AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar zhongmu-4 / Msa0631950

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0631950 MtrunA17_Chr4g0009831 95.875 800 20 3 1 800 1 787 0.0 1560
Msa0631950 MtrunA17_Chr8g0370231 25.127 394 249 10 395 746 470 859 1.43e-20 97.4
Msa0631950 MtrunA17_Chr5g0424181 25.138 362 203 10 394 692 507 863 1.08e-15 82.0
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0631950 AT5G02250.1 64.756 820 249 7 1 798 2 803 0.0 1013
Msa0631950 AT2G17510.1 25.500 400 240 13 395 746 469 858 4.54e-24 108
Msa0631950 AT2G17510.2 25.123 406 246 13 395 746 536 937 1.43e-20 97.8
Msa0631950 AT1G77680.1 32.576 132 89 0 395 526 476 607 1.48e-12 72.0

Find 216 sgRNAs with CRISPR-Local

Find 823 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
AAAGGATTGCGTTGCGTTTA+TGG 0.091964 4_3:+15424410 Msa0631950:CDS
CTCTCCCATCCGTAGATATT+TGG 0.150105 4_3:+15431096 Msa0631950:CDS
CAGCTTTAAATGATGAATTT+TGG 0.168020 4_3:-15433662 None:intergenic
GCCAGCACGCCACGGGGTTT+TGG 0.196686 4_3:+15431048 Msa0631950:CDS
GCACGGTATCTTCTCTCTTT+TGG 0.229092 4_3:-15432201 None:intergenic
CTGCAAATCTTCGGTTAAAT+TGG 0.237762 4_3:+15429910 Msa0631950:CDS
TCCTAAAGTTGTTACTATAT+TGG 0.244553 4_3:+15434252 Msa0631950:three_prime_UTR
CTCATCCTTCCACGAAGATT+TGG 0.265456 4_3:-15426281 None:intergenic
GGACCTTCTTGCTCATTATC+AGG 0.293979 4_3:+15431117 Msa0631950:CDS
TTTCACATGTTTAGATTAAC+AGG 0.295584 4_3:+15428524 Msa0631950:intron
GGAAGGATGAGGAGAAAATT+TGG 0.297565 4_3:+15426293 Msa0631950:CDS
TGTTTCGATCATAGTGGATA+TGG 0.303278 4_3:+15434146 Msa0631950:three_prime_UTR
CCAACAGTAGTCTCCGTTAC+TGG 0.304352 4_3:+15432154 Msa0631950:CDS
CACATTACAATATACATTCT+TGG 0.312391 4_3:-15434029 None:intergenic
GTGCAGCTGAAATTGATTTC+AGG 0.320002 4_3:+15431023 Msa0631950:CDS
GTGAAGCGTTCCTTGCAAAA+AGG 0.320722 4_3:+15423713 Msa0631950:CDS
TTAAATACAGAAGAACTTCT+AGG 0.321095 4_3:-15433517 None:intergenic
AAGCTCCTAACAGGCCCTTC+TGG 0.330580 4_3:-15430980 None:intergenic
TCAGAGACTAATCGCATTGC+AGG 0.338662 4_3:-15430842 None:intergenic
GATATCTGCTTGGTCAAAAT+TGG 0.344009 4_3:-15424022 None:intergenic
CAGATAAAGGCATTTCTTAG+AGG 0.347763 4_3:+15432048 Msa0631950:intron
CGAAGAAGAAGAAGCGTTAA+CGG 0.350785 4_3:-15421442 None:intergenic
ATGGAAGCGGAGAACGGAGG+GGG 0.357895 4_3:-15421304 None:intergenic
TCCAATATAGTAACAACTTT+AGG 0.363143 4_3:-15434253 None:intergenic
CTTGCAGATACTAAAGGAAA+TGG 0.367872 4_3:+15426868 Msa0631950:intron
CCCAGTCAGCTTGGCTAGTT+CGG 0.370832 4_3:+15433595 Msa0631950:three_prime_UTR
CATCACTACTTGAATTTGCT+TGG 0.374236 4_3:+15424171 Msa0631950:CDS
GACCTGATGGCAAGAAGAAC+TGG 0.375215 4_3:+15423792 Msa0631950:CDS
AGAAGGTTTCAGAGGTTCAT+TGG 0.379321 4_3:-15421184 None:intergenic
CATCAATGGCATAGACCTTC+AGG 0.382711 4_3:-15428561 None:intergenic
TCTACATAAAGGTTTATTGA+TGG 0.385755 4_3:-15430806 None:intergenic
TAAGTTCAACCTCCTCTTCA+AGG 0.387057 4_3:-15429872 None:intergenic
AGGGGATGAAGTAGTGGTTA+AGG 0.387235 4_3:+15433392 Msa0631950:CDS
AAACCTTTATGTAGAAAATC+AGG 0.389129 4_3:+15430814 Msa0631950:CDS
GAACTGGATGGTTTCAGATC+AGG 0.391570 4_3:+15423808 Msa0631950:CDS
GGCGGTGTGGGGAGAAGAAG+CGG 0.392300 4_3:-15421278 None:intergenic
TGATGGAGCGAGTTTGAGTA+TGG 0.393873 4_3:-15421353 None:intergenic
TGTCACTTGTTGTGGCTTGA+TGG 0.394461 4_3:-15423980 None:intergenic
ATTGATGGCTCTGGATCCTC+TGG 0.396536 4_3:-15430791 None:intergenic
ATCCAGTTCTTCTTGCCATC+AGG 0.396705 4_3:-15423794 None:intergenic
ATCTTCCAGAAGGGCCTGTT+AGG 0.398842 4_3:+15430975 Msa0631950:CDS
GGATGGAAGCGGAGAACGGA+GGG 0.400009 4_3:-15421306 None:intergenic
AGAGAGAAGGGGAGGAAGGA+CGG 0.400881 4_3:-15421245 None:intergenic
AAGATGGTCGGATTAACATT+TGG 0.401203 4_3:+15428733 Msa0631950:CDS
TGCAGCTCTGTTGTTGGTTG+AGG 0.401220 4_3:+15432254 Msa0631950:CDS
TTTCTTGCGGAGTTTACGTT+TGG 0.402649 4_3:-15421412 None:intergenic
CCCAAAACCCCGTGGCGTGC+TGG 0.403412 4_3:-15431049 None:intergenic
TTGGATTTCAAGCTACTGCT+TGG 0.404806 4_3:+15433349 Msa0631950:CDS
GACTGTGGAGAGAGAAGGGG+AGG 0.404956 4_3:-15421253 None:intergenic
TTTAAGATGGTCTCTAATAG+AGG 0.405598 4_3:+15433835 Msa0631950:three_prime_UTR
ACTAGGGCAAAGCTCCTAAC+AGG 0.406665 4_3:-15430989 None:intergenic
ACATTACAATATACATTCTT+GGG 0.408147 4_3:-15434028 None:intergenic
TGGATTTCAAGCTACTGCTT+GGG 0.414963 4_3:+15433350 Msa0631950:CDS
TGGAAGCGGAGAACGGAGGG+GGG 0.416505 4_3:-15421303 None:intergenic
TACCTATCCACAATACTTCC+AGG 0.417222 4_3:-15428789 None:intergenic
TAAAGGTTTATTGATGGCTC+TGG 0.421693 4_3:-15430800 None:intergenic
AAGCCTCTTCGAAACCGTTA+TGG 0.421825 4_3:+15421377 Msa0631950:CDS
AGGATGGAAGCGGAGAACGG+AGG 0.427259 4_3:-15421307 None:intergenic
ATTTCAACAAGTTGTTCAAA+AGG 0.432475 4_3:+15433487 Msa0631950:three_prime_UTR
GTTAAATTGGCGCCGCCAGC+AGG 0.432558 4_3:+15429923 Msa0631950:CDS
GGCGAAGCTATAGCTACATT+TGG 0.436547 4_3:+15430881 Msa0631950:CDS
CATAGACCTTCAGGTTAGTA+AGG 0.437715 4_3:-15428552 None:intergenic
AAATCAAGATTGACATGTAT+AGG 0.439477 4_3:-15426947 None:intergenic
ACCGAACTAGCCAAGCTGAC+TGG 0.447772 4_3:-15433596 None:intergenic
GTCTCAGTTGGATCACAGAT+AGG 0.448663 4_3:+15433372 Msa0631950:CDS
TCAGGAAGCCAGCACGCCAC+GGG 0.449427 4_3:+15431041 Msa0631950:CDS
GATGGAAGCGGAGAACGGAG+GGG 0.452529 4_3:-15421305 None:intergenic
TCGCATTGCAGCTCTGTTGT+TGG 0.452884 4_3:+15432248 Msa0631950:CDS
TAACAGGCCCTTCTGGAAGA+TGG 0.456437 4_3:-15430973 None:intergenic
TGAGGAGCTTATTCGTAGAA+AGG 0.460349 4_3:+15426171 Msa0631950:CDS
CGGTGTGGGGAGAAGAAGCG+GGG 0.460872 4_3:-15421276 None:intergenic
TTCATTAGATGTTAGAGAGT+GGG 0.465341 4_3:+15433968 Msa0631950:three_prime_UTR
GTTATTTGTTTCGATCATAG+TGG 0.465889 4_3:+15434140 Msa0631950:three_prime_UTR
ATAACATTCCTTTACCCTAC+AGG 0.466109 4_3:+15430912 Msa0631950:CDS
CAAGTGACATATATTGTTCC+CGG 0.469433 4_3:+15423994 Msa0631950:CDS
ACAACTTGTTGAAATTGAAA+AGG 0.469508 4_3:-15433479 None:intergenic
GCGGTGTGGGGAGAAGAAGC+GGG 0.471372 4_3:-15421277 None:intergenic
GGGGACTGTGGAGAGAGAAG+GGG 0.472912 4_3:-15421256 None:intergenic
GAAAGATTTATATCTGATTG+AGG 0.479892 4_3:-15430941 None:intergenic
CCGAACTAGCCAAGCTGACT+GGG 0.481253 4_3:-15433595 None:intergenic
AGGAGGGAGGAGGATGGAAG+CGG 0.481855 4_3:-15421317 None:intergenic
GTTAATAATGGGCAAACTAT+CGG 0.483393 4_3:-15433810 None:intergenic
TTGAGTATGGCAGACATAGC+AGG 0.484167 4_3:-15421340 None:intergenic
TGTCTGAGGCTGCAAATCTT+CGG 0.486597 4_3:+15429901 Msa0631950:CDS
GAGCCGCCACCCTTTACATC+TGG 0.489751 4_3:+15432072 Msa0631950:CDS
ATGCTTCTTGCAGATACTAA+AGG 0.494187 4_3:+15426862 Msa0631950:intron
CAAGCAAATTCAAGTAGTGA+TGG 0.494516 4_3:-15424170 None:intergenic
TTCGAGATTACCAGATGTAA+AGG 0.496296 4_3:-15432082 None:intergenic
ATAAACCTTCCAAATCTTCG+TGG 0.496392 4_3:+15426272 Msa0631950:CDS
GCTCGAACAGCCATTGAAGA+AGG 0.497086 4_3:-15421201 None:intergenic
ACAATATATGTCACTTGTTG+TGG 0.497382 4_3:-15423988 None:intergenic
AGGAGGATGGAAGCGGAGAA+CGG 0.497568 4_3:-15421310 None:intergenic
TTACTGAAAATTCATGGCTG+AGG 0.498053 4_3:+15433901 Msa0631950:three_prime_UTR
TGCAGTGGCATAAAGTTAGC+AGG 0.498419 4_3:+15433775 Msa0631950:three_prime_UTR
TTGGTCAAAATTGGATATGC+CGG 0.499648 4_3:-15424013 None:intergenic
CAAATCTTCGTGGAAGGATG+AGG 0.500601 4_3:+15426282 Msa0631950:CDS
TACTGAAAATTCATGGCTGA+GGG 0.500883 4_3:+15433902 Msa0631950:three_prime_UTR
CTATAGCTACATTTGGATCT+CGG 0.500967 4_3:+15430888 Msa0631950:CDS
GCTACTGCTTGGGTCTCAGT+TGG 0.501138 4_3:+15433360 Msa0631950:CDS
TATTATGCTCTGCAAAATCA+AGG 0.504435 4_3:+15426239 Msa0631950:CDS
ACCTCTGAAACCTTCTTCAA+TGG 0.504690 4_3:+15421191 Msa0631950:exon
GAAGTGCGATCACGCTTCAC+TGG 0.504802 4_3:+15433639 Msa0631950:three_prime_UTR
TTGCAGATACTAAAGGAAAT+GGG 0.505523 4_3:+15426869 Msa0631950:intron
AATACATCTACCTGCTCACT+TGG 0.505938 4_3:-15424440 None:intergenic
ATTCATTAGATGTTAGAGAG+TGG 0.506772 4_3:+15433967 Msa0631950:three_prime_UTR
TGTAGTAATGCATTGCCAAA+AGG 0.510342 4_3:+15433862 Msa0631950:three_prime_UTR
GAGAATTCCCACTGATCACT+TGG 0.511382 4_3:+15426979 Msa0631950:CDS
GGCTTGAAGTTCTTCCATAA+CGG 0.511715 4_3:-15421391 None:intergenic
GATACTAAAGGAAATGGGTC+TGG 0.515799 4_3:+15426874 Msa0631950:intron
TCTCAGTTGGATCACAGATA+GGG 0.517800 4_3:+15433373 Msa0631950:CDS
CGATATTATTTATGTGAAGG+AGG 0.518913 4_3:+15433437 Msa0631950:CDS
AACAGGCCCTTCTGGAAGAT+GGG 0.523166 4_3:-15430972 None:intergenic
ATCAGCTTCATCAACATCAA+TGG 0.525986 4_3:-15428575 None:intergenic
GATGAACAAAGGAAAACAGC+TGG 0.530150 4_3:+15426364 Msa0631950:CDS
AACATAGAATATGTAGCAGT+GGG 0.531882 4_3:-15428923 None:intergenic
GGTTGTCCCCTGTAGGGTAA+AGG 0.533718 4_3:-15430920 None:intergenic
CCAGTAACGGAGACTACTGT+TGG 0.534199 4_3:-15432154 None:intergenic
ATCTCTTCCAAGTGATCAGT+GGG 0.536634 4_3:-15426986 None:intergenic
TCGAGATTACCAGATGTAAA+GGG 0.539275 4_3:-15432081 None:intergenic
CAATTTGAACCTTGAAGAGG+AGG 0.541680 4_3:+15429863 Msa0631950:CDS
TTGGAAGGTTTATCATGTGA+AGG 0.541805 4_3:-15426262 None:intergenic
TTCAGGAAGCCAGCACGCCA+CGG 0.541815 4_3:+15431040 Msa0631950:CDS
CTGCACGCATTATCTTGACT+AGG 0.542237 4_3:-15431006 None:intergenic
TGGTCAAAATTGGATATGCC+GGG 0.542295 4_3:-15424012 None:intergenic
AGCAGGAGGAGGGAGGAGGA+TGG 0.544384 4_3:-15421323 None:intergenic
TGATTGAGGTTGTCCCCTGT+AGG 0.545539 4_3:-15430927 None:intergenic
GTGGAGAGAGAAGGGGAGGA+AGG 0.548546 4_3:-15421249 None:intergenic
GTTTCCAGAAAATCTTGCCA+TGG 0.550462 4_3:+15428943 Msa0631950:CDS
CAAGAAGGTCCAAATATCTA+CGG 0.550736 4_3:-15431105 None:intergenic
ATGGCAGACATAGCAGGAGG+AGG 0.552076 4_3:-15421334 None:intergenic
AAGCTGACTGGGAGTTAACA+AGG 0.553738 4_3:-15433584 None:intergenic
ACATAGCAGGAGGAGGGAGG+AGG 0.554449 4_3:-15421327 None:intergenic
TGGACCTCGACCAAGTGAGC+AGG 0.555090 4_3:+15424430 Msa0631950:CDS
AAGGTCCAAATATCTACGGA+TGG 0.556668 4_3:-15431101 None:intergenic
TCAGTTGTGCTGCATGATGA+TGG 0.557662 4_3:+15429013 Msa0631950:CDS
TAACATTCCTTTACCCTACA+GGG 0.558376 4_3:+15430913 Msa0631950:CDS
GATTGAGGTTGTCCCCTGTA+GGG 0.558678 4_3:-15430926 None:intergenic
GTCCGTGACAGTTGAAGAGA+TGG 0.560062 4_3:+15424217 Msa0631950:CDS
TGACGATATTATTTATGTGA+AGG 0.560650 4_3:+15433434 Msa0631950:CDS
TATGTGAAGGAGGTTGTAAG+AGG 0.562265 4_3:+15433447 Msa0631950:CDS
TTGTTAACTCCCAGTCAGCT+TGG 0.567357 4_3:+15433586 Msa0631950:three_prime_UTR
TGTTCAACCTGGAAGTATTG+TGG 0.567891 4_3:+15428782 Msa0631950:CDS
TTTCCAGAAAATCTTGCCAT+GGG 0.567903 4_3:+15428944 Msa0631950:CDS
AATCTCGAAGGTCTAGCAGC+AGG 0.568622 4_3:+15432096 Msa0631950:CDS
GTAACAACTTTAGGAATCGC+AGG 0.568955 4_3:-15434244 None:intergenic
GCCATTGAAGAAGGTTTCAG+AGG 0.572728 4_3:-15421192 None:intergenic
CAAATATCTACGGATGGGAG+AGG 0.574656 4_3:-15431095 None:intergenic
TTACCAGATGTAAAGGGTGG+CGG 0.577730 4_3:-15432075 None:intergenic
TCCTTCCACGAAGATTTGGA+AGG 0.578547 4_3:-15426277 None:intergenic
CAAAATGTGCGATATCTGCT+TGG 0.581110 4_3:-15424032 None:intergenic
