-38978275 | None:intergenic | 30.0% | |
| AGAAACCTGTATGATTTAGT+GGG | - | chr3_2:38978453-38978472 | None:intergenic | 30.0% | |
| ! | AGAAGAGCATATCATTGAAG+AGG | - | chr3_2:38971471-38971490 | None:intergenic | 35.0% |
| TCTTCAATGATATGCTCTTC+TGG | + | chr3_2:38971470-38971489 | Msa0405080:exon | 35.0% | |
| GGATCGGAAAAAAAAAACGA+AGG | - | chr3_2:38971518-38971537 | None:intergenic | 35.0% | |
| !! | ACATTACATTGGCTTTGTTG+TGG | - | chr3_2:38971648-38971667 | None:intergenic | 35.0% |
| !! | AATTAAGCTGGATTTTGGGT+TGG | + | chr3_2:38972105-38972124 | Msa0405080:intron | 35.0% |
| TGAAGAACCTAAATTCGGTA+GGG | - | chr3_2:38972189-38972208 | None:intergenic | 35.0% | |
| TTGAAGAACCTAAATTCGGT+AGG | - | chr3_2:38972190-38972209 | None:intergenic | 35.0% | |
| ACAAATTCATCATCCCAAAC+AGG | - | chr3_2:38972256-38972275 | None:intergenic | 35.0% | |
| GTGAAATACTGAAATGTGAG+TGG | + | chr3_2:38972384-38972403 | Msa0405080:intron | 35.0% | |
| CAACGAACATAAGAACAAAG+AGG | - | chr3_2:38972452-38972471 | None:intergenic | 35.0% | |
| GGATCGGAAAAAAAAAACGA+AGG | - | chr3_2:38971518-38971537 | None:intergenic | 35.0% | |
| !! | ACATTACATTGGCTTTGTTG+TGG | - | chr3_2:38971648-38971667 | None:intergenic | 35.0% |
| TATCTAAGCAATGCACTTCT+TGG | + | chr3_2:38973071-38973090 | Msa0405080:intron | 35.0% | |
| !! | AATTAAGCTGGATTTTGGGT+TGG | + | chr3_2:38972105-38972124 | Msa0405080:intron | 35.0% |
| TTGAAGAACCTAAATTCGGA+CGG | - | chr3_2:38973532-38973551 | None:intergenic | 35.0% | |
| ACAAATTCATCATCCCAAAC+AGG | - | chr3_2:38972256-38972275 | None:intergenic | 35.0% | |
| GTGAAATACTGAAATGTGAG+TGG | + | chr3_2:38972384-38972403 | Msa0405080:intron | 35.0% | |
| CAACGAACATAAGAACAAAG+AGG | - | chr3_2:38972452-38972471 | None:intergenic | 35.0% | |
| !! | CTTCTGGTTGCTGAAATTTT+TGG | + | chr3_2:38974346-38974365 | Msa0405080:intron | 35.0% |
| ! | GAATTTGCTCTTTGTAAAGC+AGG | + | chr3_2:38974478-38974497 | Msa0405080:intron | 35.0% |
| AAGACAATGTGCATCGTAAT+GGG | + | chr3_2:38974664-38974683 | Msa0405080:CDS | 35.0% | |
| TTCATGCATGTTTAGCTGTT+TGG | + | chr3_2:38974790-38974809 | Msa0405080:intron | 35.0% | |
| !! | CAGTGTCTTAGTCTTATATC+AGG | - | chr3_2:38974866-38974885 | None:intergenic | 35.0% |
| GATATAAGACTAAGACACTG+AGG | + | chr3_2:38974866-38974885 | Msa0405080:intron | 35.0% | |
| ATAGCTTCAGGTCATAATTC+TGG | - | chr3_2:38974972-38974991 | None:intergenic | 35.0% | |
| GGTAAGTGTTATACTAACGA+TGG | - | chr3_2:38975169-38975188 | None:intergenic | 35.0% | |
| !! | ATTTTTCGATCTCAAGGTTC+TGG | + | chr3_2:38975225-38975244 | Msa0405080:intron | 35.0% |
| AGAAATTATCTGGTTGTCCA+TGG | + | chr3_2:38975332-38975351 | Msa0405080:intron | 35.0% | |
| !!! | TTTTGAGGTGAGAAGATGAA+AGG | - | chr3_2:38975770-38975789 | None:intergenic | 35.0% |
| ! | TTTGAGAGAAATGCGTTTTG+AGG | - | chr3_2:38975785-38975804 | None:intergenic | 35.0% |
| TATAGAAGAGAGCAAACACA+AGG | - | chr3_2:38975911-38975930 | None:intergenic | 35.0% | |
| ATAGAGGATGAACAAAACAG+AGG | - | chr3_2:38975975-38975994 | None:intergenic | 35.0% | |
| CATGTGCTCAAAGACATAAA+CGG | + | chr3_2:38976139-38976158 | Msa0405080:intron | 35.0% | |
| !! | TAGTAGTTAATAGCGGATAG+CGG | - | chr3_2:38976400-38976419 | None:intergenic | 35.0% |
| GCAAAGTTTCTTAAAGCTTG+TGG | + | chr3_2:38976674-38976693 | Msa0405080:CDS | 35.0% | |
| ATGCTTTCCGAATTTCAGTA+GGG | - | chr3_2:38976715-38976734 | None:intergenic | 35.0% | |
| ! | TACTGAAATTCGGAAAGCAT+CGG | + | chr3_2:38976715-38976734 | Msa0405080:CDS | 35.0% |
| TTGAATGGTTGGACATTAGT+TGG | - | chr3_2:38976830-38976849 | None:intergenic | 35.0% | |
| !!! | TCACATTGTTTTTTGGGAGT+TGG | - | chr3_2:38976857-38976876 | None:intergenic | 35.0% |
| TCTTATTACTATTAGCGCGA+TGG | + | chr3_2:38977038-38977057 | Msa0405080:intron | 35.0% | |
| CTTATTACTATTAGCGCGAT+GGG | + | chr3_2:38977039-38977058 | Msa0405080:intron | 35.0% | |
