AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar zhongmu-4 / Msa0495510


Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0495510 MtrunA17_Chr3g0089201 96.579 380 8 2 1 375 1 380 0.0 739
Msa0495510 MtrunA17_Chr3g0089221 99.528 212 1 0 164 375 1 212 1.19e-153 431
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0495510 AT3G08010.1 67.102 383 109 4 1 375 1 374 0.0 526

Find 97 sgRNAs with CRISPR-Local

Find 308 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
TCAAATGATGCTTATATTTA+AGG 0.043632 3_4:-24962029 None:intergenic
CAGAACATGTTTGGAGTTTA+AGG 0.122876 3_4:-24956921 None:intergenic
CTGAGGATTGTATTGGCTTC+TGG 0.212413 3_4:+24961843 Msa0495510:CDS
CTAAAGAAGCGAATGTTTCT+AGG 0.224379 3_4:-24957246 None:intergenic
ATACTATTAATAACATTATT+AGG 0.258304 3_4:-24957171 None:intergenic
AATCATACTCACCCGTTTAC+TGG 0.258872 3_4:-24958852 None:intergenic
GAAAGATTTGGATATGGTTC+TGG 0.270200 3_4:+24960723 Msa0495510:CDS
TTAAGGGCAGAGGTAGTAAA+AGG 0.279249 3_4:-24962012 None:intergenic
CTAGAAACATTCGCTTCTTT+AGG 0.283849 3_4:+24957247 Msa0495510:CDS
TGGGCTAGATCTTGATTTAT+TGG 0.288153 3_4:+24960743 Msa0495510:CDS
GGGCTAGATCTTGATTTATT+GGG 0.315434 3_4:+24960744 Msa0495510:CDS
AGTAGCCATGGTTATGGTTA+TGG 0.316692 3_4:-24956773 None:intergenic
ATACTGTCAGGATCAGCTTC+TGG 0.321460 3_4:-24957033 None:intergenic
GAGGTAAATAATAATGAATT+TGG 0.328333 3_4:-24962096 None:intergenic
TGTTGCTATTTGTGATGAAT+TGG 0.332766 3_4:+24957212 Msa0495510:CDS
CAAATGATGCTTATATTTAA+GGG 0.347994 3_4:-24962028 None:intergenic
TTTCTGAAACAGAACATGTT+TGG 0.375644 3_4:-24956930 None:intergenic
GTCGCAAAAGGATTGTCTAA+TGG 0.378728 3_4:-24960323 None:intergenic
ATGCTAGAGGAAAGAAACTT+TGG 0.380045 3_4:+24957097 Msa0495510:CDS
TCTCGTGCTAAAATATTATC+AGG 0.382198 3_4:+24960816 Msa0495510:CDS
TAAAATTGAACTTATATTCA+AGG 0.382289 3_4:-24962068 None:intergenic
TCAGAGGAAAGATTTGGATA+TGG 0.386627 3_4:+24960717 Msa0495510:CDS
GAAGCAGCTAAGAAAGCTTC+TGG 0.387670 3_4:+24961782 Msa0495510:CDS
AATAATTTGTACAATTATAC+AGG 0.388555 3_4:-24961890 None:intergenic
TTTCCTCTAGCATCAAGAAT+TGG 0.395207 3_4:-24957087 None:intergenic
TAAGAGCTCTTCCCAGTAAA+CGG 0.396897 3_4:+24958840 Msa0495510:CDS
TTAGATTCTGAGGATTGTAT+TGG 0.404887 3_4:+24961836 Msa0495510:CDS
GGAGAGTTTGGTAGTGATGA+TGG 0.412162 3_4:-24956848 None:intergenic
TCAGCCTCAGAGGAAAGATT+TGG 0.414247 3_4:+24960711 Msa0495510:CDS
CTTTGTGTGTAACTGATTTG+TGG 0.415730 3_4:-24956745 None:intergenic
GAAGATGCAACAGCCAATCC+TGG 0.417168 3_4:-24960795 None:intergenic
GCTTAGAGTAGCCATGGTTA+TGG 0.422554 3_4:-24956779 None:intergenic
AGATAACATGTTTCAGCAGT+TGG 0.424045 3_4:-24957006 None:intergenic
TACTGTCAGGATCAGCTTCT+GGG 0.430219 3_4:-24957032 None:intergenic
AAAGATTTGGATATGGTTCT+GGG 0.430953 3_4:+24960724 Msa0495510:CDS
GAAACATCCTGGATTTCAAA+AGG 0.431524 3_4:+24960283 Msa0495510:CDS
CCTCAGAATCTAACTCATCT+TGG 0.433316 3_4:-24961826 None:intergenic
AACTAAAGAAGCTGAAGCTT+GGG 0.435084 3_4:+24961760 Msa0495510:CDS
TTTGTGTGTAACTGATTTGT+GGG 0.435175 3_4:-24956744 None:intergenic
GATAACATGTTTCAGCAGTT+GGG 0.444982 3_4:-24957005 None:intergenic
ATGTTTGGAGTTTAAGGAAG+TGG 0.452226 3_4:-24956915 None:intergenic
AATTATTACAAAAGCATGTA+AGG 0.453031 3_4:+24958808 Msa0495510:CDS
GCGTGCAGTGTCCGTTTCAA+TGG 0.453511 3_4:-24961666 None:intergenic
TACAAAAGCATGTAAGGAGC+TGG 0.453660 3_4:+24958814 Msa0495510:CDS
CTAATGACTTTACCTGAGTA+AGG 0.456324 3_4:-24960395 None:intergenic
TCTAGCATCAAGAATTGGTC+TGG 0.461218 3_4:-24957082 None:intergenic
CAACTAAAGAAGCTGAAGCT+TGG 0.463491 3_4:+24961759 Msa0495510:CDS
ATCCTGACAGTATATTAAGC+TGG 0.466941 3_4:+24957043 Msa0495510:CDS
GTCTAATGGCAAAAGAGGCT+TGG 0.468563 3_4:-24960309 None:intergenic
GAGAGTTTGGTAGTGATGAT+GGG 0.470702 3_4:-24956847 None:intergenic
CTAACTCATCTTGGATTGCT+AGG 0.473543 3_4:-24961817 None:intergenic
TGCTAGAGGAAAGAAACTTT+GGG 0.479591 3_4:+24957098 Msa0495510:CDS
AAGAGCTCTTCCCAGTAAAC+GGG 0.480174 3_4:+24958841 Msa0495510:CDS
CTACAAAACTTAGTAACCTT+AGG 0.488762 3_4:-24961974 None:intergenic
AACAGCCAATCCTGGGATCA+AGG 0.490579 3_4:-24960787 None:intergenic
TCCCAGCTTAATATACTGTC+AGG 0.490831 3_4:-24957045 None:intergenic
AAATCTTTCCTCTGAGGCTG+AGG 0.496486 3_4:-24960709 None:intergenic
