Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0113410 | sp|P49730|RIR2_TOBAC | 85.455 | 330 | 47 | 1 | 1 | 330 | 1 | 329 | 0.0 | 586 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0113410 | A0A072VJ25 | 98.788 | 330 | 4 | 0 | 1 | 330 | 1 | 330 | 0.0 | 677 |
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa0015570 | Msa0113410 | 0.835907 | 1.276399e-56 | -8.615850e-47 |
| Msa0016530 | Msa0113410 | 0.805836 | 1.101195e-49 | -8.615850e-47 |
| Msa0018920 | Msa0113410 | 0.841636 | 4.214124e-58 | -8.615850e-47 |
| Msa0020540 | Msa0113410 | 0.813812 | 2.117998e-51 | -8.615850e-47 |
| Msa0030070 | Msa0113410 | 0.836400 | 9.570614e-57 | -8.615850e-47 |
| Msa0032980 | Msa0113410 | 0.824231 | 9.026986e-54 | -8.615850e-47 |
| Msa0040640 | Msa0113410 | 0.826670 | 2.388556e-54 | -8.615850e-47 |
| Msa0067060 | Msa0113410 | 0.820188 | 7.827757e-53 | -8.615850e-47 |
| Msa0067380 | Msa0113410 | 0.881736 | 1.872487e-70 | -8.615850e-47 |
| Msa0091350 | Msa0113410 | 0.850301 | 1.854856e-60 | -8.615850e-47 |
| Msa0094180 | Msa0113410 | 0.803856 | 2.854350e-49 | -8.615850e-47 |
| Msa0106630 | Msa0113410 | 0.827284 | 1.702978e-54 | -8.615850e-47 |
| Msa0109730 | Msa0113410 | 0.817752 | 2.802305e-52 | -8.615850e-47 |
| Msa0112670 | Msa0113410 | 0.823613 | 1.260419e-53 | -8.615850e-47 |
| Msa0113410 | Msa0125590 | 0.842181 | 3.024810e-58 | -8.615850e-47 |
| Msa0113410 | Msa0127340 | 0.838186 | 3.339985e-57 | -8.615850e-47 |
| Msa0113410 | Msa0127680 | 0.809595 | 1.750650e-50 | -8.615850e-47 |
| Msa0113410 | Msa0140380 | 0.814459 | 1.524569e-51 | -8.615850e-47 |
| Msa0113410 | Msa0141640 | 0.805546 | 1.266910e-49 | -8.615850e-47 |
| Msa0113410 | Msa0153210 | 0.835473 | 1.644336e-56 | -8.615850e-47 |
| Msa0113410 | Msa0156050 | 0.820791 | 5.689483e-53 | -8.615850e-47 |
| Msa0113410 | Msa0156090 | 0.821252 | 4.455818e-53 | -8.615850e-47 |
| Msa0113410 | Msa0158900 | 0.853686 | 2.028088e-61 | -8.615850e-47 |
| Msa0113410 | Msa0165830 | 0.849684 | 2.761336e-60 | -8.615850e-47 |
| Msa0113410 | Msa0170070 | 0.840883 | 6.648100e-58 | -8.615850e-47 |
| Msa0113410 | Msa0184700 | 0.821849 | 3.243647e-53 | -8.615850e-47 |
| Msa0113410 | Msa0186180 | 0.811417 | 7.075923e-51 | -8.615850e-47 |
| Msa0113410 | Msa0204970 | 0.810575 | 1.076489e-50 | -8.615850e-47 |
| Msa0113410 | Msa0225800 | 0.847020 | 1.505508e-59 | -8.615850e-47 |
| Msa0113410 | Msa0249870 | 0.817814 | 2.713309e-52 | -8.615850e-47 |
| Msa0113410 | Msa0260630 | 0.838466 | 2.829100e-57 | -8.615850e-47 |
| Msa0113410 | Msa0281540 | 0.850766 | 1.373491e-60 | -8.615850e-47 |
| Msa0113410 | Msa0320250 | 0.818630 | 1.773212e-52 | -8.615850e-47 |
| Msa0113410 | Msa0320270 | 0.821240 | 4.486331e-53 | -8.615850e-47 |
| Msa0113410 | Msa0320290 | 0.820028 | 8.515536e-53 | -8.615850e-47 |
| Msa0113410 | Msa0320580 | 0.861275 | 1.150068e-63 | -8.615850e-47 |
| Msa0113410 | Msa0341680 | 0.825309 | 5.029555e-54 | -8.615850e-47 |
| Msa0113410 | Msa0344110 | 0.859406 | 4.228547e-63 | -8.615850e-47 |
| Msa0113410 | Msa0364680 | 0.814092 | 1.836946e-51 | -8.615850e-47 |
| Msa0113410 | Msa0373170 | 0.862056 | 6.637617e-64 | -8.615850e-47 |
| Msa0113410 | Msa0382230 | 0.808870 | 2.504200e-50 | -8.615850e-47 |
| Msa0113410 | Msa0383000 | 0.804670 | 1.932077e-49 | -8.615850e-47 |
| Msa0113410 | Msa0405080 | 0.803709 | 3.062929e-49 | -8.615850e-47 |
| Msa0113410 | Msa0412130 | 0.828442 | 8.972253e-55 | -8.615850e-47 |
| Msa0113410 | Msa0415820 | 0.834328 | 3.194097e-56 | -8.615850e-47 |
| Msa0113410 | Msa0416160 | 0.811254 | 7.675313e-51 | -8.615850e-47 |
| Msa0113410 | Msa0420430 | 0.832548 | 8.876655e-56 | -8.615850e-47 |
| Msa0113410 | Msa0420670 | 0.830042 | 3.669659e-55 | -8.615850e-47 |
| Msa0113410 | Msa0421750 | 0.845871 | 3.098630e-59 | -8.615850e-47 |
| Msa0113410 | Msa0432690 | 0.838083 | 3.550627e-57 | -8.615850e-47 |
| Msa0113410 | Msa0433760 | 0.846532 | 2.047135e-59 | -8.615850e-47 |
| Msa0113410 | Msa0456670 | 0.829608 | 4.679803e-55 | -8.615850e-47 |
| Msa0113410 | Msa0461550 | 0.858542 | 7.668136e-63 | -8.615850e-47 |
| Msa0113410 | Msa0466520 | 0.872953 | 2.139632e-67 | -8.615850e-47 |
| Msa0113410 | Msa0467690 | 0.859143 | 5.070928e-63 | -8.615850e-47 |
| Msa0113410 | Msa0477630 | 0.834007 | 3.843287e-56 | -8.615850e-47 |
| Msa0113410 | Msa0478140 | 0.814383 | 1.584160e-51 | -8.615850e-47 |
| Msa0113410 | Msa0478200 | 0.814031 | 1.895290e-51 | -8.615850e-47 |
| Msa0113410 | Msa0503990 | 0.860730 | 1.684783e-63 | -8.615850e-47 |