| GACACCATCTTGTATAAGAA+AGG | + | chr3_2:38977061-38977080 | Msa0405080:intron | 35.0% | |
| ! | GAAGAGGAACACATTTTCTT+AGG | - | chr3_2:38977118-38977137 | None:intergenic | 35.0% |
| CAATGCACACAATACTCAAT+GGG | + | chr3_2:38977306-38977325 | Msa0405080:CDS | 35.0% | |
| ATGGGAATATCATGACTCTT+CGG | + | chr3_2:38977324-38977343 | Msa0405080:CDS | 35.0% | |
| CGATGGAACTGAAATGAATA+AGG | + | chr3_2:38977378-38977397 | Msa0405080:CDS | 35.0% | |
| TATTTCATCCTGTGAGTCAT+CGG | + | chr3_2:38977438-38977457 | Msa0405080:CDS | 35.0% | |
| TCCCTTCAGATATCTTCATT+GGG | - | chr3_2:38977510-38977529 | None:intergenic | 35.0% | |
| ATCCCTTCAGATATCTTCAT+TGG | - | chr3_2:38977511-38977530 | None:intergenic | 35.0% | |
| !! | ACGGTAGATTCACTTTTATC+TGG | - | chr3_2:38977706-38977725 | None:intergenic | 35.0% |
| AGATAAAAGTGAATCTACCG+TGG | + | chr3_2:38977705-38977724 | Msa0405080:intron | 35.0% | |
| GAGAAGAAAGAAAATGGAGA+TGG | + | chr3_2:38977777-38977796 | Msa0405080:CDS | 35.0% | |
| AGAAGTTTGTACTTCTGATG+CGG | + | chr3_2:38978185-38978204 | Msa0405080:intron | 35.0% | |
| ! | GTAAGTGGTCTTTTGTCAAA+TGG | - | chr3_2:38978352-38978371 | None:intergenic | 35.0% |
| GCACTCAATACAAAAGTAAG+TGG | - | chr3_2:38978367-38978386 | None:intergenic | 35.0% | |
| !! | AGTCTCGCGATTTTGATAAT+TGG | + | chr3_2:38978426-38978445 | Msa0405080:intron | 35.0% |
| GAGAAACCTGTATGATTTAG+TGG | - | chr3_2:38978454-38978473 | None:intergenic | 35.0% | |
| !! | TGATTTGTGATTTGGTTCAC+AGG | + | chr3_2:38978489-38978508 | Msa0405080:intron | 35.0% |
| GTTCACAGGAAAGATATTTG+CGG | + | chr3_2:38978503-38978522 | Msa0405080:intron | 35.0% | |
| TCATTCTCGTCAAAAGCAAT+TGG | - | chr3_2:38978533-38978552 | None:intergenic | 35.0% | |
| TACCTCATAGAGTAATGAGA+TGG | - | chr3_2:38978639-38978658 | None:intergenic | 35.0% | |
| TTGGGTTAAATATTGGGCAT+TGG | + | chr3_2:38978792-38978811 | Msa0405080:three_prime_UTR | 35.0% | |
| TGGGTTAAATATTGGGCATT+GGG | + | chr3_2:38978793-38978812 | Msa0405080:three_prime_UTR | 35.0% | |
| GAACACGAAAGCAAGTGAAA+AGG | - | chr3_2:38971564-38971583 | None:intergenic | 40.0% | |
| TATAAAGCACGGACACTTCT+TGG | + | chr3_2:38971723-38971742 | Msa0405080:intron | 40.0% | |
| AATAGGAATGGGAATGGGAA+TGG | + | chr3_2:38971949-38971968 | Msa0405080:intron | 40.0% | |
| GAAGAACCTAAATTCGGTAG+GGG | - | chr3_2:38972188-38972207 | None:intergenic | 40.0% | |
| !! | AATTTGTTGATTGCGGGTTC+TGG | + | chr3_2:38972269-38972288 | Msa0405080:intron | 40.0% |
| GAACACGAAAGCAAGTGAAA+AGG | - | chr3_2:38971564-38971583 | None:intergenic | 40.0% | |
| AGCAATGCACTTCTTGGATT+AGG | + | chr3_2:38973077-38973096 | Msa0405080:intron | 40.0% | |
| GCAATGCACTTCTTGGATTA+GGG | + | chr3_2:38973078-38973097 | Msa0405080:intron | 40.0% | |
| ! | CAATGCACTTCTTGGATTAG+GGG | + | chr3_2:38973079-38973098 | Msa0405080:intron | 40.0% |
| AATAGGAATGGGAATGGGAA+TGG | + | chr3_2:38971949-38971968 | Msa0405080:intron | 40.0% | |
| TGAAGAACCTAAATTCGGAC+GGG | - | chr3_2:38973531-38973550 | None:intergenic | 40.0% | |
| !! | AATTTGTTGATTGCGGGTTC+TGG | + | chr3_2:38972269-38972288 | Msa0405080:intron | 40.0% |
| GTTGAGATGATCGCTTCATT+CGG | + | chr3_2:38972838-38972857 | Msa0405080:intron | 40.0% | |
| TTCTGAGTATGTTCTGCTTC+TGG | + | chr3_2:38974330-38974349 | Msa0405080:intron | 40.0% | |
| CTTTGTAAAGCAGGATGATG+TGG | + | chr3_2:38974487-38974506 | Msa0405080:intron | 40.0% | |
| !! | TCTACTTTGTTTCTGACCGA+AGG | + | chr3_2:38974527-38974546 | Msa0405080:CDS | 40.0% |
| GAAGACAATGTGCATCGTAA+TGG | + | chr3_2:38974663-38974682 | Msa0405080:CDS | 40.0% | |
| !! | TCGTAATGGGAGAAGTTTTG+AGG | + | chr3_2:38974677-38974696 | Msa0405080:CDS | 40.0% |
| !!! | TAATGGGAGAAGTTTTGAGG+AGG | + | chr3_2:38974680-38974699 | Msa0405080:CDS | 40.0% |
| !!! | AATGGGAGAAGTTTTGAGGA+GGG | + | chr3_2:38974681-38974700 | Msa0405080:CDS | 40.0% |
