Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0080440 | XP_003591212.1 | 93.563 | 435 | 3 | 4 | 1 | 425 | 1 | 420 | 0.0 | 793 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0080440 | sp|Q9XF98|CALR_PRUAR | 81.055 | 417 | 56 | 2 | 1 | 408 | 1 | 403 | 0.0 | 601 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0080440 | G7I9H2 | 93.563 | 435 | 3 | 4 | 1 | 425 | 1 | 420 | 0.0 | 793 |
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa0006840 | Msa0080440 | 0.853235 | 2.733214e-61 | -8.615850e-47 |
| Msa0013410 | Msa0080440 | 0.815992 | 6.956714e-52 | -8.615850e-47 |
| Msa0015570 | Msa0080440 | 0.825004 | 5.937580e-54 | -8.615850e-47 |
| Msa0018920 | Msa0080440 | 0.855573 | 5.763034e-62 | -8.615850e-47 |
| Msa0020540 | Msa0080440 | 0.810561 | 1.084151e-50 | -8.615850e-47 |
| Msa0027800 | Msa0080440 | 0.835944 | 1.249229e-56 | -8.615850e-47 |
| Msa0030070 | Msa0080440 | 0.843455 | 1.386786e-58 | -8.615850e-47 |
| Msa0032980 | Msa0080440 | 0.848378 | 6.367966e-60 | -8.615850e-47 |
| Msa0038530 | Msa0080440 | 0.800833 | 1.197063e-48 | -8.615850e-47 |
| Msa0040640 | Msa0080440 | 0.816125 | 6.495627e-52 | -8.615850e-47 |
| Msa0045620 | Msa0080440 | 0.813283 | 2.769046e-51 | -8.615850e-47 |
| Msa0050530 | Msa0080440 | 0.829075 | 6.305695e-55 | -8.615850e-47 |
| Msa0063190 | Msa0080440 | 0.821438 | 4.037319e-53 | -8.615850e-47 |
| Msa0067060 | Msa0080440 | 0.810613 | 1.056306e-50 | -8.615850e-47 |
| Msa0067380 | Msa0080440 | 0.804824 | 1.794601e-49 | -8.615850e-47 |
| Msa0078130 | Msa0080440 | 0.817028 | 4.077371e-52 | -8.615850e-47 |
| Msa0079410 | Msa0080440 | 0.813122 | 3.003273e-51 | -8.615850e-47 |
| Msa0080370 | Msa0080440 | 0.982767 | 6.020080e-156 | -8.615850e-47 |
| Msa0080440 | Msa0086250 | 0.810418 | 1.164328e-50 | -8.615850e-47 |
| Msa0080440 | Msa0090440 | 0.809293 | 2.032551e-50 | -8.615850e-47 |
| Msa0080440 | Msa0091350 | 0.867221 | 1.605939e-65 | -8.615850e-47 |
| Msa0080440 | Msa0093860 | 0.805803 | 1.118964e-49 | -8.615850e-47 |
| Msa0080440 | Msa0094180 | 0.811878 | 5.616832e-51 | -8.615850e-47 |
| Msa0080440 | Msa0100600 | 0.861087 | 1.312019e-63 | -8.615850e-47 |
| Msa0080440 | Msa0100890 | 0.850010 | 2.238435e-60 | -8.615850e-47 |
| Msa0080440 | Msa0106630 | 0.810100 | 1.363386e-50 | -8.615850e-47 |
| Msa0080440 | Msa0108630 | 0.804561 | 2.035913e-49 | -8.615850e-47 |
| Msa0080440 | Msa0109730 | 0.816404 | 5.627813e-52 | -8.615850e-47 |
| Msa0080440 | Msa0112670 | 0.808319 | 3.284096e-50 | -8.615850e-47 |
| Msa0080440 | Msa0123320 | 0.814415 | 1.558911e-51 | -8.615850e-47 |
| Msa0080440 | Msa0125590 | 0.853748 | 1.946324e-61 | -8.615850e-47 |
| Msa0080440 | Msa0127340 | 0.865847 | 4.386054e-65 | -8.615850e-47 |
| Msa0080440 | Msa0131810 | 0.967206 | 5.847121e-127 | -8.615850e-47 |
| Msa0080440 | Msa0132700 | 0.817320 | 3.506418e-52 | -8.615850e-47 |
| Msa0080440 | Msa0153210 | 0.815481 | 9.041301e-52 | -8.615850e-47 |
| Msa0080440 | Msa0156050 | 0.832324 | 1.008950e-55 | -8.615850e-47 |
| Msa0080440 | Msa0156090 | 0.841456 | 4.700031e-58 | -8.615850e-47 |
| Msa0080440 | Msa0165830 | 0.846757 | 1.776814e-59 | -8.615850e-47 |
| Msa0080440 | Msa0168380 | 0.827214 | 1.770001e-54 | -8.615850e-47 |
| Msa0080440 | Msa0170070 | 0.823095 | 1.665373e-53 | -8.615850e-47 |
| Msa0080440 | Msa0173250 | 0.876443 | 1.390239e-68 | -8.615850e-47 |
| Msa0080440 | Msa0184700 | 0.821797 | 3.335271e-53 | -8.615850e-47 |
| Msa0080440 | Msa0186180 | 0.808734 | 2.678112e-50 | -8.615850e-47 |
| Msa0080440 | Msa0204970 | 0.854476 | 1.200049e-61 | -8.615850e-47 |
| Msa0080440 | Msa0206370 | 0.810837 | 9.449191e-51 | -8.615850e-47 |
| Msa0080440 | Msa0221180 | 0.801136 | 1.038363e-48 | -8.615850e-47 |
| Msa0080440 | Msa0225800 | 0.831919 | 1.270601e-55 | -8.615850e-47 |
| Msa0080440 | Msa0241040 | 0.821444 | 4.024110e-53 | -8.615850e-47 |
| Msa0080440 | Msa0249870 | 0.840299 | 9.454538e-58 | -8.615850e-47 |
| Msa0080440 | Msa0260630 | 0.828560 | 8.399520e-55 | -8.615850e-47 |
| Msa0080440 | Msa0260980 | 0.818040 | 2.411856e-52 | -8.615850e-47 |
| Msa0080440 | Msa0265310 | 0.811167 | 8.015356e-51 | -8.615850e-47 |
| Msa0080440 | Msa0278840 | 0.810312 | 1.227175e-50 | -8.615850e-47 |
| Msa0080440 | Msa0281540 | 0.859228 | 4.781435e-63 | -8.615850e-47 |
| Msa0080440 | Msa0288400 | 0.816211 | 6.215109e-52 | -8.615850e-47 |
| Msa0080440 | Msa0320580 | 0.865284 | 6.601176e-65 | -8.615850e-47 |
| Msa0080440 | Msa0331110 | 0.805406 | 1.355709e-49 | -8.615850e-47 |
| Msa0080440 | Msa0336430 | 0.815958 | 7.078325e-52 | -8.615850e-47 |
| Msa0080440 | Msa0336460 | 0.804477 | 2.120207e-49 | -8.615850e-47 |
| Msa0080440 | Msa0336520 | 0.832336 | 1.001677e-55 | -8.615850e-47 |
| Msa0080440 | Msa0341680 | 0.836858 | 7.314307e-57 | -8.615850e-47 |
| Msa0080440 | Msa0342220 | 0.815813 | 7.625712e-52 | -8.615850e-47 |
| Msa0080440 | Msa0344110 | 0.864851 | 9.031107e-65 | -8.615850e-47 |
| Msa0080440 | Msa0368920 | 0.813596 | 2.362483e-51 | -8.615850e-47 |
| Msa0080440 | Msa0373170 | 0.867851 | 1.009254e-65 | -8.615850e-47 |
| Msa0080440 | Msa0373590 | 0.803594 | 3.235574e-49 | -8.615850e-47 |
| Msa0080440 | Msa0382230 | 0.806682 | 7.305239e-50 | -8.615850e-47 |
| Msa0080440 | Msa0383000 | 0.801324 | 9.501396e-49 | -8.615850e-47 |
| Msa0080440 | Msa0388250 | 0.851280 | 9.838991e-61 | -8.615850e-47 |
| Msa0080440 | Msa0388620 | 0.836256 | 1.040817e-56 | -8.615850e-47 |
| Msa0080440 | Msa0401060 | 0.828818 | 7.277015e-55 | -8.615850e-47 |
| Msa0080440 | Msa0412130 | 0.831170 | 1.942751e-55 | -8.615850e-47 |
| Msa0080440 | Msa0413170 | 0.815972 | 7.030371e-52 | -8.615850e-47 |
| Msa0080440 | Msa0416210 | 0.823478 | 1.355456e-53 | -8.615850e-47 |
| Msa0080440 | Msa0420430 | 0.831172 | 1.940665e-55 | -8.615850e-47 |
| Msa0080440 | Msa0420670 | 0.801622 | 8.256639e-49 | -8.615850e-47 |
| Msa0080440 | Msa0421130 | 0.803986 | 2.682238e-49 | -8.615850e-47 |
| Msa0080440 | Msa0421750 | 0.868442 | 6.510261e-66 | -8.615850e-47 |
| Msa0080440 | Msa0422820 | 0.804703 | 1.901725e-49 | -8.615850e-47 |
| Msa0080440 | Msa0429970 | 0.800890 | 1.165294e-48 | -8.615850e-47 |
| Msa0080440 | Msa0432690 | 0.828932 | 6.829590e-55 | -8.615850e-47 |
| Msa0080440 | Msa0433630 | 0.822768 | 1.984832e-53 | -8.615850e-47 |
| Msa0080440 | Msa0433760 | 0.816473 | 5.430994e-52 | -8.615850e-47 |
| Msa0080440 | Msa0436100 | 0.806735 | 7.120004e-50 | -8.615850e-47 |
| Msa0080440 | Msa0437480 | 0.808548 | 2.934497e-50 | -8.615850e-47 |
| Msa0080440 | Msa0447870 | 0.804638 | 1.962324e-49 | -8.615850e-47 |
| Msa0080440 | Msa0456670 | 0.820689 | 6.005167e-53 | -8.615850e-47 |
| Msa0080440 | Msa0458100 | 0.846551 | 2.023167e-59 | -8.615850e-47 |
| Msa0080440 | Msa0461550 | 0.815363 | 9.606416e-52 | -8.615850e-47 |
| Msa0080440 | Msa0466520 | 0.848475 | 5.985116e-60 | -8.615850e-47 |
| Msa0080440 | Msa0467690 | 0.865270 | 6.670658e-65 | -8.615850e-47 |
| Msa0080440 | Msa0469060 | 0.817182 | 3.765761e-52 | -8.615850e-47 |
| Msa0080440 | Msa0477630 | 0.814820 | 1.268289e-51 | -8.615850e-47 |
| Msa0080440 | Msa0478140 | 0.800843 | 1.191618e-48 | -8.615850e-47 |
| Msa0080440 | Msa0478200 | 0.802099 | 6.589144e-49 | -8.615850e-47 |
| Msa0080440 | Msa0485980 | 0.813648 | 2.301132e-51 | -8.615850e-47 |