| Msa0113410 | Msa0506880 | 0.849404 | 3.303960e-60 | -8.615850e-47 |
| Msa0113410 | Msa0507810 | 0.870857 | 1.062768e-66 | -8.615850e-47 |
| Msa0113410 | Msa0507820 | 0.859560 | 3.801444e-63 | -8.615850e-47 |
| Msa0113410 | Msa0507920 | 0.874908 | 4.675900e-68 | -8.615850e-47 |
| Msa0113410 | Msa0512530 | 0.818190 | 2.231077e-52 | -8.615850e-47 |
| Msa0113410 | Msa0513080 | 0.856727 | 2.645185e-62 | -8.615850e-47 |
| Msa0113410 | Msa0513560 | 0.808015 | 3.811611e-50 | -8.615850e-47 |
| Msa0113410 | Msa0514020 | 0.840905 | 6.560999e-58 | -8.615850e-47 |
| Msa0113410 | Msa0520680 | 0.813984 | 1.940795e-51 | -8.615850e-47 |
| Msa0113410 | Msa0520870 | 0.801317 | 9.531354e-49 | -8.615850e-47 |
| Msa0113410 | Msa0521320 | 0.840486 | 8.448929e-58 | -8.615850e-47 |
| Msa0113410 | Msa0521680 | 0.845314 | 4.388157e-59 | -8.615850e-47 |
| Msa0113410 | Msa0524430 | 0.805804 | 1.118240e-49 | -8.615850e-47 |
| Msa0113410 | Msa0527850 | 0.864275 | 1.366809e-64 | -8.615850e-47 |
| Msa0113410 | Msa0541740 | 0.846146 | 2.608207e-59 | -8.615850e-47 |
| Msa0113410 | Msa0544410 | 0.828755 | 7.535268e-55 | -8.615850e-47 |
| Msa0113410 | Msa0548000 | 0.840000 | 1.131804e-57 | -8.615850e-47 |
| Msa0113410 | Msa0550590 | 0.811592 | 6.483265e-51 | -8.615850e-47 |
| Msa0113410 | Msa0553210 | 0.806626 | 7.506988e-50 | -8.615850e-47 |
| Msa0113410 | Msa0554300 | 0.854693 | 1.038324e-61 | -8.615850e-47 |
| Msa0113410 | Msa0557850 | 0.839420 | 1.601506e-57 | -8.615850e-47 |
| Msa0113410 | Msa0559100 | 0.804592 | 2.005998e-49 | -8.615850e-47 |
| Msa0113410 | Msa0561560 | 0.840213 | 9.955636e-58 | -8.615850e-47 |
| Msa0113410 | Msa0563900 | 0.828773 | 7.462070e-55 | -8.615850e-47 |
| Msa0113410 | Msa0563980 | 0.805859 | 1.089210e-49 | -8.615850e-47 |
| Msa0113410 | Msa0564980 | 0.862417 | 5.142089e-64 | -8.615850e-47 |
| Msa0113410 | Msa0568710 | 0.842792 | 2.082871e-58 | -8.615850e-47 |
| Msa0113410 | Msa0568900 | 0.805612 | 1.227315e-49 | -8.615850e-47 |
| Msa0113410 | Msa0569530 | 0.814873 | 1.234205e-51 | -8.615850e-47 |
| Msa0113410 | Msa0572830 | 0.822484 | 2.311011e-53 | -8.615850e-47 |
| Msa0113410 | Msa0575710 | 0.837475 | 5.086267e-57 | -8.615850e-47 |
| Msa0113410 | Msa0582460 | 0.864324 | 1.319915e-64 | -8.615850e-47 |
| Msa0113410 | Msa0586200 | 0.863036 | 3.313953e-64 | -8.615850e-47 |
| Msa0113410 | Msa0608350 | 0.861532 | 9.602071e-64 | -8.615850e-47 |
| Msa0113410 | Msa0612410 | 0.821719 | 3.477321e-53 | -8.615850e-47 |
| Msa0113410 | Msa0612520 | 0.831008 | 2.129046e-55 | -8.615850e-47 |
| Msa0113410 | Msa0613630 | 0.815106 | 1.095616e-51 | -8.615850e-47 |
| Msa0113410 | Msa0620500 | 0.831473 | 1.636158e-55 | -8.615850e-47 |
| Msa0113410 | Msa0625620 | 0.845725 | 3.394855e-59 | -8.615850e-47 |
| Msa0113410 | Msa0640800 | 0.832381 | 9.764601e-56 | -8.615850e-47 |
| Msa0113410 | Msa0645340 | 0.845064 | 5.126051e-59 | -8.615850e-47 |
| Msa0113410 | Msa0647050 | 0.808315 | 3.289641e-50 | -8.615850e-47 |
| Msa0113410 | Msa0647440 | 0.836833 | 7.422283e-57 | -8.615850e-47 |
| Msa0113410 | Msa0648760 | 0.871552 | 6.263103e-67 | -8.615850e-47 |
| Msa0113410 | Msa0653160 | 0.834213 | 3.412289e-56 | -8.615850e-47 |
| Msa0113410 | Msa0654740 | 0.825040 | 5.821550e-54 | -8.615850e-47 |
| Msa0113410 | Msa0657210 | 0.827618 | 1.416471e-54 | -8.615850e-47 |
| Msa0113410 | Msa0663290 | 0.835287 | 1.831903e-56 | -8.615850e-47 |
| Msa0113410 | Msa0664070 | 0.836526 | 8.887648e-57 | -8.615850e-47 |
| Msa0113410 | Msa0668900 | 0.821963 | 3.053481e-53 | -8.615850e-47 |
| Msa0113410 | Msa0687090 | 0.801338 | 9.439967e-49 | -8.615850e-47 |
| Msa0113410 | Msa0688620 | 0.867696 | 1.131180e-65 | -8.615850e-47 |
| Msa0113410 | Msa0690320 | 0.855466 | 6.191506e-62 | -8.615850e-47 |
| Msa0113410 | Msa0691270 | 0.866886 | 2.053974e-65 | -8.615850e-47 |
| Msa0113410 | Msa0695560 | 0.816367 | 5.737004e-52 | -8.615850e-47 |
| Msa0113410 | Msa0700500 | 0.834052 | 3.744834e-56 | -8.615850e-47 |
| Msa0113410 | Msa0701250 | 0.843168 | 1.654405e-58 | -8.615850e-47 |
| Msa0113410 | Msa0717900 | 0.831832 | 1.334938e-55 | -8.615850e-47 |
| Msa0113410 | Msa0718040 | 0.812101 | 5.022404e-51 | -8.615850e-47 |
| Msa0113410 | Msa0720280 | 0.838279 | 3.159921e-57 | -8.615850e-47 |
| Msa0113410 | Msa0737130 | 0.821254 | 4.451583e-53 | -8.615850e-47 |
| Msa0113410 | Msa0749190 | 0.867024 | 1.855748e-65 | -8.615850e-47 |
| Msa0113410 | Msa0750520 | 0.866284 | 3.190335e-65 | -8.615850e-47 |
| Msa0113410 | Msa0778600 | 0.806052 | 9.921601e-50 | -8.615850e-47 |