| ATGCATGTTTAGCTGTTTGG+AGG | + | chr3_2:38974793-38974812 | Msa0405080:intron | 40.0% | |
| GTCTTATATCAGGAGCGAAA+TGG | - | chr3_2:38974856-38974875 | None:intergenic | 40.0% | |
| CGAAGATGTCTCATTGAGAA+TGG | + | chr3_2:38974946-38974965 | Msa0405080:intron | 40.0% | |
| ! | CATTGAAGAAGTAAGCACTG+TGG | - | chr3_2:38975113-38975132 | None:intergenic | 40.0% |
| TCAAGGCTTTCTTAGTATCG+TGG | - | chr3_2:38975190-38975209 | None:intergenic | 40.0% | |
| ATACACCACAAATCTTAGCC+AGG | - | chr3_2:38975364-38975383 | None:intergenic | 40.0% | |
| TACAAGCATATGCATGTCCT+GGG | + | chr3_2:38975417-38975436 | Msa0405080:intron | 40.0% | |
| ! | TTTTGTGGACAACACAGTCA+TGG | + | chr3_2:38976076-38976095 | Msa0405080:intron | 40.0% |
| AGCAATGTCGAGATTATCAC+CGG | - | chr3_2:38976166-38976185 | None:intergenic | 40.0% | |
| GTGATAATCTCGACATTGCT+TGG | + | chr3_2:38976166-38976185 | Msa0405080:intron | 40.0% | |
| TTCTGTGATAAGGTCAGCAA+TGG | + | chr3_2:38976240-38976259 | Msa0405080:intron | 40.0% | |
| TAGAGCAAGAAGACACCAAT+TGG | + | chr3_2:38976272-38976291 | Msa0405080:intron | 40.0% | |
| AGAGCAAGAAGACACCAATT+GGG | + | chr3_2:38976273-38976292 | Msa0405080:intron | 40.0% | |
| AGACACCAATTGGGAATTAC+AGG | + | chr3_2:38976282-38976301 | Msa0405080:intron | 40.0% | |
| CATCACCTGTAATTCCCAAT+TGG | - | chr3_2:38976290-38976309 | None:intergenic | 40.0% | |
| ! | CTATCCCGCTATAGCATTTT+GGG | + | chr3_2:38976358-38976377 | Msa0405080:intron | 40.0% |
| ! | TATCCCGCTATAGCATTTTG+GGG | + | chr3_2:38976359-38976378 | Msa0405080:intron | 40.0% |
| ! | AATAGCTGATGTTTTGCTGG+TGG | + | chr3_2:38976435-38976454 | Msa0405080:intron | 40.0% |
| CAAGTACCCCTACTGAAATT+CGG | + | chr3_2:38976705-38976724 | Msa0405080:CDS | 40.0% | |
| TGCTTTCCGAATTTCAGTAG+GGG | - | chr3_2:38976714-38976733 | None:intergenic | 40.0% | |
| GATGCTTTCCGAATTTCAGT+AGG | - | chr3_2:38976716-38976735 | None:intergenic | 40.0% | |
| CCAGAATCGTTACTACATGA+AGG | - | chr3_2:38976758-38976777 | None:intergenic | 40.0% | |
| CCTTCATGTAGTAACGATTC+TGG | + | chr3_2:38976755-38976774 | Msa0405080:CDS | 40.0% | |
| AGAAGCCAAGAACGAAACTT+TGG | - | chr3_2:38976785-38976804 | None:intergenic | 40.0% | |
| !!! | CATTGTTTTTTGGGAGTTGG+CGG | - | chr3_2:38976854-38976873 | None:intergenic | 40.0% |
| TTAATAACCTGCTAGGTGTG+TGG | - | chr3_2:38976910-38976929 | None:intergenic | 40.0% | |
| AACCACACAATCAATTTCGG+TGG | + | chr3_2:38977009-38977028 | Msa0405080:intron | 40.0% | |
| ATCCACCGAAATTGATTGTG+TGG | - | chr3_2:38977014-38977033 | None:intergenic | 40.0% | |
| ! | CCATTGAGTATTGTGTGCAT+TGG | - | chr3_2:38977308-38977327 | None:intergenic | 40.0% |
| CCAATGCACACAATACTCAA+TGG | + | chr3_2:38977305-38977324 | Msa0405080:CDS | 40.0% | |
| GAATATCATGACTCTTCGGA+AGG | + | chr3_2:38977328-38977347 | Msa0405080:CDS | 40.0% | |
| TTCATTTCAGTTCCATCGGT+CGG | - | chr3_2:38977376-38977395 | None:intergenic | 40.0% | |
| GAACTGAAATGAATAAGGGG+AGG | + | chr3_2:38977383-38977402 | Msa0405080:CDS | 40.0% | |
| ATCTTCATTGGGGTAGGATT+TGG | - | chr3_2:38977499-38977518 | None:intergenic | 40.0% | |
| TCAGATATCTTCATTGGGGT+AGG | - | chr3_2:38977505-38977524 | None:intergenic | 40.0% | |
| ACCCCAATGAAGATATCTGA+AGG | + | chr3_2:38977505-38977524 | Msa0405080:CDS | 40.0% | |
| CCCTTCAGATATCTTCATTG+GGG | - | chr3_2:38977509-38977528 | None:intergenic | 40.0% | |
| CCCCAATGAAGATATCTGAA+GGG | + | chr3_2:38977506-38977525 | Msa0405080:CDS | 40.0% | |
| TTAACAGGGTAAACAGTTCC+AGG | - | chr3_2:38977541-38977560 | None:intergenic | 40.0% | |
| ACACAAACTGGGACTTAACA+GGG | - | chr3_2:38977555-38977574 | None:intergenic | 40.0% | |
| TACACAAACTGGGACTTAAC+AGG | - | chr3_2:38977556-38977575 | None:intergenic | 40.0% | |
| GTGTATCCAAATAACAGCCT+AGG | + | chr3_2:38977571-38977590 | Msa0405080:CDS | 40.0% | |
| ! | CTCTAAGAGCAAGATACTTG+AGG | + | chr3_2:38977603-38977622 | Msa0405080:CDS | 40.0% |