AGCTATGAGTGAGTGAAGGT+AGG 0.581434 4_3:-15421161 None:intergenic
TGGCAGACATAGCAGGAGGA+GGG 0.584113 4_3:-15421333 None:intergenic
ACCTTCCAAATCTTCGTGGA+AGG 0.584512 4_3:+15426276 Msa0631950:CDS
AGCCATCTCTTCAACTGTCA+CGG 0.584978 4_3:-15424219 None:intergenic
GAGAAGGGGAGGAAGGACGG+AGG 0.591969 4_3:-15421242 None:intergenic
ACTCAATTTGAACCTTGAAG+AGG 0.594338 4_3:+15429860 Msa0631950:CDS
TCATATGTTAACATGTACGT+TGG 0.594529 4_3:-15429822 None:intergenic
TGCACGCATTATCTTGACTA+GGG 0.594838 4_3:-15431005 None:intergenic
CACAGGGAGGCTATGAGAAG+AGG 0.598459 4_3:+15428884 Msa0631950:intron
AAGCAAATTCAAGTAGTGAT+GGG 0.598610 4_3:-15424169 None:intergenic
AGGTCCAAATATCTACGGAT+GGG 0.599467 4_3:-15431100 None:intergenic
AAAATTTAAGGACTAAAGCA+CGG 0.603113 4_3:-15432218 None:intergenic
CTTGTATAAGTGATGAACAA+AGG 0.604324 4_3:+15426353 Msa0631950:CDS
AATGGGCAAACTATCGGCGG+TGG 0.604534 4_3:-15433804 None:intergenic
ACAGATAGGGGATGAAGTAG+TGG 0.607271 4_3:+15433386 Msa0631950:CDS
CTCAGTTGGATCACAGATAG+GGG 0.608551 4_3:+15433374 Msa0631950:CDS
GAAGAACCTTACTAACCTGA+AGG 0.608563 4_3:+15428546 Msa0631950:CDS
CAGACATAGCAGGAGGAGGG+AGG 0.609094 4_3:-15421330 None:intergenic
AAACATAGAATATGTAGCAG+TGG 0.610030 4_3:-15428924 None:intergenic
CTTCCATAACGGTTTCGAAG+AGG 0.611956 4_3:-15421380 None:intergenic
TCTACCTGCTCACTTGGTCG+AGG 0.611987 4_3:-15424434 None:intergenic
GGAAGGACGGAGGATCGAGT+AGG 0.614535 4_3:-15421232 None:intergenic
GCAGTAGCTCAGAGACCTGA+TGG 0.616317 4_3:+15423779 Msa0631950:CDS
TATTCGTAGAAAGGTTGCAA+AGG 0.616448 4_3:+15426180 Msa0631950:CDS
GGTGTGGGGAGAAGAAGCGG+GGG 0.616650 4_3:-15421275 None:intergenic
TCTCAAACTCATAGCTCCCA+TGG 0.618125 4_3:-15428960 None:intergenic
TTGTGCTGCATGATGATGGC+AGG 0.619380 4_3:+15429017 Msa0631950:CDS
CAACAAAGTTACAAGATGGT+CGG 0.620904 4_3:+15428721 Msa0631950:CDS
TATGAGTTTGAGACAAGGGG+AGG 0.621810 4_3:+15428970 Msa0631950:CDS
TGCTCTCAAATGAAAGAGTG+TGG 0.622325 4_3:-15433558 None:intergenic
GATCTCTTCCAAGTGATCAG+TGG 0.623686 4_3:-15426987 None:intergenic
AGCTATGAGTTTGAGACAAG+GGG 0.625008 4_3:+15428967 Msa0631950:CDS
ATGAACAAAGGAAAACAGCT+GGG 0.625112 4_3:+15426365 Msa0631950:CDS
TTCGATCATAGTGGATATGG+AGG 0.625596 4_3:+15434149 Msa0631950:three_prime_UTR
GACAGTTGAAGAGATGGCTG+AGG 0.626197 4_3:+15424223 Msa0631950:CDS
GAGGTAAATTGAACATAACC+AGG 0.626585 4_3:-15431076 None:intergenic
TTTACTATACTCGAATCGAA+AGG 0.628824 4_3:+15424392 Msa0631950:CDS
TTTACATCTGGTAATCTCGA+AGG 0.634450 4_3:+15432084 Msa0631950:CDS
CAGAGACTAATCGCATTGCA+GGG 0.637990 4_3:-15430841 None:intergenic
ATGAGAAAGTTAGAGCAGTG+AGG 0.639786 4_3:+15432124 Msa0631950:CDS
ATACCTGATAATGAGCAAGA+AGG 0.641739 4_3:-15431120 None:intergenic
TCAGAAAGCTCAGGACAACA+TGG 0.644937 4_3:+15424056 Msa0631950:CDS
AGTATTCTAGTATCCAGTAA+CGG 0.646549 4_3:-15432167 None:intergenic
AGTGCAACAAAGTTACAAGA+TGG 0.646571 4_3:+15428717 Msa0631950:CDS
AACCTGGAAGTATTGTGGAT+AGG 0.646902 4_3:+15428787 Msa0631950:CDS
GAGCTATGAGTTTGAGACAA+GGG 0.648036 4_3:+15428966 Msa0631950:CDS
TGATGTTGATGAAGCTGATG+AGG 0.650498 4_3:+15428579 Msa0631950:CDS
GCAACTAGATATGTTCAACC+TGG 0.651244 4_3:+15428771 Msa0631950:CDS
CAGGAAGCCAGCACGCCACG+GGG 0.652514 4_3:+15431042 Msa0631950:CDS
TGAGCAGAATAACTCTCGAG+AGG 0.659723 4_3:-15424341 None:intergenic
AACATTCCTTTACCCTACAG+GGG 0.659934 4_3:+15430914 Msa0631950:CDS
TTGGAGCTATGAGTGAGTGA+AGG 0.662282 4_3:-15421165 None:intergenic
CGATGATTCGATATCAACCA+AGG 0.665054 4_3:+15434197 Msa0631950:three_prime_UTR
CATCAAAGTGTCTAATCCAG+AGG 0.679471 4_3:+15430775 Msa0631950:CDS
TGATGGCAAGAAGAACTGGA+TGG 0.679573 4_3:+15423796 Msa0631950:CDS
AGATTACCAGATGTAAAGGG+TGG 0.689962 4_3:-15432078 None:intergenic
TAGCTATAGCTTCGCCACAG+AGG 0.696399 4_3:-15430874 None:intergenic
AGTATGGCAGACATAGCAGG+AGG 0.697147 4_3:-15421337 None:intergenic
AGAAGGAACCTACCTGCTGG+CGG 0.705987 4_3:-15429935 None:intergenic
AGATTCATCTGATCCAGACG+AGG 0.706348 4_3:+15427036 Msa0631950:CDS
GGAGCTATGAGTTTGAGACA+AGG 0.708450 4_3:+15428965 Msa0631950:CDS
AATAATGGGCAAACTATCGG+CGG 0.714415 4_3:-15433807 None:intergenic
GCACTTCCATGCAAAAGACG+AGG 0.722126 4_3:-15433623 None:intergenic
CAGGAATTCCCAAAACCCCG+TGG 0.722175 4_3:-15431057 None:intergenic
ACATAAATAATATCGTCACG+TGG 0.739907 4_3:-15433429 None:intergenic
TCTGAGATGATGATCCTCTG+TGG 0.740716 4_3:+15430860 Msa0631950:CDS

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! ATTTAAATAATATTATAAAA+AGG - chr4_3:15425160-15425179 None:intergenic 0.0%
!!! TTATTTTATTTTTAATATAT+TGG + chr4_3:15431909-15431928 Msa0631950:intron 0.0%
!! TTATTTATCATATAATAGTA+AGG + chr4_3:15422629-15422648 Msa0631950:intron 10.0%
!! TATTTATCATATAATAGTAA+GGG + chr4_3:15422630-15422649 Msa0631950:intron 10.0%
!! AAAAATATGTAACATAAATA+GGG + chr4_3:15423097-15423116 Msa0631950:intron 10.0%
!!! AAAAGAATACATTTTTTATA+TGG - chr4_3:15424593-15424612 None:intergenic 10.0%
!! AATAAAATAGTTCAAATAAA+GGG - chr4_3:15425126-15425145 None:intergenic 10.0%
!! AAATAAAATAGTTCAAATAA+AGG - chr4_3:15425127-15425146 None:intergenic 10.0%
!!! TTTTGAATTTTTTGTAAATT+GGG + chr4_3:15425615-15425634 Msa0631950:intron 10.0%
!!! ATTATGTAACTTATTTTAAT+TGG + chr4_3:15426529-15426548 Msa0631950:intron 10.0%
!!! TTTAAAACTATAAAAGTTAT+AGG + chr4_3:15427879-15427898 Msa0631950:intron 10.0%
!! TTAAAACTATAAAAGTTATA+GGG + chr4_3:15427880-15427899 Msa0631950:intron 10.0%
!!! TATTTGTTAATAAAATGTTA+GGG - chr4_3:15428674-15428693 None:intergenic 10.0%
!!! TTATTTGTTAATAAAATGTT+AGG - chr4_3:15428675-15428694 None:intergenic 10.0%
!!! TTAAATTTATTTTAACTTGA+AGG + chr4_3:15429136-15429155 Msa0631950:intron 10.0%
!!! ATCTATGATTATATTTTTAT+AGG + chr4_3:15429726-15429745 Msa0631950:intron 10.0%
!! ATTTGTGATTATAATAATTT+AGG + chr4_3:15429962-15429981 Msa0631950:intron 10.0%
!!! TCTTAAAATTTTATTATTCT+CGG + chr4_3:15430263-15430282 Msa0631950:intron 10.0%
!!! AGATGTATTATTTTATTTTT+TGG + chr4_3:15434086-15434105 Msa0631950:intron 10.0%
!! AATGTAAAGTGATTTATATT+TGG + chr4_3:15421980-15421999 Msa0631950:intron 15.0%
!! TGGATTTAACAATAAATTTA+AGG + chr4_3:15422020-15422039 Msa0631950:intron 15.0%
!! TGATAAATAAATATCAGATA+AGG - chr4_3:15422619-15422638 None:intergenic 15.0%
!!! CTACTTTTTTTTTTTTTCTT+CGG - chr4_3:15422780-15422799 None:intergenic 15.0%
!! GAAAAATATGTAACATAAAT+AGG + chr4_3:15423096-15423115 Msa0631950:intron 15.0%
!! AAAATATGTAACATAAATAG+GGG + chr4_3:15423098-15423117 Msa0631950:intron 15.0%
!! AAAATAACAAAAATAATGCA+AGG - chr4_3:15425589-15425608 None:intergenic 15.0%
!!! GTTTTGAATTTTTTGTAAAT+TGG + chr4_3:15425614-15425633 Msa0631950:intron 15.0%
!!! TATATAAAACATTGTTATTG+TGG + chr4_3:15425699-15425718 Msa0631950:intron 15.0%
!!! ATATAAAACATTGTTATTGT+GGG + chr4_3:15425700-15425719 Msa0631950:intron 15.0%
!! AAAGAATTGTAAATAAACTT+TGG - chr4_3:15425900-15425919 None:intergenic 15.0%
!!! TTTTGATTTTTTGTTCTATT+TGG + chr4_3:15426414-15426433 Msa0631950:intron 15.0%
!!! AAGTTACATAATTTAATTTG+TGG - chr4_3:15426521-15426540 None:intergenic 15.0%
!!! TTAAATCAACTTTTAACTAT+TGG - chr4_3:15427864-15427883 None:intergenic 15.0%
!! AAAGTAAATCCTATTATAAA+AGG + chr4_3:15429608-15429627 Msa0631950:intron 15.0%
!! AAGTAAATCCTATTATAAAA+GGG + chr4_3:15429609-15429628 Msa0631950:intron 15.0%
!!! TATGATTATATTTTTATAGG+TGG + chr4_3:15429729-15429748 Msa0631950:intron 15.0%
!! AAATTACATAATATTCTTGT+TGG - chr4_3:15430207-15430226 None:intergenic 15.0%
!! AGAATATTATGTAATTTATC+TGG + chr4_3:15430210-15430229 Msa0631950:intron 15.0%
!! GAATATTATGTAATTTATCT+GGG + chr4_3:15430211-15430230 Msa0631950:intron 15.0%
!!! AATAAAATTTTAAGATCCAT+GGG - chr4_3:15430258-15430277 None:intergenic 15.0%
!!! TAATAAAATTTTAAGATCCA+TGG - chr4_3:15430259-15430278 None:intergenic 15.0%
!!! ATTAATATTTAAGACTTTAC+TGG + chr4_3:15431524-15431543 Msa0631950:intron 15.0%
!!! TTAATATTTAAGACTTTACT+GGG + chr4_3:15431525-15431544 Msa0631950:intron 15.0%
!! AAATTAATCAAAATATAGCA+TGG - chr4_3:15431694-15431713 None:intergenic 15.0%
!! CTACATAATAACATAATATT+TGG + chr4_3:15432945-15432964 Msa0631950:intron 15.0%
!! AATAACATAATATTTGGTTA+TGG + chr4_3:15432951-15432970 Msa0631950:intron 15.0%
!!! AATTTTCATTTGTTATTACT+AGG + chr4_3:15433176-15433195 Msa0631950:intron 15.0%
!! CATCTTAAAAAGTTAATAAT+GGG - chr4_3:15433824-15433843 None:intergenic 15.0%
!! TAATGTACTTGAAATTTGAA+AGG + chr4_3:15423141-15423160 Msa0631950:intron 20.0%
!! AATGTACTTGAAATTTGAAA+GGG + chr4_3:15423142-15423161 Msa0631950:intron 20.0%
!! TTATTAGTTGTTCAAAACAA+CGG + chr4_3:15423236-15423255 Msa0631950:intron 20.0%
!!! TATTTTCTGCAATAATGTTT+TGG + chr4_3:15423538-15423557 Msa0631950:intron 20.0%
!!! ACTATCTAAATTTTATTTGC+TGG + chr4_3:15423642-15423661 Msa0631950:intron 20.0%
!!! TGAAAACATTGATTTTTTCA+AGG - chr4_3:15424484-15424503 None:intergenic 20.0%
!!! ATTTTGTATCTATTTGACAT+TGG - chr4_3:15424654-15424673 None:intergenic 20.0%
!!! ATCTAAGACTTATCTTAAAT+AGG - chr4_3:15424686-15424705 None:intergenic 20.0%
!! TATAAAACTTAAGACAAACA+TGG - chr4_3:15424890-15424909 None:intergenic 20.0%
!!! AACTTGTCTTAAAAACTTTT+GGG - chr4_3:15424975-15424994 None:intergenic 20.0%
!!! AAACTTGTCTTAAAAACTTT+TGG - chr4_3:15424976-15424995 None:intergenic 20.0%
!!! AAGTTTTTAAGACAAGTTTT+TGG + chr4_3:15424977-15424996 Msa0631950:intron 20.0%
!! AATCCATAACAATAGATAAA+AGG + chr4_3:15425051-15425070 Msa0631950:intron 20.0%
!! ATCCATAACAATAGATAAAA+GGG + chr4_3:15425052-15425071 Msa0631950:intron 20.0%
!! AATTTAGATCCTGTTAAAAT+AGG + chr4_3:15425193-15425212 Msa0631950:intron 20.0%
!!! GTTGTTGTTCATATTTTAAT+GGG - chr4_3:15425271-15425290 None:intergenic 20.0%
!!! TGTTGTTGTTCATATTTTAA+TGG - chr4_3:15425272-15425291 None:intergenic 20.0%
!! TTATGTAATTCAAAGATTCA+TGG - chr4_3:15426036-15426055 None:intergenic 20.0%
!!! GTAAATCTTTTGATAGATAT+TGG + chr4_3:15426917-15426936 Msa0631950:CDS 20.0%
!! CTAATATTCTAAGTGATATT+AGG - chr4_3:15427267-15427286 None:intergenic 20.0%
!! TCATATATTGCTAAGATAAA+GGG + chr4_3:15427336-15427355 Msa0631950:intron 20.0%
!! TTTAAACATTATAAGTTGCA+TGG + chr4_3:15427441-15427460 Msa0631950:intron 20.0%
!! TAACGAATAAACAACAAATA+TGG - chr4_3:15428000-15428019 None:intergenic 20.0%
!! TAAAGTTGAATGTTAATAAC+TGG + chr4_3:15428055-15428074 Msa0631950:intron 20.0%
!!! TATTTCAAAATTTTCATGCT+TGG - chr4_3:15428111-15428130 None:intergenic 20.0%
!!! TTAATTGTTGGAATTTTAGT+GGG - chr4_3:15428237-15428256 None:intergenic 20.0%
!!! ATTAATTGTTGGAATTTTAG+TGG - chr4_3:15428238-15428257 None:intergenic 20.0%
!!! TGTTTTTAAATGACAAATGT+CGG - chr4_3:15428263-15428282 None:intergenic 20.0%
!!! TTATATTTCTAATGTGCTAA+TGG - chr4_3:15429084-15429103 None:intergenic 20.0%
!!! TATTACGATTTGTTGAAATT+GGG - chr4_3:15429551-15429570 None:intergenic 20.0%
!!! TTATTACGATTTGTTGAAAT+TGG - chr4_3:15429552-15429571 None:intergenic 20.0%
!! ATTTCAACAAATCGTAATAA+TGG + chr4_3:15429552-15429571 Msa0631950:intron 20.0%