| Msa0113410 | Msa0800660 | 0.808356 | 3.223801e-50 | -8.615850e-47 |
| Msa0113410 | Msa0803140 | 0.838904 | 2.179521e-57 | -8.615850e-47 |
| Msa0113410 | Msa0816080 | 0.836372 | 9.727679e-57 | -8.615850e-47 |
| Msa0113410 | Msa0817360 | 0.806432 | 8.250702e-50 | -8.615850e-47 |
| Msa0113410 | Msa0837680 | 0.807128 | 5.881371e-50 | -8.615850e-47 |
| Msa0113410 | Msa0841500 | 0.849520 | 3.068141e-60 | -8.615850e-47 |
| Msa0113410 | Msa0866530 | 0.808733 | 2.679237e-50 | -8.615850e-47 |
| Msa0113410 | Msa0897790 | 0.808289 | 3.332534e-50 | -8.615850e-47 |
| Msa0113410 | Msa0900090 | 0.849270 | 3.601246e-60 | -8.615850e-47 |
| Msa0113410 | Msa0900760 | 0.804370 | 2.231924e-49 | -8.615850e-47 |
| Msa0113410 | Msa0909760 | 0.808388 | 3.174663e-50 | -8.615850e-47 |
| Msa0113410 | Msa0924430 | 0.834370 | 3.116547e-56 | -8.615850e-47 |
| Msa0113410 | Msa0965470 | 0.841645 | 4.190008e-58 | -8.615850e-47 |
| Msa0113410 | Msa0978980 | 0.810776 | 9.741910e-51 | -8.615850e-47 |
| Msa0113410 | Msa0999950 | 0.801146 | 1.033204e-48 | -8.615850e-47 |
| Msa0113410 | Msa1008670 | 0.830224 | 3.312134e-55 | -8.615850e-47 |
| Msa0113410 | Msa1008680 | 0.804520 | 2.076387e-49 | -8.615850e-47 |
| Msa0113410 | Msa1008850 | 0.804568 | 2.029522e-49 | -8.615850e-47 |
| Msa0113410 | Msa1034960 | 0.801726 | 7.860555e-49 | -8.615850e-47 |
| Msa0113410 | Msa1060900 | 0.840363 | 9.098158e-58 | -8.615850e-47 |
| Msa0113410 | Msa1071410 | 0.865736 | 4.755467e-65 | -8.615850e-47 |
| Msa0113410 | Msa1076020 | 0.817215 | 3.701661e-52 | -8.615850e-47 |
| Msa0113410 | Msa1078860 | 0.818633 | 1.770153e-52 | -8.615850e-47 |
| Msa0113410 | Msa1078990 | 0.821107 | 4.813440e-53 | -8.615850e-47 |
| Msa0113410 | Msa1079640 | 0.840488 | 8.439120e-58 | -8.615850e-47 |
| Msa0113410 | Msa1082380 | 0.847647 | 1.012933e-59 | -8.615850e-47 |
| Msa0113410 | Msa1106220 | 0.852905 | 3.397033e-61 | -8.615850e-47 |
| Msa0113410 | Msa1116740 | 0.805602 | 1.233454e-49 | -8.615850e-47 |
| Msa0113410 | Msa1119380 | 0.813863 | 2.063790e-51 | -8.615850e-47 |
| Msa0113410 | Msa1124470 | 0.805153 | 1.531411e-49 | -8.615850e-47 |
| Msa0113410 | Msa1127280 | 0.816852 | 4.467150e-52 | -8.615850e-47 |
| Msa0113410 | Msa1139050 | 0.816174 | 6.335734e-52 | -8.615850e-47 |
| Msa0113410 | Msa1148630 | 0.829417 | 5.208918e-55 | -8.615850e-47 |
| Msa0113410 | Msa1149450 | 0.832524 | 8.999929e-56 | -8.615850e-47 |
| Msa0113410 | Msa1162880 | 0.827322 | 1.667478e-54 | -8.615850e-47 |
| Msa0113410 | Msa1163180 | 0.813624 | 2.329840e-51 | -8.615850e-47 |
| Msa0113410 | Msa1165480 | 0.824815 | 6.578752e-54 | -8.615850e-47 |
| Msa0113410 | Msa1166820 | 0.809067 | 2.272760e-50 | -8.615850e-47 |
| Msa0113410 | Msa1169170 | 0.830765 | 2.443006e-55 | -8.615850e-47 |
| Msa0113410 | Msa1169690 | 0.807126 | 5.885001e-50 | -8.615850e-47 |
| Msa0113410 | Msa1180700 | 0.809508 | 1.828104e-50 | -8.615850e-47 |
| Msa0113410 | Msa1188790 | 0.810040 | 1.404387e-50 | -8.615850e-47 |
| Msa0113410 | Msa1191000 | 0.836683 | 8.105437e-57 | -8.615850e-47 |
| Msa0113410 | Msa1213830 | 0.802591 | 5.216859e-49 | -8.615850e-47 |
| Msa0113410 | Msa1215980 | 0.833640 | 4.748202e-56 | -8.615850e-47 |
| Msa0113410 | Msa1223390 | 0.821274 | 4.406185e-53 | -8.615850e-47 |
| Msa0113410 | Msa1231780 | 0.807297 | 5.413519e-50 | -8.615850e-47 |
| Msa0113410 | Msa1254420 | 0.846668 | 1.879066e-59 | -8.615850e-47 |
| Msa0113410 | Msa1254540 | 0.833107 | 6.447758e-56 | -8.615850e-47 |
| Msa0113410 | Msa1261050 | 0.802242 | 6.156853e-49 | -8.615850e-47 |
| Msa0113410 | Msa1262570 | 0.807526 | 4.840870e-50 | -8.615850e-47 |
| Msa0113410 | Msa1263740 | 0.819943 | 8.905539e-53 | -8.615850e-47 |
| Msa0113410 | Msa1267930 | 0.843299 | 1.526404e-58 | -8.615850e-47 |
| Msa0113410 | Msa1294460 | 0.823101 | 1.659958e-53 | -8.615850e-47 |
| Msa0113410 | Msa1294790 | 0.843512 | 1.338634e-58 | -8.615850e-47 |
| Msa0113410 | Msa1297070 | 0.815875 | 7.387589e-52 | -8.615850e-47 |
| Msa0113410 | Msa1300460 | 0.821802 | 3.327037e-53 | -8.615850e-47 |
| Msa0113410 | Msa1305780 | 0.801268 | 9.757474e-49 | -8.615850e-47 |
| Msa0113410 | Msa1305920 | 0.824085 | 9.771400e-54 | -8.615850e-47 |
| Msa0113410 | Msa1332950 | 0.811220 | 7.804848e-51 | -8.615850e-47 |
| Msa0113410 | Msa1342810 | 0.838798 | 2.321977e-57 | -8.615850e-47 |
| Msa0113410 | Msa1361930 | 0.845835 | 3.170210e-59 | -8.615850e-47 |
| Msa0113410 | Msa1364410 | 0.804361 | 2.240983e-49 | -8.615850e-47 |