| !! | GAAGCCTGCATCTGTTATTT+TGG | + | chr3_2:38977750-38977769 | Msa0405080:CDS | 40.0% |
| TCCTCCAAAATAACAGATGC+AGG | - | chr3_2:38977757-38977776 | None:intergenic | 40.0% | |
| GGAGGAGAGAAGAAAGAAAA+TGG | + | chr3_2:38977771-38977790 | Msa0405080:CDS | 40.0% | |
| CACATGGAAAATAGCTACCA+AGG | - | chr3_2:38977959-38977978 | None:intergenic | 40.0% | |
| AGGATACTATCATCGCTCAA+AGG | + | chr3_2:38978095-38978114 | Msa0405080:CDS | 40.0% | |
| GCAAACAACAGTGCTTTCAT+AGG | - | chr3_2:38978125-38978144 | None:intergenic | 40.0% | |
| TTCAACGTCATGCTAAACTC+AGG | - | chr3_2:38978276-38978295 | None:intergenic | 40.0% | |
| TTGGTCCCACTAAATCATAC+AGG | + | chr3_2:38978445-38978464 | Msa0405080:intron | 40.0% | |
| TAGATATCAACATGACGCCA+CGG | - | chr3_2:38978606-38978625 | None:intergenic | 40.0% | |
| GTCCATCTCATTACTCTATG+AGG | + | chr3_2:38978634-38978653 | Msa0405080:three_prime_UTR | 40.0% | |
| !! | AATATTGGGCATTGGGAGAT+CGG | + | chr3_2:38978800-38978819 | Msa0405080:three_prime_UTR | 40.0% |
| CTGACCTACCTTCTTCACTT+GGG | + | chr3_2:38971444-38971463 | Msa0405080:five_prime_UTR | 45.0% | |
| CACGGACACTTCTTGGATTA+GGG | + | chr3_2:38971730-38971749 | Msa0405080:intron | 45.0% | |
| ! | ACGGACACTTCTTGGATTAG+GGG | + | chr3_2:38971731-38971750 | Msa0405080:intron | 45.0% |
| CAAAGTCACAGACACTGACA+CGG | - | chr3_2:38971866-38971885 | None:intergenic | 45.0% | |
| !!! | TAAGCTGGATTTTGGGTTGG+TGG | + | chr3_2:38972108-38972127 | Msa0405080:intron | 45.0% |
| !!! | GGATTTTGGGTTGGTGGTAT+TGG | + | chr3_2:38972114-38972133 | Msa0405080:intron | 45.0% |
| GAATGGATCCTAAGACCTTG+AGG | - | chr3_2:38972164-38972183 | None:intergenic | 45.0% | |
| CTAAATTCGGTAGGGGAGAA+TGG | - | chr3_2:38972181-38972200 | None:intergenic | 45.0% | |
| CATTCTCCCCTACCGAATTT+AGG | + | chr3_2:38972179-38972198 | Msa0405080:intron | 45.0% | |
| CAAAGTCACAGACACTGACA+CGG | - | chr3_2:38971866-38971885 | None:intergenic | 45.0% | |
| !!! | TAAGCTGGATTTTGGGTTGG+TGG | + | chr3_2:38972108-38972127 | Msa0405080:intron | 45.0% |
| !!! | GGATTTTGGGTTGGTGGTAT+TGG | + | chr3_2:38972114-38972133 | Msa0405080:intron | 45.0% |
| GAATGGATCCTAAGACCTTG+AGG | - | chr3_2:38972164-38972183 | None:intergenic | 45.0% | |
| GAAGAACCTAAATTCGGACG+GGG | - | chr3_2:38973530-38973549 | None:intergenic | 45.0% | |
| AGGGATCACAGAGTGATGAT+AGG | + | chr3_2:38974700-38974719 | Msa0405080:CDS | 45.0% | |
| TGATAGGCAGCTTAAAGACG+AGG | + | chr3_2:38974716-38974735 | Msa0405080:CDS | 45.0% | |
| ! | ATCTCAAGGTTCTGGCAGTA+GGG | + | chr3_2:38975233-38975252 | Msa0405080:intron | 45.0% |
| GCATTCCTGGCTAAGATTTG+TGG | + | chr3_2:38975356-38975375 | Msa0405080:intron | 45.0% | |
| CTACAAGCATATGCATGTCC+TGG | + | chr3_2:38975416-38975435 | Msa0405080:intron | 45.0% | |
| AGTTAATAGCGGCGCTATAG+CGG | + | chr3_2:38975493-38975512 | Msa0405080:intron | 45.0% | |
| AAAACCGCTATGCAGAGTTG+CGG | - | chr3_2:38975607-38975626 | None:intergenic | 45.0% | |
| GCGCCGTAAAGAATGAAAGA+AGG | - | chr3_2:38975748-38975767 | None:intergenic | 45.0% | |
| GAAGTTACAAACCCGAGGAA+CGG | - | chr3_2:38975884-38975903 | None:intergenic | 45.0% | |
| GTCAAGAAGTTACAAACCCG+AGG | - | chr3_2:38975889-38975908 | None:intergenic | 45.0% | |
| GGAAACAGAGAGCAGAATAG+AGG | - | chr3_2:38976043-38976062 | None:intergenic | 45.0% | |
| GCTCAAAGACATAAACGGAC+CGG | + | chr3_2:38976144-38976163 | Msa0405080:intron | 45.0% | |
| TGTGATAAGGTCAGCAATGG+AGG | + | chr3_2:38976243-38976262 | Msa0405080:intron | 45.0% | |
| ! | GCTATCCCGCTATAGCATTT+TGG | + | chr3_2:38976357-38976376 | Msa0405080:intron | 45.0% |
| ! | ATCCCGCTATAGCATTTTGG+GGG | + | chr3_2:38976360-38976379 | Msa0405080:intron | 45.0% |
| !! | TTCAGTAGGGGTACTTGCTA+TGG | - | chr3_2:38976702-38976721 | None:intergenic | 45.0% |
| GTCCTCCAAAGTTTCGTTCT+TGG | + | chr3_2:38976777-38976796 | Msa0405080:CDS | 45.0% | |