| Msa0080440 | Msa0504720 | 0.831107 | 2.013307e-55 | -8.615850e-47 |
| Msa0080440 | Msa0506750 | 0.809802 | 1.580462e-50 | -8.615850e-47 |
| Msa0080440 | Msa0507810 | 0.835387 | 1.729010e-56 | -8.615850e-47 |
| Msa0080440 | Msa0507820 | 0.829262 | 5.679719e-55 | -8.615850e-47 |
| Msa0080440 | Msa0507920 | 0.832414 | 9.582635e-56 | -8.615850e-47 |
| Msa0080440 | Msa0512530 | 0.803080 | 4.134362e-49 | -8.615850e-47 |
| Msa0080440 | Msa0513080 | 0.805835 | 1.101950e-49 | -8.615850e-47 |
| Msa0080440 | Msa0514020 | 0.866548 | 2.630726e-65 | -8.615850e-47 |
| Msa0080440 | Msa0520680 | 0.803198 | 3.908298e-49 | -8.615850e-47 |
| Msa0080440 | Msa0521320 | 0.811632 | 6.353756e-51 | -8.615850e-47 |
| Msa0080440 | Msa0521510 | 0.810237 | 1.273724e-50 | -8.615850e-47 |
| Msa0080440 | Msa0521530 | 0.805992 | 1.021000e-49 | -8.615850e-47 |
| Msa0080440 | Msa0521680 | 0.813203 | 2.882506e-51 | -8.615850e-47 |
| Msa0080440 | Msa0524320 | 0.819197 | 1.317804e-52 | -8.615850e-47 |
| Msa0080440 | Msa0524430 | 0.818187 | 2.234093e-52 | -8.615850e-47 |
| Msa0080440 | Msa0527850 | 0.845495 | 3.918863e-59 | -8.615850e-47 |
| Msa0080440 | Msa0541740 | 0.841058 | 5.980958e-58 | -8.615850e-47 |
| Msa0080440 | Msa0544410 | 0.834162 | 3.515706e-56 | -8.615850e-47 |
| Msa0080440 | Msa0544430 | 0.804411 | 2.187947e-49 | -8.615850e-47 |
| Msa0080440 | Msa0552570 | 0.800647 | 1.306635e-48 | -8.615850e-47 |
| Msa0080440 | Msa0553750 | 0.840535 | 8.199237e-58 | -8.615850e-47 |
| Msa0080440 | Msa0554300 | 0.852094 | 5.784413e-61 | -8.615850e-47 |
| Msa0080440 | Msa0557850 | 0.807602 | 4.666308e-50 | -8.615850e-47 |
| Msa0080440 | Msa0561560 | 0.835868 | 1.306068e-56 | -8.615850e-47 |
| Msa0080440 | Msa0563900 | 0.802720 | 4.907970e-49 | -8.615850e-47 |
| Msa0080440 | Msa0564980 | 0.837375 | 5.395536e-57 | -8.615850e-47 |
| Msa0080440 | Msa0571350 | 0.806369 | 8.507812e-50 | -8.615850e-47 |
| Msa0080440 | Msa0572830 | 0.861772 | 8.110392e-64 | -8.615850e-47 |
| Msa0080440 | Msa0574660 | 0.834584 | 2.755153e-56 | -8.615850e-47 |
| Msa0080440 | Msa0576330 | 0.812794 | 3.542916e-51 | -8.615850e-47 |
| Msa0080440 | Msa0582460 | 0.851876 | 6.671081e-61 | -8.615850e-47 |
| Msa0080440 | Msa0586200 | 0.849797 | 2.567172e-60 | -8.615850e-47 |
| Msa0080440 | Msa0590000 | 0.809827 | 1.560867e-50 | -8.615850e-47 |
| Msa0080440 | Msa0607330 | 0.821033 | 5.004975e-53 | -8.615850e-47 |
| Msa0080440 | Msa0607800 | 0.836768 | 7.708949e-57 | -8.615850e-47 |
| Msa0080440 | Msa0608350 | 0.839823 | 1.258081e-57 | -8.615850e-47 |
| Msa0080440 | Msa0612520 | 0.801570 | 8.460016e-49 | -8.615850e-47 |
| Msa0080440 | Msa0613630 | 0.800555 | 1.364465e-48 | -8.615850e-47 |
| Msa0080440 | Msa0615630 | 0.815810 | 7.637020e-52 | -8.615850e-47 |
| Msa0080440 | Msa0620500 | 0.849294 | 3.546776e-60 | -8.615850e-47 |
| Msa0080440 | Msa0623310 | 0.804807 | 1.809192e-49 | -8.615850e-47 |
| Msa0080440 | Msa0625620 | 0.836484 | 9.107838e-57 | -8.615850e-47 |
| Msa0080440 | Msa0639190 | 0.804448 | 2.149604e-49 | -8.615850e-47 |
| Msa0080440 | Msa0640800 | 0.831435 | 1.671915e-55 | -8.615850e-47 |
| Msa0080440 | Msa0647440 | 0.872187 | 3.855944e-67 | -8.615850e-47 |
| Msa0080440 | Msa0648040 | 0.852778 | 3.691855e-61 | -8.615850e-47 |
| Msa0080440 | Msa0648760 | 0.858478 | 8.016554e-63 | -8.615850e-47 |
| Msa0080440 | Msa0653160 | 0.812663 | 3.784850e-51 | -8.615850e-47 |
| Msa0080440 | Msa0654740 | 0.838190 | 3.331539e-57 | -8.615850e-47 |
| Msa0080440 | Msa0657210 | 0.838241 | 3.233246e-57 | -8.615850e-47 |
| Msa0080440 | Msa0660090 | 0.834508 | 2.878132e-56 | -8.615850e-47 |
| Msa0080440 | Msa0661480 | 0.814585 | 1.429270e-51 | -8.615850e-47 |
| Msa0080440 | Msa0663290 | 0.830530 | 2.788905e-55 | -8.615850e-47 |
| Msa0080440 | Msa0664070 | 0.841214 | 5.441453e-58 | -8.615850e-47 |
| Msa0080440 | Msa0687090 | 0.825841 | 3.762167e-54 | -8.615850e-47 |
| Msa0080440 | Msa0687370 | 0.816002 | 6.920777e-52 | -8.615850e-47 |
| Msa0080440 | Msa0688380 | 0.836297 | 1.016219e-56 | -8.615850e-47 |
| Msa0080440 | Msa0688620 | 0.842302 | 2.808890e-58 | -8.615850e-47 |
| Msa0080440 | Msa0690320 | 0.876517 | 1.310914e-68 | -8.615850e-47 |
| Msa0080440 | Msa0690570 | 0.809865 | 1.531914e-50 | -8.615850e-47 |
| Msa0080440 | Msa0690740 | 0.858792 | 6.458241e-63 | -8.615850e-47 |
| Msa0080440 | Msa0691270 | 0.837503 | 5.001500e-57 | -8.615850e-47 |
| Msa0080440 | Msa0695560 | 0.833449 | 5.298141e-56 | -8.615850e-47 |
| Msa0080440 | Msa0698730 | 0.813651 | 2.298359e-51 | -8.615850e-47 |
| Msa0080440 | Msa0701250 | 0.839550 | 1.481991e-57 | -8.615850e-47 |
| Msa0080440 | Msa0707260 | 0.835737 | 1.409611e-56 | -8.615850e-47 |
| Msa0080440 | Msa0708020 | 0.801602 | 8.334735e-49 | -8.615850e-47 |
| Msa0080440 | Msa0713080 | 0.833512 | 5.109900e-56 | -8.615850e-47 |
| Msa0080440 | Msa0713920 | 0.801949 | 7.072129e-49 | -8.615850e-47 |
| Msa0080440 | Msa0714520 | 0.820436 | 6.865535e-53 | -8.615850e-47 |
| Msa0080440 | Msa0717900 | 0.853958 | 1.693401e-61 | -8.615850e-47 |
| Msa0080440 | Msa0720280 | 0.842868 | 1.987839e-58 | -8.615850e-47 |
| Msa0080440 | Msa0749190 | 0.843013 | 1.818522e-58 | -8.615850e-47 |
| Msa0080440 | Msa0750520 | 0.846595 | 1.967860e-59 | -8.615850e-47 |
| Msa0080440 | Msa0751720 | 0.831657 | 1.474378e-55 | -8.615850e-47 |
| Msa0080440 | Msa0803140 | 0.849922 | 2.369018e-60 | -8.615850e-47 |
| Msa0080440 | Msa0816080 | 0.856277 | 3.585653e-62 | -8.615850e-47 |
| Msa0080440 | Msa0816230 | 0.806878 | 6.640176e-50 | -8.615850e-47 |
| Msa0080440 | Msa0822510 | 0.803255 | 3.804544e-49 | -8.615850e-47 |
| Msa0080440 | Msa0831820 | 0.847930 | 8.466500e-60 | -8.615850e-47 |
| Msa0080440 | Msa0837680 | 0.844578 | 6.930562e-59 | -8.615850e-47 |
| Msa0080440 | Msa0841500 | 0.843119 | 1.704169e-58 | -8.615850e-47 |
| Msa0080440 | Msa0846900 | 0.818536 | 1.862220e-52 | -8.615850e-47 |
| Msa0080440 | Msa0861440 | 0.835163 | 1.969467e-56 | -8.615850e-47 |
| Msa0080440 | Msa0866530 | 0.801202 | 1.006342e-48 | -8.615850e-47 |
| Msa0080440 | Msa0876630 | 0.829431 | 5.167299e-55 | -8.615850e-47 |
| Msa0080440 | Msa0879920 | 0.817992 | 2.473231e-52 | -8.615850e-47 |
| Msa0080440 | Msa0897790 | 0.850328 | 1.822699e-60 | -8.615850e-47 |
| Msa0080440 | Msa0900090 | 0.850492 | 1.639588e-60 | -8.615850e-47 |
| Msa0080440 | Msa0924430 | 0.804727 | 1.880242e-49 | -8.615850e-47 |
| Msa0080440 | Msa0926310 | 0.822729 | 2.027134e-53 | -8.615850e-47 |
| Msa0080440 | Msa0926760 | 0.803563 | 3.283936e-49 | -8.615850e-47 |
| Msa0080440 | Msa0929900 | 0.820352 | 7.177835e-53 | -8.615850e-47 |
| Msa0080440 | Msa0945900 | 0.831548 | 1.568464e-55 | -8.615850e-47 |
| Msa0080440 | Msa0963370 | 0.823370 | 1.436979e-53 | -8.615850e-47 |
| Msa0080440 | Msa0965470 | 0.813167 | 2.935843e-51 | -8.615850e-47 |
| Msa0080440 | Msa0976380 | 0.817249 | 3.637556e-52 | -8.615850e-47 |
| Msa0080440 | Msa0978980 | 0.831621 | 1.504838e-55 | -8.615850e-47 |
| Msa0080440 | Msa0999950 | 0.834931 | 2.253239e-56 | -8.615850e-47 |
| Msa0080440 | Msa1000780 | 0.822294 | 2.557744e-53 | -8.615850e-47 |
| Msa0080440 | Msa1008670 | 0.810392 | 1.179125e-50 | -8.615850e-47 |
| Msa0080440 | Msa1008850 | 0.847801 | 9.186111e-60 | -8.615850e-47 |