!! GAATACCTTTCATTATAAAA+GGG + chr4_3:15429631-15429650 Msa0631950:intron 20.0%
!! CAGAGAATATTATTAATAGA+AGG - chr4_3:15429755-15429774 None:intergenic 20.0%
!! TATAATCACAAATCAAAAGA+AGG - chr4_3:15429955-15429974 None:intergenic 20.0%
!!! TTAGGTTTTTAATGTTCTTA+TGG + chr4_3:15429980-15429999 Msa0631950:intron 20.0%
!! AAGCTATGAATTATAAATCA+GGG - chr4_3:15430127-15430146 None:intergenic 20.0%
!! AAAGCTATGAATTATAAATC+AGG - chr4_3:15430128-15430147 None:intergenic 20.0%
!!! TTTATAATTCATAGCTTTAC+AGG + chr4_3:15430130-15430149 Msa0631950:intron 20.0%
!! TCTAAATTCAAAAAAACTAC+CGG - chr4_3:15430478-15430497 None:intergenic 20.0%
!!! TTATTAGTCTCTGATATTTT+AGG + chr4_3:15430695-15430714 Msa0631950:intron 20.0%
!! ATATTATATACAACTACTTG+TGG + chr4_3:15431426-15431445 Msa0631950:intron 20.0%
!! AAAAGGATAGTAAATATTGT+TGG + chr4_3:15431454-15431473 Msa0631950:intron 20.0%
!! AATACATATGCATGTAAATA+GGG - chr4_3:15431501-15431520 None:intergenic 20.0%
!! AAATACATATGCATGTAAAT+AGG - chr4_3:15431502-15431521 None:intergenic 20.0%
!! ATAAAAAAAAAAACGAGAGT+AGG - chr4_3:15431660-15431679 None:intergenic 20.0%
!! ATATAACTCTATTAGTCAAA+TGG - chr4_3:15432651-15432670 None:intergenic 20.0%
!!! ACTATAACTTTTTTGTCAAT+TGG - chr4_3:15432788-15432807 None:intergenic 20.0%
!!! ATTGATTTTTGAATAAGACT+GGG + chr4_3:15432845-15432864 Msa0631950:intron 20.0%
!! CCATCTTAAAAAGTTAATAA+TGG - chr4_3:15433825-15433844 None:intergenic 20.0%
!!! CCATTATTAACTTTTTAAGA+TGG + chr4_3:15433822-15433841 Msa0631950:three_prime_UTR 20.0%
!!! CATATTTTACTGAAAATTCA+TGG + chr4_3:15433895-15433914 Msa0631950:three_prime_UTR 20.0%
!! ACATTACAATATACATTCTT+GGG - chr4_3:15434031-15434050 None:intergenic 20.0%
! TATTAGTCATGATCTTGTTA+AGG + chr4_3:15421734-15421753 Msa0631950:intron 25.0%
! AAAAATAAGCTCAATCCAAA+CGG + chr4_3:15421860-15421879 Msa0631950:intron 25.0%
!!! ATTCACAAGCTATTTTCAAA+AGG - chr4_3:15421900-15421919 None:intergenic 25.0%
! TGGATGTATTTATGTAAAAG+TGG + chr4_3:15422000-15422019 Msa0631950:intron 25.0%
! TTATCAATTGTAGAAATGTG+TGG + chr4_3:15422088-15422107 Msa0631950:intron 25.0%
! CATAATCATTATCCAATGTA+AGG - chr4_3:15422311-15422330 None:intergenic 25.0%
! CTTACATTGGATAATGATTA+TGG + chr4_3:15422309-15422328 Msa0631950:intron 25.0%
! GCTATATCTATAACAAGATA+AGG + chr4_3:15422404-15422423 Msa0631950:intron 25.0%
! AATAAGCTGAAAATAGTTTG+TGG + chr4_3:15422487-15422506 Msa0631950:intron 25.0%
!!! TTTCTTTTAAAGAGAGAATC+AGG + chr4_3:15422654-15422673 Msa0631950:intron 25.0%
!!! TTTTTTCTTCGGATTATCAA+TGG - chr4_3:15422769-15422788 None:intergenic 25.0%
!! TTCTTGTGATTTTCTCAAAA+GGG - chr4_3:15422961-15422980 None:intergenic 25.0%
!! ATTCTTGTGATTTTCTCAAA+AGG - chr4_3:15422962-15422981 None:intergenic 25.0%
! AACTTATTATGTCTCCTAAA+GGG - chr4_3:15423043-15423062 None:intergenic 25.0%
! TAACTTATTATGTCTCCTAA+AGG - chr4_3:15423044-15423063 None:intergenic 25.0%
!! TAACATAAATAGGGGTATAT+TGG + chr4_3:15423106-15423125 Msa0631950:intron 25.0%
! ATGTACTTGAAATTTGAAAG+GGG + chr4_3:15423143-15423162 Msa0631950:intron 25.0%
!!! AAGGGTATTATATTTAGAGA+CGG + chr4_3:15423196-15423215 Msa0631950:intron 25.0%
!!! TATATCATTACTTTTTCCTC+CGG - chr4_3:15423435-15423454 None:intergenic 25.0%
! ATTGCAGAAAATAGTTTCTA+TGG - chr4_3:15423531-15423550 None:intergenic 25.0%
! GCATTTAATAACAATGCAAT+AGG - chr4_3:15423889-15423908 None:intergenic 25.0%
! TTATTACTGTAACTAAGTAC+TGG + chr4_3:15424130-15424149 Msa0631950:intron 25.0%
!! TATCTATTTGACATTGGTTA+GGG - chr4_3:15424648-15424667 None:intergenic 25.0%
!! CTTTTTGAATTGTTAGAATG+GGG - chr4_3:15424763-15424782 None:intergenic 25.0%
!! GCTTTTTGAATTGTTAGAAT+GGG - chr4_3:15424764-15424783 None:intergenic 25.0%
!!! TGCTTTTTGAATTGTTAGAA+TGG - chr4_3:15424765-15424784 None:intergenic 25.0%
! GAAACAAAATATGTATGCTT+GGG - chr4_3:15425031-15425050 None:intergenic 25.0%
! TGAAACAAAATATGTATGCT+TGG - chr4_3:15425032-15425051 None:intergenic 25.0%
! TCCATAACAATAGATAAAAG+GGG + chr4_3:15425053-15425072 Msa0631950:intron 25.0%
! AAAAAAAACCAACCCAAAAA+GGG - chr4_3:15425090-15425109 None:intergenic 25.0%
! AAAAAAAAACCAACCCAAAA+AGG - chr4_3:15425091-15425110 None:intergenic 25.0%
! GTTCAAATAAAGGGTAAATT+TGG - chr4_3:15425117-15425136 None:intergenic 25.0%
! AAAAGTTTGAAGATATTGTG+TGG + chr4_3:15425464-15425483 Msa0631950:intron 25.0%
! ATATCATACACATATCAGTA+TGG + chr4_3:15425501-15425520 Msa0631950:intron 25.0%
!!! ATTTTTTAGTACAGAAAGAG+TGG - chr4_3:15425680-15425699 None:intergenic 25.0%
! TTCCTATAAATATGTTGAAG+TGG + chr4_3:15425828-15425847 Msa0631950:intron 25.0%
! TCCTATAAATATGTTGAAGT+GGG + chr4_3:15425829-15425848 Msa0631950:intron 25.0%
! AATTACATAAGTGATAAGTG+TGG + chr4_3:15426046-15426065 Msa0631950:intron 25.0%
!!! ATTTTTAAAAAGGAAGGTTG+AGG + chr4_3:15426153-15426172 Msa0631950:intron 25.0%
! TTGTAAGAACAGAACATTAT+CGG - chr4_3:15426583-15426602 None:intergenic 25.0%
! GAAGTTTAGTAGAAAAATCA+TGG + chr4_3:15426665-15426684 Msa0631950:intron 25.0%
! AAGAACAACAAAGTAATCTT+TGG - chr4_3:15426824-15426843 None:intergenic 25.0%
! AAATCAAGATTGACATGTAT+AGG - chr4_3:15426950-15426969 None:intergenic 25.0%
! TATTGCTCAAAATCTTCTAA+TGG + chr4_3:15427088-15427107 Msa0631950:intron 25.0%
! TTAGAATTATCTAATACGCT+TGG + chr4_3:15427136-15427155 Msa0631950:intron 25.0%
! TCAAAATATCATGCAAACAT+AGG - chr4_3:15427179-15427198 None:intergenic 25.0%
!! TAAGTGATATTAGGTTTTCA+AGG - chr4_3:15427258-15427277 None:intergenic 25.0%
!! TGAATATTTTATCCTTGACA+AGG + chr4_3:15427305-15427324 Msa0631950:intron 25.0%
! GTCATATATTGCTAAGATAA+AGG + chr4_3:15427335-15427354 Msa0631950:intron 25.0%
! TGTCATAAGTCATATTTAAC+AGG - chr4_3:15427481-15427500 None:intergenic 25.0%
! GTTAAATATGACTTATGACA+AGG + chr4_3:15427481-15427500 Msa0631950:intron 25.0%
!! ATGGAATAAATGAGTGTTTT+GGG + chr4_3:15427532-15427551 Msa0631950:intron 25.0%
! AAGACAAAATAGGAAAAAGT+TGG + chr4_3:15427725-15427744 Msa0631950:intron 25.0%
! ATAAACAACAAATATGGAGT+TGG - chr4_3:15427994-15428013 None:intergenic 25.0%
! AAATGTCGGAAATTAATTGT+TGG - chr4_3:15428249-15428268 None:intergenic 25.0%
! AGATTCTTTGACTAAATACA+TGG + chr4_3:15428347-15428366 Msa0631950:intron 25.0%
! CATAAATATAAGATGTTTCC+AGG - chr4_3:15428483-15428502 None:intergenic 25.0%
! TTTCACATGTTTAGATTAAC+AGG + chr4_3:15428524-15428543 Msa0631950:intron 25.0%
!! GCTTACATTAGTCTATAAAA+GGG - chr4_3:15429227-15429246 None:intergenic 25.0%
!! TGCTTACATTAGTCTATAAA+AGG - chr4_3:15429228-15429247 None:intergenic 25.0%
! ACTAATGTAAGCAAATCATT+GGG + chr4_3:15429235-15429254 Msa0631950:intron 25.0%
! CTTGATAAGAGTTTATAAAG+AGG + chr4_3:15429479-15429498 Msa0631950:intron 25.0%
!!! ATTACGATTTGTTGAAATTG+GGG - chr4_3:15429550-15429569 None:intergenic 25.0%
!!! TAATGGCTATTCTAGAATTA+AGG + chr4_3:15429569-15429588 Msa0631950:intron 25.0%
!!! AATGGCTATTCTAGAATTAA+GGG + chr4_3:15429570-15429589 Msa0631950:intron 25.0%
!!! AAGGTATTCCCTTTTATAAT+AGG - chr4_3:15429620-15429639 None:intergenic 25.0%
! GGAATACCTTTCATTATAAA+AGG + chr4_3:15429630-15429649 Msa0631950:intron 25.0%
!! GTATTCCCTTTTATAATGAA+AGG - chr4_3:15429639-15429658 None:intergenic 25.0%
!!! ATATTTCCTGTGGTTTTTTA+TGG - chr4_3:15429676-15429695 None:intergenic 25.0%
! CTTATGTCAGATCATATATA+TGG + chr4_3:15430037-15430056 Msa0631950:intron 25.0%
! TTGAAGGAATACAAACAAAT+AGG - chr4_3:15430397-15430416 None:intergenic 25.0%
! TCAAATATTGCACGAATTTA+TGG + chr4_3:15430520-15430539 Msa0631950:intron 25.0%
! TCTACATAAAGGTTTATTGA+TGG - chr4_3:15430809-15430828 None:intergenic 25.0%
! AAACCTTTATGTAGAAAATC+AGG + chr4_3:15430814-15430833 Msa0631950:CDS 25.0%
! GAAAGATTTATATCTGATTG+AGG - chr4_3:15430944-15430963 None:intergenic 25.0%
! CAAAAACATATAGATAGTTC+AGG - chr4_3:15431331-15431350 None:intergenic 25.0%
!! CTGAACTATCTATATGTTTT+TGG + chr4_3:15431329-15431348 Msa0631950:intron 25.0%
! TTATATACAAATTCCTCCTA+AGG + chr4_3:15431382-15431401 Msa0631950:intron 25.0%
! CATTATCTAATTAGATCCTT+AGG - chr4_3:15431401-15431420 None:intergenic 25.0%
! AACTACTTGTGGTTATTAAA+AGG + chr4_3:15431437-15431456 Msa0631950:intron 25.0%
!! TGGTGAAAAAGTATATTCAA+CGG + chr4_3:15431474-15431493 Msa0631950:intron 25.0%
! AATCAAATATGGACTTACAT+TGG - chr4_3:15431725-15431744 None:intergenic 25.0%
! AGAATGAAGGAAATCAAATA+TGG - chr4_3:15431736-15431755 None:intergenic 25.0%
! ATGATGAATATGTAGAATGA+AGG - chr4_3:15431749-15431768 None:intergenic 25.0%
! ATAACTGTCAATATGATATG+GGG - chr4_3:15431790-15431809 None:intergenic 25.0%
! CATAACTGTCAATATGATAT+GGG - chr4_3:15431791-15431810 None:intergenic 25.0%
! ACATAACTGTCAATATGATA+TGG - chr4_3:15431792-15431811 None:intergenic 25.0%
! ATAAAATCATGTCTTCTTCT+AGG - chr4_3:15431861-15431880 None:intergenic 25.0%
! TCACATAGCAAAATATGTAT+TGG - chr4_3:15431949-15431968 None:intergenic 25.0%
! AAAATTTAAGGACTAAAGCA+CGG - chr4_3:15432221-15432240 None:intergenic 25.0%
! TGCGATCTTTCAAAAATTTA+AGG - chr4_3:15432233-15432252 None:intergenic 25.0%
! AATCTTGAGTATTATTGGAA+AGG - chr4_3:15432551-15432570 None:intergenic 25.0%
! ATGGAGTAGTTAATTAGTTA+AGG - chr4_3:15432632-15432651 None:intergenic 25.0%
!!! GATTGATTTTTGAATAAGAC+TGG + chr4_3:15432844-15432863 Msa0631950:intron 25.0%
! ACATTTATATACATGATGTC+TGG - chr4_3:15432995-15433014 None:intergenic 25.0%
! AATAGAATAACACAATTGCA+TGG - chr4_3:15433296-15433315 None:intergenic 25.0%
! TGACGATATTATTTATGTGA+AGG + chr4_3:15433434-15433453 Msa0631950:CDS 25.0%
!!! ACAACTTGTTGAAATTGAAA+AGG - chr4_3:15433482-15433501 None:intergenic 25.0%
! ATTTCAACAAGTTGTTCAAA+AGG + chr4_3:15433487-15433506 Msa0631950:three_prime_UTR 25.0%
! TTAAATACAGAAGAACTTCT+AGG - chr4_3:15433520-15433539 None:intergenic 25.0%
!!! CAGCTTTAAATGATGAATTT+TGG - chr4_3:15433665-15433684 None:intergenic 25.0%
!! ATATGAGAAAAATCTCCTTT+TGG - chr4_3:15433880-15433899 None:intergenic 25.0%
! TAAAAATTGGGAATTATGAG+AGG - chr4_3:15434007-15434026 None:intergenic 25.0%
! ACATTCTTGGGATAAAAATT+GGG - chr4_3:15434019-15434038 None:intergenic 25.0%
! TACATTCTTGGGATAAAAAT+TGG - chr4_3:15434020-15434039 None:intergenic 25.0%
! CACATTACAATATACATTCT+TGG - chr4_3:15434032-15434051 None:intergenic 25.0%
!!! TCGTTCTTTTTTTTTATCCT+TGG - chr4_3:15434217-15434236 None:intergenic 25.0%
! TAACGGAAACAATTTTCTTG+CGG - chr4_3:15421428-15421447 None:intergenic 30.0%
! GTATCTTTTTGCAAAGGAAA+TGG - chr4_3:15421487-15421506 None:intergenic 30.0%
AAAATAAGCTCAATCCAAAC+GGG - chr4_3:15421861-15421880 None:intergenic 30.0%
CAAAATAAGCTCAATCCAAA+CGG - chr4_3:15421672-15421691 None:intergenic 30.0%
AAAATAAGCTCAATCCAAAC+GGG + chr4_3:15421861-15421880 Msa0631950:intron 30.0%
!!! TTTTCAAAAGGTATCACATG+CGG - chr4_3:15421888-15421907 None:intergenic 30.0%
ATTGTAGAAATGTGTGGTTT+AGG + chr4_3:15422094-15422113 Msa0631950:intron 30.0%
!!! TTTTTTGAGAGTCCTTACAT+TGG + chr4_3:15422296-15422315 Msa0631950:intron 30.0%