| Msa0113410 | Msa1381470 | 0.830267 | 3.233128e-55 | -8.615850e-47 |
| Msa0113410 | Msa1381800 | 0.867658 | 1.163189e-65 | -8.615850e-47 |
| Msa0113410 | Msa1387500 | 0.804193 | 2.429021e-49 | -8.615850e-47 |
| Msa0113410 | Msa1389820 | 0.805321 | 1.412585e-49 | -8.615850e-47 |
| Msa0113410 | Msa1390210 | 0.815897 | 7.304269e-52 | -8.615850e-47 |
| Msa0113410 | Msa1393560 | 0.808251 | 3.394891e-50 | -8.615850e-47 |
| Msa0113410 | Msa1406720 | 0.859397 | 4.255842e-63 | -8.615850e-47 |
| Msa0113410 | Msa1410190 | 0.815785 | 7.738326e-52 | -8.615850e-47 |
| Msa0113410 | Msa1424370 | 0.815263 | 1.011271e-51 | -8.615850e-47 |
| Msa0113410 | Msa1428000 | 0.802361 | 5.818036e-49 | -8.615850e-47 |
| Msa0113410 | Msa1432060 | 0.812572 | 3.963281e-51 | -8.615850e-47 |
| Msa0113410 | Msa1434640 | 0.832171 | 1.100974e-55 | -8.615850e-47 |
| Msa0113410 | Msa1435100 | 0.801286 | 9.672430e-49 | -8.615850e-47 |
| Msa0113410 | Msa1439730 | 0.805474 | 1.311791e-49 | -8.615850e-47 |
| Msa0113410 | Msa1442260 | 0.813973 | 1.951862e-51 | -8.615850e-47 |
| Msa0113410 | Msa1457840 | 0.831642 | 1.486713e-55 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0113410 | MtrunA17_Chr1g0171221 | 98.788 | 330 | 4 | 0 | 1 | 330 | 1 | 330 | 0.0 | 677 |
| Msa0113410 | MtrunA17_Chr7g0225281 | 97.879 | 330 | 7 | 0 | 1 | 330 | 1 | 330 | 0.0 | 671 |
| Msa0113410 | MtrunA17_Chr7g0225401 | 97.879 | 330 | 7 | 0 | 1 | 330 | 1 | 330 | 0.0 | 671 |
| Msa0113410 | MtrunA17_Chr8g0362581 | 93.333 | 330 | 17 | 1 | 1 | 330 | 1 | 325 | 0.0 | 635 |
| Msa0113410 | MtrunA17_Chr4g0065771 | 76.923 | 325 | 74 | 1 | 6 | 330 | 18 | 341 | 0.0 | 533 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0113410 | AT3G27060.1 | 83.735 | 332 | 52 | 2 | 1 | 330 | 1 | 332 | 0.0 | 558 |
| Msa0113410 | AT3G23580.1 | 76.308 | 325 | 76 | 1 | 6 | 330 | 18 | 341 | 0.0 | 518 |
Find 62 sgRNAs with CRISPR-Local
Find 172 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| TGCAGAATCGGTCTGGGTTT+GGG | 0.237047 | 1_3:+29414767 | None:intergenic |
| AGGCACGTGCTTCGGAGATT+TGG | 0.292113 | 1_3:+29414530 | None:intergenic |
| TGCGCATTGGTTGGGATGAA+TGG | 0.293239 | 1_3:-29414064 | Msa0113410:CDS |
| GATGGAATTGATTTCGCTTC+AGG | 0.300115 | 1_3:-29413945 | Msa0113410:CDS |
| CGCTTCCTTGCGCATTGGTT+GGG | 0.302060 | 1_3:-29414072 | Msa0113410:CDS |
| GTTTGTTGCTGATAGGTTAT+TGG | 0.303774 | 1_3:-29414017 | Msa0113410:CDS |
| GGGGCAAGAAGGGGTTCTTC+TGG | 0.330658 | 1_3:+29414787 | None:intergenic |
| TGCGATCTGGAAACCATAAA+AGG | 0.336916 | 1_3:+29414510 | None:intergenic |
| ATGCAGAATCGGTCTGGGTT+TGG | 0.338926 | 1_3:+29414766 | None:intergenic |
| GCGCATTGGTTGGGATGAAT+GGG | 0.350139 | 1_3:-29414063 | Msa0113410:CDS |
| AAGCTGATTGGGCGATGAAA+TGG | 0.358474 | 1_3:-29414372 | Msa0113410:CDS |
| ACAATTTCTTTCACGCGCTC+TGG | 0.374811 | 1_3:+29414136 | None:intergenic |
| ACCATAAAAGGCACGTGCTT+CGG | 0.379129 | 1_3:+29414522 | None:intergenic |
| TTTGTTGCTGATAGGTTATT+GGG | 0.379609 | 1_3:-29414016 | Msa0113410:CDS |
| ATGTTCAGAATCCGTTTGAT+TGG | 0.390491 | 1_3:-29413967 | Msa0113410:CDS |
| GTCTGGGTTTGGGGCAAGAA+GGG | 0.415976 | 1_3:+29414777 | None:intergenic |
| GGGAACATGCAGAATCGGTC+TGG | 0.418807 | 1_3:+29414760 | None:intergenic |
| GTTGCATTTGCTTGTGTTGA+AGG | 0.421118 | 1_3:-29414316 | Msa0113410:CDS |
| GCGCTTCCTTGCGCATTGGT+TGG | 0.429604 | 1_3:-29414073 | Msa0113410:CDS |
| TCAGAATCCGTTTGATTGGA+TGG | 0.443597 | 1_3:-29413963 | Msa0113410:CDS |
| TCTGGGTTTGGGGCAAGAAG+GGG | 0.444554 | 1_3:+29414778 | None:intergenic |
| TCAGTTATGAATAGCTTGAA+TGG | 0.445553 | 1_3:-29413875 | Msa0113410:CDS |
| GCCGTCAGAGGCGGCGAAGA+AGG | 0.447235 | 1_3:+29414594 | None:intergenic |
| GACTTCTTTCATGAATCTAC+CGG | 0.461141 | 1_3:+29414552 | None:intergenic |
| AATCGCTTATATACGTTTCG+AGG | 0.468396 | 1_3:+29414452 | None:intergenic |
| GGCGGTCCAGAATGAGGCTT+CGG | 0.476778 | 1_3:+29414699 | None:intergenic |
| ATCAATTCCATCCAATCAAA+CGG | 0.480364 | 1_3:+29413956 | None:intergenic |
| CGACGCGCTTCCTTGCGCAT+TGG | 0.483293 | 1_3:-29414077 | Msa0113410:CDS |
| GAGCTTATTTCACGTGATGA+AGG | 0.484978 | 1_3:-29414214 | Msa0113410:CDS |
| GATAGGTTATTGGGTGAGCT+TGG | 0.486660 | 1_3:-29414007 | Msa0113410:CDS |
| GGAACATGCAGAATCGGTCT+GGG | 0.489835 | 1_3:+29414761 | None:intergenic |
| CGCATTGGTTGGGATGAATG+GGG | 0.491773 | 1_3:-29414062 | Msa0113410:CDS |
| ATATTGAGTTTGTTGCTGAT+AGG | 0.493329 | 1_3:-29414024 | Msa0113410:CDS |
| ATGGAATTGATTTCGCTTCA+GGG | 0.495575 | 1_3:-29413944 | Msa0113410:CDS |
| GCCTTCTTCGCCGCCTCTGA+CGG | 0.496560 | 1_3:-29414595 | Msa0113410:CDS |