GGAGCTCTGTTCCATTGAAA+CGG 0.498099 3_4:+24961655 Msa0495510:CDS
TACAATTATACAGGTGGAGG+TGG 0.500673 3_4:-24961881 None:intergenic
AAATTCCAACTGAAAGAGTC+AGG 0.502775 3_4:-24961694 None:intergenic
CAGTATATTAAGCTGGGAGT+TGG 0.503857 3_4:+24957050 Msa0495510:CDS
ATCATACTCACCCGTTTACT+GGG 0.505577 3_4:-24958851 None:intergenic
TTTGTTCAGTTACCTTACTC+AGG 0.508695 3_4:+24960383 Msa0495510:CDS
GGGTTGGTGTAGTTGAAAGA+TGG 0.516225 3_4:-24956826 None:intergenic
AGCTTCAGCTTCTTTAGTTG+AGG 0.517831 3_4:-24961756 None:intergenic
ACTGTATACACGAAACATCC+TGG 0.520597 3_4:+24960272 Msa0495510:CDS
GGTTGGTGTAGTTGAAAGAT+GGG 0.527581 3_4:-24956825 None:intergenic
GAAGACCTTGATCCCAGGAT+TGG 0.531133 3_4:+24960782 Msa0495510:CDS
AGACCAATTCTTGATGCTAG+AGG 0.536152 3_4:+24957084 Msa0495510:CDS
GGAAAATGGGAAATTGATGA+TGG 0.538473 3_4:-24956881 None:intergenic
TTGTACAATTATACAGGTGG+AGG 0.539597 3_4:-24961884 None:intergenic
AAGCGAATGTTTCTAGGCAC+AGG 0.539819 3_4:-24957240 None:intergenic
GGATTGTCTAATGGCAAAAG+AGG 0.539986 3_4:-24960314 None:intergenic
TCCTGACAGTATATTAAGCT+GGG 0.544833 3_4:+24957044 Msa0495510:CDS
CCAAGATGAGTTAGATTCTG+AGG 0.545325 3_4:+24961826 Msa0495510:CDS
TATTATAGCCGTTCGAGAGG+AGG 0.550876 3_4:+24960686 Msa0495510:intron
ATGCTTATATTTAAGGGCAG+AGG 0.551354 3_4:-24962022 None:intergenic
TTTGGTAGTGATGATGGGGT+TGG 0.556833 3_4:-24956842 None:intergenic
AAACATCCTGGATTTCAAAA+GGG 0.557929 3_4:+24960284 Msa0495510:CDS
GACGAGAAGACCTTGATCCC+AGG 0.562521 3_4:+24960777 Msa0495510:CDS
TCAGCTTCTTTAGTTGAGGT+AGG 0.564251 3_4:-24961752 None:intergenic
TATTAATAGTATCACTCTCA+AGG 0.566789 3_4:+24957182 Msa0495510:CDS
GTGTAACTGATTTGTGGGTG+AGG 0.567920 3_4:-24956739 None:intergenic
GTTGAAGCTTAGAGTAGCCA+TGG 0.581076 3_4:-24956785 None:intergenic
CTTTATTATAGCCGTTCGAG+AGG 0.585820 3_4:+24960683 Msa0495510:intron
AAGATGCAACAGCCAATCCT+GGG 0.585967 3_4:-24960794 None:intergenic
ACAAAAGCATGTAAGGAGCT+GGG 0.589228 3_4:+24958815 Msa0495510:CDS
GGCTGAGGCCTCCTCTCGAA+CGG 0.600823 3_4:-24960694 None:intergenic
GTTGGTGTAGTTGAAAGATG+GGG 0.608423 3_4:-24956824 None:intergenic
AGAGGAGGCCTCAGCCTCAG+AGG 0.611276 3_4:+24960701 Msa0495510:CDS
TTTCAGTTGGAATTTCGACT+CGG 0.613028 3_4:+24961702 Msa0495510:CDS
AGAGTTTGGTAGTGATGATG+GGG 0.613874 3_4:-24956846 None:intergenic
AATTTGTACAATTATACAGG+TGG 0.621554 3_4:-24961887 None:intergenic
TCTAACCTGACTCTTTCAGT+TGG 0.624714 3_4:+24961689 Msa0495510:CDS
CACATCCATAACCATAACCA+TGG 0.635493 3_4:+24956768 Msa0495510:exon
ATATCCAAATCTTTCCTCTG+AGG 0.661900 3_4:-24960715 None:intergenic
GCAGCTAAGAAAGCTTCTGG+AGG 0.687768 3_4:+24961785 Msa0495510:CDS

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! ATACTATTAATAACATTATT+AGG - chr3_4:24957174-24957193 None:intergenic 10.0%
!!! CTAATTATTTTTATATACTT+TGG - chr3_4:24958049-24958068 None:intergenic 10.0%
!! ATATATGTTAGAGATTAAAT+TGG + chr3_4:24958228-24958247 Msa0495510:intron 15.0%
!! ATAAAAAGAAAAAAAAAGGT+TGG + chr3_4:24959314-24959333 Msa0495510:intron 15.0%
!!! TTAACAACTATTTTTTGTTT+TGG + chr3_4:24959481-24959500 Msa0495510:intron 15.0%
!! TAAAATGAAAAAAGAAACAA+GGG - chr3_4:24959751-24959770 None:intergenic 15.0%
!! TTAAAATGAAAAAAGAAACA+AGG - chr3_4:24959752-24959771 None:intergenic 15.0%
!!! TAAAAGTCATTTTTAAAACA+AGG - chr3_4:24961014-24961033 None:intergenic 15.0%
!!! AATAATTTGTACAATTATAC+AGG - chr3_4:24961893-24961912 None:intergenic 15.0%
!! TAAAATTGAACTTATATTCA+AGG - chr3_4:24962071-24962090 None:intergenic 15.0%
!! TGAATTATGAAATGTTCATA+AGG + chr3_4:24957399-24957418 Msa0495510:intron 20.0%
!!! TACTTTGGGAATTAAATTAA+GGG - chr3_4:24958034-24958053 None:intergenic 20.0%
!!! ATACTTTGGGAATTAAATTA+AGG - chr3_4:24958035-24958054 None:intergenic 20.0%
!!! GTTTGTAGCATTTTTTTTTA+GGG - chr3_4:24958131-24958150 None:intergenic 20.0%
!!! AGTTTGTAGCATTTTTTTTT+AGG - chr3_4:24958132-24958151 None:intergenic 20.0%
!!! ATGAGTTTTCATATACTTTA+GGG + chr3_4:24958158-24958177 Msa0495510:intron 20.0%
!! ACTATATCTTGTGTATTTAT+TGG + chr3_4:24958332-24958351 Msa0495510:intron 20.0%
!! ACACTTTATAAACTCTATTT+AGG - chr3_4:24958394-24958413 None:intergenic 20.0%
!!! TCAAAAAAATCTGAAACTAA+TGG + chr3_4:24958560-24958579 Msa0495510:intron 20.0%
!!! CAAAAAAATCTGAAACTAAT+GGG + chr3_4:24958561-24958580 Msa0495510:intron 20.0%