TTGGATAATGATTATGGACA+TGG + chr4_3:15422315-15422334 Msa0631950:intron 30.0%
TCAAAAGGGCCAAATATTTA+GGG - chr4_3:15422947-15422966 None:intergenic 30.0%
! GTTTTACAAGTTTACCCTTT+AGG + chr4_3:15423026-15423045 Msa0631950:intron 30.0%
! TTGAAAGGGGTCTTATAAAA+AGG + chr4_3:15423156-15423175 Msa0631950:intron 30.0%
! TGAAAGGGGTCTTATAAAAA+GGG + chr4_3:15423157-15423176 Msa0631950:intron 30.0%
GGATAGAGAAAAACTCAAAA+GGG + chr4_3:15423178-15423197 Msa0631950:intron 30.0%
CATAGATTTAATTGCAGCAA+AGG + chr4_3:15423266-15423285 Msa0631950:intron 30.0%
!! TTATTTTATCCTCCTCCTTT+TGG + chr4_3:15423488-15423507 Msa0631950:intron 30.0%
GTTAAAACAGCAAAACCAAA+AGG - chr4_3:15423506-15423525 None:intergenic 30.0%
! ACTTGTCTTCCTTTTCATAA+CGG - chr4_3:15423568-15423587 None:intergenic 30.0%
TAGATAGTAACCAAAGCAAT+GGG - chr4_3:15423630-15423649 None:intergenic 30.0%
TTAGATAGTAACCAAAGCAA+TGG - chr4_3:15423631-15423650 None:intergenic 30.0%
TTTGTTGAAACAGCATAATG+CGG + chr4_3:15423833-15423852 Msa0631950:intron 30.0%
TTCTTCAGCACAAAAAATCA+AGG - chr4_3:15423946-15423965 None:intergenic 30.0%
!!! TGATTTTTTGTGCTGAAGAA+TGG + chr4_3:15423946-15423965 Msa0631950:intron 30.0%
! ACAATATATGTCACTTGTTG+TGG - chr4_3:15423991-15424010 None:intergenic 30.0%
GTTACAGTAATAAGAGAGAA+AGG - chr4_3:15424123-15424142 None:intergenic 30.0%
AAGCAAATTCAAGTAGTGAT+GGG - chr4_3:15424172-15424191 None:intergenic 30.0%
TTTACTATACTCGAATCGAA+AGG + chr4_3:15424392-15424411 Msa0631950:CDS 30.0%
! GTATCTATTTGACATTGGTT+AGG - chr4_3:15424649-15424668 None:intergenic 30.0%
GCTATAGCAGTTAAAGAAAT+CGG + chr4_3:15424814-15424833 Msa0631950:intron 30.0%
ATAAAAGACCCATTTGATGA+CGG - chr4_3:15424846-15424865 None:intergenic 30.0%
AACATGGTTATGAGATAGTA+GGG - chr4_3:15424874-15424893 None:intergenic 30.0%
AAACATGGTTATGAGATAGT+AGG - chr4_3:15424875-15424894 None:intergenic 30.0%
! TCCCCTTTTATCTATTGTTA+TGG - chr4_3:15425057-15425076 None:intergenic 30.0%
AAAAAAACCAACCCAAAAAG+GGG - chr4_3:15425089-15425108 None:intergenic 30.0%
TCCTGTTAAAATAGGAACAA+TGG + chr4_3:15425201-15425220 Msa0631950:intron 30.0%
AATTAAGCACAGTAGAAAAG+CGG + chr4_3:15425399-15425418 Msa0631950:intron 30.0%
TATTGTGTGGATATGTATTG+AGG + chr4_3:15425477-15425496 Msa0631950:intron 30.0%
TACTCCAAAATTGCCAAAAA+AGG - chr4_3:15425548-15425567 None:intergenic 30.0%
TTGGCTTCAAATAACTGATT+TGG - chr4_3:15425644-15425663 None:intergenic 30.0%
! TCTATTTGTTGCAAAGTATG+TGG + chr4_3:15425790-15425809 Msa0631950:intron 30.0%
! GTGTGGTATTTTCATTAATG+AGG + chr4_3:15426063-15426082 Msa0631950:intron 30.0%
TATTATGCTCTGCAAAATCA+AGG + chr4_3:15426239-15426258 Msa0631950:CDS 30.0%
CTTGTATAAGTGATGAACAA+AGG + chr4_3:15426353-15426372 Msa0631950:CDS 30.0%
TGTAAGAACAGAACATTATC+GGG - chr4_3:15426582-15426601 None:intergenic 30.0%
TAGAAAAATCATGGAGTATG+AGG + chr4_3:15426674-15426693 Msa0631950:intron 30.0%
AGAAAAATCATGGAGTATGA+GGG + chr4_3:15426675-15426694 Msa0631950:intron 30.0%
GATCTCATCTAGTTAAAGTT+TGG + chr4_3:15426749-15426768 Msa0631950:intron 30.0%
ATTATCCATCTCAAGATAGT+AGG + chr4_3:15426783-15426802 Msa0631950:intron 30.0%
ATCTTTGGCGACATATATAA+CGG - chr4_3:15426809-15426828 None:intergenic 30.0%
TTGCAGATACTAAAGGAAAT+GGG + chr4_3:15426869-15426888 Msa0631950:intron 30.0%
AAACATAGGAATCCATACAT+AGG - chr4_3:15427165-15427184 None:intergenic 30.0%
!!! GCATGATATTTTGATACACT+TGG + chr4_3:15427185-15427204 Msa0631950:intron 30.0%
AATAAGAGATGTATTCAAGC+AGG + chr4_3:15427505-15427524 Msa0631950:intron 30.0%
ATAAGAGATGTATTCAAGCA+GGG + chr4_3:15427506-15427525 Msa0631950:intron 30.0%
! GATGGAATAAATGAGTGTTT+TGG + chr4_3:15427531-15427550 Msa0631950:intron 30.0%
ATTGTAAAACTATATCCCCT+AGG + chr4_3:15427601-15427620 Msa0631950:intron 30.0%
CAAAGAGTTAAAACCAAACT+AGG + chr4_3:15427657-15427676 Msa0631950:intron 30.0%
TAGGCTCAATGTTGTATATA+TGG + chr4_3:15427676-15427695 Msa0631950:intron 30.0%
AGGCTCAATGTTGTATATAT+GGG + chr4_3:15427677-15427696 Msa0631950:intron 30.0%
CTACCATCTTATCCATAATA+GGG - chr4_3:15427758-15427777 None:intergenic 30.0%
TCTACCATCTTATCCATAAT+AGG - chr4_3:15427759-15427778 None:intergenic 30.0%
TCTGATCTACTATCATTGAT+AGG - chr4_3:15427830-15427849 None:intergenic 30.0%
ATCAATGATAGTAGATCAGA+TGG + chr4_3:15427830-15427849 Msa0631950:intron 30.0%
TATTCGTTACTGTACAAAGT+TGG + chr4_3:15428011-15428030 Msa0631950:intron 30.0%
GTTGAATGTTAATAACTGGT+AGG + chr4_3:15428059-15428078 Msa0631950:intron 30.0%
AGGATGTAAGATAAGATATC+TGG - chr4_3:15428135-15428154 None:intergenic 30.0%
CATATACACTATAAAGTGGT+AGG - chr4_3:15428295-15428314 None:intergenic 30.0%
GGTACATATACACTATAAAG+TGG - chr4_3:15428299-15428318 None:intergenic 30.0%
TTCTTCCTTAACGTTCTTAA+TGG + chr4_3:15428859-15428878 Msa0631950:intron 30.0%
AACATAGAATATGTAGCAGT+GGG - chr4_3:15428926-15428945 None:intergenic 30.0%
AAACATAGAATATGTAGCAG+TGG - chr4_3:15428927-15428946 None:intergenic 30.0%
!!! AATTGAGGTCTGTACTTTTT+TGG - chr4_3:15429201-15429220 None:intergenic 30.0%
! TCTATAAAAGGGTGTAATTG+AGG - chr4_3:15429216-15429235 None:intergenic 30.0%
GACTAATGTAAGCAAATCAT+TGG + chr4_3:15429234-15429253 Msa0631950:intron 30.0%
CATAAGAGTTTATAAAGACG+AGG + chr4_3:15429295-15429314 Msa0631950:intron 30.0%
TCTGATACCTTGTTGAAATT+GGG - chr4_3:15429364-15429383 None:intergenic 30.0%
! TTTTATGGATGAAACAGGAA+AGG - chr4_3:15429661-15429680 None:intergenic 30.0%
!!! TGGTTTTTTATGGATGAAAC+AGG - chr4_3:15429666-15429685 None:intergenic 30.0%
TTTCATCCATAAAAAACCAC+AGG + chr4_3:15429667-15429686 Msa0631950:intron 30.0%
CAATGTTTCAATATTTCCTG+TGG - chr4_3:15429686-15429705 None:intergenic 30.0%
TCATATGTTAACATGTACGT+TGG - chr4_3:15429825-15429844 None:intergenic 30.0%
! TGAACTTAGAATTTTGTCTG+AGG + chr4_3:15429887-15429906 Msa0631950:CDS 30.0%
! AATCACCTCTTTTACCAAAA+GGG - chr4_3:15430017-15430036 None:intergenic 30.0%
TGTTGGATGATTTAAGTAAC+AGG - chr4_3:15430190-15430209 None:intergenic 30.0%
! AGCTATCTAAAGTGATTTGA+AGG - chr4_3:15430413-15430432 None:intergenic 30.0%
AATATTTGACTCCACGTATT+GGG - chr4_3:15430509-15430528 None:intergenic 30.0%
!!! AATAGTTTTAGCTGAATGCT+TGG + chr4_3:15430558-15430577 Msa0631950:intron 30.0%
!!! ATAGTTTTAGCTGAATGCTT+GGG + chr4_3:15430559-15430578 Msa0631950:intron 30.0%
CACAAGTCAGAATATCATTA+AGG - chr4_3:15430625-15430644 None:intergenic 30.0%
! CTTAATGATATTCTGACTTG+TGG + chr4_3:15430623-15430642 Msa0631950:intron 30.0%
TATCTAATTAGATCCTTAGG+AGG - chr4_3:15431398-15431417 None:intergenic 30.0%
! GATATGGGGTATATATTTTC+AGG - chr4_3:15431776-15431795 None:intergenic 30.0%
! AGATGTTTTTCTGTCTGTTT+TGG + chr4_3:15431996-15432015 Msa0631950:intron 30.0%
!! TTTGTTTTTCCTGCAGATAA+AGG + chr4_3:15432035-15432054 Msa0631950:intron 30.0%
AGTATTCTAGTATCCAGTAA+CGG - chr4_3:15432170-15432189 None:intergenic 30.0%
AGCATATAAAACATCTAGAC+AGG + chr4_3:15432356-15432375 Msa0631950:intron 30.0%
GATAGGTTACAAATAATGAG+TGG - chr4_3:15432589-15432608 None:intergenic 30.0%
AGTTAAGGAATTAGTCAAAG+TGG - chr4_3:15432617-15432636 None:intergenic 30.0%
CTAAATATTAGTTGTGTCGA+TGG + chr4_3:15432683-15432702 Msa0631950:intron 30.0%
! AGTTGAATACTGTTTTCACT+AGG + chr4_3:15432746-15432765 Msa0631950:intron 30.0%
ATCAATTAAGTGGAAATCAC+TGG - chr4_3:15433024-15433043 None:intergenic 30.0%
AGTGATTTCCACTTAATTGA+TGG + chr4_3:15433023-15433042 Msa0631950:intron 30.0%
!! ACTAAAGCATCGAGTTATTA+AGG - chr4_3:15433072-15433091 None:intergenic 30.0%
GGAAAGCTAAATTGAGATAT+AGG - chr4_3:15433095-15433114 None:intergenic 30.0%
ACATAAATAATATCGTCACG+TGG - chr4_3:15433432-15433451 None:intergenic 30.0%
CGATATTATTTATGTGAAGG+AGG + chr4_3:15433437-15433456 Msa0631950:CDS 30.0%
ACAGAAGTTCTTGAATGTTT+CGG + chr4_3:15433711-15433730 Msa0631950:intron 30.0%
!! GTTAATAATGGGCAAACTAT+CGG - chr4_3:15433813-15433832 None:intergenic 30.0%
! TTTAAGATGGTCTCTAATAG+AGG + chr4_3:15433835-15433854 Msa0631950:three_prime_UTR 30.0%
ATTCATTAGATGTTAGAGAG+TGG + chr4_3:15433967-15433986 Msa0631950:three_prime_UTR 30.0%
TTCATTAGATGTTAGAGAGT+GGG + chr4_3:15433968-15433987 Msa0631950:three_prime_UTR 30.0%
GTTATTTGTTTCGATCATAG+TGG + chr4_3:15434140-15434159 Msa0631950:three_prime_UTR 30.0%
! GAGGAGACATTTTCATTAAA+TGG + chr4_3:15434168-15434187 Msa0631950:three_prime_UTR 30.0%
!! GCATTGGTATCTTTTTGCAA+AGG - chr4_3:15421493-15421512 None:intergenic 35.0%
AAAGATACCAATGCACTGTT+TGG + chr4_3:15421499-15421518 Msa0631950:intron 35.0%
! CTTTTATCCAAACAGTGCAT+TGG - chr4_3:15421509-15421528 None:intergenic 35.0%
AAATAAGCTCAATCCAAACG+GGG + chr4_3:15421862-15421881 Msa0631950:intron 35.0%
!!! TAAGCTCTGTTTTTGTTCTC+CGG + chr4_3:15421927-15421946 Msa0631950:intron 35.0%
TCAAAATCAATTCAGCTCAC+CGG - chr4_3:15421949-15421968 None:intergenic 35.0%
! CACTAAGAATTTGCAGCTTT+TGG - chr4_3:15422065-15422084 None:intergenic 35.0%
CAAAAGCTGCAAATTCTTAG+TGG + chr4_3:15422063-15422082 Msa0631950:intron 35.0%
CTTGTGGATATGCTCAAATA+AGG + chr4_3:15422565-15422584 Msa0631950:intron 35.0%
TCAAATAAGGCAATCTGAAC+AGG + chr4_3:15422578-15422597 Msa0631950:intron 35.0%
CACTGCATGTATAAGCTATA+AGG + chr4_3:15422708-15422727 Msa0631950:intron 35.0%
GCACTTTAAATCTGTAGTGT+TGG + chr4_3:15422855-15422874 Msa0631950:intron 35.0%
! CTTTAAATCTGTAGTGTTGG+TGG + chr4_3:15422858-15422877 Msa0631950:intron 35.0%
!! TTGGTGGTGCATAATTTATG+AGG + chr4_3:15422874-15422893 Msa0631950:intron 35.0%
CAAAAGGGCCAAATATTTAG+GGG - chr4_3:15422946-15422965 None:intergenic 35.0%
CTCAAAAGGGCCAAATATTT+AGG - chr4_3:15422948-15422967 None:intergenic 35.0%
GGGATAGAGAAAAACTCAAA+AGG + chr4_3:15423177-15423196 Msa0631950:intron 35.0%
GGTATTATATTTAGAGACGG+AGG + chr4_3:15423199-15423218 Msa0631950:intron 35.0%
!! AATTGCAGCAAAGGTTTTGA+AGG + chr4_3:15423275-15423294 Msa0631950:intron 35.0%
TACAGCATTGTGACTGTAAT+TGG + chr4_3:15423305-15423324 Msa0631950:intron 35.0%
ACAGCATTGTGACTGTAATT+GGG + chr4_3:15423306-15423325 Msa0631950:intron 35.0%
ACAGAAACACTGTCAAAATC+CGG + chr4_3:15423413-15423432 Msa0631950:intron 35.0%
AAAACAGCAAAACCAAAAGG+AGG - chr4_3:15423503-15423522 None:intergenic 35.0%
TTTGGATACCCGTTATGAAA+AGG + chr4_3:15423556-15423575 Msa0631950:intron 35.0%
! CTTGTCTTCCTTTTCATAAC+GGG - chr4_3:15423567-15423586 None:intergenic 35.0%
AAAGCGGTAACATCAAATCT+AGG - chr4_3:15423607-15423626 None:intergenic 35.0%
! CAAAAGCAAACCTTTTTGCA+AGG - chr4_3:15423726-15423745 None:intergenic 35.0%
!! CTTGCAAAAAGGTTTGCTTT+TGG + chr4_3:15423724-15423743 Msa0631950:CDS 35.0%
CATAATGCGGCATGTTTAAT+AGG + chr4_3:15423846-15423865 Msa0631950:intron 35.0%
TTAATAGGTTGCTAGGTGTT+TGG + chr4_3:15423861-15423880 Msa0631950:intron 35.0%
TAATAGGTTGCTAGGTGTTT+GGG + chr4_3:15423862-15423881 Msa0631950:intron 35.0%
CAAGTGACATATATTGTTCC+CGG + chr4_3:15423994-15424013 Msa0631950:CDS 35.0%
TTGGTCAAAATTGGATATGC+CGG - chr4_3:15424016-15424035 None:intergenic 35.0%