| GGAGGAAAGATCGACTTCTT+CGG | 0.499480 | 1_3:+29414678 | None:intergenic |
| GTGATGCTGTTGAAATTGAA+AGG | 0.499878 | 1_3:-29414111 | Msa0113410:CDS |
| AGGGGTTCTTCTGGAAAAGC+AGG | 0.505225 | 1_3:+29414796 | None:intergenic |
| GGGTGAGCTTGGTTGTGAAA+AGG | 0.505349 | 1_3:-29413996 | Msa0113410:CDS |
| GGTCTGGGTTTGGGGCAAGA+AGG | 0.509820 | 1_3:+29414776 | None:intergenic |
| GGATTGGGAACATGCAGAAT+CGG | 0.521690 | 1_3:+29414755 | None:intergenic |
| TTCTTCGGCGGTCCAGAATG+AGG | 0.524296 | 1_3:+29414693 | None:intergenic |
| GCAGAATCGGTCTGGGTTTG+GGG | 0.524980 | 1_3:+29414768 | None:intergenic |
| TGAAATAAGCTCGTTTGAGA+AGG | 0.538441 | 1_3:+29414225 | None:intergenic |
| TGATGCTGTTGAAATTGAAA+GGG | 0.545948 | 1_3:-29414110 | Msa0113410:CDS |
| ATGAATAGCTTGAATGGTAA+TGG | 0.550185 | 1_3:-29413869 | Msa0113410:CDS |
| ATTCTGCCAGTGCTTGAGAT+CGG | 0.554476 | 1_3:+29414657 | None:intergenic |
| TTTCCTCCGATCTCAAGCAC+TGG | 0.568388 | 1_3:-29414663 | Msa0113410:CDS |
| CGAGGACGTGAGAGATGAAG+TGG | 0.584744 | 1_3:+29414617 | None:intergenic |
| TCGTTTGAGAAGGTTAATCC+CGG | 0.587906 | 1_3:+29414235 | None:intergenic |
| CAGAGGCGGCGAAGAAGGCG+AGG | 0.590500 | 1_3:+29414599 | None:intergenic |
| TGGAATTGATTTCGCTTCAG+GGG | 0.591747 | 1_3:-29413943 | Msa0113410:CDS |
| GCATTGGTTGGGATGAATGG+GGG | 0.596821 | 1_3:-29414061 | Msa0113410:CDS |
| TTCATCCCAACCAATGCGCA+AGG | 0.604485 | 1_3:+29414067 | None:intergenic |
| GATGAAGTGGCGTTCGCCGT+CGG | 0.605168 | 1_3:+29414630 | None:intergenic |
| TTCGAGGACGATGCCGTCAG+AGG | 0.611655 | 1_3:+29414582 | None:intergenic |
| GAGGACGATGCCGTCAGAGG+CGG | 0.612579 | 1_3:+29414585 | None:intergenic |
| CTGCCAGTGCTTGAGATCGG+AGG | 0.635496 | 1_3:+29414660 | None:intergenic |
| ATCGTCCTCGAAAATCTCGC+CGG | 0.639774 | 1_3:-29414571 | Msa0113410:CDS |
| CACTGGCAGAATCTAACCGA+CGG | 0.668443 | 1_3:-29414646 | Msa0113410:CDS |
| GGAAAGATCGACTTCTTCGG+CGG | 0.687608 | 1_3:+29414681 | None:intergenic |
| GAAGAGAATACATCTCAGAG+TGG | 0.694344 | 1_3:+29414476 | None:intergenic |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !!! | AGATTTTTGGGTATTGGATT+GGG | + | chr1_3:29413891-29413910 | None:intergenic | 30.0% |
| AATCCAATACCCAAAAATCT+GGG | - | chr1_3:29413891-29413910 | Msa0113410:CDS | 30.0% | |
| ! | TGTACATTTCCCAGATTTTT+GGG | + | chr1_3:29413903-29413922 | None:intergenic | 30.0% |
| ! | TTGTACATTTCCCAGATTTT+TGG | + | chr1_3:29413904-29413923 | None:intergenic | 30.0% |
| TATCGCAAAAAAAGCTGATT+GGG | - | chr1_3:29414245-29414264 | Msa0113410:CDS | 30.0% | |
| !!! | ATTTTCTGGTTGAAAAAACG+TGG | - | chr1_3:29414363-29414382 | Msa0113410:CDS | 30.0% |
| TGATGCTGTTGAAATTGAAA+GGG | - | chr1_3:29414518-29414537 | Msa0113410:CDS | 30.0% | |
| !! | ATATTGAGTTTGTTGCTGAT+AGG | - | chr1_3:29414604-29414623 | Msa0113410:CDS | 30.0% |
| TTTGTTGCTGATAGGTTATT+GGG | - | chr1_3:29414612-29414631 | Msa0113410:CDS | 30.0% | |
| ATCAATTCCATCCAATCAAA+CGG | + | chr1_3:29414675-29414694 | None:intergenic | 30.0% | |
| AACACGCTTCTCAAAAAAAT+TGG | + | chr1_3:29414715-29414734 | None:intergenic | 30.0% | |
| !!! | AATTTTTTTGAGAAGCGTGT+TGG | - | chr1_3:29414714-29414733 | Msa0113410:CDS | 30.0% |
| !!! | ATTTTTTTGAGAAGCGTGTT+GGG | - | chr1_3:29414715-29414734 | Msa0113410:CDS | 30.0% |
| TCAGTTATGAATAGCTTGAA+TGG | - | chr1_3:29414753-29414772 | Msa0113410:CDS | 30.0% | |
| ATGAATAGCTTGAATGGTAA+TGG | - | chr1_3:29414759-29414778 | Msa0113410:CDS | 30.0% | |
| !!! | AGATTTTTGGGTATTGGATT+GGG | + | chr1_3:29413891-29413910 | None:intergenic | 30.0% |
| AATCCAATACCCAAAAATCT+GGG | - | chr1_3:29413891-29413910 | Msa0113410:CDS | 30.0% | |
| ! | TGTACATTTCCCAGATTTTT+GGG | + | chr1_3:29413903-29413922 | None:intergenic | 30.0% |
| ! | TTGTACATTTCCCAGATTTT+TGG | + | chr1_3:29413904-29413923 | None:intergenic | 30.0% |
| TATCGCAAAAAAAGCTGATT+GGG | - | chr1_3:29414245-29414264 | Msa0113410:CDS | 30.0% | |
| !!! | ATTTTCTGGTTGAAAAAACG+TGG | - | chr1_3:29414363-29414382 | Msa0113410:CDS | 30.0% |
| TGATGCTGTTGAAATTGAAA+GGG | - | chr1_3:29414518-29414537 | Msa0113410:CDS | 30.0% | |
| !! | ATATTGAGTTTGTTGCTGAT+AGG | - | chr1_3:29414604-29414623 | Msa0113410:CDS | 30.0% |
| TTTGTTGCTGATAGGTTATT+GGG | - | chr1_3:29414612-29414631 | Msa0113410:CDS | 30.0% | |
| ATCAATTCCATCCAATCAAA+CGG | + | chr1_3:29414675-29414694 | None:intergenic | 30.0% | |
| AACACGCTTCTCAAAAAAAT+TGG | + | chr1_3:29414715-29414734 | None:intergenic | 30.0% | |
| !!! | AATTTTTTTGAGAAGCGTGT+TGG | - | chr1_3:29414714-29414733 | Msa0113410:CDS | 30.0% |