!!! AATTATTACAAAAGCATGTA+AGG + chr3_4:24958808-24958827 Msa0495510:CDS 20.0%
!! AAATGTTCTTAGAAAGTAAA+TGG - chr3_4:24959053-24959072 None:intergenic 20.0%
!! TAAAGTGATTAAACTGAATA+TGG - chr3_4:24959287-24959306 None:intergenic 20.0%
!! AAAAATAGTTGTTAAGAGTT+TGG - chr3_4:24959476-24959495 None:intergenic 20.0%
!! AAAATGAAAAAAGAAACAAG+GGG - chr3_4:24959750-24959769 None:intergenic 20.0%
!!! AATTATTGATTTCAACAAGA+TGG - chr3_4:24959842-24959861 None:intergenic 20.0%
!! AAAATGTATGATAGCATAAT+AGG - chr3_4:24961135-24961154 None:intergenic 20.0%
!! ACAAATTATAAACATGTCAT+AGG - chr3_4:24961405-24961424 None:intergenic 20.0%
!! TAATTAAGCACTTATGTATA+AGG - chr3_4:24961515-24961534 None:intergenic 20.0%
!! CAAATGATGCTTATATTTAA+GGG - chr3_4:24962031-24962050 None:intergenic 20.0%
!! TCAAATGATGCTTATATTTA+AGG - chr3_4:24962032-24962051 None:intergenic 20.0%
! TATTAATAGTATCACTCTCA+AGG + chr3_4:24957182-24957201 Msa0495510:CDS 25.0%
! ACTACTTATTGTTTACGTTA+CGG + chr3_4:24957286-24957305 Msa0495510:intron 25.0%
! TTCGATAAACTGATTAACTA+TGG + chr3_4:24957437-24957456 Msa0495510:intron 25.0%
!! ATAAGTATTGTCAAACTGTT+TGG + chr3_4:24957498-24957517 Msa0495510:intron 25.0%
!! TAAGTATTGTCAAACTGTTT+GGG + chr3_4:24957499-24957518 Msa0495510:intron 25.0%
! ATTTCTTTCATAAACTGTCT+TGG - chr3_4:24957669-24957688 None:intergenic 25.0%
! TGTGATTCTCTGTAATATTA+AGG - chr3_4:24957832-24957851 None:intergenic 25.0%
! ATAAAAAAACCATTATGCCA+TGG + chr3_4:24957905-24957924 Msa0495510:intron 25.0%
! AGAATAAGTAACTACTTGTA+GGG - chr3_4:24957963-24957982 None:intergenic 25.0%
!!! CTTTTTGTTAGCTTTTACAT+TGG + chr3_4:24957991-24958010 Msa0495510:intron 25.0%
!! GATGAGTTTTCATATACTTT+AGG + chr3_4:24958157-24958176 Msa0495510:intron 25.0%
!!! AACGACTTCATATATTTTAG+CGG + chr3_4:24958190-24958209 Msa0495510:intron 25.0%
!!! TAGATTTTAGCAAAACTGAT+TGG - chr3_4:24958434-24958453 None:intergenic 25.0%
!!! CTTTATTTTCTCTGCATTTA+GGG + chr3_4:24958502-24958521 Msa0495510:intron 25.0%
! TGTTACATATTGTTAGTGTA+AGG + chr3_4:24958736-24958755 Msa0495510:intron 25.0%
! GCAAACTAATCCATTTATAT+CGG - chr3_4:24958939-24958958 None:intergenic 25.0%
!!! ATATAAATGGATTAGTTTGC+TGG + chr3_4:24958939-24958958 Msa0495510:intron 25.0%
!! TAAACTGAATATGGATTTTC+AGG - chr3_4:24959278-24959297 None:intergenic 25.0%
! AAAAGAAAAAAAAAGGTTGG+AGG + chr3_4:24959317-24959336 Msa0495510:intron 25.0%
! AAAGAAAAAAAAAGGTTGGA+GGG + chr3_4:24959318-24959337 Msa0495510:intron 25.0%
! TAATAATAAAGCTAACACAC+TGG + chr3_4:24959536-24959555 Msa0495510:intron 25.0%
!!! TTTTGGCTTGTTCAAAAAAA+AGG + chr3_4:24959638-24959657 Msa0495510:intron 25.0%
! AAATGAAAAAAGAAACAAGG+GGG - chr3_4:24959749-24959768 None:intergenic 25.0%
!!! ATATGGATCTTCTTTGTTTT+GGG - chr3_4:24959814-24959833 None:intergenic 25.0%
!!! AATATGGATCTTCTTTGTTT+TGG - chr3_4:24959815-24959834 None:intergenic 25.0%
! TAATGTTTCATCCAAGATAT+TGG + chr3_4:24959891-24959910 Msa0495510:intron 25.0%
!!! TGTTGGTTTTTATATGACTT+CGG + chr3_4:24959933-24959952 Msa0495510:intron 25.0%
!! ATAAAACACTGTGAATCTTT+TGG + chr3_4:24960144-24960163 Msa0495510:intron 25.0%
!! ACATGGTTTTTCATGTATTT+AGG + chr3_4:24960448-24960467 Msa0495510:intron 25.0%
!! CATGGTTTTTCATGTATTTA+GGG + chr3_4:24960449-24960468 Msa0495510:intron 25.0%
! ATCATTTATTATGCTTACAC+TGG + chr3_4:24960507-24960526 Msa0495510:intron 25.0%
! ATAAATGTTGACAAAAAAGC+TGG + chr3_4:24961250-24961269 Msa0495510:intron 25.0%
! TTTGTCTACAAATTCTATTC+AGG - chr3_4:24961284-24961303 None:intergenic 25.0%
! TAACTTATGCATAAACACTT+CGG + chr3_4:24961357-24961376 Msa0495510:intron 25.0%
! TAAGGTAATTCTACAATCAA+AGG - chr3_4:24961497-24961516 None:intergenic 25.0%
! AATTTGTACAATTATACAGG+TGG - chr3_4:24961890-24961909 None:intergenic 25.0%
!! TTTGTGTGTAACTGATTTGT+GGG - chr3_4:24956747-24956766 None:intergenic 30.0%
!!! ATTGATGATGGATTTTGAAG+AGG - chr3_4:24956872-24956891 None:intergenic 30.0%
! TTTAAGGAAGTGGTTTTTGT+TGG - chr3_4:24956908-24956927 None:intergenic 30.0%
!! TTTCTGAAACAGAACATGTT+TGG - chr3_4:24956933-24956952 None:intergenic 30.0%
!! TGTTGCTATTTGTGATGAAT+TGG + chr3_4:24957212-24957231 Msa0495510:CDS 30.0%
TCAAATAAGTCAATCCAAAC+AGG - chr3_4:24957320-24957339 None:intergenic 30.0%