GATATCTGCTTGGTCAAAAT+TGG - chr4_3:15424025-15424044 None:intergenic 35.0%
! ACATTTTGTTCAGAAAGCTC+AGG + chr4_3:15424047-15424066 Msa0631950:CDS 35.0%
CAAGCAAATTCAAGTAGTGA+TGG - chr4_3:15424173-15424192 None:intergenic 35.0%
! CATCACTACTTGAATTTGCT+TGG + chr4_3:15424171-15424190 Msa0631950:CDS 35.0%
ATTCAGTCCAGAGATCATAT+TGG - chr4_3:15424254-15424273 None:intergenic 35.0%
CCAAAAATTATCTGCAGAAC+AGG - chr4_3:15424311-15424330 None:intergenic 35.0%
! CCTGTTCTGCAGATAATTTT+TGG + chr4_3:15424308-15424327 Msa0631950:intron 35.0%
! TAACTTGTATATGCTCTCTG+AGG + chr4_3:15424519-15424538 Msa0631950:intron 35.0%
ACATGGTTATGAGATAGTAG+GGG - chr4_3:15424873-15424892 None:intergenic 35.0%
! TTTGGGCAAATTTGTTCTTC+AGG - chr4_3:15424958-15424977 None:intergenic 35.0%
CAATAGATAAAAGGGGATTG+TGG + chr4_3:15425060-15425079 Msa0631950:intron 35.0%
!!! GCCATTGTTCCTATTTTAAC+AGG - chr4_3:15425205-15425224 None:intergenic 35.0%
AGGAACAATGGCACTAAAAT+AGG + chr4_3:15425213-15425232 Msa0631950:intron 35.0%
!!! GACACCTTTTTTGGCAATTT+TGG + chr4_3:15425541-15425560 Msa0631950:intron 35.0%
!!! TTTGGCAATTTTGGAGTATC+TGG + chr4_3:15425550-15425569 Msa0631950:intron 35.0%
GATCTTGTCATATGAGTCAT+AGG + chr4_3:15425722-15425741 Msa0631950:intron 35.0%
TCTTTCGTAAGCAGCTAATT+TGG + chr4_3:15425747-15425766 Msa0631950:intron 35.0%
CTTTCGTAAGCAGCTAATTT+GGG + chr4_3:15425748-15425767 Msa0631950:intron 35.0%
! GCAAAGTATGTGGTCTTTTA+AGG + chr4_3:15425800-15425819 Msa0631950:intron 35.0%
!! AAGTATGTGGTCTTTTAAGG+TGG + chr4_3:15425803-15425822 Msa0631950:intron 35.0%
GCCCACTTCAACATATTTAT+AGG - chr4_3:15425833-15425852 None:intergenic 35.0%
AACAAAACACCAATGTAGCT+AGG - chr4_3:15425858-15425877 None:intergenic 35.0%
!! GCTACATTGGTGTTTTGTTA+AGG + chr4_3:15425859-15425878 Msa0631950:intron 35.0%
!! ACATTGGTGTTTTGTTAAGG+AGG + chr4_3:15425862-15425881 Msa0631950:intron 35.0%
AGTTAATGAGACGCATTGAA+AGG + chr4_3:15425967-15425986 Msa0631950:intron 35.0%
TATTCGTAGAAAGGTTGCAA+AGG + chr4_3:15426180-15426199 Msa0631950:CDS 35.0%
TTGGAAGGTTTATCATGTGA+AGG - chr4_3:15426265-15426284 None:intergenic 35.0%
ATAAACCTTCCAAATCTTCG+TGG + chr4_3:15426272-15426291 Msa0631950:CDS 35.0%
ATGAACAAAGGAAAACAGCT+GGG + chr4_3:15426365-15426384 Msa0631950:CDS 35.0%
GTAAGAACAGAACATTATCG+GGG - chr4_3:15426581-15426600 None:intergenic 35.0%
! GATTCAGTTGTCTTTTTGCT+CGG + chr4_3:15426643-15426662 Msa0631950:intron 35.0%
ACTAGATGAGATCAACTACA+GGG - chr4_3:15426742-15426761 None:intergenic 35.0%
AACTAGATGAGATCAACTAC+AGG - chr4_3:15426743-15426762 None:intergenic 35.0%
TTTAGTATCTGCAAGAAGCA+TGG - chr4_3:15426863-15426882 None:intergenic 35.0%
ATGCTTCTTGCAGATACTAA+AGG + chr4_3:15426862-15426881 Msa0631950:intron 35.0%
CTTGCAGATACTAAAGGAAA+TGG + chr4_3:15426868-15426887 Msa0631950:intron 35.0%
CAAATAAAAATCACCTCGTC+TGG - chr4_3:15427052-15427071 None:intergenic 35.0%
GTGATAAAGAATCCAGACAT+AGG - chr4_3:15427116-15427135 None:intergenic 35.0%
!! TAGGTTTTCAAGGATGAAAC+AGG - chr4_3:15427248-15427267 None:intergenic 35.0%
ATGACATCATAACCTTGTCA+AGG - chr4_3:15427320-15427339 None:intergenic 35.0%
TGATTAACATCACATCCTAG+GGG - chr4_3:15427619-15427638 None:intergenic 35.0%
GTGATTAACATCACATCCTA+GGG - chr4_3:15427620-15427639 None:intergenic 35.0%
CTAGGATGTGATGTTAATCA+CGG + chr4_3:15427619-15427638 Msa0631950:intron 35.0%
ATACAACATTGAGCCTAGTT+TGG - chr4_3:15427673-15427692 None:intergenic 35.0%
TGGGAATGTTACAATGTATG+AGG + chr4_3:15427696-15427715 Msa0631950:intron 35.0%
GGGAATGTTACAATGTATGA+GGG + chr4_3:15427697-15427716 Msa0631950:intron 35.0%
GGAATGTTACAATGTATGAG+GGG + chr4_3:15427698-15427717 Msa0631950:intron 35.0%
GAATGTTACAATGTATGAGG+GGG + chr4_3:15427699-15427718 Msa0631950:intron 35.0%
GTACCCTATTATGGATAAGA+TGG + chr4_3:15427752-15427771 Msa0631950:intron 35.0%
AACACGATCAAACTTCCTAA+GGG - chr4_3:15427787-15427806 None:intergenic 35.0%
AAACACGATCAAACTTCCTA+AGG - chr4_3:15427788-15427807 None:intergenic 35.0%
ATCATTGATAGGCCATCAAT+AGG - chr4_3:15427819-15427838 None:intergenic 35.0%
CACTAGACGTTGTTTGTAAT+TGG + chr4_3:15427940-15427959 Msa0631950:intron 35.0%
CAAATATGGAGTTGGAGATA+TGG - chr4_3:15427986-15428005 None:intergenic 35.0%
TTACTGTACAAAGTTGGAAG+AGG + chr4_3:15428017-15428036 Msa0631950:intron 35.0%
ATGTTAATAACTGGTAGGTG+TGG + chr4_3:15428064-15428083 Msa0631950:intron 35.0%
TTATCGCTCAGTAGGATATT+AGG - chr4_3:15428155-15428174 None:intergenic 35.0%
TAATATCCTACTGAGCGATA+AGG + chr4_3:15428154-15428173 Msa0631950:intron 35.0%
AGATGTTTCCAGGTAACAAT+AGG - chr4_3:15428473-15428492 None:intergenic 35.0%
ATCAGCTTCATCAACATCAA+TGG - chr4_3:15428578-15428597 None:intergenic 35.0%
!!! GTGTTGCTCCATTGATTTTA+AGG + chr4_3:15428647-15428666 Msa0631950:intron 35.0%
GTTAGGGTCCTTAAAATCAA+TGG - chr4_3:15428658-15428677 None:intergenic 35.0%
AGTGCAACAAAGTTACAAGA+TGG + chr4_3:15428717-15428736 Msa0631950:CDS 35.0%
CAACAAAGTTACAAGATGGT+CGG + chr4_3:15428721-15428740 Msa0631950:CDS 35.0%
AAGATGGTCGGATTAACATT+TGG + chr4_3:15428733-15428752 Msa0631950:CDS 35.0%
! AAGTATTGTGGATAGGTATG+TGG + chr4_3:15428794-15428813 Msa0631950:intron 35.0%
TTTCCAGAAAATCTTGCCAT+GGG + chr4_3:15428944-15428963 Msa0631950:CDS 35.0%
AACTTGAAGGAGAGAAAAGA+TGG + chr4_3:15429149-15429168 Msa0631950:intron 35.0%
GAATCCTATCTATCCAATGT+GGG - chr4_3:15429273-15429292 None:intergenic 35.0%
AGAATCCTATCTATCCAATG+TGG - chr4_3:15429274-15429293 None:intergenic 35.0%
!!! TTTTATGAGCTGGTTCTGTA+AGG + chr4_3:15429327-15429346 Msa0631950:intron 35.0%
CTGATACCTTGTTGAAATTG+GGG - chr4_3:15429363-15429382 None:intergenic 35.0%
CTCTGATACCTTGTTGAAAT+TGG - chr4_3:15429365-15429384 None:intergenic 35.0%
CTAACTCATCCTTACAAAAC+CGG - chr4_3:15429526-15429545 None:intergenic 35.0%
ACTCAATTTGAACCTTGAAG+AGG + chr4_3:15429860-15429879 Msa0631950:CDS 35.0%
CTGCAAATCTTCGGTTAAAT+TGG + chr4_3:15429910-15429929 Msa0631950:CDS 35.0%
! TGGTTTTTCTGTATCCCTTT+TGG + chr4_3:15430000-15430019 Msa0631950:intron 35.0%
! TGTATCCCTTTTGGTAAAAG+AGG + chr4_3:15430009-15430028 Msa0631950:intron 35.0%
! GAATCACCTCTTTTACCAAA+AGG - chr4_3:15430018-15430037 None:intergenic 35.0%
! TGTAATTTATCTGGGATTCG+AGG + chr4_3:15430219-15430238 Msa0631950:intron 35.0%
GCAATCACACTATTGTAAAC+TGG + chr4_3:15430343-15430362 Msa0631950:intron 35.0%
! TCGAAAGTATATTGTCTGAG+AGG + chr4_3:15430452-15430471 Msa0631950:intron 35.0%
AGAAACTTATACCCAATACG+TGG + chr4_3:15430495-15430514 Msa0631950:intron 35.0%
CAATATTTGACTCCACGTAT+TGG - chr4_3:15430510-15430529 None:intergenic 35.0%
TCATTAAGGATCAACAAGCA+TGG - chr4_3:15430611-15430630 None:intergenic 35.0%
! GATATTCTGACTTGTGGAAT+TGG + chr4_3:15430629-15430648 Msa0631950:intron 35.0%
! TAAAGGTTTATTGATGGCTC+TGG - chr4_3:15430803-15430822 None:intergenic 35.0%
! CTGCCTGATTTTCTACATAA+AGG - chr4_3:15430820-15430839 None:intergenic 35.0%
CTATAGCTACATTTGGATCT+CGG + chr4_3:15430888-15430907 Msa0631950:CDS 35.0%
ATAACATTCCTTTACCCTAC+AGG + chr4_3:15430912-15430931 Msa0631950:CDS 35.0%
TAACATTCCTTTACCCTACA+GGG + chr4_3:15430913-15430932 Msa0631950:CDS 35.0%
! AATTTTCCCATCTTCCAGAA+GGG + chr4_3:15430966-15430985 Msa0631950:CDS 35.0%
GAGGTAAATTGAACATAACC+AGG - chr4_3:15431079-15431098 None:intergenic 35.0%
CAAGAAGGTCCAAATATCTA+CGG - chr4_3:15431108-15431127 None:intergenic 35.0%
! ATACCTGATAATGAGCAAGA+AGG - chr4_3:15431123-15431142 None:intergenic 35.0%
!!! AACTTTTAGTTCCCTTCACA+AGG + chr4_3:15431274-15431293 Msa0631950:intron 35.0%
!!! ACTTTTAGTTCCCTTCACAA+GGG + chr4_3:15431275-15431294 Msa0631950:intron 35.0%
CAAATATGGACTTACATTGG+TGG - chr4_3:15431722-15431741 None:intergenic 35.0%
! TATGTATTGGTGTGAGTATG+AGG - chr4_3:15431936-15431955 None:intergenic 35.0%
TAAGAAATGCCTTTATCTGC+AGG - chr4_3:15432047-15432066 None:intergenic 35.0%
!! CAGATAAAGGCATTTCTTAG+AGG + chr4_3:15432048-15432067 Msa0631950:intron 35.0%
TCGAGATTACCAGATGTAAA+GGG - chr4_3:15432084-15432103 None:intergenic 35.0%
TTCGAGATTACCAGATGTAA+AGG - chr4_3:15432085-15432104 None:intergenic 35.0%
TTTACATCTGGTAATCTCGA+AGG + chr4_3:15432084-15432103 Msa0631950:CDS 35.0%
TCAGTAGGACAATTATCGAA+TGG - chr4_3:15432327-15432346 None:intergenic 35.0%
AATAGTTGTACTTGTACCAG+TGG + chr4_3:15432445-15432464 Msa0631950:intron 35.0%
ATAGTTGTACTTGTACCAGT+GGG + chr4_3:15432446-15432465 Msa0631950:intron 35.0%
!! ATTCTGTTTTTCTTACCCAC+TGG - chr4_3:15432464-15432483 None:intergenic 35.0%
TATTATTGGAAAGGAGGCTA+AGG - chr4_3:15432542-15432561 None:intergenic 35.0%
CTTGAGTATTATTGGAAAGG+AGG - chr4_3:15432548-15432567 None:intergenic 35.0%
AGGGCAATCTTGAGTATTAT+TGG - chr4_3:15432556-15432575 None:intergenic 35.0%
AATGAGTGGAAGATTAGAGA+GGG - chr4_3:15432575-15432594 None:intergenic 35.0%
TAATGAGTGGAAGATTAGAG+AGG - chr4_3:15432576-15432595 None:intergenic 35.0%
TAGTCAAAGTGGAAGATGAT+AGG - chr4_3:15432606-15432625 None:intergenic 35.0%
AATACAGCTACTTGTATGAC+TGG - chr4_3:15432725-15432744 None:intergenic 35.0%
! ATGATGTCTGGAATAAGAGA+AGG - chr4_3:15432983-15433002 None:intergenic 35.0%
GAATCTGACCATCAATTAAG+TGG - chr4_3:15433034-15433053 None:intergenic 35.0%
! AGCATCGAGTTATTAAGGTT+TGG - chr4_3:15433067-15433086 None:intergenic 35.0%
! TTAGCTTTCCCTAATTCCTT+AGG + chr4_3:15433105-15433124 Msa0631950:intron 35.0%
TGAGTATGTTCAGATAACCT+CGG + chr4_3:15433246-15433265 Msa0631950:intron 35.0%
TACAATTGCAGCACAATTGA+AGG - chr4_3:15433737-15433756 None:intergenic 35.0%
TGTAGTAATGCATTGCCAAA+AGG + chr4_3:15433862-15433881 Msa0631950:three_prime_UTR 35.0%
TTACTGAAAATTCATGGCTG+AGG + chr4_3:15433901-15433920 Msa0631950:three_prime_UTR 35.0%
TACTGAAAATTCATGGCTGA+GGG + chr4_3:15433902-15433921 Msa0631950:three_prime_UTR 35.0%
!!! AGGGCATTTTGTTTTTGGAA+CGG + chr4_3:15433921-15433940 Msa0631950:three_prime_UTR 35.0%
!! TGTTTCGATCATAGTGGATA+TGG + chr4_3:15434146-15434165 Msa0631950:three_prime_UTR 35.0%
AGAAGGTTTCAGAGGTTCAT+TGG - chr4_3:15421187-15421206 None:intergenic 40.0%
!! ACCTCTGAAACCTTCTTCAA+TGG + chr4_3:15421191-15421210 Msa0631950:exon 40.0%
GGCTTGAAGTTCTTCCATAA+CGG - chr4_3:15421394-15421413 None:intergenic 40.0%
TTTCTTGCGGAGTTTACGTT+TGG - chr4_3:15421415-15421434 None:intergenic 40.0%
!! CGAAGAAGAAGAAGCGTTAA+CGG - chr4_3:15421445-15421464 None:intergenic 40.0%
CAGTCTCACAAAACTTATGC+TGG - chr4_3:15421644-15421663 None:intergenic 40.0%
!! GCATAAGTTTTGTGAGACTG+TGG + chr4_3:15421644-15421663 Msa0631950:intron 40.0%
!! AATTTCTAGCACGTGCTTTG+TGG + chr4_3:15422183-15422202 Msa0631950:intron 40.0%
GCAAGTCTTAAGAACTTGAC+CGG + chr4_3:15422228-15422247 Msa0631950:intron 40.0%
CAAGTCTTAAGAACTTGACC+GGG + chr4_3:15422229-15422248 Msa0631950:intron 40.0%
CTCACAAATGTTTACGCTTG+TGG + chr4_3:15422549-15422568 Msa0631950:intron 40.0%
ATCTGAACAGGCTCTTTAAG+TGG + chr4_3:15422590-15422609 Msa0631950:intron 40.0%
! TAAGGCACTCACTATCACAA+AGG + chr4_3:15422726-15422745 Msa0631950:intron 40.0%