| Msa0080440 | Msa1019200 | 0.820061 | 8.366961e-53 | -8.615850e-47 |
| Msa0080440 | Msa1021560 | 0.829743 | 4.340338e-55 | -8.615850e-47 |
| Msa0080440 | Msa1033420 | 0.814704 | 1.345554e-51 | -8.615850e-47 |
| Msa0080440 | Msa1041370 | 0.833204 | 6.100600e-56 | -8.615850e-47 |
| Msa0080440 | Msa1050260 | 0.841103 | 5.820762e-58 | -8.615850e-47 |
| Msa0080440 | Msa1060900 | 0.829145 | 6.064443e-55 | -8.615850e-47 |
| Msa0080440 | Msa1071410 | 0.845898 | 3.045982e-59 | -8.615850e-47 |
| Msa0080440 | Msa1073060 | 0.801073 | 1.069612e-48 | -8.615850e-47 |
| Msa0080440 | Msa1076020 | 0.820972 | 5.170952e-53 | -8.615850e-47 |
| Msa0080440 | Msa1078860 | 0.827861 | 1.238301e-54 | -8.615850e-47 |
| Msa0080440 | Msa1078990 | 0.815452 | 9.180686e-52 | -8.615850e-47 |
| Msa0080440 | Msa1081270 | 0.839325 | 1.695271e-57 | -8.615850e-47 |
| Msa0080440 | Msa1082380 | 0.827653 | 1.388825e-54 | -8.615850e-47 |
| Msa0080440 | Msa1085680 | 0.814376 | 1.589759e-51 | -8.615850e-47 |
| Msa0080440 | Msa1104110 | 0.808734 | 2.677794e-50 | -8.615850e-47 |
| Msa0080440 | Msa1105540 | 0.825781 | 3.886825e-54 | -8.615850e-47 |
| Msa0080440 | Msa1105580 | 0.813287 | 2.762604e-51 | -8.615850e-47 |
| Msa0080440 | Msa1106220 | 0.834803 | 2.425988e-56 | -8.615850e-47 |
| Msa0080440 | Msa1119380 | 0.800365 | 1.491583e-48 | -8.615850e-47 |
| Msa0080440 | Msa1127280 | 0.831890 | 1.291364e-55 | -8.615850e-47 |
| Msa0080440 | Msa1138800 | 0.831956 | 1.244001e-55 | -8.615850e-47 |
| Msa0080440 | Msa1144990 | 0.831739 | 1.407513e-55 | -8.615850e-47 |
| Msa0080440 | Msa1147700 | 0.802949 | 4.400407e-49 | -8.615850e-47 |
| Msa0080440 | Msa1148630 | 0.834389 | 3.083231e-56 | -8.615850e-47 |
| Msa0080440 | Msa1148930 | 0.830936 | 2.217207e-55 | -8.615850e-47 |
| Msa0080440 | Msa1149450 | 0.804625 | 1.974352e-49 | -8.615850e-47 |
| Msa0080440 | Msa1163180 | 0.835737 | 1.410007e-56 | -8.615850e-47 |
| Msa0080440 | Msa1165480 | 0.834712 | 2.557099e-56 | -8.615850e-47 |
| Msa0080440 | Msa1168310 | 0.805035 | 1.621241e-49 | -8.615850e-47 |
| Msa0080440 | Msa1169170 | 0.817935 | 2.547754e-52 | -8.615850e-47 |
| Msa0080440 | Msa1169690 | 0.816600 | 5.086091e-52 | -8.615850e-47 |
| Msa0080440 | Msa1183910 | 0.802663 | 5.041384e-49 | -8.615850e-47 |
| Msa0080440 | Msa1188340 | 0.825337 | 4.953576e-54 | -8.615850e-47 |
| Msa0080440 | Msa1190390 | 0.803723 | 3.042256e-49 | -8.615850e-47 |
| Msa0080440 | Msa1191000 | 0.832313 | 1.015049e-55 | -8.615850e-47 |
| Msa0080440 | Msa1201780 | 0.838537 | 2.711982e-57 | -8.615850e-47 |
| Msa0080440 | Msa1206040 | 0.839277 | 1.744948e-57 | -8.615850e-47 |
| Msa0080440 | Msa1213830 | 0.840838 | 6.830266e-58 | -8.615850e-47 |
| Msa0080440 | Msa1214350 | 0.800528 | 1.381722e-48 | -8.615850e-47 |
| Msa0080440 | Msa1215980 | 0.849393 | 3.327477e-60 | -8.615850e-47 |
| Msa0080440 | Msa1217890 | 0.803706 | 3.066618e-49 | -8.615850e-47 |
| Msa0080440 | Msa1219770 | 0.803274 | 3.768981e-49 | -8.615850e-47 |
| Msa0080440 | Msa1223390 | 0.813341 | 2.687914e-51 | -8.615850e-47 |
| Msa0080440 | Msa1226370 | 0.844490 | 7.320795e-59 | -8.615850e-47 |
| Msa0080440 | Msa1231490 | 0.806765 | 7.018574e-50 | -8.615850e-47 |
| Msa0080440 | Msa1236150 | 0.815507 | 8.922549e-52 | -8.615850e-47 |
| Msa0080440 | Msa1240940 | 0.838024 | 3.676229e-57 | -8.615850e-47 |
| Msa0080440 | Msa1252790 | 0.837326 | 5.552681e-57 | -8.615850e-47 |
| Msa0080440 | Msa1254420 | 0.852279 | 5.122318e-61 | -8.615850e-47 |
| Msa0080440 | Msa1254540 | 0.822490 | 2.303207e-53 | -8.615850e-47 |
| Msa0080440 | Msa1263740 | 0.819946 | 8.890532e-53 | -8.615850e-47 |
| Msa0080440 | Msa1265570 | 0.805927 | 1.053740e-49 | -8.615850e-47 |
| Msa0080440 | Msa1266690 | 0.808061 | 3.725768e-50 | -8.615850e-47 |
| Msa0080440 | Msa1267930 | 0.839878 | 1.217657e-57 | -8.615850e-47 |
| Msa0080440 | Msa1279120 | 0.826373 | 2.811978e-54 | -8.615850e-47 |
| Msa0080440 | Msa1282300 | 0.837451 | 5.156936e-57 | -8.615850e-47 |
| Msa0080440 | Msa1294280 | 0.808807 | 2.583029e-50 | -8.615850e-47 |
| Msa0080440 | Msa1294460 | 0.845453 | 4.024074e-59 | -8.615850e-47 |
| Msa0080440 | Msa1294790 | 0.875102 | 4.012727e-68 | -8.615850e-47 |
| Msa0080440 | Msa1297070 | 0.841881 | 3.629853e-58 | -8.615850e-47 |
| Msa0080440 | Msa1300460 | 0.828288 | 9.772734e-55 | -8.615850e-47 |
| Msa0080440 | Msa1301820 | 0.838432 | 2.885537e-57 | -8.615850e-47 |
| Msa0080440 | Msa1305920 | 0.825462 | 4.626480e-54 | -8.615850e-47 |
| Msa0080440 | Msa1321530 | 0.813104 | 3.030163e-51 | -8.615850e-47 |
| Msa0080440 | Msa1328280 | 0.815058 | 1.122837e-51 | -8.615850e-47 |
| Msa0080440 | Msa1328870 | 0.830255 | 3.255914e-55 | -8.615850e-47 |
| Msa0080440 | Msa1332950 | 0.835856 | 1.314942e-56 | -8.615850e-47 |
| Msa0080440 | Msa1333360 | 0.807343 | 5.294675e-50 | -8.615850e-47 |
| Msa0080440 | Msa1334670 | 0.809114 | 2.220779e-50 | -8.615850e-47 |
| Msa0080440 | Msa1339170 | 0.810303 | 1.232619e-50 | -8.615850e-47 |
| Msa0080440 | Msa1342810 | 0.825224 | 5.268472e-54 | -8.615850e-47 |
| Msa0080440 | Msa1361930 | 0.836364 | 9.771086e-57 | -8.615850e-47 |
| Msa0080440 | Msa1364680 | 0.816402 | 5.633738e-52 | -8.615850e-47 |
| Msa0080440 | Msa1365230 | 0.809317 | 2.008596e-50 | -8.615850e-47 |
| Msa0080440 | Msa1368170 | 0.812922 | 3.322894e-51 | -8.615850e-47 |
| Msa0080440 | Msa1371800 | 0.819841 | 9.398614e-53 | -8.615850e-47 |
| Msa0080440 | Msa1372030 | 0.842279 | 2.849908e-58 | -8.615850e-47 |
| Msa0080440 | Msa1376310 | 0.819381 | 1.196826e-52 | -8.615850e-47 |
| Msa0080440 | Msa1381470 | 0.801890 | 7.272674e-49 | -8.615850e-47 |
| Msa0080440 | Msa1381800 | 0.847288 | 1.271603e-59 | -8.615850e-47 |
| Msa0080440 | Msa1385570 | 0.829010 | 6.538547e-55 | -8.615850e-47 |
| Msa0080440 | Msa1387500 | 0.806723 | 7.160841e-50 | -8.615850e-47 |
| Msa0080440 | Msa1389820 | 0.863171 | 3.011830e-64 | -8.615850e-47 |
| Msa0080440 | Msa1393560 | 0.845911 | 3.021673e-59 | -8.615850e-47 |
| Msa0080440 | Msa1399190 | 0.804622 | 1.977739e-49 | -8.615850e-47 |
| Msa0080440 | Msa1402010 | 0.862179 | 6.087134e-64 | -8.615850e-47 |
| Msa0080440 | Msa1406720 | 0.836459 | 9.243774e-57 | -8.615850e-47 |
| Msa0080440 | Msa1424370 | 0.830768 | 2.438339e-55 | -8.615850e-47 |
| Msa0080440 | Msa1424590 | 0.815419 | 9.335943e-52 | -8.615850e-47 |
| Msa0080440 | Msa1426320 | 0.859032 | 5.474130e-63 | -8.615850e-47 |
| Msa0080440 | Msa1428000 | 0.802401 | 5.708673e-49 | -8.615850e-47 |
| Msa0080440 | Msa1432060 | 0.804085 | 2.558316e-49 | -8.615850e-47 |
| Msa0080440 | Msa1432520 | 0.818788 | 1.632782e-52 | -8.615850e-47 |
| Msa0080440 | Msa1434640 | 0.807030 | 6.167026e-50 | -8.615850e-47 |
| Msa0080440 | Msa1435100 | 0.800017 | 1.755547e-48 | -8.615850e-47 |
| Msa0080440 | Msa1439730 | 0.800786 | 1.223754e-48 | -8.615850e-47 |
| Msa0080440 | Msa1442260 | 0.804053 | 2.597881e-49 | -8.615850e-47 |
| Msa0080440 | Msa1448960 | 0.800906 | 1.156644e-48 | -8.615850e-47 |
| Msa0080440 | Msa1457840 | 0.807918 | 3.997250e-50 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0080440 | MtrunA17_Chr1g0192661 | 93.563 | 435 | 3 | 4 | 1 | 425 | 1 | 420 | 0.0 | 793 |
| Msa0080440 | MtrunA17_Chr7g0249551 | 59.504 | 363 | 122 | 3 | 10 | 361 | 9 | 357 | 5.04e-158 | 452 |