| AGCCAAGAACGAAACTTTGG+AGG | - | chr3_2:38976782-38976801 | None:intergenic | 45.0% | |
| ATGACTCTTCGGAAGGAAGT+GGG | + | chr3_2:38977335-38977354 | Msa0405080:CDS | 45.0% | |
| TCCAAATAACAGCCTAGGTG+AGG | + | chr3_2:38977576-38977595 | Msa0405080:CDS | 45.0% | |
| TCCTCACCTAGGCTGTTATT+TGG | - | chr3_2:38977580-38977599 | None:intergenic | 45.0% | |
| TCTTAGAGACATCCTCACCT+AGG | - | chr3_2:38977591-38977610 | None:intergenic | 45.0% | |
| GAGCAAGATACTTGAGGAAG+AGG | + | chr3_2:38977609-38977628 | Msa0405080:CDS | 45.0% | |
| ATGTTCCTGCGCAAGATTCA+AGG | + | chr3_2:38977635-38977654 | Msa0405080:CDS | 45.0% | |
| ATCTTCCTTGAATCTTGCGC+AGG | - | chr3_2:38977643-38977662 | None:intergenic | 45.0% | |
| AGTGAATCTACCGTGGAAGA+AGG | + | chr3_2:38977712-38977731 | Msa0405080:intron | 45.0% | |
| AGAAGACAAGCCTTCTTCCA+CGG | - | chr3_2:38977725-38977744 | None:intergenic | 45.0% | |
| TGGAAGAAGGCTTGTCTTCT+TGG | + | chr3_2:38977725-38977744 | Msa0405080:intron | 45.0% | |
| !!! | GCCTGCATCTGTTATTTTGG+AGG | + | chr3_2:38977753-38977772 | Msa0405080:CDS | 45.0% |
| TGCTGCACATTGGATTGAAG+AGG | + | chr3_2:38977852-38977871 | Msa0405080:CDS | 45.0% | |
| TTCTCCAACCTCTCTTCGAA+CGG | - | chr3_2:38978064-38978083 | None:intergenic | 45.0% | |
| !! | GTTGGAGAAGGCATTATCTG+AGG | + | chr3_2:38978075-38978094 | Msa0405080:CDS | 45.0% |
| AGCACTGCATTGGGACTTAA+TGG | - | chr3_2:38978682-38978701 | None:intergenic | 45.0% | |
| CAAGCAATCAGCACTGCATT+GGG | - | chr3_2:38978691-38978710 | None:intergenic | 45.0% | |
| CCAAGTGAAGAAGGTAGGTC+AGG | - | chr3_2:38971446-38971465 | None:intergenic | 50.0% | |
| CCTGACCTACCTTCTTCACT+TGG | + | chr3_2:38971443-38971462 | Msa0405080:five_prime_UTR | 50.0% | |
| AGGACCCAAGTGAAGAAGGT+AGG | - | chr3_2:38971451-38971470 | None:intergenic | 50.0% | |
| GAAGAGGACCCAAGTGAAGA+AGG | - | chr3_2:38971455-38971474 | None:intergenic | 50.0% | |
| GCACGGACACTTCTTGGATT+AGG | + | chr3_2:38971729-38971748 | Msa0405080:intron | 50.0% | |
| !! | GATTAGGGGTGTCTCAGTGT+CGG | + | chr3_2:38971745-38971764 | Msa0405080:intron | 50.0% |
| !! | TTGGGTTGGTGGTATTGGCT+TGG | + | chr3_2:38972119-38972138 | Msa0405080:intron | 50.0% |
| !! | TGGGTTGGTGGTATTGGCTT+GGG | + | chr3_2:38972120-38972139 | Msa0405080:intron | 50.0% |
| TGGATCCTAAGACCTTGAGG+AGG | - | chr3_2:38972161-38972180 | None:intergenic | 50.0% | |
| !! | GATTAGGGGTGTCTCAGTGT+CGG | + | chr3_2:38971745-38971764 | Msa0405080:intron | 50.0% |
| !! | TTGGGTTGGTGGTATTGGCT+TGG | + | chr3_2:38972119-38972138 | Msa0405080:intron | 50.0% |
| !! | TGGGTTGGTGGTATTGGCTT+GGG | + | chr3_2:38972120-38972139 | Msa0405080:intron | 50.0% |
| TGGATCCTAAGACCTTGAGG+AGG | - | chr3_2:38972161-38972180 | None:intergenic | 50.0% | |
| CTAAATTCGGACGGGGAGAA+TGG | - | chr3_2:38973523-38973542 | None:intergenic | 50.0% | |
| CATTCTCCCCGTCCGAATTT+AGG | + | chr3_2:38973521-38973540 | Msa0405080:intron | 50.0% | |
| ! | GATCTCAAGGTTCTGGCAGT+AGG | + | chr3_2:38975232-38975251 | Msa0405080:intron | 50.0% |
| TCTTAGCCAGGAATGCACCA+TGG | - | chr3_2:38975352-38975371 | None:intergenic | 50.0% | |
| AAAAGTTTGTGAGCCAGCCC+AGG | - | chr3_2:38975437-38975456 | None:intergenic | 50.0% | |
| TACCGGACCGCTATGCAATA+AGG | + | chr3_2:38975544-38975563 | Msa0405080:intron | 50.0% | |
| ! | TGCCTTATTGCATAGCGGTC+CGG | - | chr3_2:38975549-38975568 | None:intergenic | 50.0% |
| GACCGCTATGCAATAAGGCA+TGG | + | chr3_2:38975549-38975568 | Msa0405080:intron | 50.0% | |
| ! | CGCCATGCCTTATTGCATAG+CGG | - | chr3_2:38975554-38975573 | None:intergenic | 50.0% |
| GGCGTAGCGTTATGAGATAG+CGG | + | chr3_2:38975570-38975589 | Msa0405080:intron | 50.0% | |
| ! | ATGAGATAGCGGCGCAATAG+CGG | + | chr3_2:38975581-38975600 | Msa0405080:intron | 50.0% |
| GACCCCCAAAATGCTATAGC+GGG | - | chr3_2:38976365-38976384 | None:intergenic | 50.0% | |