! TACATGTGTCAGTGTGGTTT+TGG + chr4_3:15422817-15422836 Msa0631950:intron 40.0%
AATCCCTGCCCCTAAATATT+TGG + chr4_3:15422935-15422954 Msa0631950:intron 40.0%
CAGCATTGTGACTGTAATTG+GGG + chr4_3:15423307-15423326 Msa0631950:intron 40.0%
TAACCAAAGCAATGGGAAAG+CGG - chr4_3:15423623-15423642 None:intergenic 40.0%
!! TATTTGCTGGTTTGACAGCA+CGG + chr4_3:15423655-15423674 Msa0631950:intron 40.0%
GGCATGTTTAATAGGTTGCT+AGG + chr4_3:15423854-15423873 Msa0631950:intron 40.0%
TGGTCAAAATTGGATATGCC+GGG - chr4_3:15424015-15424034 None:intergenic 40.0%
CAAAATGTGCGATATCTGCT+TGG - chr4_3:15424035-15424054 None:intergenic 40.0%
! AGTACTGGATGATATGATGC+AGG + chr4_3:15424145-15424164 Msa0631950:intron 40.0%
GGTAGTACCAATATGATCTC+TGG + chr4_3:15424244-15424263 Msa0631950:intron 40.0%
CAGAACAGGCATTTCATGTA+AGG - chr4_3:15424297-15424316 None:intergenic 40.0%
AAAGGATTGCGTTGCGTTTA+TGG + chr4_3:15424410-15424429 Msa0631950:CDS 40.0%
AATACATCTACCTGCTCACT+TGG - chr4_3:15424443-15424462 None:intergenic 40.0%
! GATTGTGGATACCCCTTTTT+GGG + chr4_3:15425075-15425094 Msa0631950:intron 40.0%
!! AAAAAGGTGTCATACCGGTA+GGG - chr4_3:15425532-15425551 None:intergenic 40.0%
!! AAAAAAGGTGTCATACCGGT+AGG - chr4_3:15425533-15425552 None:intergenic 40.0%
!!! TACCGGTATGACACCTTTTT+TGG + chr4_3:15425532-15425551 Msa0631950:intron 40.0%
!! TGCCAAAAAAGGTGTCATAC+CGG - chr4_3:15425537-15425556 None:intergenic 40.0%
TAATGCAAGGCTATCTACGA+AGG - chr4_3:15425576-15425595 None:intergenic 40.0%
! ATTTGAAGCCAATGCTTGTG+AGG + chr4_3:15425652-15425671 Msa0631950:intron 40.0%
TGAGGAGCTTATTCGTAGAA+AGG + chr4_3:15426171-15426190 Msa0631950:CDS 40.0%
GGAAGGATGAGGAGAAAATT+TGG + chr4_3:15426293-15426312 Msa0631950:CDS 40.0%
GATGAACAAAGGAAAACAGC+TGG + chr4_3:15426364-15426383 Msa0631950:CDS 40.0%
TCACTGAGTCTTACTCCATT+AGG + chr4_3:15426488-15426507 Msa0631950:intron 40.0%
CACTGAGTCTTACTCCATTA+GGG + chr4_3:15426489-15426508 Msa0631950:intron 40.0%
ACTGAGTCTTACTCCATTAG+GGG + chr4_3:15426490-15426509 Msa0631950:intron 40.0%
ATTTGTGGATTCTCCCCTAA+TGG - chr4_3:15426506-15426525 None:intergenic 40.0%
!! ACTGCTTTCTAAAACGAGAG+AGG + chr4_3:15426608-15426627 Msa0631950:intron 40.0%
GTTGAATGCCTAGAGTATGA+GGG + chr4_3:15426697-15426716 Msa0631950:intron 40.0%
CTAGATGAGATCAACTACAG+GGG - chr4_3:15426741-15426760 None:intergenic 40.0%
GATACTAAAGGAAATGGGTC+TGG + chr4_3:15426874-15426893 Msa0631950:intron 40.0%
ATCTCTTCCAAGTGATCAGT+GGG - chr4_3:15426989-15427008 None:intergenic 40.0%
CTTCTAATGGTTCCTATGTC+TGG + chr4_3:15427101-15427120 Msa0631950:intron 40.0%
TACGCTTGGATTCCTATGTA+TGG + chr4_3:15427150-15427169 Msa0631950:intron 40.0%
CGTGATTAACATCACATCCT+AGG - chr4_3:15427621-15427640 None:intergenic 40.0%
GTTTCGAGAAGACCTATTGA+TGG + chr4_3:15427804-15427823 Msa0631950:intron 40.0%
AAGTTGGAAGAGGATATTGC+AGG + chr4_3:15428027-15428046 Msa0631950:intron 40.0%
!! GTTGGAATTTTAGTGGGAGA+GGG - chr4_3:15428231-15428250 None:intergenic 40.0%
!! TGTTGGAATTTTAGTGGGAG+AGG - chr4_3:15428232-15428251 None:intergenic 40.0%
TGAATCCTCCTATTGTTACC+TGG + chr4_3:15428462-15428481 Msa0631950:intron 40.0%
TGTTTCCAGGTAACAATAGG+AGG - chr4_3:15428470-15428489 None:intergenic 40.0%
GAAGAACCTTACTAACCTGA+AGG + chr4_3:15428546-15428565 Msa0631950:CDS 40.0%
! CATAGACCTTCAGGTTAGTA+AGG - chr4_3:15428555-15428574 None:intergenic 40.0%
! TGATGTTGATGAAGCTGATG+AGG + chr4_3:15428579-15428598 Msa0631950:CDS 40.0%
GCAACTAGATATGTTCAACC+TGG + chr4_3:15428771-15428790 Msa0631950:CDS 40.0%
!! TGTTCAACCTGGAAGTATTG+TGG + chr4_3:15428782-15428801 Msa0631950:CDS 40.0%
!! AACCTGGAAGTATTGTGGAT+AGG + chr4_3:15428787-15428806 Msa0631950:CDS 40.0%
TACCTATCCACAATACTTCC+AGG - chr4_3:15428792-15428811 None:intergenic 40.0%
! GTGTGCCATTAAGAACGTTA+AGG - chr4_3:15428867-15428886 None:intergenic 40.0%
TAACGTTCTTAATGGCACAC+AGG + chr4_3:15428867-15428886 Msa0631950:intron 40.0%
AACGTTCTTAATGGCACACA+GGG + chr4_3:15428868-15428887 Msa0631950:intron 40.0%
GTTTCCAGAAAATCTTGCCA+TGG + chr4_3:15428943-15428962 Msa0631950:CDS 40.0%
! GAGCTATGAGTTTGAGACAA+GGG + chr4_3:15428966-15428985 Msa0631950:CDS 40.0%
! AGCTATGAGTTTGAGACAAG+GGG + chr4_3:15428967-15428986 Msa0631950:CDS 40.0%
GAAAAACTCAAGTCCCACAT+TGG + chr4_3:15429257-15429276 Msa0631950:intron 40.0%
AAGTCCCACATTGGATAGAT+AGG + chr4_3:15429266-15429285 Msa0631950:intron 40.0%
! GCACTCTTCATTTTATGAGC+TGG + chr4_3:15429317-15429336 Msa0631950:intron 40.0%
GTTACTCCCCAATTTCAACA+AGG + chr4_3:15429354-15429373 Msa0631950:intron 40.0%
GAAAAACCCAAGTCTCACAT+TGG + chr4_3:15429444-15429463 Msa0631950:intron 40.0%
ATCTGTCCAATGTGAGACTT+GGG - chr4_3:15429453-15429472 None:intergenic 40.0%
TATCTGTCCAATGTGAGACT+TGG - chr4_3:15429454-15429473 None:intergenic 40.0%
CCTTACAAAACCGGATCATA+AGG - chr4_3:15429517-15429536 None:intergenic 40.0%
!! CCTTATGATCCGGTTTTGTA+AGG + chr4_3:15429514-15429533 Msa0631950:intron 40.0%
CAATTTGAACCTTGAAGAGG+AGG + chr4_3:15429863-15429882 Msa0631950:CDS 40.0%
TAAGTTCAACCTCCTCTTCA+AGG - chr4_3:15429875-15429894 None:intergenic 40.0%
AAACTGGCAGCATGCTTTAA+TGG + chr4_3:15430359-15430378 Msa0631950:intron 40.0%
AAGTATATTGTCTGAGAGGC+CGG + chr4_3:15430456-15430475 Msa0631950:intron 40.0%
TGCATTCCCTTCCTTTGTTA+AGG + chr4_3:15430721-15430740 Msa0631950:intron 40.0%
GCATTCCCTTCCTTTGTTAA+GGG + chr4_3:15430722-15430741 Msa0631950:intron 40.0%
! CATCAAAGTGTCTAATCCAG+AGG + chr4_3:15430775-15430794 Msa0631950:CDS 40.0%
AACATTCCTTTACCCTACAG+GGG + chr4_3:15430914-15430933 Msa0631950:CDS 40.0%
! GAATTTTCCCATCTTCCAGA+AGG + chr4_3:15430965-15430984 Msa0631950:CDS 40.0%
TGCACGCATTATCTTGACTA+GGG - chr4_3:15431008-15431027 None:intergenic 40.0%
! GTGCAGCTGAAATTGATTTC+AGG + chr4_3:15431023-15431042 Msa0631950:CDS 40.0%
AGGTCCAAATATCTACGGAT+GGG - chr4_3:15431103-15431122 None:intergenic 40.0%
AAGGTCCAAATATCTACGGA+TGG - chr4_3:15431104-15431123 None:intergenic 40.0%
CAGTTATGTTCGTGTAGAAG+CGG + chr4_3:15431803-15431822 Msa0631950:intron 40.0%
TTCGTGTAGAAGCGGTATTT+GGG + chr4_3:15431811-15431830 Msa0631950:intron 40.0%
AGATTACCAGATGTAAAGGG+TGG - chr4_3:15432081-15432100 None:intergenic 40.0%
ATGAGAAAGTTAGAGCAGTG+AGG + chr4_3:15432124-15432143 Msa0631950:CDS 40.0%
AGGACAATTATCGAATGGCA+CGG - chr4_3:15432322-15432341 None:intergenic 40.0%
TATGCTGCTACATTCTCAGT+AGG - chr4_3:15432342-15432361 None:intergenic 40.0%
GACAGGATAGTGATATACAC+TGG + chr4_3:15432373-15432392 Msa0631950:intron 40.0%
!! TCTCTGGAATACATGGATGA+GGG - chr4_3:15432504-15432523 None:intergenic 40.0%
!! ATCTCTGGAATACATGGATG+AGG - chr4_3:15432505-15432524 None:intergenic 40.0%
!! TTCTGGATCTCTGGAATACA+TGG - chr4_3:15432511-15432530 None:intergenic 40.0%
! GATAGAATGTTCTGGATCTC+TGG - chr4_3:15432520-15432539 None:intergenic 40.0%
AGGCTAAGGATAGAATGTTC+TGG - chr4_3:15432528-15432547 None:intergenic 40.0%
! TAGTTGTGTCGATGGCATAT+TGG + chr4_3:15432691-15432710 Msa0631950:intron 40.0%
AATAAGACTGGGAGAACTGA+TGG + chr4_3:15432856-15432875 Msa0631950:intron 40.0%
!! TAAGTGGAAATCACTGGCTT+AGG - chr4_3:15433018-15433037 None:intergenic 40.0%
TGAGTTCGCCTAAGGAATTA+GGG - chr4_3:15433116-15433135 None:intergenic 40.0%
TTGAGTTCGCCTAAGGAATT+AGG - chr4_3:15433117-15433136 None:intergenic 40.0%
GAGTATGTTCAGATAACCTC+GGG + chr4_3:15433247-15433266 Msa0631950:intron 40.0%
CTGCAAACGAGAATCATCTT+AGG - chr4_3:15433328-15433347 None:intergenic 40.0%
CTAAGATGATTCTCGTTTGC+AGG + chr4_3:15433326-15433345 Msa0631950:intron 40.0%
TTGGATTTCAAGCTACTGCT+TGG + chr4_3:15433349-15433368 Msa0631950:CDS 40.0%
TGGATTTCAAGCTACTGCTT+GGG + chr4_3:15433350-15433369 Msa0631950:CDS 40.0%
TCTCAGTTGGATCACAGATA+GGG + chr4_3:15433373-15433392 Msa0631950:CDS 40.0%
TATGTGAAGGAGGTTGTAAG+AGG + chr4_3:15433447-15433466 Msa0631950:CDS 40.0%
TGCTCTCAAATGAAAGAGTG+TGG - chr4_3:15433561-15433580 None:intergenic 40.0%
! CATTTTCTCTAAGCATGCAG+TGG + chr4_3:15433760-15433779 Msa0631950:intron 40.0%
!! AATAATGGGCAAACTATCGG+CGG - chr4_3:15433810-15433829 None:intergenic 40.0%
!! TTCGATCATAGTGGATATGG+AGG + chr4_3:15434149-15434168 Msa0631950:three_prime_UTR 40.0%
CGATGATTCGATATCAACCA+AGG + chr4_3:15434197-15434216 Msa0631950:three_prime_UTR 40.0%
! GTAACAACTTTAGGAATCGC+AGG - chr4_3:15434247-15434266 None:intergenic 40.0%
AGCTATGAGTGAGTGAAGGT+AGG - chr4_3:15421164-15421183 None:intergenic 45.0%
TTGGAGCTATGAGTGAGTGA+AGG - chr4_3:15421168-15421187 None:intergenic 45.0%
GCCATTGAAGAAGGTTTCAG+AGG - chr4_3:15421195-15421214 None:intergenic 45.0%
TTGAGTATGGCAGACATAGC+AGG - chr4_3:15421343-15421362 None:intergenic 45.0%
TGATGGAGCGAGTTTGAGTA+TGG - chr4_3:15421356-15421375 None:intergenic 45.0%
! GGTTTCGAAGAGGCTTTTGA+TGG - chr4_3:15421373-15421392 None:intergenic 45.0%
AAGCCTCTTCGAAACCGTTA+TGG + chr4_3:15421377-15421396 Msa0631950:CDS 45.0%
CTTCCATAACGGTTTCGAAG+AGG - chr4_3:15421383-15421402 None:intergenic 45.0%
CAATTCACACAGAGGACGTT+TGG + chr4_3:15422252-15422271 Msa0631950:intron 45.0%
! ACTCACTATCACAAAGGCAC+TGG + chr4_3:15422732-15422751 Msa0631950:intron 45.0%
TGCAACTACATGTGTCAGTG+TGG + chr4_3:15422811-15422830 Msa0631950:intron 45.0%
!!! TGTCAGTGTGGTTTTGGTGT+TGG + chr4_3:15422823-15422842 Msa0631950:intron 45.0%
GAAACACTGTCAAAATCCGG+AGG + chr4_3:15423416-15423435 Msa0631950:intron 45.0%
ACAGCAAAACCAAAAGGAGG+AGG - chr4_3:15423500-15423519 None:intergenic 45.0%
TTACCGCTTTCCCATTGCTT+TGG + chr4_3:15423617-15423636 Msa0631950:intron 45.0%
! GTGAAGCGTTCCTTGCAAAA+AGG + chr4_3:15423713-15423732 Msa0631950:CDS 45.0%
ATCCAGTTCTTCTTGCCATC+AGG - chr4_3:15423797-15423816 None:intergenic 45.0%
TGATGGCAAGAAGAACTGGA+TGG + chr4_3:15423796-15423815 Msa0631950:CDS 45.0%
GAACTGGATGGTTTCAGATC+AGG + chr4_3:15423808-15423827 Msa0631950:CDS 45.0%
!! TGTCACTTGTTGTGGCTTGA+TGG - chr4_3:15423983-15424002 None:intergenic 45.0%
TCAGAAAGCTCAGGACAACA+TGG + chr4_3:15424056-15424075 Msa0631950:CDS 45.0%
AGCCATCTCTTCAACTGTCA+CGG - chr4_3:15424222-15424241 None:intergenic 45.0%
TGAGCAGAATAACTCTCGAG+AGG - chr4_3:15424344-15424363 None:intergenic 45.0%
TAACTGCTATAGCTGTCTCG+TGG - chr4_3:15424807-15424826 None:intergenic 45.0%
!! AAAGACCCATTTGATGACGG+TGG - chr4_3:15424843-15424862 None:intergenic 45.0%
GGACATTTCTCCAGTACTAC+GGG - chr4_3:15425010-15425029 None:intergenic 45.0%
GGGACATTTCTCCAGTACTA+CGG - chr4_3:15425011-15425030 None:intergenic 45.0%
! GGATTGTGGATACCCCTTTT+TGG + chr4_3:15425074-15425093 Msa0631950:intron 45.0%
ACAGTAGAAAAGCGGACAGA+CGG + chr4_3:15425407-15425426 Msa0631950:intron 45.0%
TCAGTATGGATACACCCTAC+CGG + chr4_3:15425515-15425534 Msa0631950:intron 45.0%
ACCTTCCAAATCTTCGTGGA+AGG + chr4_3:15426276-15426295 Msa0631950:CDS 45.0%
TCCTTCCACGAAGATTTGGA+AGG - chr4_3:15426280-15426299 None:intergenic 45.0%
CTCATCCTTCCACGAAGATT+TGG - chr4_3:15426284-15426303 None:intergenic 45.0%
CAAATCTTCGTGGAAGGATG+AGG + chr4_3:15426282-15426301 Msa0631950:CDS 45.0%