TTCTCCAAGACAGTTTAAAA+GGG + chr3_4:24957583-24957602 Msa0495510:intron 30.0%
!! GGGTTTGAAATAAAGTTTTG+CGG - chr3_4:24957943-24957962 None:intergenic 30.0%
CAGAATAAGTAACTACTTGT+AGG - chr3_4:24957964-24957983 None:intergenic 30.0%
CAAGTAGTTACTTATTCTGT+TGG + chr3_4:24957965-24957984 Msa0495510:intron 30.0%
!!! TTGTTAGCTTTTACATTGGT+AGG + chr3_4:24957995-24958014 Msa0495510:intron 30.0%
!!! TGTTAGCTTTTACATTGGTA+GGG + chr3_4:24957996-24958015 Msa0495510:intron 30.0%
CCTAAATGCAGAGAAAATAA+AGG - chr3_4:24958504-24958523 None:intergenic 30.0%
!!! CCTTTATTTTCTCTGCATTT+AGG + chr3_4:24958501-24958520 Msa0495510:intron 30.0%
! GCCTTTTCATAAGAAACTAA+GGG - chr3_4:24958587-24958606 None:intergenic 30.0%
! TGCCTTTTCATAAGAAACTA+AGG - chr3_4:24958588-24958607 None:intergenic 30.0%
CATGTAAGTCATGTTATGTT+TGG - chr3_4:24958718-24958737 None:intergenic 30.0%
! GCAATGAAATTTTGAATCCA+CGG - chr3_4:24958888-24958907 None:intergenic 30.0%
TAATTGGCAATAAAACCAAG+TGG + chr3_4:24958983-24959002 Msa0495510:intron 30.0%
! AATTTTACTTTGCATGTGAG+TGG + chr3_4:24959088-24959107 Msa0495510:intron 30.0%
AAGAAAAAAAAAGGTTGGAG+GGG + chr3_4:24959319-24959338 Msa0495510:intron 30.0%
GTAGATATTTGATTGTGATG+TGG + chr3_4:24959341-24959360 Msa0495510:intron 30.0%
GTTGTTCACAAATTTCTACA+GGG - chr3_4:24959370-24959389 None:intergenic 30.0%
CTGTAGAAATTTGTGAACAA+CGG + chr3_4:24959369-24959388 Msa0495510:intron 30.0%
AAATTTGTGAACAACGGAAA+GGG + chr3_4:24959375-24959394 Msa0495510:intron 30.0%
! AGTTAGAGCATCCAAAAATT+TGG + chr3_4:24959716-24959735 Msa0495510:intron 30.0%
AATGAAAAAAGAAACAAGGG+GGG - chr3_4:24959748-24959767 None:intergenic 30.0%
!!! TATGGATCTTCTTTGTTTTG+GGG - chr3_4:24959813-24959832 None:intergenic 30.0%
TTTGTCAGAAAATGTACTTC+TGG - chr3_4:24959997-24960016 None:intergenic 30.0%
!! GTGTAGGTTTTTAGAAATGT+GGG + chr3_4:24960048-24960067 Msa0495510:intron 30.0%
!! TGTAGGTTTTTAGAAATGTG+GGG + chr3_4:24960049-24960068 Msa0495510:intron 30.0%
AACATTTAAAAGCTGATGTC+AGG - chr3_4:24960092-24960111 None:intergenic 30.0%
GAAGCGTATAAAATATACAC+CGG - chr3_4:24960197-24960216 None:intergenic 30.0%
!! AGTGCTTGTCATTACTTTTA+TGG + chr3_4:24960231-24960250 Msa0495510:intron 30.0%
!! GTCATTACTTTTATGGTTAG+AGG + chr3_4:24960238-24960257 Msa0495510:CDS 30.0%
AAACATCCTGGATTTCAAAA+GGG + chr3_4:24960284-24960303 Msa0495510:CDS 30.0%
! AAACTTCCAGAAGATCTTTT+TGG + chr3_4:24960347-24960366 Msa0495510:CDS 30.0%
!! AAGATCTTTTTGGTGAAAGA+TGG + chr3_4:24960357-24960376 Msa0495510:CDS 30.0%
!! AGATCTTTTTGGTGAAAGAT+GGG + chr3_4:24960358-24960377 Msa0495510:CDS 30.0%
! TCTTTAAGAATTGCATGACA+TGG + chr3_4:24960431-24960450 Msa0495510:intron 30.0%
!!! ATTCCTCTTGTTTTAGTACA+AGG + chr3_4:24960598-24960617 Msa0495510:intron 30.0%
TCTCGTGCTAAAATATTATC+AGG + chr3_4:24960816-24960835 Msa0495510:CDS 30.0%
GTTAAGAAATATGCATACTC+CGG - chr3_4:24961341-24961360 None:intergenic 30.0%
TCAAACACATTGTTGATATG+TGG + chr3_4:24961545-24961564 Msa0495510:intron 30.0%
ATAAAAGCTGTGACAGTAAA+TGG - chr3_4:24961626-24961645 None:intergenic 30.0%
! TTAGATTCTGAGGATTGTAT+TGG + chr3_4:24961836-24961855 Msa0495510:CDS 30.0%
! GATTTCAGAAGTTTTACCTA+AGG + chr3_4:24961958-24961977 Msa0495510:three_prime_UTR 30.0%
CTACAAAACTTAGTAACCTT+AGG - chr3_4:24961977-24961996 None:intergenic 30.0%
!! CTTTGTGTGTAACTGATTTG+TGG - chr3_4:24956748-24956767 None:intergenic 35.0%
GGAAAATGGGAAATTGATGA+TGG - chr3_4:24956884-24956903 None:intergenic 35.0%
! GGTTTTTGTTGGAGGAAAAT+GGG - chr3_4:24956897-24956916 None:intergenic 35.0%
! TGGTTTTTGTTGGAGGAAAA+TGG - chr3_4:24956898-24956917 None:intergenic 35.0%
! ATGTTTGGAGTTTAAGGAAG+TGG - chr3_4:24956918-24956937 None:intergenic 35.0%
! CAGAACATGTTTGGAGTTTA+AGG - chr3_4:24956924-24956943 None:intergenic 35.0%
GATAACATGTTTCAGCAGTT+GGG - chr3_4:24957008-24957027 None:intergenic 35.0%
AGATAACATGTTTCAGCAGT+TGG - chr3_4:24957009-24957028 None:intergenic 35.0%
ATCCTGACAGTATATTAAGC+TGG + chr3_4:24957043-24957062 Msa0495510:CDS 35.0%
TCCTGACAGTATATTAAGCT+GGG + chr3_4:24957044-24957063 Msa0495510:CDS 35.0%
TTTCCTCTAGCATCAAGAAT+TGG - chr3_4:24957090-24957109 None:intergenic 35.0%
ATGCTAGAGGAAAGAAACTT+TGG + chr3_4:24957097-24957116 Msa0495510:CDS 35.0%
TGCTAGAGGAAAGAAACTTT+GGG + chr3_4:24957098-24957117 Msa0495510:CDS 35.0%