| !!! | ATTTTTTTGAGAAGCGTGTT+GGG | - | chr1_3:29414715-29414734 | Msa0113410:CDS | 30.0% |
| TCAGTTATGAATAGCTTGAA+TGG | - | chr1_3:29414753-29414772 | Msa0113410:CDS | 30.0% | |
| ATGAATAGCTTGAATGGTAA+TGG | - | chr1_3:29414759-29414778 | Msa0113410:CDS | 30.0% | |
| !!! | CAGATTTTTGGGTATTGGAT+TGG | + | chr1_3:29413892-29413911 | None:intergenic | 35.0% |
| CAATCCAATACCCAAAAATC+TGG | - | chr1_3:29413890-29413909 | Msa0113410:CDS | 35.0% | |
| !!! | TTTCCCAGATTTTTGGGTAT+TGG | + | chr1_3:29413897-29413916 | None:intergenic | 35.0% |
| GACTTCTTTCATGAATCTAC+CGG | + | chr1_3:29414079-29414098 | None:intergenic | 35.0% | |
| AATCGCTTATATACGTTTCG+AGG | + | chr1_3:29414179-29414198 | None:intergenic | 35.0% | |
| !!! | TCAGCTTTTTTTGCGATACA+TGG | + | chr1_3:29414243-29414262 | None:intergenic | 35.0% |
| GTATCGCAAAAAAAGCTGAT+TGG | - | chr1_3:29414244-29414263 | Msa0113410:CDS | 35.0% | |
| GAAAAAACGTGGTTTAATGC+CGG | - | chr1_3:29414374-29414393 | Msa0113410:CDS | 35.0% | |
| AAAAAACGTGGTTTAATGCC+GGG | - | chr1_3:29414375-29414394 | Msa0113410:CDS | 35.0% | |
| TGAAATAAGCTCGTTTGAGA+AGG | + | chr1_3:29414406-29414425 | None:intergenic | 35.0% | |
| GTGATGCTGTTGAAATTGAA+AGG | - | chr1_3:29414517-29414536 | Msa0113410:CDS | 35.0% | |
| ! | GTTTGTTGCTGATAGGTTAT+TGG | - | chr1_3:29414611-29414630 | Msa0113410:CDS | 35.0% |
| ATGTTCAGAATCCGTTTGAT+TGG | - | chr1_3:29414661-29414680 | Msa0113410:CDS | 35.0% | |
| ! | ATGGAATTGATTTCGCTTCA+GGG | - | chr1_3:29414684-29414703 | Msa0113410:CDS | 35.0% |
| !!! | TTTTTTTGAGAAGCGTGTTG+GGG | - | chr1_3:29414716-29414735 | Msa0113410:CDS | 35.0% |
| !!! | TGCTGATTTTTGCTTCAAGT+TGG | - | chr1_3:29414785-29414804 | Msa0113410:CDS | 35.0% |
| !!! | CAGATTTTTGGGTATTGGAT+TGG | + | chr1_3:29413892-29413911 | None:intergenic | 35.0% |
| CAATCCAATACCCAAAAATC+TGG | - | chr1_3:29413890-29413909 | Msa0113410:CDS | 35.0% | |
| !!! | TTTCCCAGATTTTTGGGTAT+TGG | + | chr1_3:29413897-29413916 | None:intergenic | 35.0% |
| GACTTCTTTCATGAATCTAC+CGG | + | chr1_3:29414079-29414098 | None:intergenic | 35.0% | |
| AATCGCTTATATACGTTTCG+AGG | + | chr1_3:29414179-29414198 | None:intergenic | 35.0% | |
| !!! | TCAGCTTTTTTTGCGATACA+TGG | + | chr1_3:29414243-29414262 | None:intergenic | 35.0% |
| GTATCGCAAAAAAAGCTGAT+TGG | - | chr1_3:29414244-29414263 | Msa0113410:CDS | 35.0% | |
| GAAAAAACGTGGTTTAATGC+CGG | - | chr1_3:29414374-29414393 | Msa0113410:CDS | 35.0% | |
| AAAAAACGTGGTTTAATGCC+GGG | - | chr1_3:29414375-29414394 | Msa0113410:CDS | 35.0% | |
| TGAAATAAGCTCGTTTGAGA+AGG | + | chr1_3:29414406-29414425 | None:intergenic | 35.0% | |
| GTGATGCTGTTGAAATTGAA+AGG | - | chr1_3:29414517-29414536 | Msa0113410:CDS | 35.0% | |
| ! | GTTTGTTGCTGATAGGTTAT+TGG | - | chr1_3:29414611-29414630 | Msa0113410:CDS | 35.0% |
| ATGTTCAGAATCCGTTTGAT+TGG | - | chr1_3:29414661-29414680 | Msa0113410:CDS | 35.0% | |
| ! | ATGGAATTGATTTCGCTTCA+GGG | - | chr1_3:29414684-29414703 | Msa0113410:CDS | 35.0% |
| !!! | TTTTTTTGAGAAGCGTGTTG+GGG | - | chr1_3:29414716-29414735 | Msa0113410:CDS | 35.0% |
| !!! | TGCTGATTTTTGCTTCAAGT+TGG | - | chr1_3:29414785-29414804 | Msa0113410:CDS | 35.0% |
| TGCGATCTGGAAACCATAAA+AGG | + | chr1_3:29414121-29414140 | None:intergenic | 40.0% | |
| ! | GGATGTTTTCAATTGCGATC+TGG | + | chr1_3:29414134-29414153 | None:intergenic | 40.0% |
| GAAGAGAATACATCTCAGAG+TGG | + | chr1_3:29414155-29414174 | None:intergenic | 40.0% | |
| GTTGCATTTGCTTGTGTTGA+AGG | - | chr1_3:29414312-29414331 | Msa0113410:CDS | 40.0% | |
| !!! | GTTGAAGGCATCTTTTTCTC+TGG | - | chr1_3:29414327-29414346 | Msa0113410:CDS | 40.0% |
| TCGTTTGAGAAGGTTAATCC+CGG | + | chr1_3:29414396-29414415 | None:intergenic | 40.0% | |
| GAGCTTATTTCACGTGATGA+AGG | - | chr1_3:29414414-29414433 | Msa0113410:CDS | 40.0% | |
| TCAGAATCCGTTTGATTGGA+TGG | - | chr1_3:29414665-29414684 | Msa0113410:CDS | 40.0% | |
| ! | GATGGAATTGATTTCGCTTC+AGG | - | chr1_3:29414683-29414702 | Msa0113410:CDS | 40.0% |
| ! | TGGAATTGATTTCGCTTCAG+GGG | - | chr1_3:29414685-29414704 | Msa0113410:CDS | 40.0% |
| TGCGATCTGGAAACCATAAA+AGG | + | chr1_3:29414121-29414140 | None:intergenic | 40.0% | |
| ! | GGATGTTTTCAATTGCGATC+TGG | + | chr1_3:29414134-29414153 | None:intergenic | 40.0% |
| GAAGAGAATACATCTCAGAG+TGG | + | chr1_3:29414155-29414174 | None:intergenic | 40.0% | |
| GTTGCATTTGCTTGTGTTGA+AGG | - | chr1_3:29414312-29414331 | Msa0113410:CDS | 40.0% | |
| !!! | GTTGAAGGCATCTTTTTCTC+TGG | - | chr1_3:29414327-29414346 | Msa0113410:CDS | 40.0% |