ACGAGAGAGGCTGATCTTTA+TGG + chr4_3:15426621-15426640 Msa0631950:intron 45.0%
GGTTGAATGCCTAGAGTATG+AGG + chr4_3:15426696-15426715 Msa0631950:intron 45.0%
AACGGCCTACTATCTTGAGA+TGG - chr4_3:15426791-15426810 None:intergenic 45.0%
! GTATCTGCAAGAAGCATGGA+GGG - chr4_3:15426859-15426878 None:intergenic 45.0%
! AGTATCTGCAAGAAGCATGG+AGG - chr4_3:15426860-15426879 None:intergenic 45.0%
GAGAATTCCCACTGATCACT+TGG + chr4_3:15426979-15426998 Msa0631950:CDS 45.0%
GATCTCTTCCAAGTGATCAG+TGG - chr4_3:15426990-15427009 None:intergenic 45.0%
AGATTCATCTGATCCAGACG+AGG + chr4_3:15427036-15427055 Msa0631950:CDS 45.0%
ATGTATTCAAGCAGGGCTGA+TGG + chr4_3:15427513-15427532 Msa0631950:intron 45.0%
GTTGGCGTAGTACCCTATTA+TGG + chr4_3:15427743-15427762 Msa0631950:intron 45.0%
AGATGGTAGAATCCTCCCTT+AGG + chr4_3:15427769-15427788 Msa0631950:intron 45.0%
ACGATCAAACTTCCTAAGGG+AGG - chr4_3:15427784-15427803 None:intergenic 45.0%
GCTTGGTAAAAACATGCCCT+TGG - chr4_3:15428094-15428113 None:intergenic 45.0%
TATCCTACTGAGCGATAAGG+TGG + chr4_3:15428157-15428176 Msa0631950:intron 45.0%
CCAGCTTTCTACGCGAAATT+TGG - chr4_3:15428320-15428339 None:intergenic 45.0%
CCAAATTTCGCGTAGAAAGC+TGG + chr4_3:15428317-15428336 Msa0631950:intron 45.0%
CATCAATGGCATAGACCTTC+AGG - chr4_3:15428564-15428583 None:intergenic 45.0%
TCTCAAACTCATAGCTCCCA+TGG - chr4_3:15428963-15428982 None:intergenic 45.0%
! GGAGCTATGAGTTTGAGACA+AGG + chr4_3:15428965-15428984 Msa0631950:CDS 45.0%
! TATGAGTTTGAGACAAGGGG+AGG + chr4_3:15428970-15428989 Msa0631950:CDS 45.0%
TCAGTTGTGCTGCATGATGA+TGG + chr4_3:15429013-15429032 Msa0631950:CDS 45.0%
TGCAACATAGCACAGTTGAG+TGG - chr4_3:15429116-15429135 None:intergenic 45.0%
GGTATCAGAGCCTATCGTTT+CGG + chr4_3:15429375-15429394 Msa0631950:intron 45.0%
GTATCAGAGCCTATCGTTTC+GGG + chr4_3:15429376-15429395 Msa0631950:intron 45.0%
CAAAACCGGATCATAAGGTG+AGG - chr4_3:15429512-15429531 None:intergenic 45.0%
! TGTCTGAGGCTGCAAATCTT+CGG + chr4_3:15429901-15429920 Msa0631950:CDS 45.0%
AAAAGAAGGAACCTACCTGC+TGG - chr4_3:15429941-15429960 None:intergenic 45.0%
CTGCACCCTTAACAAAGGAA+GGG - chr4_3:15430730-15430749 None:intergenic 45.0%
ACTGCACCCTTAACAAAGGA+AGG - chr4_3:15430731-15430750 None:intergenic 45.0%
CAGAGACTAATCGCATTGCA+GGG - chr4_3:15430844-15430863 None:intergenic 45.0%
TCAGAGACTAATCGCATTGC+AGG - chr4_3:15430845-15430864 None:intergenic 45.0%
! TCTGAGATGATGATCCTCTG+TGG + chr4_3:15430860-15430879 Msa0631950:CDS 45.0%
GGCGAAGCTATAGCTACATT+TGG + chr4_3:15430881-15430900 Msa0631950:CDS 45.0%
CTGCACGCATTATCTTGACT+AGG - chr4_3:15431009-15431028 None:intergenic 45.0%
CAAATATCTACGGATGGGAG+AGG - chr4_3:15431098-15431117 None:intergenic 45.0%
CTCTCCCATCCGTAGATATT+TGG + chr4_3:15431096-15431115 Msa0631950:CDS 45.0%
GGACCTTCTTGCTCATTATC+AGG + chr4_3:15431117-15431136 Msa0631950:CDS 45.0%
TTGCGAAATCAGCAAGAGTC+AGG + chr4_3:15431220-15431239 Msa0631950:intron 45.0%
AGCAAGAGTCAGGATACTGA+AGG + chr4_3:15431230-15431249 Msa0631950:intron 45.0%
GTTCGTGTAGAAGCGGTATT+TGG + chr4_3:15431810-15431829 Msa0631950:intron 45.0%
!! CTGTCTGTTTTGGATGTGTC+TGG + chr4_3:15432006-15432025 Msa0631950:intron 45.0%
TTACCAGATGTAAAGGGTGG+CGG - chr4_3:15432078-15432097 None:intergenic 45.0%
! GCACGGTATCTTCTCTCTTT+TGG - chr4_3:15432204-15432223 None:intergenic 45.0%
GTGATTCCTGCAAATACTGC+AGG - chr4_3:15433146-15433165 None:intergenic 45.0%
ACACGTATGAGTAATACCCG+AGG - chr4_3:15433266-15433285 None:intergenic 45.0%
GATGATTCTCGTTTGCAGGT+TGG + chr4_3:15433330-15433349 Msa0631950:intron 45.0%
GTCTCAGTTGGATCACAGAT+AGG + chr4_3:15433372-15433391 Msa0631950:CDS 45.0%
CTCAGTTGGATCACAGATAG+GGG + chr4_3:15433374-15433393 Msa0631950:CDS 45.0%
ACAGATAGGGGATGAAGTAG+TGG + chr4_3:15433386-15433405 Msa0631950:CDS 45.0%
AGGGGATGAAGTAGTGGTTA+AGG + chr4_3:15433392-15433411 Msa0631950:CDS 45.0%
AAGCTGACTGGGAGTTAACA+AGG - chr4_3:15433587-15433606 None:intergenic 45.0%
TTGTTAACTCCCAGTCAGCT+TGG + chr4_3:15433586-15433605 Msa0631950:three_prime_UTR 45.0%
! GTACAACCTCGTCTTTTGCA+TGG + chr4_3:15433617-15433636 Msa0631950:three_prime_UTR 45.0%
TGCAGTGGCATAAAGTTAGC+AGG + chr4_3:15433775-15433794 Msa0631950:three_prime_UTR 45.0%
!!! GGCTGAGGGCATTTTGTTTT+TGG + chr4_3:15433916-15433935 Msa0631950:three_prime_UTR 45.0%
!!! TAAATAAAAATTTCTTTTAA+TGG - chr4_3:15427910-15427929 None:intergenic 5.0%
!!! AAAAGAAATTTTTATTTAAA+TGG + chr4_3:15427912-15427931 Msa0631950:intron 5.0%
!! AAACTAAAATATAATATATT+TGG - chr4_3:15431888-15431907 None:intergenic 5.0%
!!! TATTATATAATATTTTTCAT+AGG + chr4_3:15432296-15432315 Msa0631950:intron 5.0%
GCTCGAACAGCCATTGAAGA+AGG - chr4_3:15421204-15421223 None:intergenic 50.0%
AGTATGGCAGACATAGCAGG+AGG - chr4_3:15421340-15421359 None:intergenic 50.0%
GCACGTGCTTTGTGGAATTG+CGG + chr4_3:15422191-15422210 Msa0631950:intron 50.0%
!!! GTGGTTTTGGTGTTGGACAC+TGG + chr4_3:15422830-15422849 Msa0631950:intron 50.0%
GGGCCAAATATTTAGGGGCA+GGG - chr4_3:15422941-15422960 None:intergenic 50.0%
AGGGCCAAATATTTAGGGGC+AGG - chr4_3:15422942-15422961 None:intergenic 50.0%
GACCTGATGGCAAGAAGAAC+TGG + chr4_3:15423792-15423811 Msa0631950:CDS 50.0%
GTCCGTGACAGTTGAAGAGA+TGG + chr4_3:15424217-15424236 Msa0631950:CDS 50.0%
GACAGTTGAAGAGATGGCTG+AGG + chr4_3:15424223-15424242 Msa0631950:CDS 50.0%
GGTCACCACCGTCATCAAAT+GGG + chr4_3:15424835-15424854 Msa0631950:intron 50.0%
TGGAGTTTCTCCCGTAGTAC+TGG + chr4_3:15424997-15425016 Msa0631950:intron 50.0%
!!! GTGGATACCCCTTTTTGGGT+TGG + chr4_3:15425079-15425098 Msa0631950:intron 50.0%
CAGTAGAAAAGCGGACAGAC+GGG + chr4_3:15425408-15425427 Msa0631950:intron 50.0%
GCGTAAGACCCTCATACTCT+AGG - chr4_3:15426708-15426727 None:intergenic 50.0%
! GAGGGGGCACAAGACAAAAT+AGG + chr4_3:15427715-15427734 Msa0631950:intron 50.0%
TGGTAGGTGTGGTCAACCAA+GGG + chr4_3:15428075-15428094 Msa0631950:intron 50.0%
AGACCACCTTATCGCTCAGT+AGG - chr4_3:15428163-15428182 None:intergenic 50.0%
ACTGAGCGATAAGGTGGTCT+AGG + chr4_3:15428163-15428182 Msa0631950:intron 50.0%
! AGGAACATGCGGGTTGTTGA+AGG + chr4_3:15428189-15428208 Msa0631950:intron 50.0%
GTTCTTAATGGCACACAGGG+AGG + chr4_3:15428871-15428890 Msa0631950:intron 50.0%
! GCTCCCATGGCAAGATTTTC+TGG - chr4_3:15428950-15428969 None:intergenic 50.0%
!! TTGTGCTGCATGATGATGGC+AGG + chr4_3:15429017-15429036 Msa0631950:CDS 50.0%
! CCAACACTATTGGGCTTGGT+GGG - chr4_3:15429405-15429424 None:intergenic 50.0%
CCACCAAGCCCAATAGTGTT+GGG + chr4_3:15429403-15429422 Msa0631950:intron 50.0%
GCACTCCTCACCTTATGATC+CGG + chr4_3:15429504-15429523 Msa0631950:intron 50.0%
! ATCTGGGATTCGAGGAGCTT+TGG + chr4_3:15430227-15430246 Msa0631950:intron 50.0%
! AGGAGCTTTGGTCTATCCCA+TGG + chr4_3:15430239-15430258 Msa0631950:intron 50.0%
CTCGACTGCACCCTTAACAA+AGG - chr4_3:15430735-15430754 None:intergenic 50.0%
!! ATTGATGGCTCTGGATCCTC+TGG - chr4_3:15430794-15430813 None:intergenic 50.0%
TAGCTATAGCTTCGCCACAG+AGG - chr4_3:15430877-15430896 None:intergenic 50.0%
GATTGAGGTTGTCCCCTGTA+GGG - chr4_3:15430929-15430948 None:intergenic 50.0%
TGATTGAGGTTGTCCCCTGT+AGG - chr4_3:15430930-15430949 None:intergenic 50.0%
! AACAGGCCCTTCTGGAAGAT+GGG - chr4_3:15430975-15430994 None:intergenic 50.0%
! TAACAGGCCCTTCTGGAAGA+TGG - chr4_3:15430976-15430995 None:intergenic 50.0%
ATCTTCCAGAAGGGCCTGTT+AGG + chr4_3:15430975-15430994 Msa0631950:CDS 50.0%
ACTAGGGCAAAGCTCCTAAC+AGG - chr4_3:15430992-15431011 None:intergenic 50.0%
TAGTTCCCTTCACAAGGGAC+AGG + chr4_3:15431280-15431299 Msa0631950:intron 50.0%
AATCTCGAAGGTCTAGCAGC+AGG + chr4_3:15432096-15432115 Msa0631950:CDS 50.0%
! CCAGTAACGGAGACTACTGT+TGG - chr4_3:15432157-15432176 None:intergenic 50.0%
CCAACAGTAGTCTCCGTTAC+TGG + chr4_3:15432154-15432173 Msa0631950:CDS 50.0%
TCGCATTGCAGCTCTGTTGT+TGG + chr4_3:15432248-15432267 Msa0631950:CDS 50.0%
! TGCAGCTCTGTTGTTGGTTG+AGG + chr4_3:15432254-15432273 Msa0631950:CDS 50.0%
GTCTGGATTGAGTTCGCCTA+AGG - chr4_3:15433124-15433143 None:intergenic 50.0%
TCCAGACCTGCAGTATTTGC+AGG + chr4_3:15433137-15433156 Msa0631950:intron 50.0%
TCCTGCAAATACTGCAGGTC+TGG - chr4_3:15433141-15433160 None:intergenic 50.0%
GCACTTCCATGCAAAAGACG+AGG - chr4_3:15433626-15433645 None:intergenic 50.0%
AGAGAGAAGGGGAGGAAGGA+CGG - chr4_3:15421248-15421267 None:intergenic 55.0%
AGGAGGATGGAAGCGGAGAA+CGG - chr4_3:15421313-15421332 None:intergenic 55.0%
TGGCAGACATAGCAGGAGGA+GGG - chr4_3:15421336-15421355 None:intergenic 55.0%
ATGGCAGACATAGCAGGAGG+AGG - chr4_3:15421337-15421356 None:intergenic 55.0%
TGTGAGACTGTGGACCCGTT+TGG + chr4_3:15421654-15421673 Msa0631950:intron 55.0%
TGACCGGGCAATTCACACAG+AGG + chr4_3:15422244-15422263 Msa0631950:intron 55.0%
CGTCCTCTGTGTGAATTGCC+CGG - chr4_3:15422250-15422269 None:intergenic 55.0%
GCAGTAGCTCAGAGACCTGA+TGG + chr4_3:15423779-15423798 Msa0631950:CDS 55.0%
TCTACCTGCTCACTTGGTCG+AGG - chr4_3:15424437-15424456 None:intergenic 55.0%
CGGTCACCACCGTCATCAAA+TGG + chr4_3:15424834-15424853 Msa0631950:intron 55.0%
GAGTGGCACCTCACAAGCAT+TGG - chr4_3:15425663-15425682 None:intergenic 55.0%
AGTGGGCAGCCTAGCTACAT+TGG + chr4_3:15425846-15425865 Msa0631950:intron 55.0%
CTGGTAGGTGTGGTCAACCA+AGG + chr4_3:15428074-15428093 Msa0631950:intron 55.0%
GAGCGATAAGGTGGTCTAGG+AGG + chr4_3:15428166-15428185 Msa0631950:intron 55.0%
CGATAAGGTGGTCTAGGAGG+AGG + chr4_3:15428169-15428188 Msa0631950:intron 55.0%
GGTCTAGGAGGAGGAACATG+CGG + chr4_3:15428178-15428197 Msa0631950:intron 55.0%
GTCTAGGAGGAGGAACATGC+GGG + chr4_3:15428179-15428198 Msa0631950:intron 55.0%
CACAGGGAGGCTATGAGAAG+AGG + chr4_3:15428884-15428903 Msa0631950:intron 55.0%
!! ACACTATTGGGCTTGGTGGG+TGG - chr4_3:15429402-15429421 None:intergenic 55.0%
CCCACCAAGCCCAATAGTGT+TGG + chr4_3:15429402-15429421 Msa0631950:intron 55.0%
CCCAACACTATTGGGCTTGG+TGG - chr4_3:15429406-15429425 None:intergenic 55.0%
ACGCCCAACACTATTGGGCT+TGG - chr4_3:15429409-15429428 None:intergenic 55.0%
CCCTCACGCCCAACACTATT+GGG - chr4_3:15429414-15429433 None:intergenic 55.0%
! CCCAATAGTGTTGGGCGTGA+GGG + chr4_3:15429411-15429430 Msa0631950:intron 55.0%
! CCAATAGTGTTGGGCGTGAG+GGG + chr4_3:15429412-15429431 Msa0631950:intron 55.0%
! CAATAGTGTTGGGCGTGAGG+GGG + chr4_3:15429413-15429432 Msa0631950:intron 55.0%
AGAAGGAACCTACCTGCTGG+CGG - chr4_3:15429938-15429957 None:intergenic 55.0%
GGTTGTCCCCTGTAGGGTAA+AGG - chr4_3:15430923-15430942 None:intergenic 55.0%
AAGCTCCTAACAGGCCCTTC+TGG - chr4_3:15430983-15431002 None:intergenic 55.0%
CAGGAATTCCCAAAACCCCG+TGG - chr4_3:15431060-15431079 None:intergenic 55.0%
!!! CACGGGGTTTTGGGAATTCC+TGG + chr4_3:15431058-15431077 Msa0631950:CDS 55.0%
TGCGTCCTGTCCCTTGTGAA+GGG - chr4_3:15431288-15431307 None:intergenic 55.0%
GACGCAGGATGGGACAGTTT+GGG + chr4_3:15431302-15431321 Msa0631950:intron 55.0%
GCTACTGCTTGGGTCTCAGT+TGG + chr4_3:15433360-15433379 Msa0631950:CDS 55.0%