| Msa0080440 | MtrunA17_Chr4g0033731 | 57.260 | 365 | 133 | 2 | 1 | 356 | 1 | 351 | 1.29e-152 | 439 |
| Msa0080440 | MtrunA17_Chr8g0385501 | 36.235 | 425 | 187 | 15 | 1 | 358 | 1 | 408 | 6.15e-54 | 188 |
| Msa0080440 | MtrunA17_Chr3g0131441 | 33.886 | 422 | 198 | 15 | 1 | 358 | 1 | 405 | 9.23e-52 | 182 |
| Msa0080440 | MtrunA17_Chr3g0130491 | 85.294 | 34 | 5 | 0 | 329 | 362 | 16 | 49 | 2.17e-12 | 61.6 |
| Msa0080440 | MtrunA17_Chr3g0130481 | 85.106 | 47 | 4 | 3 | 380 | 425 | 29 | 73 | 2.35e-11 | 59.3 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0080440 | AT1G09210.1 | 76.291 | 426 | 76 | 3 | 8 | 422 | 6 | 417 | 0.0 | 583 |
| Msa0080440 | AT1G56340.2 | 79.088 | 373 | 55 | 2 | 7 | 370 | 5 | 363 | 0.0 | 579 |
| Msa0080440 | AT1G56340.1 | 78.920 | 389 | 59 | 2 | 7 | 386 | 5 | 379 | 0.0 | 578 |
| Msa0080440 | AT1G08450.1 | 53.947 | 380 | 152 | 2 | 10 | 380 | 14 | 379 | 1.97e-151 | 436 |
| Msa0080440 | AT1G08450.3 | 48.684 | 380 | 147 | 2 | 10 | 380 | 14 | 354 | 3.24e-131 | 384 |
| Msa0080440 | AT1G08450.2 | 47.978 | 371 | 134 | 2 | 10 | 380 | 14 | 325 | 1.27e-121 | 358 |
| Msa0080440 | AT5G61790.1 | 35.714 | 406 | 187 | 13 | 10 | 358 | 13 | 401 | 1.97e-63 | 213 |
| Msa0080440 | AT5G07340.1 | 34.515 | 423 | 193 | 15 | 19 | 381 | 22 | 420 | 9.32e-49 | 174 |
| Msa0080440 | AT5G07340.2 | 35.194 | 412 | 183 | 15 | 30 | 381 | 41 | 428 | 1.72e-48 | 174 |
Find 132 sgRNAs with CRISPR-Local
Find 234 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| ACCTCTGGCTTCTTGTCTTC+AGG | 0.169701 | 1_2:+58698309 | None:intergenic |
| TTCAGTGCTGTGGGTAAATT+TGG | 0.180938 | 1_2:+58700364 | None:intergenic |
| TTCCATGGTCCCTTGTACTC+TGG | 0.182700 | 1_2:+58698014 | None:intergenic |
| GTTCATGCTTGACAGAAAAT+TGG | 0.241397 | 1_2:+58698920 | None:intergenic |
| TTATCCTTGTTGCTGAATTC+AGG | 0.265305 | 1_2:+58698955 | None:intergenic |
| ATGTACGTCGTCCTCTTTAT+TGG | 0.266525 | 1_2:+58697131 | None:intergenic |
| TTCCACTTTCCACTGTAGTT+GGG | 0.290555 | 1_2:+58697884 | None:intergenic |
| TTGATTTGTTTACTAACTTT+TGG | 0.303651 | 1_2:-58697935 | Msa0080440:CDS |
| TCAGGATCAGCAACCTCTTT+AGG | 0.312415 | 1_2:+58698182 | None:intergenic |
| TTCCATTGCAATGGCGATTA+GGG | 0.314157 | 1_2:-58700239 | Msa0080440:exon |
| AGAACGAGAGAGAGAAGGTT+AGG | 0.314409 | 1_2:+58700208 | None:intergenic |
| CTTCCACTTTCCACTGTAGT+TGG | 0.316605 | 1_2:+58697883 | None:intergenic |
| GATGTTGATCAGAAGAAATT+TGG | 0.323562 | 1_2:-58698853 | Msa0080440:CDS |
| CCTCTGGCTTCTTGTCTTCA+GGG | 0.335164 | 1_2:+58698310 | None:intergenic |
| ATTCCATTGCAATGGCGATT+AGG | 0.335328 | 1_2:-58700240 | Msa0080440:exon |
| CAAGGACCCAGAGGCCAAAA+AGG | 0.346525 | 1_2:-58698465 | Msa0080440:intron |
| GGCTTCTTGTCTTCAGGGTC+AGG | 0.351167 | 1_2:+58698315 | None:intergenic |
| TCCTTATCATCCCAATCTTC+TGG | 0.358229 | 1_2:+58698345 | None:intergenic |
| TGCTGATCCTGATGCCAAAA+AGG | 0.359945 | 1_2:-58698171 | Msa0080440:intron |
| TTTCAACGGTCTGCTTATCT+AGG | 0.361099 | 1_2:+58696911 | None:intergenic |
| TCCATGGTCCCTTGTACTCT+GGG | 0.365819 | 1_2:+58698015 | None:intergenic |
| TCGCAGAAGCGATGGATAGA+AGG | 0.367240 | 1_2:+58700179 | None:intergenic |
| TTAACTTTGCAGGTGAAATC+TGG | 0.376979 | 1_2:-58697600 | Msa0080440:intron |
| TATATATTTACCAGACTTCA+AGG | 0.404034 | 1_2:-58697757 | Msa0080440:intron |
| CATTGTTTCTTTCAGTGCTG+TGG | 0.408672 | 1_2:+58700354 | None:intergenic |
| AGCAACTTGCTTAGCATACT+CGG | 0.412572 | 1_2:+58697542 | None:intergenic |
| AATACTTACAGCCAGAAGAT+TGG | 0.416134 | 1_2:-58698356 | Msa0080440:intron |
| GAACATCCTTCTTGATTAAG+TGG | 0.416832 | 1_2:+58698627 | None:intergenic |
| AATGAGAGTGAGAGCTACTT+TGG | 0.420398 | 1_2:+58700289 | None:intergenic |
| ATGCCAACATACTTCAACTT+GGG | 0.437777 | 1_2:+58697711 | None:intergenic |
| ATACTTACAGCCAGAAGATT+GGG | 0.440491 | 1_2:-58698355 | Msa0080440:intron |
| TATCCTTGTTGCTGAATTCA+GGG | 0.448897 | 1_2:+58698956 | None:intergenic |
| ATAAAATCTGTAATCTTCAC+TGG | 0.449401 | 1_2:+58698996 | None:intergenic |
| AAACAAACCTTTGGCTTCCA+TGG | 0.453885 | 1_2:+58697999 | None:intergenic |
| AGAGTCATGGCTAACTTCAT+TGG | 0.454725 | 1_2:+58697194 | None:intergenic |
| GAACGAGAGAGAGAAGGTTA+GGG | 0.456719 | 1_2:+58700209 | None:intergenic |
| TAAGTGGTTTGTGTCATTGT+AGG | 0.461585 | 1_2:+58698643 | None:intergenic |
| GCCAGAAGATTGGGATGATA+AGG | 0.462026 | 1_2:-58698346 | Msa0080440:CDS |
| CATTGCCAACCCAGAGTACA+AGG | 0.463149 | 1_2:-58698024 | Msa0080440:CDS |
| ATTGTTTCTTTCAGTGCTGT+GGG | 0.463564 | 1_2:+58700355 | None:intergenic |
| TCCACTTTCCACTGTAGTTG+GGG | 0.465244 | 1_2:+58697885 | None:intergenic |
| CTGGTAGTCTTTACTCTGAC+TGG | 0.467326 | 1_2:-58698511 | Msa0080440:CDS |
| CGTTGATTCTGATGCGGAAG+AGG | 0.469655 | 1_2:-58697229 | Msa0080440:CDS |
| TTGGGGAAAACATAGATGTC+AGG | 0.470534 | 1_2:+58697729 | None:intergenic |
| GATAATGTGGAGAAGCAAAC+TGG | 0.475988 | 1_2:-58698530 | Msa0080440:CDS |
| AGAAACATGGGGCAAGCAAA+AGG | 0.486201 | 1_2:-58697517 | Msa0080440:CDS |
| AGAAGGATGAGAACTTGGCC+GGG | 0.487362 | 1_2:-58699187 | Msa0080440:CDS |
| ATGAGAACTTGGCCGGGGAG+TGG | 0.492077 | 1_2:-58699181 | Msa0080440:CDS |
| AAAATGCTGTAGGTTGCATC+AGG | 0.493543 | 1_2:+58698557 | None:intergenic |
| CGCAGAAGCGATGGATAGAA+GGG | 0.494372 | 1_2:+58700180 | None:intergenic |
| TCCTCATCATCCCAGTCCTC+AGG | 0.495577 | 1_2:+58698071 | None:intergenic |
| TTCCCCAAGTTGAAGTATGT+TGG | 0.497182 | 1_2:-58697714 | Msa0080440:CDS |
| CTTGTACTCTGGGTTGGCAA+TGG | 0.498402 | 1_2:+58698025 | None:intergenic |
| GAAAACCTTCGCAGAAGCGA+TGG | 0.502839 | 1_2:+58700171 | None:intergenic |
| AGCAAGTTGCTGAAGAAACA+TGG | 0.506018 | 1_2:-58697530 | Msa0080440:CDS |
| TATGTTCTTGCAGGCTGAGA+AGG | 0.508527 | 1_2:-58697415 | Msa0080440:intron |
| TTCTTCGAAGAGCGCTTCGA+AGG | 0.509596 | 1_2:-58700151 | Msa0080440:intron |
| TTCTGATGCGGAAGAGGATG+AGG | 0.510129 | 1_2:-58697223 | Msa0080440:CDS |
| ATGGAAGAAGGATGAGAACT+TGG | 0.515979 | 1_2:-58699192 | Msa0080440:CDS |
| TCTATCCATCGCTTCTGCGA+AGG | 0.516389 | 1_2:-58700176 | Msa0080440:CDS |
| AAGAAGGATGAGAACTTGGC+CGG | 0.516801 | 1_2:-58699188 | Msa0080440:CDS |
| AATGCCAACATACTTCAACT+TGG | 0.516939 | 1_2:+58697710 | None:intergenic |
| GGAACTACACCTCTGGTCAA+TGG | 0.518922 | 1_2:-58699160 | Msa0080440:CDS |
| GATGAGTCAAAGGCAGAAGC+TGG | 0.519873 | 1_2:-58697171 | Msa0080440:CDS |
| CTCTTCCGCATCAGAATCAA+CGG | 0.521513 | 1_2:+58697230 | None:intergenic |
| TTCAGGGAACTCAGCAGAGA+TGG | 0.522780 | 1_2:+58698972 | None:intergenic |
| GGTAAAATCTGAATGGAAGA+AGG | 0.524814 | 1_2:-58699204 | Msa0080440:CDS |
| TGGTCCCTTGTACTCTGGGT+TGG | 0.525060 | 1_2:+58698019 | None:intergenic |
| AAACCTGGGTTGTCAATCAA+TGG | 0.532475 | 1_2:+58697857 | None:intergenic |
| TTACGTGGATGTTGCTTACG+TGG | 0.533140 | 1_2:+58700391 | None:intergenic |
| TGTTGTGTAGCCTGAGGACT+GGG | 0.537049 | 1_2:-58698081 | Msa0080440:intron |
| AACCCTAATCGCCATTGCAA+TGG | 0.540276 | 1_2:+58700237 | None:intergenic |
| TCTTCCGCATCAGAATCAAC+GGG | 0.545764 | 1_2:+58697231 | None:intergenic |
| CACAAACCACTTAATCAAGA+AGG | 0.545807 | 1_2:-58698633 | Msa0080440:CDS |
| GGGGAGTGGAACTACACCTC+TGG | 0.546989 | 1_2:-58699167 | Msa0080440:CDS |
| GCAACTTGCTTAGCATACTC+GGG | 0.550973 | 1_2:+58697543 | None:intergenic |