| CGACCCCCAAAATGCTATAG+CGG | - | chr3_2:38976366-38976385 | None:intergenic | 50.0% | |
| !! | CGCTATAGCATTTTGGGGGT+CGG | + | chr3_2:38976364-38976383 | Msa0405080:intron | 50.0% |
| ! | GCTGATGTTTTGCTGGTGGA+AGG | + | chr3_2:38976439-38976458 | Msa0405080:intron | 50.0% |
| !! | GAGTTGGCGGATTGAATGGT+TGG | - | chr3_2:38976841-38976860 | None:intergenic | 50.0% |
| !! | TTGGGAGTTGGCGGATTGAA+TGG | - | chr3_2:38976845-38976864 | None:intergenic | 50.0% |
| CATGACTCTTCGGAAGGAAG+TGG | + | chr3_2:38977334-38977353 | Msa0405080:CDS | 50.0% | |
| !! | TCCTGTGAGTCATCGGCTTA+TGG | + | chr3_2:38977445-38977464 | Msa0405080:CDS | 50.0% |
| ACCATAAGCCGATGACTCAC+AGG | - | chr3_2:38977449-38977468 | None:intergenic | 50.0% | |
| !! | TGTGAGTCATCGGCTTATGG+TGG | + | chr3_2:38977448-38977467 | Msa0405080:CDS | 50.0% |
| !! | AGTCATCGGCTTATGGTGGA+TGG | + | chr3_2:38977452-38977471 | Msa0405080:CDS | 50.0% |
| TCTGAAGGGATGCAAACTCC+TGG | + | chr3_2:38977520-38977539 | Msa0405080:CDS | 50.0% | |
| ! | CCTATCGACAGGAGTTTTGC+GGG | - | chr3_2:38977815-38977834 | None:intergenic | 50.0% |
| ! | GCCTATCGACAGGAGTTTTG+CGG | - | chr3_2:38977816-38977835 | None:intergenic | 50.0% |
| CTGTCGATAGGCCCATCATT+GGG | + | chr3_2:38977824-38977843 | Msa0405080:CDS | 50.0% | |
| GCAGCAACCATCCCAATGAT+GGG | - | chr3_2:38977838-38977857 | None:intergenic | 50.0% | |
| TGCAGCAACCATCCCAATGA+TGG | - | chr3_2:38977839-38977858 | None:intergenic | 50.0% | |
| TTGGGATGGTTGCTGCACAT+TGG | + | chr3_2:38977842-38977861 | Msa0405080:CDS | 50.0% | |
| TTCAGGACCAGAAAGTGAGC+TGG | + | chr3_2:38978029-38978048 | Msa0405080:intron | 50.0% | |
| TAGCATGCCAGCTCACTTTC+TGG | - | chr3_2:38978039-38978058 | None:intergenic | 50.0% | |
| GTTCGAAGAGAGGTTGGAGA+AGG | + | chr3_2:38978063-38978082 | Msa0405080:CDS | 50.0% | |
| CCAAGCAATCAGCACTGCAT+TGG | - | chr3_2:38978692-38978711 | None:intergenic | 50.0% | |
| !! | CCAATGCAGTGCTGATTGCT+TGG | + | chr3_2:38978689-38978708 | Msa0405080:three_prime_UTR | 50.0% |
| ! | GCTTTGTTGTGGTGCCGAGA+CGG | - | chr3_2:38971637-38971656 | None:intergenic | 55.0% |
| ACACGGCACAGACACTGACA+CGG | - | chr3_2:38971849-38971868 | None:intergenic | 55.0% | |
| !! | GTGGTATTGGCTTGGGACCT+GGG | + | chr3_2:38972127-38972146 | Msa0405080:intron | 55.0% |
| GTGCTCCTCCTCAAGGTCTT+AGG | + | chr3_2:38972153-38972172 | Msa0405080:intron | 55.0% | |
| ! | GCTTTGTTGTGGTGCCGAGA+CGG | - | chr3_2:38971637-38971656 | None:intergenic | 55.0% |
| ACACGGCACAGACACTGACA+CGG | - | chr3_2:38971849-38971868 | None:intergenic | 55.0% | |
| !! | GTGGTATTGGCTTGGGACCT+GGG | + | chr3_2:38972127-38972146 | Msa0405080:intron | 55.0% |
| GTGCTCCTCCTCAAGGTCTT+AGG | + | chr3_2:38972153-38972172 | Msa0405080:intron | 55.0% | |
| GGTTGTCCATGGTGCATTCC+TGG | + | chr3_2:38975343-38975362 | Msa0405080:intron | 55.0% | |
| AGCATATGCATGTCCTGGGC+TGG | + | chr3_2:38975421-38975440 | Msa0405080:intron | 55.0% | |
| GTTACAAACCCGAGGAACGG+TGG | - | chr3_2:38975881-38975900 | None:intergenic | 55.0% | |
| ACAGTCATGGCAGCATCAGC+TGG | + | chr3_2:38976089-38976108 | Msa0405080:intron | 55.0% | |
| GTTCAGACCACACACCTAGC+AGG | + | chr3_2:38976900-38976919 | Msa0405080:CDS | 55.0% | |
| TCTTCGGAAGGAAGTGGGCA+GGG | + | chr3_2:38977340-38977359 | Msa0405080:CDS | 55.0% | |
| CCCGCAAAACTCCTGTCGAT+AGG | + | chr3_2:38977812-38977831 | Msa0405080:CDS | 55.0% | |
| !! | CCAATGATGGGCCTATCGAC+AGG | - | chr3_2:38977826-38977845 | None:intergenic | 55.0% |
| CCTGTCGATAGGCCCATCAT+TGG | + | chr3_2:38977823-38977842 | Msa0405080:CDS | 55.0% | |
| CGATAGGCCCATCATTGGGA+TGG | + | chr3_2:38977828-38977847 | Msa0405080:CDS | 55.0% | |
| CTGATGCTCCTCCTCCTAAG+TGG | + | chr3_2:38977881-38977900 | Msa0405080:CDS | 55.0% | |
| ATGCTCCTCCTCCTAAGTGG+TGG | + | chr3_2:38977884-38977903 | Msa0405080:CDS | 55.0% | |