CCGAACTAGCCAAGCTGACT+GGG - chr4_3:15433598-15433617 None:intergenic 55.0%
! CCCAGTCAGCTTGGCTAGTT+CGG + chr4_3:15433595-15433614 Msa0631950:three_prime_UTR 55.0%
ACCGAACTAGCCAAGCTGAC+TGG - chr4_3:15433599-15433618 None:intergenic 55.0%
GAAGTGCGATCACGCTTCAC+TGG + chr4_3:15433639-15433658 Msa0631950:three_prime_UTR 55.0%
AATGGGCAAACTATCGGCGG+TGG - chr4_3:15433807-15433826 None:intergenic 55.0%
GGAAGGACGGAGGATCGAGT+AGG - chr4_3:15421235-15421254 None:intergenic 60.0%
GTGGAGAGAGAAGGGGAGGA+AGG - chr4_3:15421252-15421271 None:intergenic 60.0%
GACTGTGGAGAGAGAAGGGG+AGG - chr4_3:15421256-15421275 None:intergenic 60.0%
GGGGACTGTGGAGAGAGAAG+GGG - chr4_3:15421259-15421278 None:intergenic 60.0%
GGGGGACTGTGGAGAGAGAA+GGG - chr4_3:15421260-15421279 None:intergenic 60.0%
ATGGAAGCGGAGAACGGAGG+GGG - chr4_3:15421307-15421326 None:intergenic 60.0%
GATGGAAGCGGAGAACGGAG+GGG - chr4_3:15421308-15421327 None:intergenic 60.0%
GGATGGAAGCGGAGAACGGA+GGG - chr4_3:15421309-15421328 None:intergenic 60.0%
AGGATGGAAGCGGAGAACGG+AGG - chr4_3:15421310-15421329 None:intergenic 60.0%
AGGAGGGAGGAGGATGGAAG+CGG - chr4_3:15421320-15421339 None:intergenic 60.0%
ACATAGCAGGAGGAGGGAGG+AGG - chr4_3:15421330-15421349 None:intergenic 60.0%
CAGACATAGCAGGAGGAGGG+AGG - chr4_3:15421333-15421352 None:intergenic 60.0%
GTATCACATGCGGCCCCGTT+TGG - chr4_3:15421878-15421897 None:intergenic 60.0%
TGGACCTCGACCAAGTGAGC+AGG + chr4_3:15424430-15424449 Msa0631950:CDS 60.0%
! GCCCAATAGTGTTGGGCGTG+AGG + chr4_3:15429410-15429429 Msa0631950:intron 60.0%
CCCCTCACGCCCAACACTAT+TGG - chr4_3:15429415-15429434 None:intergenic 60.0%
GTTAAATTGGCGCCGCCAGC+AGG + chr4_3:15429923-15429942 Msa0631950:CDS 60.0%
TTCAGGAAGCCAGCACGCCA+CGG + chr4_3:15431040-15431059 Msa0631950:CDS 60.0%
CTGCGTCCTGTCCCTTGTGA+AGG - chr4_3:15431289-15431308 None:intergenic 60.0%
CTTCACAAGGGACAGGACGC+AGG + chr4_3:15431287-15431306 Msa0631950:intron 60.0%
ACAAGGGACAGGACGCAGGA+TGG + chr4_3:15431291-15431310 Msa0631950:intron 60.0%
CAAGGGACAGGACGCAGGAT+GGG + chr4_3:15431292-15431311 Msa0631950:intron 60.0%
GGACGCAGGATGGGACAGTT+TGG + chr4_3:15431301-15431320 Msa0631950:intron 60.0%
GAGCCGCCACCCTTTACATC+TGG + chr4_3:15432072-15432091 Msa0631950:CDS 60.0%
GAGAAGGGGAGGAAGGACGG+AGG - chr4_3:15421245-15421264 None:intergenic 65.0%
CGGGGGACTGTGGAGAGAGA+AGG - chr4_3:15421261-15421280 None:intergenic 65.0%
GGAGAAGAAGCGGGGGACTG+TGG - chr4_3:15421271-15421290 None:intergenic 65.0%
GGTGTGGGGAGAAGAAGCGG+GGG - chr4_3:15421278-15421297 None:intergenic 65.0%
CGGTGTGGGGAGAAGAAGCG+GGG - chr4_3:15421279-15421298 None:intergenic 65.0%
GCGGTGTGGGGAGAAGAAGC+GGG - chr4_3:15421280-15421299 None:intergenic 65.0%
GGCGGTGTGGGGAGAAGAAG+CGG - chr4_3:15421281-15421300 None:intergenic 65.0%
TGGAAGCGGAGAACGGAGGG+GGG - chr4_3:15421306-15421325 None:intergenic 65.0%
AGCAGGAGGAGGGAGGAGGA+TGG - chr4_3:15421326-15421345 None:intergenic 65.0%
GGTGGGTGGCCCGAAACGAT+AGG - chr4_3:15429388-15429407 None:intergenic 65.0%
AATTGGCGCCGCCAGCAGGT+AGG + chr4_3:15429927-15429946 Msa0631950:intron 65.0%
TCAGGAAGCCAGCACGCCAC+GGG + chr4_3:15431041-15431060 Msa0631950:CDS 65.0%
! CCAGCACGCCACGGGGTTTT+GGG + chr4_3:15431049-15431068 Msa0631950:CDS 65.0%
AGCGGAGAACGGAGGGGGGA+GGG - chr4_3:15421302-15421321 None:intergenic 70.0%
AAGCGGAGAACGGAGGGGGG+AGG - chr4_3:15421303-15421322 None:intergenic 70.0%
CAGGAAGCCAGCACGCCACG+GGG + chr4_3:15431042-15431061 Msa0631950:CDS 70.0%
! GCCAGCACGCCACGGGGTTT+TGG + chr4_3:15431048-15431067 Msa0631950:CDS 70.0%
CCCAAAACCCCGTGGCGTGC+TGG - chr4_3:15431052-15431071 None:intergenic 70.0%
GGAGAACGGAGGGGGGAGGG+CGG - chr4_3:15421299-15421318 None:intergenic 75.0%
! GGAGGGGGGAGGGCGGTGTG+GGG - chr4_3:15421292-15421311 None:intergenic 80.0%
! CGGAGGGGGGAGGGCGGTGT+GGG - chr4_3:15421293-15421312 None:intergenic 80.0%
! ACGGAGGGGGGAGGGCGGTG+TGG - chr4_3:15421294-15421313 None:intergenic 80.0%
Chromosome Type Strat End Strand Name
chr4_3 gene 15421150 15434274 15421150 ID=Msa0631950;Name=Msa0631950
chr4_3 mRNA 15421150 15434274 15421150 ID=Msa0631950-mRNA-1;Parent=Msa0631950;Name=Msa0631950-mRNA-1;_AED=0.14;_eAED=0.14;_QI=60|0.93|0.87|1|0.86|0.81|16|695|800
chr4_3 exon 15421150 15421469 15421150 ID=Msa0631950-mRNA-1:exon:4380;Parent=Msa0631950-mRNA-1
chr4_3 exon 15423673 15423829 15423673 ID=Msa0631950-mRNA-1:exon:4381;Parent=Msa0631950-mRNA-1
chr4_3 exon 15423964 15424077 15423964 ID=Msa0631950-mRNA-1:exon:4382;Parent=Msa0631950-mRNA-1
chr4_3 exon 15424167 15424244 15424167 ID=Msa0631950-mRNA-1:exon:4383;Parent=Msa0631950-mRNA-1
chr4_3 exon 15424320 15424477 15424320 ID=Msa0631950-mRNA-1:exon:4384;Parent=Msa0631950-mRNA-1
chr4_3 exon 15426165 15426390 15426165 ID=Msa0631950-mRNA-1:exon:4385;Parent=Msa0631950-mRNA-1
chr4_3 exon 15426875 15427057 15426875 ID=Msa0631950-mRNA-1:exon:4386;Parent=Msa0631950-mRNA-1
chr4_3 exon 15428538 15428600 15428538 ID=Msa0631950-mRNA-1:exon:4387;Parent=Msa0631950-mRNA-1
chr4_3 exon 15428702 15428808 15428702 ID=Msa0631950-mRNA-1:exon:4388;Parent=Msa0631950-mRNA-1
chr4_3 exon 15428889 15429038 15428889 ID=Msa0631950-mRNA-1:exon:4389;Parent=Msa0631950-mRNA-1
chr4_3 exon 15429785 15429944 15429785 ID=Msa0631950-mRNA-1:exon:4390;Parent=Msa0631950-mRNA-1
chr4_3 exon 15430743 15431138 15430743 ID=Msa0631950-mRNA-1:exon:4391;Parent=Msa0631950-mRNA-1
chr4_3 exon 15432051 15432275 15432051 ID=Msa0631950-mRNA-1:exon:4392;Parent=Msa0631950-mRNA-1
chr4_3 exon 15433348 15433697 15433348 ID=Msa0631950-mRNA-1:exon:4393;Parent=Msa0631950-mRNA-1
chr4_3 exon 15433772 15434087 15433772 ID=Msa0631950-mRNA-1:exon:4394;Parent=Msa0631950-mRNA-1
chr4_3 exon 15434120 15434274 15434120 ID=Msa0631950-mRNA-1:exon:4395;Parent=Msa0631950-mRNA-1
chr4_3 five_prime_UTR 15421150 15421209 15421150 ID=Msa0631950-mRNA-1:five_prime_utr;Parent=Msa0631950-mRNA-1
chr4_3 CDS 15421210 15421469 15421210 ID=Msa0631950-mRNA-1:cds;Parent=Msa0631950-mRNA-1
chr4_3 CDS 15423673 15423829 15423673 ID=Msa0631950-mRNA-1:cds;Parent=Msa0631950-mRNA-1
chr4_3 CDS 15423964 15424077 15423964 ID=Msa0631950-mRNA-1:cds;Parent=Msa0631950-mRNA-1
chr4_3 CDS 15424167 15424244 15424167 ID=Msa0631950-mRNA-1:cds;Parent=Msa0631950-mRNA-1
chr4_3 CDS 15424320 15424477 15424320 ID=Msa0631950-mRNA-1:cds;Parent=Msa0631950-mRNA-1
chr4_3 CDS 15426165 15426390 15426165 ID=Msa0631950-mRNA-1:cds;Parent=Msa0631950-mRNA-1
chr4_3 CDS 15426875 15427057 15426875 ID=Msa0631950-mRNA-1:cds;Parent=Msa0631950-mRNA-1
chr4_3 CDS 15428538 15428600 15428538 ID=Msa0631950-mRNA-1:cds;Parent=Msa0631950-mRNA-1
chr4_3 CDS 15428702 15428808 15428702 ID=Msa0631950-mRNA-1:cds;Parent=Msa0631950-mRNA-1
chr4_3 CDS 15428889 15429038 15428889 ID=Msa0631950-mRNA-1:cds;Parent=Msa0631950-mRNA-1
chr4_3 CDS 15429785 15429944 15429785 ID=Msa0631950-mRNA-1:cds;Parent=Msa0631950-mRNA-1
chr4_3 CDS 15430743 15431138 15430743 ID=Msa0631950-mRNA-1:cds;Parent=Msa0631950-mRNA-1
chr4_3 CDS 15432051 15432275 15432051 ID=Msa0631950-mRNA-1:cds;Parent=Msa0631950-mRNA-1
chr4_3 CDS 15433348 15433473 15433348 ID=Msa0631950-mRNA-1:cds;Parent=Msa0631950-mRNA-1
chr4_3 three_prime_UTR 15433474 15433697 15433474 ID=Msa0631950-mRNA-1:three_prime_utr;Parent=Msa0631950-mRNA-1
chr4_3 three_prime_UTR 15433772 15434087 15433772 ID=Msa0631950-mRNA-1:three_prime_utr;Parent=Msa0631950-mRNA-1
chr4_3 three_prime_UTR 15434120 15434274 15434120 ID=Msa0631950-mRNA-1:three_prime_utr;Parent=Msa0631950-mRNA-1
Gene Sequence

>Msa0631950

ATGGCTGTTCGAGCAGTTAACACCTACTCGATCCTCCGTCCTTCCTCCCCTTCTCTCTCCACAGTCCCCCGCTTCTTCTCCCCACACCGCCCTCCCCCCTCCGTTCTCCGCTTCCATCCTCCTCCCTCCTCCTGCTATGTCTGCCATACTCAAACTCGCTCCATCAAAAGCCTCTTCGAAACCGTTATGGAAGAACTTCAAGCCAAACGTAAACTCCGCAAGAAAATTGTTTCCGTTAACGCTTCTTCTTCTTCGTCAAACACGGAACTATTGAATGAAGAGCATGTTGAAGATAGACTTGTGAAGCGTTCCTTGCAAAAAGGTTTGCTTTTGGAATTCAAGAAAGATTCTGATAAAATATTGCTAGCAGTAGCTCAGAGACCTGATGGCAAGAAGAACTGGATGGTTTCAGATCAGAATGGTGTCACTAGTTCCATCAAGCCACAACAAGTGACATATATTGTTCCCGGCATATCCAATTTTGACCAAGCAGATATCGCACATTTTGTTCAGAAAGCTCAGGACAACATGGACCCATCACTACTTGAATTTGCTTGGTTTGAGCTACATGAAAAGAATAAGTCCGTGACAGTTGAAGAGATGGCTGAGATAATTTTTGGTTGTATTGAGCCTCTCGAGAGTTATTCTGCTCATCTCTTGCTATCAAAAGACGAAATATACTTTACTATACTCGAATCGAAAGGATTGCGTTGCGTTTATGGACCTCGACCAAGTGAGCAGGTAGATGTATTACTCTCAGATGTAGAGAAGGTTGAGGAGCTTATTCGTAGAAAGGTTGCAAAGGAAGCTGCTGAGAAAGAATTTCAGAACTTCATTAAACTATTATGCTCTGCAAAATCAAGGCCTTCACATGATAAACCTTCCAAATCTTCGTGGAAGGATGAGGAGAAAATTTGGAGCAGAATTGAGTCACTTGAAGCATATGCTATTGATGCTTGTATAAGTGATGAACAAAGGAAAACAGCTGGGATAATACTAAAGGAAATGGGTCTGGCAAAAACATCATCATCAGCTGTAAATCTTTTGATAGATATTGGATATTTTCCTATACATGTCAATCTTGATTTGTTGAAGTTGAGAATTCCCACTGATCACTTGGAAGAGATCACATCAGCTGCTCAAAGTCTTCTATCAGATTCATCTGATCCAGACGAGATTAACAGGAAGAACCTTACTAACCTGAAGGTCTATGCCATTGATGTTGATGAAGCTGATGAGCTTGATGATGCTCTGAGTGCAACAAAGTTACAAGATGGTCGGATTAACATTTGGATACATGTTGCAGACGCAACTAGATATGTTCAACCTGGAAGTATTGTGGATAGGGAGGCTATGAGAAGAGGAACTTCTGTTTTCTTGCCCACTGCTACATATTCTATGTTTCCAGAAAATCTTGCCATGGGAGCTATGAGTTTGAGACAAGGGGAGGTTTGTAATGCTGTTACTGTATCAGTTGTGCTGCATGATGATGGCAGCATTGCAGAATGTTCAGTGTTCAACTCAGTGATTAAACCAACGTACATGTTAACATATGAGAGCGCATCAGAGCTACTCAATTTGAACCTTGAAGAGGAGGTTGAACTTAGAATTTTGTCTGAGGCTGCAAATCTTCGGTTAAATTGGCGCCGCCAGCAGGGTGCAGTCGAGACAGCAACATTAGAAGCTCGCATCAAAGTGTCTAATCCAGAGGATCCAGAGCCATCAATAAACCTTTATGTAGAAAATCAGGCAGACCCTGCAATGCGATTAGTCTCTGAGATGATGATCCTCTGTGGCGAAGCTATAGCTACATTTGGATCTCGGAATAACATTCCTTTACCCTACAGGGGACAACCTCAATCAGATATAAATCTTTCTGAATTTTCCCATCTTCCAGAAGGGCCTGTTAGGAGCTTTGCCCTAGTCAAGATAATGCGTGCAGCTGAAATTGATTTCAGGAAGCCAGCACGCCACGGGGTTTTGGGAATTCCTGGTTATGTTCAATTTACCTCTCCCATCCGTAGATATTTGGACCTTCTTGCTCATTATCAGATAAAGGCATTTCTTAGAGGCGAGCCGCCACCCTTTACATCTGGTAATCTCGAAGGTCTAGCAGCAGGTGTAAATGAGAAAGTTAGAGCAGTGAGGAAGCTCTCCAACAGTAGTCTCCGTTACTGGATACTAGAATACTTACGAAAACAACCAAAAGAGAGAAGATACCGTGCTTTAGTCCTTAAATTTTTGAAAGATCGCATTGCAGCTCTGTTGTTGGTTGAGGTTGGATTTCAAGCTACTGCTTGGGTCTCAGTTGGATCACAGATAGGGGATGAAGTAGTGGTTAAGGTTGAACAGTCACATCCACGTGACGATATTATTTATGTGAAGGAGGTTGTAAGAGGTTGA
Protein sequence

>Msa0631950

MAVRAVNTYSILRPSSPSLSTVPRFFSPHRPPPSVLRFHPPPSSCYVCHTQTRSIKSLFETVMEELQAKRKLRKKIVSVNASSSSSNTELLNEEHVEDRLVKRSLQKGLLLEFKKDSDKILLAVAQRPDGKKNWMVSDQNGVTSSIKPQQVTYIVPGISNFDQADIAHFVQKAQDNMDPSLLEFAWFELHEKNKSVTVEEMAEIIFGCIEPLESYSAHLLLSKDEIYFTILESKGLRCVYGPRPSEQVDVLLSDVEKVEELIRRKVAKEAAEKEFQNFIKLLCSAKSRPSHDKPSKSSWKDEEKIWSRIESLEAYAIDACISDEQRKTAGIILKEMGLAKTSSSAVNLLIDIGYFPIHVNLDLLKLRIPTDHLEEITSAAQSLLSDSSDPDEINRKNLTNLKVYAIDVDEADELDDALSATKLQDGRINIWIHVADATRYVQPGSIVDREAMRRGTSVFLPTATYSMFPENLAMGAMSLRQGEVCNAVTVSVVLHDDGSIAECSVFNSVIKPTYMLTYESASELLNLNLEEEVELRILSEAANLRLNWRRQQGAVETATLEARIKVSNPEDPEPSINLYVENQADPAMRLVSEMMILCGEAIATFGSRNNIPLPYRGQPQSDINLSEFSHLPEGPVRSFALVKIMRAAEIDFRKPARHGVLGIPGYVQFTSPIRRYLDLLAHYQIKAFLRGEPPPFTSGNLEGLAAGVNEKVRAVRKLSNSSLRYWILEYLRKQPKERRYRALVLKFLKDRIAALLLVEVGFQATAWVSVGSQIGDEVVVKVEQSHPRDDIIYVKEVVRG*