| CTAAAGATGGATGGGAAAGC+CGG | 0.553813 | 1_2:-58699229 | Msa0080440:intron |
| GCCGGTGGGTAAAATCTGAA+TGG | 0.553831 | 1_2:-58699211 | Msa0080440:CDS |
| TGTTGAATGCTAAAGATGGA+TGG | 0.555665 | 1_2:-58699238 | Msa0080440:intron |
| CCATGACTCTGATGAGTCAA+AGG | 0.556573 | 1_2:-58697181 | Msa0080440:CDS |
| ACCCCAACTACAGTGGAAAG+TGG | 0.558201 | 1_2:-58697886 | Msa0080440:CDS |
| TTGGCGGTGACACTCCCTAC+AGG | 0.559321 | 1_2:-58698834 | Msa0080440:intron |
| ATTATCAATCAAAATGCTGT+AGG | 0.565497 | 1_2:+58698547 | None:intergenic |
| TTGTTGTGTAGCCTGAGGAC+TGG | 0.566755 | 1_2:-58698082 | Msa0080440:intron |
| CAGCGATGAAACCAATAAAG+AGG | 0.572191 | 1_2:-58697142 | Msa0080440:CDS |
| CTTAGCATACTCGGGATCAT+CGG | 0.572247 | 1_2:+58697551 | None:intergenic |
| AGAAAAGAACGAGAGAGAGA+AGG | 0.573982 | 1_2:+58700203 | None:intergenic |
| ATACGATGACATTCCTAAAG+AGG | 0.576967 | 1_2:-58698195 | Msa0080440:CDS |
| GATATTATAAATCACCTGTA+GGG | 0.577404 | 1_2:+58698820 | None:intergenic |
| TCTCCCACCAAAGAAAATCA+AGG | 0.577520 | 1_2:-58698483 | Msa0080440:CDS |
| GTTGAATGCTAAAGATGGAT+GGG | 0.579079 | 1_2:-58699237 | Msa0080440:intron |
| CAGAAACTTGACTGTGGTGG+TGG | 0.579680 | 1_2:-58698898 | Msa0080440:CDS |
| GTTGATCAGAAGAAATTTGG+CGG | 0.581881 | 1_2:-58698850 | Msa0080440:CDS |
| AGAGGTGTAGTTCCACTCCC+CGG | 0.582515 | 1_2:+58699169 | None:intergenic |
| AACTCATTGTCAGGAAACAA+AGG | 0.583402 | 1_2:-58697259 | Msa0080440:intron |
| AGCTGAGAAGAAGAAAGAAG+AGG | 0.584374 | 1_2:-58697379 | Msa0080440:CDS |
| GGTTACATGAAGTTGCTTAG+CGG | 0.587170 | 1_2:-58698877 | Msa0080440:CDS |
| GCAAGTTGCTGAAGAAACAT+GGG | 0.587236 | 1_2:-58697529 | Msa0080440:CDS |
| TGCTGTAGGTTGCATCAGGA+CGG | 0.587388 | 1_2:+58698561 | None:intergenic |
| GACTGGGATGATGAGGAAGA+TGG | 0.589626 | 1_2:-58698065 | Msa0080440:CDS |
| AGCGAGCGATTCCATTGCAA+TGG | 0.589635 | 1_2:-58700248 | Msa0080440:exon |
| CCTTTGACTCATCAGAGTCA+TGG | 0.591313 | 1_2:+58697181 | None:intergenic |
| TGTTGGCATTGAATTGTGGC+AGG | 0.591537 | 1_2:-58697697 | Msa0080440:intron |
| GAAGGATGAGAACTTGGCCG+GGG | 0.593588 | 1_2:-58699186 | Msa0080440:CDS |
| TACTCTGGGTTGGCAATGGT+AGG | 0.604644 | 1_2:+58698029 | None:intergenic |
| TACACCTCTGGTCAATGGAA+TGG | 0.606107 | 1_2:-58699155 | Msa0080440:CDS |
| TGCCAACATACTTCAACTTG+GGG | 0.607807 | 1_2:+58697712 | None:intergenic |
| AAGATGGATGGGAAAGCCGG+TGG | 0.610833 | 1_2:-58699226 | Msa0080440:CDS |
| TGAGAAGAAGAAAGAAGAGG+AGG | 0.621039 | 1_2:-58697376 | Msa0080440:intron |
| GGTAAATTTGGTAATTTACG+TGG | 0.621247 | 1_2:+58700376 | None:intergenic |
| GCCTGAGGACTGGGATGATG+AGG | 0.621427 | 1_2:-58698072 | Msa0080440:CDS |
| CAACTACAGTGGAAAGTGGA+AGG | 0.622242 | 1_2:-58697882 | Msa0080440:CDS |
| TGGGGAAAACATAGATGTCA+GGG | 0.628802 | 1_2:+58697730 | None:intergenic |
| ATGTGTAAACATGAGTAAGC+TGG | 0.631281 | 1_2:+58698591 | None:intergenic |
| ATCAAGAACCCCAACTACAG+TGG | 0.637028 | 1_2:-58697893 | Msa0080440:CDS |
| ACCCAGAGTACAAGGGACCA+TGG | 0.641246 | 1_2:-58698016 | Msa0080440:CDS |
| GTAAGCTGGTCAGTCTCACA+AGG | 0.646980 | 1_2:+58698605 | None:intergenic |
| AGTATGTTGGCATTGAATTG+TGG | 0.647006 | 1_2:-58697701 | Msa0080440:CDS |
| ATGATGAGGAAGATGGTGAG+TGG | 0.647034 | 1_2:-58698058 | Msa0080440:CDS |
| AATGGTGACGCTAATGACAA+AGG | 0.650029 | 1_2:-58699137 | Msa0080440:intron |
| CAAGGGACCATGGAAGCCAA+AGG | 0.658097 | 1_2:-58698006 | Msa0080440:intron |
| TGATCCCGTTGATTCTGATG+CGG | 0.665412 | 1_2:-58697235 | Msa0080440:CDS |
| GCACCATTGATTGACAACCC+AGG | 0.669589 | 1_2:-58697860 | Msa0080440:intron |
| AAAGAAAATCAAGGACCCAG+AGG | 0.673165 | 1_2:-58698474 | Msa0080440:CDS |
| GTTCCCTGAATTCAGCAACA+AGG | 0.674436 | 1_2:-58698959 | Msa0080440:CDS |
| AGATGGATGGGAAAGCCGGT+GGG | 0.676998 | 1_2:-58699225 | Msa0080440:CDS |
| CCCTGAAGACAAGAAGCCAG+AGG | 0.683823 | 1_2:-58698310 | Msa0080440:intron |
| CAAGTTGCTGAAGAAACATG+GGG | 0.696192 | 1_2:-58697528 | Msa0080440:CDS |
| GTCACCATTCCATTGACCAG+AGG | 0.697163 | 1_2:+58699151 | None:intergenic |
| ATTGCCAACCCAGAGTACAA+GGG | 0.731176 | 1_2:-58698023 | Msa0080440:CDS |
| GAACAGAAACTTGACTGTGG+TGG | 0.776860 | 1_2:-58698901 | Msa0080440:CDS |
| CATGAACAGAAACTTGACTG+TGG | 0.796573 | 1_2:-58698904 | Msa0080440:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | ATGAAATGAAAAAAGAGATA+TGG | + | chr1_2:58697203-58697222 | None:intergenic | 20.0% |
| !! | ACATTCATGTTTGTAATTTA+TGG | - | chr1_2:58697255-58697274 | Msa0080440:intron | 20.0% |
| !! | AATTTGCAGTGATAATATTA+TGG | + | chr1_2:58697912-58697931 | None:intergenic | 20.0% |
| !! | ATGATTAGAAATTAGAAAGT+AGG | + | chr1_2:58698932-58698951 | None:intergenic | 20.0% |
| !! | ATAATATAATGAGAGATGAA+TGG | + | chr1_2:58699192-58699211 | None:intergenic | 20.0% |
| !! | ATTCATCTCTCATTATATTA+TGG | - | chr1_2:58699191-58699210 | Msa0080440:CDS | 20.0% |
| !! | TGATATATTGCAATATGTTT+AGG | - | chr1_2:58699354-58699373 | Msa0080440:intron | 20.0% |
| !!! | TTGATTTGTTTACTAACTTT+TGG | - | chr1_2:58699379-58699398 | Msa0080440:intron | 20.0% |
| ! | TGAAAAAAGAGATATGGAAA+TGG | + | chr1_2:58697197-58697216 | None:intergenic | 25.0% |
| !! | TGTGATTGAATTTTCATGAT+CGG | - | chr1_2:58697320-58697339 | Msa0080440:intron | 25.0% |
| ! | GGTTAATTAATCTTTGATCA+TGG | - | chr1_2:58697486-58697505 | Msa0080440:intron | 25.0% |
| ! | GGATTGTAAACAAAATGAAA+TGG | + | chr1_2:58697558-58697577 | None:intergenic | 25.0% |
| !! | CAATCCTTTTAATCTCATTT+CGG | - | chr1_2:58697572-58697591 | Msa0080440:CDS | 25.0% |
| ! | AAAACTAGCATTCTTTAATC+CGG | + | chr1_2:58697631-58697650 | None:intergenic | 25.0% |
| ! | AATTTGATCTAATCCAAACA+AGG | - | chr1_2:58697886-58697905 | Msa0080440:CDS | 25.0% |
| ! | ATACTAAATAAACTCGAACA+TGG | + | chr1_2:58697981-58698000 | None:intergenic | 25.0% |
| ! | TCAAAACACAAGTTAGAAAA+GGG | + | chr1_2:58698049-58698068 | None:intergenic | 25.0% |
| ! | ATCAAAACACAAGTTAGAAA+AGG | + | chr1_2:58698050-58698069 | None:intergenic | 25.0% |
| ! | ATTATGTTGAATGCTAAAGA+TGG | - | chr1_2:58698072-58698091 | Msa0080440:CDS | 25.0% |
| ! | ATAAAATCTGTAATCTTCAC+TGG | + | chr1_2:58698321-58698340 | None:intergenic | 25.0% |
| ! | GATATTATAAATCACCTGTA+GGG | + | chr1_2:58698497-58698516 | None:intergenic | 25.0% |
| ! | TGAAAGAGATAAAACTAGAA+GGG | + | chr1_2:58698519-58698538 | None:intergenic | 25.0% |
| !! | TAATTTTGCAGTATCATGTT+TGG | - | chr1_2:58698601-58698620 | Msa0080440:CDS | 25.0% |
| ! | ATTATCAATCAAAATGCTGT+AGG | + | chr1_2:58698770-58698789 | None:intergenic | 25.0% |
| ! | TACATAAAACAAAAGGAATC+TGG | + | chr1_2:58698907-58698926 | None:intergenic | 25.0% |
| ! | GTAGGAATACATAAAACAAA+AGG | + | chr1_2:58698914-58698933 | None:intergenic | 25.0% |
| ! | ATACAAAAGCTTAGAGTAAA+AGG | + | chr1_2:58699035-58699054 | None:intergenic | 25.0% |
| ! | TATCTAATACACAACATAGT+AGG | + | chr1_2:58699071-58699090 | None:intergenic | 25.0% |
| ! | TATATATTTACCAGACTTCA+AGG | - | chr1_2:58699557-58699576 | Msa0080440:intron | 25.0% |
| !! | TTTCTATTCACTCAATCTTT+TGG | - | chr1_2:58699831-58699850 | Msa0080440:intron | 25.0% |
| !!! | CCATTAAGTTTTATTCCTTA+AGG | + | chr1_2:58699857-58699876 | None:intergenic | 25.0% |
| ! | CCTTAAGGAATAAAACTTAA+TGG | - | chr1_2:58699854-58699873 | Msa0080440:intron | 25.0% |
| ! | GGTAAATTTGGTAATTTACG+TGG | + | chr1_2:58696941-58696960 | None:intergenic | 30.0% |