| TGCTCCTCCTCCTAAGTGGT+GGG | + | chr3_2:38977885-38977904 | Msa0405080:CDS | 55.0% | |
| TTGCCATCCCACCACTTAGG+AGG | - | chr3_2:38977895-38977914 | None:intergenic | 55.0% | |
| CCATTGCCATCCCACCACTT+AGG | - | chr3_2:38977898-38977917 | None:intergenic | 55.0% | |
| ! | CCTAAGTGGTGGGATGGCAA+TGG | + | chr3_2:38977895-38977914 | Msa0405080:CDS | 55.0% |
| ATGCTACGCCGTTCGAAGAG+AGG | + | chr3_2:38978053-38978072 | Msa0405080:CDS | 55.0% | |
| TACGCCGTTCGAAGAGAGGT+TGG | + | chr3_2:38978057-38978076 | Msa0405080:CDS | 55.0% | |
| TTCATCCCATCCACAGTCCG+TGG | + | chr3_2:38978586-38978605 | Msa0405080:CDS | 55.0% | |
| !! | GGTGGTATTGGCTTGGGACC+TGG | + | chr3_2:38972126-38972145 | Msa0405080:intron | 60.0% |
| ! | TTGAGGAGGAGCACACTCCC+AGG | - | chr3_2:38972147-38972166 | None:intergenic | 60.0% |
| ! | TGGGAGTGTGCTCCTCCTCA+AGG | + | chr3_2:38972146-38972165 | Msa0405080:intron | 60.0% |
| ! | GTTGTGGTGCCGAGACGGTA+CGG | - | chr3_2:38972985-38973004 | None:intergenic | 60.0% |
| !! | GGTGGTATTGGCTTGGGACC+TGG | + | chr3_2:38972126-38972145 | Msa0405080:intron | 60.0% |
| ! | TTGAGGAGGAGCACACTCCC+AGG | - | chr3_2:38972147-38972166 | None:intergenic | 60.0% |
| ! | TGGGAGTGTGCTCCTCCTCA+AGG | + | chr3_2:38972146-38972165 | Msa0405080:intron | 60.0% |
| GGCGCTATAGCGGCCAATAG+CGG | + | chr3_2:38975503-38975522 | Msa0405080:intron | 60.0% | |
| ! | AGTGCGACGGCGGCGTTTTA+CGG | - | chr3_2:38975834-38975853 | None:intergenic | 60.0% |
| ! | ACGGTGGCGGTAAGGAACGA+CGG | - | chr3_2:38975865-38975884 | None:intergenic | 60.0% |
| TCCTTACCGCCACCGTTCCT+CGG | + | chr3_2:38975869-38975888 | Msa0405080:intron | 60.0% | |
| ACAAACCCGAGGAACGGTGG+CGG | - | chr3_2:38975878-38975897 | None:intergenic | 60.0% | |
| CTCTTCGGAAGGAAGTGGGC+AGG | + | chr3_2:38977339-38977358 | Msa0405080:CDS | 60.0% | |
| CTTCGGAAGGAAGTGGGCAG+GGG | + | chr3_2:38977341-38977360 | Msa0405080:CDS | 60.0% | |
| GGGAGCTATCATCCGACCGA+TGG | + | chr3_2:38977361-38977380 | Msa0405080:CDS | 60.0% | |
| CCATCCCACCACTTAGGAGG+AGG | - | chr3_2:38977892-38977911 | None:intergenic | 60.0% | |
| ! | CCTCCTCCTAAGTGGTGGGA+TGG | + | chr3_2:38977889-38977908 | Msa0405080:CDS | 60.0% |
| ! | TGACGCCACGGACTGTGGAT+GGG | - | chr3_2:38978594-38978613 | None:intergenic | 60.0% |
| ! | ATGACGCCACGGACTGTGGA+TGG | - | chr3_2:38978595-38978614 | None:intergenic | 60.0% |
| ! | CAACATGACGCCACGGACTG+TGG | - | chr3_2:38978599-38978618 | None:intergenic | 60.0% |
| ! | CAGCGGCGGATTTAGCGTGG+TGG | - | chr3_2:38971600-38971619 | None:intergenic | 65.0% |
| ! | AGGCAGCGGCGGATTTAGCG+TGG | - | chr3_2:38971603-38971622 | None:intergenic | 65.0% |
| ! | GTTGTGGTGCCGAGACGGCA+CGG | - | chr3_2:38971632-38971651 | None:intergenic | 65.0% |
| ! | CAGCGGCGGATTTAGCGTGG+TGG | - | chr3_2:38971600-38971619 | None:intergenic | 65.0% |
| ! | TGGCAGCGGCGGATTTAGCG+TGG | - | chr3_2:38972956-38972975 | None:intergenic | 65.0% |
| GCGGCCGCAACTCTGCATAG+CGG | + | chr3_2:38975600-38975619 | Msa0405080:intron | 65.0% | |
| GACGGCGGATGACAGTGCGA+CGG | - | chr3_2:38975847-38975866 | None:intergenic | 65.0% | |
| GTGGCGGTAAGGAACGACGG+CGG | - | chr3_2:38975862-38975881 | None:intergenic | 65.0% | |
| CCTTACCGCCACCGTTCCTC+GGG | + | chr3_2:38975870-38975889 | Msa0405080:intron | 65.0% | |
| ! | TAGCGGATAGCGGCGCGTAG+CGG | - | chr3_2:38976390-38976409 | None:intergenic | 65.0% |
| ! | GTGGTGCCGAGACGGTACGG+CGG | - | chr3_2:38972982-38973001 | None:intergenic | 70.0% |
| AGCGGCCAATAGCGGCCGCA+CGG | + | chr3_2:38975511-38975530 | Msa0405080:intron | 70.0% | |
| CCAATAGCGGCCGCACGGTG+CGG | + | chr3_2:38975516-38975535 | Msa0405080:intron | 70.0% | |
| GGCGGATGACAGTGCGACGG+CGG | - | chr3_2:38975844-38975863 | None:intergenic | 70.0% | |
| ! | CCCGAGGAACGGTGGCGGTA+AGG | - | chr3_2:38975873-38975892 | None:intergenic | 70.0% |
| ! | GTGGTGCCGAGACGGCACGG+CGG | - | chr3_2:38971629-38971648 | None:intergenic | 75.0% |