CTAAAGAAGCGAATGTTTCT+AGG - chr3_4:24957249-24957268 None:intergenic 35.0%
CTAGAAACATTCGCTTCTTT+AGG + chr3_4:24957247-24957266 Msa0495510:CDS 35.0%
TGATTAACTATGGACCTGTT+TGG + chr3_4:24957447-24957466 Msa0495510:intron 35.0%
GTTCTCCAAGACAGTTTAAA+AGG + chr3_4:24957582-24957601 Msa0495510:intron 35.0%
CATAAACTGTCTTGGAGAAA+TGG - chr3_4:24957661-24957680 None:intergenic 35.0%
GCTATTGTTTACTTACTCAC+TGG + chr3_4:24957777-24957796 Msa0495510:intron 35.0%
!!! GTGGTTTTAAATAGTGGTTG+CGG + chr3_4:24957805-24957824 Msa0495510:intron 35.0%
TAGAGTGACAATTACATGCA+TGG + chr3_4:24958268-24958287 Msa0495510:intron 35.0%
ATAGTTGAGTAGATGACGTA+TGG - chr3_4:24958317-24958336 None:intergenic 35.0%
TTTAGCAAAACTGATTGGCA+AGG - chr3_4:24958429-24958448 None:intergenic 35.0%
GCCCTTAGTTTCTTATGAAA+AGG + chr3_4:24958583-24958602 Msa0495510:intron 35.0%
!! TGGTGTCTTTAAGACATGTT+GGG + chr3_4:24958618-24958637 Msa0495510:intron 35.0%
CTAATCCATTTATATCGGCA+AGG - chr3_4:24958934-24958953 None:intergenic 35.0%
! TGACAATCTGAGACACTAAT+TGG + chr3_4:24958967-24958986 Msa0495510:intron 35.0%
! TAAGCTTTTGATCCAAGGTT+TGG - chr3_4:24959025-24959044 None:intergenic 35.0%
AAACCTTGGATCAAAAGCTT+AGG + chr3_4:24959024-24959043 Msa0495510:intron 35.0%
AACCTTGGATCAAAAGCTTA+GGG + chr3_4:24959025-24959044 Msa0495510:intron 35.0%
GCTAGAGTGACATTTAGTTA+TGG + chr3_4:24959110-24959129 Msa0495510:intron 35.0%
CGTTGTTCACAAATTTCTAC+AGG - chr3_4:24959371-24959390 None:intergenic 35.0%
GAAATTTGTGAACAACGGAA+AGG + chr3_4:24959374-24959393 Msa0495510:intron 35.0%
AATTTGTGAACAACGGAAAG+GGG + chr3_4:24959376-24959395 Msa0495510:intron 35.0%
!! TAGGTCGATGTTAGTTTGTT+TGG + chr3_4:24959433-24959452 Msa0495510:intron 35.0%
!! CGATGTTAGTTTGTTTGGAT+TGG + chr3_4:24959438-24959457 Msa0495510:intron 35.0%
! GAGGTCTGCAATTTCAATTT+TGG + chr3_4:24959621-24959640 Msa0495510:intron 35.0%
! GGGGGAATAAACCAAATTTT+TGG - chr3_4:24959730-24959749 None:intergenic 35.0%
!!! ATGGATCTTCTTTGTTTTGG+GGG - chr3_4:24959812-24959831 None:intergenic 35.0%
TCAACAAGATGGAGCAAATA+TGG - chr3_4:24959831-24959850 None:intergenic 35.0%
GAGTATGCTTTCCAATATCT+TGG - chr3_4:24959905-24959924 None:intergenic 35.0%
TCTAAAAACCTACACGTTTC+TGG - chr3_4:24960043-24960062 None:intergenic 35.0%
!! CGTGTAGGTTTTTAGAAATG+TGG + chr3_4:24960047-24960066 Msa0495510:intron 35.0%
!! GTAGGTTTTTAGAAATGTGG+GGG + chr3_4:24960050-24960069 Msa0495510:intron 35.0%
!! TTTTTAGAAATGTGGGGGAT+TGG + chr3_4:24960055-24960074 Msa0495510:intron 35.0%
!! TTTTAGAAATGTGGGGGATT+GGG + chr3_4:24960056-24960075 Msa0495510:intron 35.0%
TTTAAAAGCTGATGTCAGGA+AGG - chr3_4:24960088-24960107 None:intergenic 35.0%
!! AGTAATGACAAGCACTGAAA+AGG - chr3_4:24960227-24960246 None:intergenic 35.0%
GAAACATCCTGGATTTCAAA+AGG + chr3_4:24960283-24960302 Msa0495510:CDS 35.0%
CTTTCACCAAAAAGATCTTC+TGG - chr3_4:24960356-24960375 None:intergenic 35.0%
TTTGTTCAGTTACCTTACTC+AGG + chr3_4:24960383-24960402 Msa0495510:CDS 35.0%
CTAATGACTTTACCTGAGTA+AGG - chr3_4:24960398-24960417 None:intergenic 35.0%
! TGGGCTAGATCTTGATTTAT+TGG + chr3_4:24960743-24960762 Msa0495510:CDS 35.0%
GGGCTAGATCTTGATTTATT+GGG + chr3_4:24960744-24960763 Msa0495510:CDS 35.0%
!! ATTGATCAAAGAGAAGTGCT+AGG - chr3_4:24961201-24961220 None:intergenic 35.0%
CTACAATCAAAGGAGGAATT+TGG - chr3_4:24961487-24961506 None:intergenic 35.0%
GGTAATTCTACAATCAAAGG+AGG - chr3_4:24961494-24961513 None:intergenic 35.0%
! ACTGTCACAGCTTTTATGAA+TGG + chr3_4:24961629-24961648 Msa0495510:intron 35.0%
! CACAGCTTTTATGAATGGAT+TGG + chr3_4:24961634-24961653 Msa0495510:intron 35.0%
AAATTCCAACTGAAAGAGTC+AGG - chr3_4:24961697-24961716 None:intergenic 35.0%
TTTCAGTTGGAATTTCGACT+CGG + chr3_4:24961702-24961721 Msa0495510:CDS 35.0%
! TGAGGTAGGACTTTTCTTAT+AGG - chr3_4:24961741-24961760 None:intergenic 35.0%
AACTAAAGAAGCTGAAGCTT+GGG + chr3_4:24961760-24961779 Msa0495510:CDS 35.0%
TTGTACAATTATACAGGTGG+AGG - chr3_4:24961887-24961906 None:intergenic 35.0%
ATGCTTATATTTAAGGGCAG+AGG - chr3_4:24962025-24962044 None:intergenic 35.0%
CACATCCATAACCATAACCA+TGG + chr3_4:24956768-24956787 Msa0495510:exon 40.0%
AGTAGCCATGGTTATGGTTA+TGG - chr3_4:24956776-24956795 None:intergenic 40.0%
!!! AGATGGGGTTTTGATTCTTG+TGG - chr3_4:24956812-24956831 None:intergenic 40.0%