| AATTACACAACAATGCACAA+AGG | + | chr1_2:58697293-58697312 | None:intergenic | 30.0% | |
| !! | ATGTTGGTTTGAAAACGATT+TGG | - | chr1_2:58697452-58697471 | Msa0080440:intron | 30.0% |
| TCTTCCGAAATGAGATTAAA+AGG | + | chr1_2:58697579-58697598 | None:intergenic | 30.0% | |
| ACAATCAGTTCATTAAAAGC+TGG | + | chr1_2:58697730-58697749 | None:intergenic | 30.0% | |
| !! | GATAATATTATGGCCTTGTT+TGG | + | chr1_2:58697902-58697921 | None:intergenic | 30.0% |
| !!! | TTTCTTTCCTTTTTTCGTTG+AGG | - | chr1_2:58697950-58697969 | Msa0080440:intron | 30.0% |
| !! | AAGGGGAAAATATTGATTTG+AGG | + | chr1_2:58698031-58698050 | None:intergenic | 30.0% |
| CAAAACACAAGTTAGAAAAG+GGG | + | chr1_2:58698048-58698067 | None:intergenic | 30.0% | |
| AAACCAGCAACAATAAAACA+AGG | + | chr1_2:58698228-58698247 | None:intergenic | 30.0% | |
| TGAATTGAAAGATGATACTG+AGG | - | chr1_2:58698254-58698273 | Msa0080440:intron | 30.0% | |
| GATGTTGATCAGAAGAAATT+TGG | - | chr1_2:58698461-58698480 | Msa0080440:intron | 30.0% | |
| GGATATTATAAATCACCTGT+AGG | + | chr1_2:58698498-58698517 | None:intergenic | 30.0% | |
| GTGAAAGAGATAAAACTAGA+AGG | + | chr1_2:58698520-58698539 | None:intergenic | 30.0% | |
| !!! | CAGCATTTTGATTGATAATG+TGG | - | chr1_2:58698771-58698790 | Msa0080440:intron | 30.0% |
| ACTATAAACGTAGGTGAAAA+GGG | + | chr1_2:58698877-58698896 | None:intergenic | 30.0% | |
| AACTATAAACGTAGGTGAAA+AGG | + | chr1_2:58698878-58698897 | None:intergenic | 30.0% | |
| GGCAATTAAACTATAAACGT+AGG | + | chr1_2:58698886-58698905 | None:intergenic | 30.0% | |
| TCTGACATTCTGTATTTGTA+GGG | - | chr1_2:58699096-58699115 | Msa0080440:intron | 30.0% | |
| TAACTTCAACTGCAAAAACA+AGG | + | chr1_2:58699492-58699511 | None:intergenic | 30.0% | |
| ACTAAAATGCTCAAATCAAG+TGG | + | chr1_2:58699670-58699689 | None:intergenic | 30.0% | |
| ! | TTAATGGATGTTGATCTCTT+TGG | - | chr1_2:58699870-58699889 | Msa0080440:intron | 30.0% |
| !!! | AGTGAGCAAAAGTTTTATTC+CGG | - | chr1_2:58700336-58700355 | Msa0080440:five_prime_UTR | 30.0% |
| AAAAGATATAACTTCGACTC+CGG | + | chr1_2:58700358-58700377 | None:intergenic | 30.0% | |
| ! | ATTGTTTCTTTCAGTGCTGT+GGG | + | chr1_2:58696962-58696981 | None:intergenic | 35.0% |
| !!! | AACGATTTGGCACGTTTTTT+TGG | - | chr1_2:58697465-58697484 | Msa0080440:intron | 35.0% |
| TTTGAATTGTGTTGTGTGTC+CGG | - | chr1_2:58697609-58697628 | Msa0080440:intron | 35.0% | |
| TTTGTCTCTGTTTGTGTGTA+AGG | - | chr1_2:58697673-58697692 | Msa0080440:intron | 35.0% | |
| ATGCTATAAGCTGTGACTTA+CGG | + | chr1_2:58697858-58697877 | None:intergenic | 35.0% | |
| TGTTGAATGCTAAAGATGGA+TGG | - | chr1_2:58698076-58698095 | Msa0080440:intron | 35.0% | |
| GTTGAATGCTAAAGATGGAT+GGG | - | chr1_2:58698077-58698096 | Msa0080440:intron | 35.0% | |
| GGTAAAATCTGAATGGAAGA+AGG | - | chr1_2:58698110-58698129 | Msa0080440:intron | 35.0% | |
| !!! | CAACCTTGTTTTATTGTTGC+TGG | - | chr1_2:58698222-58698241 | Msa0080440:intron | 35.0% |
| TTGAAAGATGATACTGAGGT+TGG | - | chr1_2:58698258-58698277 | Msa0080440:intron | 35.0% | |
| CAAATGTTTGATATCTCCAC+AGG | - | chr1_2:58698287-58698306 | Msa0080440:intron | 35.0% | |
| TATCCTTGTTGCTGAATTCA+GGG | + | chr1_2:58698361-58698380 | None:intergenic | 35.0% | |
| TTATCCTTGTTGCTGAATTC+AGG | + | chr1_2:58698362-58698381 | None:intergenic | 35.0% | |
| GTTCATGCTTGACAGAAAAT+TGG | + | chr1_2:58698397-58698416 | None:intergenic | 35.0% | |
| GTTGATCAGAAGAAATTTGG+CGG | - | chr1_2:58698464-58698483 | Msa0080440:intron | 35.0% | |
| !!! | CAGAATAGCGTGTACTTTTT+TGG | + | chr1_2:58698650-58698669 | None:intergenic | 35.0% |
| ! | TAAGTGGTTTGTGTCATTGT+AGG | + | chr1_2:58698674-58698693 | None:intergenic | 35.0% |
| CACAAACCACTTAATCAAGA+AGG | - | chr1_2:58698681-58698700 | Msa0080440:intron | 35.0% | |
| GAACATCCTTCTTGATTAAG+TGG | + | chr1_2:58698690-58698709 | None:intergenic | 35.0% | |
| ATGTGTAAACATGAGTAAGC+TGG | + | chr1_2:58698726-58698745 | None:intergenic | 35.0% | |
| AATACTTACAGCCAGAAGAT+TGG | - | chr1_2:58698958-58698977 | Msa0080440:CDS | 35.0% | |
| ATACTTACAGCCAGAAGATT+GGG | - | chr1_2:58698959-58698978 | Msa0080440:CDS | 35.0% | |
| !! | AGAGTAAAAGGTATTACCTC+TGG | + | chr1_2:58699023-58699042 | None:intergenic | 35.0% |
| CTAATACACAACATAGTAGG+TGG | + | chr1_2:58699068-58699087 | None:intergenic | 35.0% | |
| CTCTGACATTCTGTATTTGT+AGG | - | chr1_2:58699095-58699114 | Msa0080440:intron | 35.0% | |
| ATACGATGACATTCCTAAAG+AGG | - | chr1_2:58699119-58699138 | Msa0080440:intron | 35.0% | |
| ! | TGGGAAACAACTAACCTTTT+TGG | + | chr1_2:58699160-58699179 | None:intergenic | 35.0% |
| AATAATTGTTGTGTAGCCTG+AGG | - | chr1_2:58699227-58699246 | Msa0080440:intron | 35.0% | |
| TTTCCACACAAACAAACCTT+TGG | + | chr1_2:58699327-58699346 | None:intergenic | 35.0% | |
| !!! | TAACTTTTGGTGTTACGTCT+TGG | - | chr1_2:58699392-58699411 | Msa0080440:intron | 35.0% |
| ATGCCAACATACTTCAACTT+GGG | + | chr1_2:58699606-58699625 | None:intergenic | 35.0% | |
| AATGCCAACATACTTCAACT+TGG | + | chr1_2:58699607-58699626 | None:intergenic | 35.0% | |
| ! | AGTATGTTGGCATTGAATTG+TGG | - | chr1_2:58699613-58699632 | Msa0080440:intron | 35.0% |
| TTAACTTTGCAGGTGAAATC+TGG | - | chr1_2:58699714-58699733 | Msa0080440:intron | 35.0% | |
| TGGTGAATATATGTTCTTGC+AGG | - | chr1_2:58699890-58699909 | Msa0080440:intron | 35.0% | |
| AACTTCCTTAACTCATTGTC+AGG | - | chr1_2:58700046-58700065 | Msa0080440:intron | 35.0% | |
| TGTTTCCTGACAATGAGTTA+AGG | + | chr1_2:58700054-58700073 | None:intergenic | 35.0% | |
| AACTCATTGTCAGGAAACAA+AGG | - | chr1_2:58700055-58700074 | Msa0080440:intron | 35.0% | |
| TTCAGTGCTGTGGGTAAATT+TGG | + | chr1_2:58696953-58696972 | None:intergenic | 40.0% | |
| ! | CATTGTTTCTTTCAGTGCTG+TGG | + | chr1_2:58696963-58696982 | None:intergenic | 40.0% |
| AATGAGAGTGAGAGCTACTT+TGG | + | chr1_2:58697028-58697047 | None:intergenic | 40.0% | |
| ATTCCATTGCAATGGCGATT+AGG | - | chr1_2:58697074-58697093 | Msa0080440:intron | 40.0% | |
| TTCCATTGCAATGGCGATTA+GGG | - | chr1_2:58697075-58697094 | Msa0080440:intron | 40.0% | |
| AGAAAAGAACGAGAGAGAGA+AGG | + | chr1_2:58697114-58697133 | None:intergenic | 40.0% | |
| CAAACCAACATCATCACGTT+CGG | + | chr1_2:58697443-58697462 | None:intergenic | 40.0% | |
| GGACTATCCTCAACGAAAAA+AGG | + | chr1_2:58697960-58697979 | None:intergenic | 40.0% | |
| ! | TCCATTCAGATTTTACCCAC+CGG | + | chr1_2:58698107-58698126 | None:intergenic | 40.0% |
| ATGGAAGAAGGATGAGAACT+TGG | - | chr1_2:58698122-58698141 | Msa0080440:intron | 40.0% | |
| ! | AATGGTGACGCTAATGACAA+AGG | - | chr1_2:58698177-58698196 | Msa0080440:CDS | 40.0% |
| !! | TTCACTGGTTTGAATACCTG+TGG | + | chr1_2:58698306-58698325 | None:intergenic | 40.0% |
| CATGAACAGAAACTTGACTG+TGG | - | chr1_2:58698410-58698429 | Msa0080440:intron | 40.0% | |
| GGTTACATGAAGTTGCTTAG+CGG | - | chr1_2:58698437-58698456 | Msa0080440:intron | 40.0% | |
| AGCTAACATGTGTCATGTCT+TGG | - | chr1_2:58698540-58698559 | Msa0080440:CDS | 40.0% | |
| ATGTTTGGTCCAGATATCTG+TGG | - | chr1_2:58698616-58698635 | Msa0080440:CDS | 40.0% | |
| GTACTGTAACCACAGATATC+TGG | + | chr1_2:58698628-58698647 | None:intergenic | 40.0% | |
| AAAATGCTGTAGGTTGCATC+AGG | + | chr1_2:58698760-58698779 | None:intergenic | 40.0% | |
| GATAATGTGGAGAAGCAAAC+TGG | - | chr1_2:58698784-58698803 | Msa0080440:intron | 40.0% | |