| CCACCGCCGCCGTACCGTCT+CGG | + | chr3_2:38972973-38972992 | Msa0405080:intron | 75.0% | |
| GTGCCGAGACGGTACGGCGG+CGG | - | chr3_2:38972979-38972998 | None:intergenic | 75.0% | |
| CCGCACCGTGCGGCCGCTAT+TGG | - | chr3_2:38975519-38975538 | None:intergenic | 75.0% | |
| CGGTACCGCACCGCACCGTG+CGG | - | chr3_2:38975529-38975548 | None:intergenic | 75.0% | |
| CGCACGGTGCGGTGCGGTAC+CGG | + | chr3_2:38975527-38975546 | Msa0405080:intron | 75.0% | |
| ! | CCTCCGCCGCCGTGCCGTCT+CGG | + | chr3_2:38971620-38971639 | Msa0405080:CDS | 80.0% |
| ! | GTGCCGAGACGGCACGGCGG+CGG | - | chr3_2:38971626-38971645 | None:intergenic | 80.0% |
| ! | TACGGCGGCGGTGGCAGCGG+CGG | - | chr3_2:38972967-38972986 | None:intergenic | 80.0% |
| ! | CGGTACGGCGGCGGTGGCAG+CGG | - | chr3_2:38972970-38972989 | None:intergenic | 80.0% |
| ! | CCGAGACGGTACGGCGGCGG+TGG | - | chr3_2:38972976-38972995 | None:intergenic | 80.0% |
| ! | AGCGGCCGCACGGTGCGGTG+CGG | + | chr3_2:38975521-38975540 | Msa0405080:intron | 80.0% |
| ! | CACGGCGGCGGAGGCAGCGG+CGG | - | chr3_2:38971614-38971633 | None:intergenic | 85.0% |
| ! | CGGCACGGCGGCGGAGGCAG+CGG | - | chr3_2:38971617-38971636 | None:intergenic | 85.0% |
| ! | CCGAGACGGCACGGCGGCGG+AGG | - | chr3_2:38971623-38971642 | None:intergenic | 85.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr3_2 | gene | 38971341 | 38978823 | 38971341 | ID=Msa0405080;Name=Msa0405080 |
| chr3_2 | mRNA | 38971341 | 38978823 | 38971341 | ID=Msa0405080-mRNA-1;Parent=Msa0405080;Name=Msa0405080-mRNA-1;_AED=0.05;_eAED=0.05;_QI=140|0.75|0.66|1|0.5|0.66|9|204|454 |
| chr3_2 | exon | 38971341 | 38971660 | 38971341 | ID=Msa0405080-mRNA-1:exon:7667;Parent=Msa0405080-mRNA-1 |
| chr3_2 | exon | 38974500 | 38974548 | 38974500 | ID=Msa0405080-mRNA-1:exon:7668;Parent=Msa0405080-mRNA-1 |
| chr3_2 | exon | 38974658 | 38974737 | 38974658 | ID=Msa0405080-mRNA-1:exon:7669;Parent=Msa0405080-mRNA-1 |
| chr3_2 | exon | 38976674 | 38976921 | 38976674 | ID=Msa0405080-mRNA-1:exon:7670;Parent=Msa0405080-mRNA-1 |
| chr3_2 | exon | 38977297 | 38977475 | 38977297 | ID=Msa0405080-mRNA-1:exon:7671;Parent=Msa0405080-mRNA-1 |
| chr3_2 | exon | 38977491 | 38977712 | 38977491 | ID=Msa0405080-mRNA-1:exon:7672;Parent=Msa0405080-mRNA-1 |
| chr3_2 | exon | 38977734 | 38977948 | 38977734 | ID=Msa0405080-mRNA-1:exon:7673;Parent=Msa0405080-mRNA-1 |
| chr3_2 | exon | 38978034 | 38978116 | 38978034 | ID=Msa0405080-mRNA-1:exon:7674;Parent=Msa0405080-mRNA-1 |
| chr3_2 | exon | 38978511 | 38978823 | 38978511 | ID=Msa0405080-mRNA-1:exon:7675;Parent=Msa0405080-mRNA-1 |
| chr3_2 | five_prime_UTR | 38971341 | 38971480 | 38971341 | ID=Msa0405080-mRNA-1:five_prime_utr;Parent=Msa0405080-mRNA-1 |
| chr3_2 | CDS | 38971481 | 38971660 | 38971481 | ID=Msa0405080-mRNA-1:cds;Parent=Msa0405080-mRNA-1 |
| chr3_2 | CDS | 38974500 | 38974548 | 38974500 | ID=Msa0405080-mRNA-1:cds;Parent=Msa0405080-mRNA-1 |
| chr3_2 | CDS | 38974658 | 38974737 | 38974658 | ID=Msa0405080-mRNA-1:cds;Parent=Msa0405080-mRNA-1 |
| chr3_2 | CDS | 38976674 | 38976921 | 38976674 | ID=Msa0405080-mRNA-1:cds;Parent=Msa0405080-mRNA-1 |
| chr3_2 | CDS | 38977297 | 38977475 | 38977297 | ID=Msa0405080-mRNA-1:cds;Parent=Msa0405080-mRNA-1 |
| chr3_2 | CDS | 38977491 | 38977712 | 38977491 | ID=Msa0405080-mRNA-1:cds;Parent=Msa0405080-mRNA-1 |
| chr3_2 | CDS | 38977734 | 38977948 | 38977734 | ID=Msa0405080-mRNA-1:cds;Parent=Msa0405080-mRNA-1 |
| chr3_2 | CDS | 38978034 | 38978116 | 38978034 | ID=Msa0405080-mRNA-1:cds;Parent=Msa0405080-mRNA-1 |
| chr3_2 | CDS | 38978511 | 38978619 | 38978511 | ID=Msa0405080-mRNA-1:cds;Parent=Msa0405080-mRNA-1 |
| chr3_2 | three_prime_UTR | 38978620 | 38978823 | 38978620 | ID=Msa0405080-mRNA-1:three_prime_utr;Parent=Msa0405080-mRNA-1 |
| Gene Sequence |
| Protein sequence |