GTTGGTGTAGTTGAAAGATG+GGG - chr3_4:24956827-24956846 None:intergenic 40.0%
! GGTTGGTGTAGTTGAAAGAT+GGG - chr3_4:24956828-24956847 None:intergenic 40.0%
!! AGAGTTTGGTAGTGATGATG+GGG - chr3_4:24956849-24956868 None:intergenic 40.0%
!! GAGAGTTTGGTAGTGATGAT+GGG - chr3_4:24956850-24956869 None:intergenic 40.0%
!! GGATTTTGAAGAGGAGAGTT+TGG - chr3_4:24956863-24956882 None:intergenic 40.0%
! AAGGAAGTGGTTTTTGTTGG+AGG - chr3_4:24956905-24956924 None:intergenic 40.0%
TCCCAGCTTAATATACTGTC+AGG - chr3_4:24957048-24957067 None:intergenic 40.0%
CAGTATATTAAGCTGGGAGT+TGG + chr3_4:24957050-24957069 Msa0495510:CDS 40.0%
TCTAGCATCAAGAATTGGTC+TGG - chr3_4:24957085-24957104 None:intergenic 40.0%
AGACCAATTCTTGATGCTAG+AGG + chr3_4:24957084-24957103 Msa0495510:CDS 40.0%
!! TTACGGTGTTACTAGCTGTT+TGG + chr3_4:24957303-24957322 Msa0495510:intron 40.0%
! GTTGCCCTTTTAAACTGTCT+TGG - chr3_4:24957590-24957609 None:intergenic 40.0%
!!! GCAGTCGTGGTTTTAAATAG+TGG + chr3_4:24957799-24957818 Msa0495510:intron 40.0%
AAATCTAGGCCATGGCATAA+TGG - chr3_4:24957917-24957936 None:intergenic 40.0%
! TTATGCCATGGCCTAGATTT+TGG + chr3_4:24957917-24957936 Msa0495510:intron 40.0%
! AAGTTTTGCGGCCAAAATCT+AGG - chr3_4:24957931-24957950 None:intergenic 40.0%
TCTGTAGCATCTCAACAACA+AGG - chr3_4:24958104-24958123 None:intergenic 40.0%
! TGAAAAGGCATGTTCATGTG+TGG + chr3_4:24958598-24958617 Msa0495510:intron 40.0%
!! GTGGTGTCTTTAAGACATGT+TGG + chr3_4:24958617-24958636 Msa0495510:intron 40.0%
AGACATGTTGGGATTTCACA+TGG + chr3_4:24958629-24958648 Msa0495510:intron 40.0%
GACATGTTGGGATTTCACAT+GGG + chr3_4:24958630-24958649 Msa0495510:intron 40.0%
! TACAAAAGCATGTAAGGAGC+TGG + chr3_4:24958814-24958833 Msa0495510:CDS 40.0%
! ACAAAAGCATGTAAGGAGCT+GGG + chr3_4:24958815-24958834 Msa0495510:CDS 40.0%
TAAGAGCTCTTCCCAGTAAA+CGG + chr3_4:24958840-24958859 Msa0495510:CDS 40.0%
ATCATACTCACCCGTTTACT+GGG - chr3_4:24958854-24958873 None:intergenic 40.0%
AATCATACTCACCCGTTTAC+TGG - chr3_4:24958855-24958874 None:intergenic 40.0%
TATGATTTCTGATTCTGCCG+TGG + chr3_4:24958868-24958887 Msa0495510:intron 40.0%
TGCTCAGCAGAAAGCTATAT+AGG + chr3_4:24958905-24958924 Msa0495510:intron 40.0%
GGTTTCCTTGCCGATATAAA+TGG + chr3_4:24958926-24958945 Msa0495510:intron 40.0%
ACCTTGGATCAAAAGCTTAG+GGG + chr3_4:24959026-24959045 Msa0495510:intron 40.0%
ATTTGTGAACAACGGAAAGG+GGG + chr3_4:24959377-24959396 Msa0495510:intron 40.0%
!! TAGTTTGTTTGGATTGGCGT+CGG + chr3_4:24959444-24959463 Msa0495510:intron 40.0%
! TTTTCGTGACTGCTGTATTG+TGG + chr3_4:24959585-24959604 Msa0495510:intron 40.0%
CTGCAATTTCAAAGACTGTC+TGG + chr3_4:24959662-24959681 Msa0495510:intron 40.0%
CAACACTTTGTAGTTAGCAC+CGG - chr3_4:24959692-24959711 None:intergenic 40.0%
AGCATACTCATCTAGACTGT+TGG + chr3_4:24959916-24959935 Msa0495510:intron 40.0%
TGACTTCGGATGTACACATT+CGG + chr3_4:24959947-24959966 Msa0495510:intron 40.0%
TTTAGAAATGTGGGGGATTG+GGG + chr3_4:24960057-24960076 Msa0495510:intron 40.0%
! TGACTCTACTTCCTTTTCAG+AGG + chr3_4:24960167-24960186 Msa0495510:intron 40.0%
ACTGTATACACGAAACATCC+TGG + chr3_4:24960272-24960291 Msa0495510:CDS 40.0%
!!! TTGGATCCCTTTTGAAATCC+AGG - chr3_4:24960293-24960312 None:intergenic 40.0%
GGATTGTCTAATGGCAAAAG+AGG - chr3_4:24960317-24960336 None:intergenic 40.0%
GTCGCAAAAGGATTGTCTAA+TGG - chr3_4:24960326-24960345 None:intergenic 40.0%
!! TCTGGAAGTTTTGTCGCAAA+AGG - chr3_4:24960338-24960357 None:intergenic 40.0%
! CAGCCTTGTACTAAAACAAG+AGG - chr3_4:24960604-24960623 None:intergenic 40.0%
CTCTCGAACGGCTATAATAA+AGG - chr3_4:24960685-24960704 None:intergenic 40.0%
CTTTATTATAGCCGTTCGAG+AGG + chr3_4:24960683-24960702 Msa0495510:intron 40.0%
TAAGCAGTGAGACAAGAGTT+TGG + chr3_4:24961310-24961329 Msa0495510:intron 40.0%
TCTAACCTGACTCTTTCAGT+TGG + chr3_4:24961689-24961708 Msa0495510:CDS 40.0%
TCAGCTTCTTTAGTTGAGGT+AGG - chr3_4:24961755-24961774 None:intergenic 40.0%
AGCTTCAGCTTCTTTAGTTG+AGG - chr3_4:24961759-24961778 None:intergenic 40.0%
CAACTAAAGAAGCTGAAGCT+TGG + chr3_4:24961759-24961778 Msa0495510:CDS 40.0%
CTAACTCATCTTGGATTGCT+AGG - chr3_4:24961820-24961839 None:intergenic 40.0%
CCTCAGAATCTAACTCATCT+TGG - chr3_4:24961829-24961848 None:intergenic 40.0%