| TCTCCCACCAAAGAAAATCA+AGG | - | chr1_2:58698831-58698850 | Msa0080440:intron | 40.0% | |
| ! | GGTCCTTGATTTTCTTTGGT+GGG | + | chr1_2:58698837-58698856 | None:intergenic | 40.0% |
| ! | TCTGGGTCCTTGATTTTCTT+TGG | + | chr1_2:58698841-58698860 | None:intergenic | 40.0% |
| AAAGAAAATCAAGGACCCAG+AGG | - | chr1_2:58698840-58698859 | Msa0080440:CDS | 40.0% | |
| !!! | AGGTGAAAAGGGTACCTTTT+TGG | + | chr1_2:58698866-58698885 | None:intergenic | 40.0% |
| TCCTTATCATCCCAATCTTC+TGG | + | chr1_2:58698972-58698991 | None:intergenic | 40.0% | |
| !! | CAACTAACCTTTTTGGCATC+AGG | + | chr1_2:58699153-58699172 | None:intergenic | 40.0% |
| AGATGAATGGACACAGCAAT+GGG | + | chr1_2:58699179-58699198 | None:intergenic | 40.0% | |
| ! | AAACAAACCTTTGGCTTCCA+TGG | + | chr1_2:58699318-58699337 | None:intergenic | 40.0% |
| ! | AAGCCAAAGGTTTGTTTGTG+TGG | - | chr1_2:58699321-58699340 | Msa0080440:intron | 40.0% |
| TTCCACTTTCCACTGTAGTT+GGG | + | chr1_2:58699433-58699452 | None:intergenic | 40.0% | |
| AAACCTGGGTTGTCAATCAA+TGG | + | chr1_2:58699460-58699479 | None:intergenic | 40.0% | |
| CAAGGATGAAAAGCAAACCT+GGG | + | chr1_2:58699474-58699493 | None:intergenic | 40.0% | |
| ACAAGGATGAAAAGCAAACC+TGG | + | chr1_2:58699475-58699494 | None:intergenic | 40.0% | |
| TGGGGAAAACATAGATGTCA+GGG | + | chr1_2:58699587-58699606 | None:intergenic | 40.0% | |
| TTGGGGAAAACATAGATGTC+AGG | + | chr1_2:58699588-58699607 | None:intergenic | 40.0% | |
| ! | TTCCCCAAGTTGAAGTATGT+TGG | - | chr1_2:58699600-58699619 | Msa0080440:intron | 40.0% |
| TGCCAACATACTTCAACTTG+GGG | + | chr1_2:58699605-58699624 | None:intergenic | 40.0% | |
| ! | TGCAAAGTTAAGTAGCTTGC+TGG | + | chr1_2:58699705-58699724 | None:intergenic | 40.0% |
| AGCAAGCTACTTAACTTTGC+AGG | - | chr1_2:58699704-58699723 | Msa0080440:intron | 40.0% | |
| ! | AGCAACTTGCTTAGCATACT+CGG | + | chr1_2:58699775-58699794 | None:intergenic | 40.0% |
| AGCAAGTTGCTGAAGAAACA+TGG | - | chr1_2:58699784-58699803 | Msa0080440:intron | 40.0% | |
| GCAAGTTGCTGAAGAAACAT+GGG | - | chr1_2:58699785-58699804 | Msa0080440:intron | 40.0% | |
| CAAGTTGCTGAAGAAACATG+GGG | - | chr1_2:58699786-58699805 | Msa0080440:intron | 40.0% | |
| !!! | CACTCAATCTTTTGGCCTTA+AGG | - | chr1_2:58699839-58699858 | Msa0080440:intron | 40.0% |
| AGCTGAGAAGAAGAAAGAAG+AGG | - | chr1_2:58699935-58699954 | Msa0080440:intron | 40.0% | |
| TGAGAAGAAGAAAGAAGAGG+AGG | - | chr1_2:58699938-58699957 | Msa0080440:intron | 40.0% | |
| AGAGTCATGGCTAACTTCAT+TGG | + | chr1_2:58700123-58700142 | None:intergenic | 40.0% | |
| CAGCGATGAAACCAATAAAG+AGG | - | chr1_2:58700172-58700191 | Msa0080440:CDS | 40.0% | |
| ATGTACGTCGTCCTCTTTAT+TGG | + | chr1_2:58700186-58700205 | None:intergenic | 40.0% | |
| TCATCCTGCAAACAAAAGGA+GGG | + | chr1_2:58700280-58700299 | None:intergenic | 40.0% | |
| TAGGGAGTTTGCAAAGCATA+TGG | - | chr1_2:58700304-58700323 | Msa0080440:five_prime_UTR | 40.0% | |
| TGCAAAGCATATGGCATATG+CGG | - | chr1_2:58700313-58700332 | Msa0080440:five_prime_UTR | 40.0% | |
| AACCCTAATCGCCATTGCAA+TGG | + | chr1_2:58697080-58697099 | None:intergenic | 45.0% | |
| GAACGAGAGAGAGAAGGTTA+GGG | + | chr1_2:58697108-58697127 | None:intergenic | 45.0% | |
| AGAACGAGAGAGAGAAGGTT+AGG | + | chr1_2:58697109-58697128 | None:intergenic | 45.0% | |
| TGATCTGAACTGTCGTTGTC+TGG | - | chr1_2:58697395-58697414 | Msa0080440:CDS | 45.0% | |
| TAAGCACCTGTGAGACTCTA+TGG | - | chr1_2:58697779-58697798 | Msa0080440:intron | 45.0% | |
| GTTCTTCCATAGAGTCTCAC+AGG | + | chr1_2:58697788-58697807 | None:intergenic | 45.0% | |
| CTAAAGATGGATGGGAAAGC+CGG | - | chr1_2:58698085-58698104 | Msa0080440:intron | 45.0% | |
| AAGAAGGATGAGAACTTGGC+CGG | - | chr1_2:58698126-58698145 | Msa0080440:intron | 45.0% | |
| TACACCTCTGGTCAATGGAA+TGG | - | chr1_2:58698159-58698178 | Msa0080440:intron | 45.0% | |
| GTTCCCTGAATTCAGCAACA+AGG | - | chr1_2:58698355-58698374 | Msa0080440:intron | 45.0% | |
| GAACAGAAACTTGACTGTGG+TGG | - | chr1_2:58698413-58698432 | Msa0080440:intron | 45.0% | |
| CTGGTAGTCTTTACTCTGAC+TGG | - | chr1_2:58698803-58698822 | Msa0080440:intron | 45.0% | |
| ! | GGGTCCTTGATTTTCTTTGG+TGG | + | chr1_2:58698838-58698857 | None:intergenic | 45.0% |
| GCCAGAAGATTGGGATGATA+AGG | - | chr1_2:58698968-58698987 | Msa0080440:CDS | 45.0% | |
| TCAGGATCAGCAACCTCTTT+AGG | + | chr1_2:58699135-58699154 | None:intergenic | 45.0% | |
| TGCTGATCCTGATGCCAAAA+AGG | - | chr1_2:58699143-58699162 | Msa0080440:CDS | 45.0% | |
| GAGATGAATGGACACAGCAA+TGG | + | chr1_2:58699180-58699199 | None:intergenic | 45.0% | |
| ATGATGAGGAAGATGGTGAG+TGG | - | chr1_2:58699256-58699275 | Msa0080440:intron | 45.0% | |
| ATTGCCAACCCAGAGTACAA+GGG | - | chr1_2:58699291-58699310 | Msa0080440:intron | 45.0% | |
| ATCAAGAACCCCAACTACAG+TGG | - | chr1_2:58699421-58699440 | Msa0080440:intron | 45.0% | |
| TCCACTTTCCACTGTAGTTG+GGG | + | chr1_2:58699432-58699451 | None:intergenic | 45.0% | |
| CTTCCACTTTCCACTGTAGT+TGG | + | chr1_2:58699434-58699453 | None:intergenic | 45.0% | |
| CAACTACAGTGGAAAGTGGA+AGG | - | chr1_2:58699432-58699451 | Msa0080440:intron | 45.0% | |
| ! | TGTTGGCATTGAATTGTGGC+AGG | - | chr1_2:58699617-58699636 | Msa0080440:intron | 45.0% |
| CTTAGCATACTCGGGATCAT+CGG | + | chr1_2:58699766-58699785 | None:intergenic | 45.0% | |
| ! | GCAACTTGCTTAGCATACTC+GGG | + | chr1_2:58699774-58699793 | None:intergenic | 45.0% |
| AGAAACATGGGGCAAGCAAA+AGG | - | chr1_2:58699797-58699816 | Msa0080440:intron | 45.0% | |
| TATGTTCTTGCAGGCTGAGA+AGG | - | chr1_2:58699899-58699918 | Msa0080440:intron | 45.0% | |
| !! | TGATCCCGTTGATTCTGATG+CGG | - | chr1_2:58700079-58700098 | Msa0080440:intron | 45.0% |
| TCTTCCGCATCAGAATCAAC+GGG | + | chr1_2:58700086-58700105 | None:intergenic | 45.0% | |
| CTCTTCCGCATCAGAATCAA+CGG | + | chr1_2:58700087-58700106 | None:intergenic | 45.0% | |
| CCTTTGACTCATCAGAGTCA+TGG | + | chr1_2:58700136-58700155 | None:intergenic | 45.0% | |
| CCATGACTCTGATGAGTCAA+AGG | - | chr1_2:58700133-58700152 | Msa0080440:intron | 45.0% | |
| !! | TTTCCCCTCCTTTTGTTTGC+AGG | - | chr1_2:58700273-58700292 | Msa0080440:five_prime_UTR | 45.0% |
| CATCCTGCAAACAAAAGGAG+GGG | + | chr1_2:58700279-58700298 | None:intergenic | 45.0% | |
| CTCATCCTGCAAACAAAAGG+AGG | + | chr1_2:58700281-58700300 | None:intergenic | 45.0% | |
| GAGCTCATCCTGCAAACAAA+AGG | + | chr1_2:58700284-58700303 | None:intergenic | 45.0% | |
| TTGTTTGCAGGATGAGCTCT+AGG | - | chr1_2:58700285-58700304 | Msa0080440:five_prime_UTR | 45.0% | |
| TGTTTGCAGGATGAGCTCTA+GGG | - | chr1_2:58700286-58700305 | Msa0080440:five_prime_UTR | 45.0% | |
| AGCGAGCGATTCCATTGCAA+TGG | - | chr1_2:58697066-58697085 | Msa0080440:intron | 50.0% | |
| CGCAGAAGCGATGGATAGAA+GGG | + | chr1_2:58697137-58697156 | None:intergenic | 50.0% | |
| TCGCAGAAGCGATGGATAGA+AGG | + | chr1_2:58697138-58697157 | None:intergenic | 50.0% | |
| TCTATCCATCGCTTCTGCGA+AGG | - | chr1_2:58697138-58697157 | Msa0080440:CDS | 50.0% | |
| GAAAACCTTCGCAGAAGCGA+TGG | + | chr1_2:58697146-58697165 | None:intergenic | 50.0% | |
| !! | TTCTTCGAAGAGCGCTTCGA+AGG | - | chr1_2:58697163-58697182 | Msa0080440:CDS | 50.0% |
| ! | TGCACCGAACGTGATGATGT+TGG | - | chr1_2:58697436-58697455 | Msa0080440:intron | 50.0% |