| TCGTTTGAGAAGGTTAATCC+CGG | + | chr1_3:29414396-29414415 | None:intergenic | 40.0% | |
| GAGCTTATTTCACGTGATGA+AGG | - | chr1_3:29414414-29414433 | Msa0113410:CDS | 40.0% | |
| TCAGAATCCGTTTGATTGGA+TGG | - | chr1_3:29414665-29414684 | Msa0113410:CDS | 40.0% | |
| ! | GATGGAATTGATTTCGCTTC+AGG | - | chr1_3:29414683-29414702 | Msa0113410:CDS | 40.0% |
| ! | TGGAATTGATTTCGCTTCAG+GGG | - | chr1_3:29414685-29414704 | Msa0113410:CDS | 40.0% |
| GGATTGGGAACATGCAGAAT+CGG | + | chr1_3:29413876-29413895 | None:intergenic | 45.0% | |
| AAAAAGCCGAAGCCTCATTC+TGG | - | chr1_3:29413923-29413942 | Msa0113410:CDS | 45.0% | |
| ! | GGAGGAAAGATCGACTTCTT+CGG | + | chr1_3:29413953-29413972 | None:intergenic | 45.0% |
| ATTCTGCCAGTGCTTGAGAT+CGG | + | chr1_3:29413974-29413993 | None:intergenic | 45.0% | |
| ! | ACCATAAAAGGCACGTGCTT+CGG | + | chr1_3:29414109-29414128 | None:intergenic | 45.0% |
| AAGCTGATTGGGCGATGAAA+TGG | - | chr1_3:29414256-29414275 | Msa0113410:CDS | 45.0% | |
| ! | GAAGCTTCTGTGCGATTTTC+TGG | - | chr1_3:29414349-29414368 | Msa0113410:CDS | 45.0% |
| ACAATTTCTTTCACGCGCTC+TGG | + | chr1_3:29414495-29414514 | None:intergenic | 45.0% | |
| GATAGGTTATTGGGTGAGCT+TGG | - | chr1_3:29414621-29414640 | Msa0113410:CDS | 45.0% | |
| GGATTGGGAACATGCAGAAT+CGG | + | chr1_3:29413876-29413895 | None:intergenic | 45.0% | |
| AAAAAGCCGAAGCCTCATTC+TGG | - | chr1_3:29413923-29413942 | Msa0113410:CDS | 45.0% | |
| ! | GGAGGAAAGATCGACTTCTT+CGG | + | chr1_3:29413953-29413972 | None:intergenic | 45.0% |
| ATTCTGCCAGTGCTTGAGAT+CGG | + | chr1_3:29413974-29413993 | None:intergenic | 45.0% | |
| ! | ACCATAAAAGGCACGTGCTT+CGG | + | chr1_3:29414109-29414128 | None:intergenic | 45.0% |
| AAGCTGATTGGGCGATGAAA+TGG | - | chr1_3:29414256-29414275 | Msa0113410:CDS | 45.0% | |
| ! | GAAGCTTCTGTGCGATTTTC+TGG | - | chr1_3:29414349-29414368 | Msa0113410:CDS | 45.0% |
| ACAATTTCTTTCACGCGCTC+TGG | + | chr1_3:29414495-29414514 | None:intergenic | 45.0% | |
| GATAGGTTATTGGGTGAGCT+TGG | - | chr1_3:29414621-29414640 | Msa0113410:CDS | 45.0% | |
| ! | AGGGGTTCTTCTGGAAAAGC+AGG | + | chr1_3:29413835-29413854 | None:intergenic | 50.0% |
| TGCAGAATCGGTCTGGGTTT+GGG | + | chr1_3:29413864-29413883 | None:intergenic | 50.0% | |
| ATGCAGAATCGGTCTGGGTT+TGG | + | chr1_3:29413865-29413884 | None:intergenic | 50.0% | |
| GGAACATGCAGAATCGGTCT+GGG | + | chr1_3:29413870-29413889 | None:intergenic | 50.0% | |
| ! | GGAAAGATCGACTTCTTCGG+CGG | + | chr1_3:29413950-29413969 | None:intergenic | 50.0% |
| TTTCCTCCGATCTCAAGCAC+TGG | - | chr1_3:29413965-29413984 | Msa0113410:CDS | 50.0% | |
| CACTGGCAGAATCTAACCGA+CGG | - | chr1_3:29413982-29414001 | Msa0113410:CDS | 50.0% | |
| ATCGTCCTCGAAAATCTCGC+CGG | - | chr1_3:29414057-29414076 | Msa0113410:CDS | 50.0% | |
| ! | ATCTACCGGCGAGATTTTCG+AGG | + | chr1_3:29414065-29414084 | None:intergenic | 50.0% |
| ! | TCCGAAGCACGTGCCTTTTA+TGG | - | chr1_3:29414105-29414124 | Msa0113410:CDS | 50.0% |
| TTCATCCCAACCAATGCGCA+AGG | + | chr1_3:29414564-29414583 | None:intergenic | 50.0% | |
| !! | TGCGCATTGGTTGGGATGAA+TGG | - | chr1_3:29414564-29414583 | Msa0113410:CDS | 50.0% |
| !! | GCGCATTGGTTGGGATGAAT+GGG | - | chr1_3:29414565-29414584 | Msa0113410:CDS | 50.0% |
| !! | CGCATTGGTTGGGATGAATG+GGG | - | chr1_3:29414566-29414585 | Msa0113410:CDS | 50.0% |
| !! | GCATTGGTTGGGATGAATGG+GGG | - | chr1_3:29414567-29414586 | Msa0113410:CDS | 50.0% |
| GGGTGAGCTTGGTTGTGAAA+AGG | - | chr1_3:29414632-29414651 | Msa0113410:CDS | 50.0% | |
| ! | AGGGGTTCTTCTGGAAAAGC+AGG | + | chr1_3:29413835-29413854 | None:intergenic | 50.0% |
| TGCAGAATCGGTCTGGGTTT+GGG | + | chr1_3:29413864-29413883 | None:intergenic | 50.0% | |
| ATGCAGAATCGGTCTGGGTT+TGG | + | chr1_3:29413865-29413884 | None:intergenic | 50.0% | |
| GGAACATGCAGAATCGGTCT+GGG | + | chr1_3:29413870-29413889 | None:intergenic | 50.0% | |
| ! | GGAAAGATCGACTTCTTCGG+CGG | + | chr1_3:29413950-29413969 | None:intergenic | 50.0% |
| TTTCCTCCGATCTCAAGCAC+TGG | - | chr1_3:29413965-29413984 | Msa0113410:CDS | 50.0% | |
| CACTGGCAGAATCTAACCGA+CGG | - | chr1_3:29413982-29414001 | Msa0113410:CDS | 50.0% | |
| ATCGTCCTCGAAAATCTCGC+CGG | - | chr1_3:29414057-29414076 | Msa0113410:CDS | 50.0% | |
| ! | ATCTACCGGCGAGATTTTCG+AGG | + | chr1_3:29414065-29414084 | None:intergenic | 50.0% |
| ! | TCCGAAGCACGTGCCTTTTA+TGG | - | chr1_3:29414105-29414124 | Msa0113410:CDS | 50.0% |
| TTCATCCCAACCAATGCGCA+AGG | + | chr1_3:29414564-29414583 | None:intergenic | 50.0% | |
| !! | TGCGCATTGGTTGGGATGAA+TGG | - | chr1_3:29414564-29414583 | Msa0113410:CDS | 50.0% |