CCAAGATGAGTTAGATTCTG+AGG + chr3_4:24961826-24961845 Msa0495510:CDS 40.0%
TACAATTATACAGGTGGAGG+TGG - chr3_4:24961884-24961903 None:intergenic 40.0%
TTAAGGGCAGAGGTAGTAAA+AGG - chr3_4:24962015-24962034 None:intergenic 40.0%
!! GTGTAACTGATTTGTGGGTG+AGG - chr3_4:24956742-24956761 None:intergenic 45.0%
GCTTAGAGTAGCCATGGTTA+TGG - chr3_4:24956782-24956801 None:intergenic 45.0%
GTTGAAGCTTAGAGTAGCCA+TGG - chr3_4:24956788-24956807 None:intergenic 45.0%
!! GGGTTGGTGTAGTTGAAAGA+TGG - chr3_4:24956829-24956848 None:intergenic 45.0%
!! TTTGGTAGTGATGATGGGGT+TGG - chr3_4:24956845-24956864 None:intergenic 45.0%
!! GGAGAGTTTGGTAGTGATGA+TGG - chr3_4:24956851-24956870 None:intergenic 45.0%
TACTGTCAGGATCAGCTTCT+GGG - chr3_4:24957035-24957054 None:intergenic 45.0%
ATACTGTCAGGATCAGCTTC+TGG - chr3_4:24957036-24957055 None:intergenic 45.0%
!! AAGCGAATGTTTCTAGGCAC+AGG - chr3_4:24957243-24957262 None:intergenic 45.0%
GACAGTTTAAAAGGGCAACC+CGG + chr3_4:24957591-24957610 Msa0495510:intron 45.0%
AACCACGATTGAGGCTTCAT+CGG - chr3_4:24957866-24957885 None:intergenic 45.0%
TGGTACTAAGTCCTCACCAT+AGG + chr3_4:24958288-24958307 Msa0495510:intron 45.0%
AGATGACGTATGGTGTCCTA+TGG - chr3_4:24958307-24958326 None:intergenic 45.0%
!! TCCCGTGTTGATTAGTGATG+TGG + chr3_4:24958368-24958387 Msa0495510:intron 45.0%
GCCACATCACTAATCAACAC+GGG - chr3_4:24958372-24958391 None:intergenic 45.0%
GGCCACATCACTAATCAACA+CGG - chr3_4:24958373-24958392 None:intergenic 45.0%
AAGAGCTCTTCCCAGTAAAC+GGG + chr3_4:24958841-24958860 Msa0495510:CDS 45.0%
ATGCACGTTACAAGACCACT+TGG - chr3_4:24959001-24959020 None:intergenic 45.0%
! ACCCCTAAGCTTTTGATCCA+AGG - chr3_4:24959030-24959049 None:intergenic 45.0%
AGTTGCATTGCAGCTGTTGT+AGG + chr3_4:24959414-24959433 Msa0495510:intron 45.0%
!!! GTTTTGGCGTTGACATGCTA+TGG + chr3_4:24959497-24959516 Msa0495510:intron 45.0%
TTGTGGCTGATCACATTACG+AGG + chr3_4:24959602-24959621 Msa0495510:intron 45.0%
TCAAAGACTGTCTGGTAGAC+CGG + chr3_4:24959670-24959689 Msa0495510:intron 45.0%
! CGGTGCTAACTACAAAGTGT+TGG + chr3_4:24959690-24959709 Msa0495510:intron 45.0%
GTACACTTCCAGAAACGTGT+AGG + chr3_4:24960032-24960051 Msa0495510:intron 45.0%
GTCTAATGGCAAAAGAGGCT+TGG - chr3_4:24960312-24960331 None:intergenic 45.0%
TATTATAGCCGTTCGAGAGG+AGG + chr3_4:24960686-24960705 Msa0495510:intron 45.0%
!! AAATCTTTCCTCTGAGGCTG+AGG - chr3_4:24960712-24960731 None:intergenic 45.0%
AAGATGCAACAGCCAATCCT+GGG - chr3_4:24960797-24960816 None:intergenic 45.0%
CACTCTCTCTAACACTCTAG+TGG - chr3_4:24961162-24961181 None:intergenic 45.0%
!! AGACAAGAGTTTGGTCTTGC+CGG + chr3_4:24961319-24961338 Msa0495510:intron 45.0%
GCTGTGACAGTAAATGGTGA+GGG - chr3_4:24961620-24961639 None:intergenic 45.0%
AGCTGTGACAGTAAATGGTG+AGG - chr3_4:24961621-24961640 None:intergenic 45.0%
GGAGCTCTGTTCCATTGAAA+CGG + chr3_4:24961655-24961674 Msa0495510:CDS 45.0%
GAAGCAGCTAAGAAAGCTTC+TGG + chr3_4:24961782-24961801 Msa0495510:CDS 45.0%
!! CTGAGGATTGTATTGGCTTC+TGG + chr3_4:24961843-24961862 Msa0495510:CDS 45.0%
!!! TAATTATTTTTATATACTTT+GGG - chr3_4:24958048-24958067 None:intergenic 5.0%
!! ATTTATAAAAAGAAAAAAAA+AGG + chr3_4:24959310-24959329 Msa0495510:intron 5.0%
ACTAAAGCTCCCGCATATGC+AGG + chr3_4:24957617-24957636 Msa0495510:intron 50.0%
CTAAAGCTCCCGCATATGCA+GGG + chr3_4:24957618-24957637 Msa0495510:intron 50.0%
TACTTACTCACTGGCAGTCG+TGG + chr3_4:24957786-24957805 Msa0495510:intron 50.0%
ACCACGATTGAGGCTTCATC+GGG - chr3_4:24957865-24957884 None:intergenic 50.0%
ACGTATGGTGTCCTATGGTG+AGG - chr3_4:24958302-24958321 None:intergenic 50.0%
GTAACGTGCATGCCAAACCT+TGG + chr3_4:24959010-24959029 Msa0495510:intron 50.0%
!! CTTCCTTTTCAGAGGTGCAC+CGG + chr3_4:24960175-24960194 Msa0495510:intron 50.0%
GAAGACCTTGATCCCAGGAT+TGG + chr3_4:24960782-24960801 Msa0495510:CDS 50.0%
AACAGCCAATCCTGGGATCA+AGG - chr3_4:24960790-24960809 None:intergenic 50.0%
GAAGATGCAACAGCCAATCC+TGG - chr3_4:24960798-24960817 None:intergenic 50.0%
GCAGCTAAGAAAGCTTCTGG+AGG + chr3_4:24961785-24961804 Msa0495510:CDS 50.0%
! ATGCGGGAGCTTTAGTGCAC+CGG - chr3_4:24957613-24957632 None:intergenic 55.0%
TTCCCGAACCCTGCATATGC+GGG - chr3_4:24957629-24957648 None:intergenic 55.0%
CTTCCCGAACCCTGCATATG+CGG - chr3_4:24957630-24957649 None:intergenic 55.0%