| GCCGGTGGGTAAAATCTGAA+TGG | - | chr1_2:58698103-58698122 | Msa0080440:intron | 50.0% | |
| AGAAGGATGAGAACTTGGCC+GGG | - | chr1_2:58698127-58698146 | Msa0080440:intron | 50.0% | |
| GGAACTACACCTCTGGTCAA+TGG | - | chr1_2:58698154-58698173 | Msa0080440:intron | 50.0% | |
| GTCACCATTCCATTGACCAG+AGG | + | chr1_2:58698166-58698185 | None:intergenic | 50.0% | |
| TTCAGGGAACTCAGCAGAGA+TGG | + | chr1_2:58698345-58698364 | None:intergenic | 50.0% | |
| CAGAAACTTGACTGTGGTGG+TGG | - | chr1_2:58698416-58698435 | Msa0080440:intron | 50.0% | |
| GTAAGCTGGTCAGTCTCACA+AGG | + | chr1_2:58698712-58698731 | None:intergenic | 50.0% | |
| TGCTGTAGGTTGCATCAGGA+CGG | + | chr1_2:58698756-58698775 | None:intergenic | 50.0% | |
| !! | AGGGTACCTTTTTGGCCTCT+GGG | + | chr1_2:58698858-58698877 | None:intergenic | 50.0% |
| !!! | AAGGGTACCTTTTTGGCCTC+TGG | + | chr1_2:58698859-58698878 | None:intergenic | 50.0% |
| ! | CCTCTGGCTTCTTGTCTTCA+GGG | + | chr1_2:58699007-58699026 | None:intergenic | 50.0% |
| ! | ACCTCTGGCTTCTTGTCTTC+AGG | + | chr1_2:58699008-58699027 | None:intergenic | 50.0% |
| TTGTTGTGTAGCCTGAGGAC+TGG | - | chr1_2:58699232-58699251 | Msa0080440:intron | 50.0% | |
| TGTTGTGTAGCCTGAGGACT+GGG | - | chr1_2:58699233-58699252 | Msa0080440:intron | 50.0% | |
| GACTGGGATGATGAGGAAGA+TGG | - | chr1_2:58699249-58699268 | Msa0080440:intron | 50.0% | |
| !! | TACTCTGGGTTGGCAATGGT+AGG | + | chr1_2:58699288-58699307 | None:intergenic | 50.0% |
| !! | CTTGTACTCTGGGTTGGCAA+TGG | + | chr1_2:58699292-58699311 | None:intergenic | 50.0% |
| CATTGCCAACCCAGAGTACA+AGG | - | chr1_2:58699290-58699309 | Msa0080440:intron | 50.0% | |
| TCCATGGTCCCTTGTACTCT+GGG | + | chr1_2:58699302-58699321 | None:intergenic | 50.0% | |
| TTCCATGGTCCCTTGTACTC+TGG | + | chr1_2:58699303-58699322 | None:intergenic | 50.0% | |
| ACCCCAACTACAGTGGAAAG+TGG | - | chr1_2:58699428-58699447 | Msa0080440:intron | 50.0% | |
| ! | GCACCATTGATTGACAACCC+AGG | - | chr1_2:58699454-58699473 | Msa0080440:intron | 50.0% |
| !! | GTAGCTTGCTGGTCAGAGTT+TGG | + | chr1_2:58699694-58699713 | None:intergenic | 50.0% |
| !! | CGTTGATTCTGATGCGGAAG+AGG | - | chr1_2:58700085-58700104 | Msa0080440:intron | 50.0% |
| TTCTGATGCGGAAGAGGATG+AGG | - | chr1_2:58700091-58700110 | Msa0080440:intron | 50.0% | |
| GATGAGTCAAAGGCAGAAGC+TGG | - | chr1_2:58700143-58700162 | Msa0080440:intron | 50.0% | |
| AAGATGGATGGGAAAGCCGG+TGG | - | chr1_2:58698088-58698107 | Msa0080440:intron | 55.0% | |
| AGATGGATGGGAAAGCCGGT+GGG | - | chr1_2:58698089-58698108 | Msa0080440:intron | 55.0% | |
| GAAGGATGAGAACTTGGCCG+GGG | - | chr1_2:58698128-58698147 | Msa0080440:intron | 55.0% | |
| ! | AGAGGTGTAGTTCCACTCCC+CGG | + | chr1_2:58698148-58698167 | None:intergenic | 55.0% |
| CAAGGACCCAGAGGCCAAAA+AGG | - | chr1_2:58698849-58698868 | Msa0080440:CDS | 55.0% | |
| GGCTTCTTGTCTTCAGGGTC+AGG | + | chr1_2:58699002-58699021 | None:intergenic | 55.0% | |
| CCCTGAAGACAAGAAGCCAG+AGG | - | chr1_2:58699004-58699023 | Msa0080440:CDS | 55.0% | |
| TCCTCATCATCCCAGTCCTC+AGG | + | chr1_2:58699246-58699265 | None:intergenic | 55.0% | |
| TGGTCCCTTGTACTCTGGGT+TGG | + | chr1_2:58699298-58699317 | None:intergenic | 55.0% | |
| ACCCAGAGTACAAGGGACCA+TGG | - | chr1_2:58699298-58699317 | Msa0080440:intron | 55.0% | |
| CAAGGGACCATGGAAGCCAA+AGG | - | chr1_2:58699308-58699327 | Msa0080440:intron | 55.0% | |
| TCAGGGTCGTCCTTGAAGTC+TGG | + | chr1_2:58699570-58699589 | None:intergenic | 55.0% | |
| ATGAGAACTTGGCCGGGGAG+TGG | - | chr1_2:58698133-58698152 | Msa0080440:intron | 60.0% | |
| GGGGAGTGGAACTACACCTC+TGG | - | chr1_2:58698147-58698166 | Msa0080440:intron | 60.0% | |
| TTGGCGGTGACACTCCCTAC+AGG | - | chr1_2:58698480-58698499 | Msa0080440:CDS | 60.0% | |
| GCCTGAGGACTGGGATGATG+AGG | - | chr1_2:58699242-58699261 | Msa0080440:intron | 60.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr1_2 | gene | 58696925 | 58700411 | 58696925 | ID=Msa0080440;Name=Msa0080440 |
| chr1_2 | mRNA | 58696925 | 58700411 | 58696925 | ID=Msa0080440-mRNA-1;Parent=Msa0080440;Name=Msa0080440-mRNA-1;_AED=0.20;_eAED=0.21;_QI=160|0.76|0.71|1|1|1|14|0|430 |
| chr1_2 | exon | 58696925 | 58696942 | 58696925 | ID=Msa0080440-mRNA-1:exon:18929;Parent=Msa0080440-mRNA-1 |
| chr1_2 | exon | 58697131 | 58697268 | 58697131 | ID=Msa0080440-mRNA-1:exon:18928;Parent=Msa0080440-mRNA-1 |
| chr1_2 | exon | 58697377 | 58697424 | 58697377 | ID=Msa0080440-mRNA-1:exon:18927;Parent=Msa0080440-mRNA-1 |
| chr1_2 | exon | 58697515 | 58697610 | 58697515 | ID=Msa0080440-mRNA-1:exon:18926;Parent=Msa0080440-mRNA-1 |
| chr1_2 | exon | 58697698 | 58697765 | 58697698 | ID=Msa0080440-mRNA-1:exon:18925;Parent=Msa0080440-mRNA-1 |
| chr1_2 | exon | 58697861 | 58697960 | 58697861 | ID=Msa0080440-mRNA-1:exon:18924;Parent=Msa0080440-mRNA-1 |
| chr1_2 | exon | 58698007 | 58698093 | 58698007 | ID=Msa0080440-mRNA-1:exon:18923;Parent=Msa0080440-mRNA-1 |
| chr1_2 | exon | 58698172 | 58698219 | 58698172 | ID=Msa0080440-mRNA-1:exon:18922;Parent=Msa0080440-mRNA-1 |
| chr1_2 | exon | 58698311 | 58698367 | 58698311 | ID=Msa0080440-mRNA-1:exon:18921;Parent=Msa0080440-mRNA-1 |
| chr1_2 | exon | 58698466 | 58698691 | 58698466 | ID=Msa0080440-mRNA-1:exon:18920;Parent=Msa0080440-mRNA-1 |
| chr1_2 | exon | 58698719 | 58698724 | 58698719 | ID=Msa0080440-mRNA-1:exon:18919;Parent=Msa0080440-mRNA-1 |
| chr1_2 | exon | 58698835 | 58699027 | 58698835 | ID=Msa0080440-mRNA-1:exon:18918;Parent=Msa0080440-mRNA-1 |
| chr1_2 | exon | 58699138 | 58699245 | 58699138 | ID=Msa0080440-mRNA-1:exon:18917;Parent=Msa0080440-mRNA-1 |
| chr1_2 | exon | 58700152 | 58700411 | 58700152 | ID=Msa0080440-mRNA-1:exon:18916;Parent=Msa0080440-mRNA-1 |
| chr1_2 | five_prime_UTR | 58700252 | 58700411 | 58700252 | ID=Msa0080440-mRNA-1:five_prime_utr;Parent=Msa0080440-mRNA-1 |
| chr1_2 | CDS | 58700152 | 58700251 | 58700152 | ID=Msa0080440-mRNA-1:cds;Parent=Msa0080440-mRNA-1 |
| chr1_2 | CDS | 58699138 | 58699245 | 58699138 | ID=Msa0080440-mRNA-1:cds;Parent=Msa0080440-mRNA-1 |
| chr1_2 | CDS | 58698835 | 58699027 | 58698835 | ID=Msa0080440-mRNA-1:cds;Parent=Msa0080440-mRNA-1 |
| chr1_2 | CDS | 58698719 | 58698724 | 58698719 | ID=Msa0080440-mRNA-1:cds;Parent=Msa0080440-mRNA-1 |
| chr1_2 | CDS | 58698466 | 58698691 | 58698466 | ID=Msa0080440-mRNA-1:cds;Parent=Msa0080440-mRNA-1 |
| chr1_2 | CDS | 58698311 | 58698367 | 58698311 | ID=Msa0080440-mRNA-1:cds;Parent=Msa0080440-mRNA-1 |
| chr1_2 | CDS | 58698172 | 58698219 | 58698172 | ID=Msa0080440-mRNA-1:cds;Parent=Msa0080440-mRNA-1 |
| chr1_2 | CDS | 58698007 | 58698093 | 58698007 | ID=Msa0080440-mRNA-1:cds;Parent=Msa0080440-mRNA-1 |
| chr1_2 | CDS | 58697861 | 58697960 | 58697861 | ID=Msa0080440-mRNA-1:cds;Parent=Msa0080440-mRNA-1 |
| chr1_2 | CDS | 58697698 | 58697765 | 58697698 | ID=Msa0080440-mRNA-1:cds;Parent=Msa0080440-mRNA-1 |
| chr1_2 | CDS | 58697515 | 58697610 | 58697515 | ID=Msa0080440-mRNA-1:cds;Parent=Msa0080440-mRNA-1 |
| chr1_2 | CDS | 58697377 | 58697424 | 58697377 | ID=Msa0080440-mRNA-1:cds;Parent=Msa0080440-mRNA-1 |
| chr1_2 | CDS | 58697131 | 58697268 | 58697131 | ID=Msa0080440-mRNA-1:cds;Parent=Msa0080440-mRNA-1 |
| chr1_2 | CDS | 58696925 | 58696942 | 58696925 | ID=Msa0080440-mRNA-1:cds;Parent=Msa0080440-mRNA-1 |
| Gene Sequence |
| Protein sequence |