| !! | GCGCATTGGTTGGGATGAAT+GGG | - | chr1_3:29414565-29414584 | Msa0113410:CDS | 50.0% |
| !! | CGCATTGGTTGGGATGAATG+GGG | - | chr1_3:29414566-29414585 | Msa0113410:CDS | 50.0% |
| !! | GCATTGGTTGGGATGAATGG+GGG | - | chr1_3:29414567-29414586 | Msa0113410:CDS | 50.0% |
| GGGTGAGCTTGGTTGTGAAA+AGG | - | chr1_3:29414632-29414651 | Msa0113410:CDS | 50.0% | |
| ! | TCTGGGTTTGGGGCAAGAAG+GGG | + | chr1_3:29413853-29413872 | None:intergenic | 55.0% |
| ! | GTCTGGGTTTGGGGCAAGAA+GGG | + | chr1_3:29413854-29413873 | None:intergenic | 55.0% |
| GCAGAATCGGTCTGGGTTTG+GGG | + | chr1_3:29413863-29413882 | None:intergenic | 55.0% | |
| GGGAACATGCAGAATCGGTC+TGG | + | chr1_3:29413871-29413890 | None:intergenic | 55.0% | |
| TTCTTCGGCGGTCCAGAATG+AGG | + | chr1_3:29413938-29413957 | None:intergenic | 55.0% | |
| CGAGGACGTGAGAGATGAAG+TGG | + | chr1_3:29414014-29414033 | None:intergenic | 55.0% | |
| AGGCACGTGCTTCGGAGATT+TGG | + | chr1_3:29414101-29414120 | None:intergenic | 55.0% | |
| !! | CGCTTCCTTGCGCATTGGTT+GGG | - | chr1_3:29414556-29414575 | Msa0113410:CDS | 55.0% |
| ! | TCTGGGTTTGGGGCAAGAAG+GGG | + | chr1_3:29413853-29413872 | None:intergenic | 55.0% |
| ! | GTCTGGGTTTGGGGCAAGAA+GGG | + | chr1_3:29413854-29413873 | None:intergenic | 55.0% |
| GCAGAATCGGTCTGGGTTTG+GGG | + | chr1_3:29413863-29413882 | None:intergenic | 55.0% | |
| GGGAACATGCAGAATCGGTC+TGG | + | chr1_3:29413871-29413890 | None:intergenic | 55.0% | |
| TTCTTCGGCGGTCCAGAATG+AGG | + | chr1_3:29413938-29413957 | None:intergenic | 55.0% | |
| CGAGGACGTGAGAGATGAAG+TGG | + | chr1_3:29414014-29414033 | None:intergenic | 55.0% | |
| AGGCACGTGCTTCGGAGATT+TGG | + | chr1_3:29414101-29414120 | None:intergenic | 55.0% | |
| !! | CGCTTCCTTGCGCATTGGTT+GGG | - | chr1_3:29414556-29414575 | Msa0113410:CDS | 55.0% |
| GGGGCAAGAAGGGGTTCTTC+TGG | + | chr1_3:29413844-29413863 | None:intergenic | 60.0% | |
| ! | GGTCTGGGTTTGGGGCAAGA+AGG | + | chr1_3:29413855-29413874 | None:intergenic | 60.0% |
| GGCGGTCCAGAATGAGGCTT+CGG | + | chr1_3:29413932-29413951 | None:intergenic | 60.0% | |
| CTGCCAGTGCTTGAGATCGG+AGG | + | chr1_3:29413971-29413990 | None:intergenic | 60.0% | |
| GATGAAGTGGCGTTCGCCGT+CGG | + | chr1_3:29414001-29414020 | None:intergenic | 60.0% | |
| TTCGAGGACGATGCCGTCAG+AGG | + | chr1_3:29414049-29414068 | None:intergenic | 60.0% | |
| ! | GCGCTTCCTTGCGCATTGGT+TGG | - | chr1_3:29414555-29414574 | Msa0113410:CDS | 60.0% |
| GGGGCAAGAAGGGGTTCTTC+TGG | + | chr1_3:29413844-29413863 | None:intergenic | 60.0% | |
| ! | GGTCTGGGTTTGGGGCAAGA+AGG | + | chr1_3:29413855-29413874 | None:intergenic | 60.0% |
| GGCGGTCCAGAATGAGGCTT+CGG | + | chr1_3:29413932-29413951 | None:intergenic | 60.0% | |
| CTGCCAGTGCTTGAGATCGG+AGG | + | chr1_3:29413971-29413990 | None:intergenic | 60.0% | |
| GATGAAGTGGCGTTCGCCGT+CGG | + | chr1_3:29414001-29414020 | None:intergenic | 60.0% | |
| TTCGAGGACGATGCCGTCAG+AGG | + | chr1_3:29414049-29414068 | None:intergenic | 60.0% | |
| ! | GCGCTTCCTTGCGCATTGGT+TGG | - | chr1_3:29414555-29414574 | Msa0113410:CDS | 60.0% |
| GCCTTCTTCGCCGCCTCTGA+CGG | - | chr1_3:29414033-29414052 | Msa0113410:CDS | 65.0% | |
| GAGGACGATGCCGTCAGAGG+CGG | + | chr1_3:29414046-29414065 | None:intergenic | 65.0% | |
| CGACGCGCTTCCTTGCGCAT+TGG | - | chr1_3:29414551-29414570 | Msa0113410:CDS | 65.0% | |
| GCCTTCTTCGCCGCCTCTGA+CGG | - | chr1_3:29414033-29414052 | Msa0113410:CDS | 65.0% | |
| GAGGACGATGCCGTCAGAGG+CGG | + | chr1_3:29414046-29414065 | None:intergenic | 65.0% | |
| CGACGCGCTTCCTTGCGCAT+TGG | - | chr1_3:29414551-29414570 | Msa0113410:CDS | 65.0% | |
| CAGAGGCGGCGAAGAAGGCG+AGG | + | chr1_3:29414032-29414051 | None:intergenic | 70.0% | |
| GCCGTCAGAGGCGGCGAAGA+AGG | + | chr1_3:29414037-29414056 | None:intergenic | 70.0% | |
| CAGAGGCGGCGAAGAAGGCG+AGG | + | chr1_3:29414032-29414051 | None:intergenic | 70.0% | |
| GCCGTCAGAGGCGGCGAAGA+AGG | + | chr1_3:29414037-29414056 | None:intergenic | 70.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr1_3 | gene | 29413829 | 29414821 | 29413829 | ID=Msa0113410;Name=Msa0113410 |
| chr1_3 | mRNA | 29413829 | 29414821 | 29413829 | ID=Msa0113410-mRNA-1;Parent=Msa0113410;Name=Msa0113410-mRNA-1;_AED=0.32;_eAED=0.32;_QI=0|-1|0|1|-1|1|1|0|330 |
| chr1_3 | exon | 29413829 | 29414821 | 29413829 | ID=Msa0113410-mRNA-1:exon:9745;Parent=Msa0113410-mRNA-1 |
| chr1_3 | CDS | 29413829 | 29414821 | 29413829 | ID=Msa0113410-mRNA-1:cds;Parent=Msa0113410-mRNA-1 |
| Gene Sequence |
| Protein sequence |