GCATATGCAGGGTTCGGGAA+GGG + chr3_4:24957629-24957648 Msa0495510:intron 55.0%
CATATGCAGGGTTCGGGAAG+GGG + chr3_4:24957630-24957649 Msa0495510:intron 55.0%
CTGCAACGCAACCACGATTG+AGG - chr3_4:24957875-24957894 None:intergenic 55.0%
TGCGGCCAAAATCTAGGCCA+TGG - chr3_4:24957925-24957944 None:intergenic 55.0%
GTGTATGTCTGCTGCGTTGC+AGG + chr3_4:24958771-24958790 Msa0495510:intron 55.0%
GAAATGTGGGGGATTGGGGA+AGG + chr3_4:24960061-24960080 Msa0495510:intron 55.0%
! ACACCGGTGCACCTCTGAAA+AGG - chr3_4:24960181-24960200 None:intergenic 55.0%
GACGAGAAGACCTTGATCCC+AGG + chr3_4:24960777-24960796 Msa0495510:CDS 55.0%
GCGTGCAGTGTCCGTTTCAA+TGG - chr3_4:24961669-24961688 None:intergenic 55.0%
! TGCGGGAGCTTTAGTGCACC+GGG - chr3_4:24957612-24957631 None:intergenic 60.0%
GCTCCCGCATATGCAGGGTT+CGG + chr3_4:24957623-24957642 Msa0495510:intron 60.0%
CTCCCGCATATGCAGGGTTC+GGG + chr3_4:24957624-24957643 Msa0495510:intron 60.0%
CGCATATGCAGGGTTCGGGA+AGG + chr3_4:24957628-24957647 Msa0495510:intron 60.0%
GCCCGATGAAGCCTCAATCG+TGG + chr3_4:24957861-24957880 Msa0495510:intron 60.0%
GGCTGAGGCCTCCTCTCGAA+CGG - chr3_4:24960697-24960716 None:intergenic 65.0%
AGAGGAGGCCTCAGCCTCAG+AGG + chr3_4:24960701-24960720 Msa0495510:CDS 65.0%
Chromosome Type Strat End Strand Name
chr3_4 gene 24956733 24962103 24956733 ID=Msa0495510;Name=Msa0495510
chr3_4 mRNA 24956733 24962103 24956733 ID=Msa0495510-mRNA-1;Parent=Msa0495510;Name=Msa0495510-mRNA-1;_AED=0.24;_eAED=0.24;_QI=54|1|1|1|1|1|5|205|375
chr3_4 exon 24956733 24957268 24956733 ID=Msa0495510-mRNA-1:exon:5985;Parent=Msa0495510-mRNA-1
chr3_4 exon 24958793 24958862 24958793 ID=Msa0495510-mRNA-1:exon:5986;Parent=Msa0495510-mRNA-1
chr3_4 exon 24960233 24960404 24960233 ID=Msa0495510-mRNA-1:exon:5987;Parent=Msa0495510-mRNA-1
chr3_4 exon 24960694 24960837 24960694 ID=Msa0495510-mRNA-1:exon:5988;Parent=Msa0495510-mRNA-1
chr3_4 exon 24961639 24962103 24961639 ID=Msa0495510-mRNA-1:exon:5989;Parent=Msa0495510-mRNA-1
chr3_4 five_prime_UTR 24956733 24956786 24956733 ID=Msa0495510-mRNA-1:five_prime_utr;Parent=Msa0495510-mRNA-1
chr3_4 CDS 24956787 24957268 24956787 ID=Msa0495510-mRNA-1:cds;Parent=Msa0495510-mRNA-1
chr3_4 CDS 24958793 24958862 24958793 ID=Msa0495510-mRNA-1:cds;Parent=Msa0495510-mRNA-1
chr3_4 CDS 24960233 24960404 24960233 ID=Msa0495510-mRNA-1:cds;Parent=Msa0495510-mRNA-1
chr3_4 CDS 24960694 24960837 24960694 ID=Msa0495510-mRNA-1:cds;Parent=Msa0495510-mRNA-1
chr3_4 CDS 24961639 24961898 24961639 ID=Msa0495510-mRNA-1:cds;Parent=Msa0495510-mRNA-1
chr3_4 three_prime_UTR 24961899 24962103 24961899 ID=Msa0495510-mRNA-1:three_prime_utr;Parent=Msa0495510-mRNA-1
Gene Sequence

>Msa0495510

ATGGCTACTCTAAGCTTCAACTCCACAAGAATCAAAACCCCATCTTTCAACTACACCAACCCCATCATCACTACCAAACTCTCCTCTTCAAAATCCATCATCAATTTCCCATTTTCCTCCAACAAAAACCACTTCCTTAAACTCCAAACATGTTCTGTTTCAGAAACAACAGCAACAACAACACAGAAAGACATTGAAGAAGAAGAAGAGAAAGAAGACCCAACTGCTGAAACATGTTATCTTGACCCAGAAGCTGATCCTGACAGTATATTAAGCTGGGAGTTGGATTTTTGTTCCAGACCAATTCTTGATGCTAGAGGAAAGAAACTTTGGGAGCTTGTTGTTTGTGATAAATCTCTTTCACTTCAATATACTAAGTATTTTCCTAATAATGTTATTAATAGTATCACTCTCAAGGATTCTATTGTTGCTATTTGTGATGAATTGGATTTACCTGTGCCTAGAAACATTCGCTTCTTTAGGTCACAGATGCAAACAATTATTACAAAAGCATGTAAGGAGCTGGGCATAAGAGCTCTTCCCAGTAAACGGTGCTTGTCATTACTTTTATGGTTAGAGGAACGCTATGAGACTGTATACACGAAACATCCTGGATTTCAAAAGGGATCCAAGCCTCTTTTGCCATTAGACAATCCTTTTGCGACAAAACTTCCAGAAGATCTTTTTGGTGAAAGATGGGCTTTTGTTCAGTTACCTTACTCAGCCGTTCGAGAGGAGGCCTCAGCCTCAGAGGAAAGATTTGGATATGGTTCTGGGCTAGATCTTGATTTATTGGGTATTGAAATCGACGAGAAGACCTTGATCCCAGGATTGGCTGTTGCATCTTCTCGTGCTAAAATATTATCAGCTTTTATGAATGGATTGGAGCTCTGTTCCATTGAAACGGACACTGCACGCTCTAACCTGACTCTTTCAGTTGGAATTTCGACTCGGTATGTATATGCGACCTATAAGAAAAGTCCTACCTCAACTAAAGAAGCTGAAGCTTGGGAAGCAGCTAAGAAAGCTTCTGGAGGTTTGCATTTCCTAGCAATCCAAGATGAGTTAGATTCTGAGGATTGTATTGGCTTCTGGCTTTTGCTAGACTTGCCACCTCCACCTGTATAA

Protein sequence

>Msa0495510

MATLSFNSTRIKTPSFNYTNPIITTKLSSSKSIINFPFSSNKNHFLKLQTCSVSETTATTTQKDIEEEEEKEDPTAETCYLDPEADPDSILSWELDFCSRPILDARGKKLWELVVCDKSLSLQYTKYFPNNVINSITLKDSIVAICDELDLPVPRNIRFFRSQMQTIITKACKELGIRALPSKRCLSLLLWLEERYETVYTKHPGFQKGSKPLLPLDNPFATKLPEDLFGERWAFVQLPYSAVREEASASEERFGYGSGLDLDLLGIEIDEKTLIPGLAVASSRAKILSAFMNGLELCSIETDTARSNLTLSVGISTRYVYATYKKSPTSTKEAEAWEAAKKASGGLHFLAIQDELDSEDCIGFWLLLDLPPPPV*