AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar zhongmu-4 / Msa1134560


Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa1134560 MtrunA17_Chr7g0214801 83.039 283 15 4 1 255 1 278 2.68e-146 418
Msa1134560 MtrunA17_Chr7g0214801 75.510 49 12 0 241 289 358 406 3.59e-15 75.5
Msa1134560 MtrunA17_Chr1g0195051 40.824 267 114 8 22 254 2 258 4.13e-52 177
Msa1134560 MtrunA17_Chr7g0272261 42.017 238 104 6 56 259 15 252 7.76e-48 166
Msa1134560 MtrunA17_Chr3g0145661 40.444 225 96 6 71 259 19 241 8.73e-47 162
Msa1134560 MtrunA17_Chr1g0180411 36.396 283 136 10 8 256 6 278 2.00e-44 157
Msa1134560 MtrunA17_Chr7g0264851 36.402 239 111 7 28 256 17 224 1.77e-39 144
Msa1134560 MtrunA17_Chr7g0264831 51.562 128 55 3 37 158 22 148 3.62e-34 124
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa1134560 AT5G47900.3 45.745 282 94 7 4 256 8 259 2.65e-74 229
Msa1134560 AT5G47900.5 44.912 285 95 7 4 256 8 262 2.21e-73 227
Msa1134560 AT5G47900.2 43.377 302 107 8 1 268 5 276 1.80e-71 224
Msa1134560 AT5G47900.8 43.813 299 104 8 4 268 8 276 2.93e-71 225
Msa1134560 AT5G47900.7 43.813 299 104 8 4 268 8 276 9.34e-71 225
Msa1134560 AT5G47900.4 43.813 299 104 8 4 268 2 270 9.97e-71 225
Msa1134560 AT5G47900.9 43.813 299 104 8 4 268 8 276 1.69e-70 224
Msa1134560 AT5G47900.1 43.813 299 104 8 4 268 8 276 1.69e-70 224
Msa1134560 AT5G47900.10 49.505 202 70 4 86 255 1 202 5.29e-59 193
Msa1134560 AT5G27730.4 42.742 248 96 5 54 255 5 252 8.07e-53 176
Msa1134560 AT5G27730.3 42.742 248 96 5 54 255 5 252 1.90e-52 176
Msa1134560 AT5G27730.1 42.742 248 96 5 54 255 5 252 1.16e-51 176
Msa1134560 AT5G47900.6 50.476 105 43 2 160 255 57 161 1.19e-27 109
Msa1134560 AT5G27730.5 35.583 163 73 4 125 255 9 171 6.83e-18 82.4
Msa1134560 AT5G27730.2 35.583 163 73 4 125 255 9 171 1.25e-17 82.8
Msa1134560 AT5G47900.11 51.471 68 29 1 192 255 10 77 8.56e-17 78.6

Find 71 sgRNAs with CRISPR-Local

Find 742 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
CTTCTTCTCTTACTGTTTCT+TGG 0.131629 7_4:-1084833 None:intergenic
TTACAGCTCTCTGTGAAATT+TGG 0.205026 7_4:+1089599 Msa1134560:CDS
TTTCTATATATAAAAGTAAA+AGG 0.235676 7_4:-1092312 None:intergenic
ATGATGCATATGATATATTT+TGG 0.259041 7_4:+1092265 Msa1134560:three_prime_UTR
TTGTCACAGCTAAAGTTAAT+TGG 0.267789 7_4:+1092027 Msa1134560:intron
GCTGCTGGCATTCTCTTTGC+TGG 0.289082 7_4:+1091243 Msa1134560:CDS
CGTGAAGATATCGTTAATTC+TGG 0.293626 7_4:+1089628 Msa1134560:CDS
TGAAGAGAATGATGAAGATT+TGG 0.304060 7_4:+1085132 Msa1134560:CDS
ATTTATCTTTGCTTGCTGTA+TGG 0.319433 7_4:+1089921 Msa1134560:CDS
CTCAATGCAGCTTATGATAT+TGG 0.322014 7_4:+1088509 Msa1134560:intron
ATATGATGACTGCCATATAT+TGG 0.326954 7_4:+1092362 Msa1134560:three_prime_UTR
GCGCTTAAGCTTCTTGCATT+AGG 0.338601 7_4:+1088887 Msa1134560:CDS
CTTTGCTGGAATATATTTGA+TGG 0.349023 7_4:+1091257 Msa1134560:CDS
GAATGATGAAGATTTGGAAA+TGG 0.359702 7_4:+1085138 Msa1134560:CDS
GATACAAATTACCCAATATA+TGG 0.365163 7_4:-1092374 None:intergenic
TGTCTCACTGCTGGTGCTGC+TGG 0.374086 7_4:+1091228 Msa1134560:CDS
GGAGAAGTTACATTTCTTCA+TGG 0.376788 7_4:+1092286 Msa1134560:three_prime_UTR
AATGATGAAGATTTGGAAAT+GGG 0.378578 7_4:+1085139 Msa1134560:CDS
TTTATCTTTGCTTGCTGTAT+GGG 0.383070 7_4:+1089922 Msa1134560:CDS
GATATCGATACTTTCTCAAA+AGG 0.392446 7_4:-1089657 None:intergenic
CTTGAAGAAACAATGCAATA+TGG 0.399784 7_4:-1084936 None:intergenic
TATGATGACTGCCATATATT+GGG 0.412376 7_4:+1092363 Msa1134560:three_prime_UTR
ACACTCACAGAAAATTTCAT+AGG 0.413861 7_4:-1089996 None:intergenic
CAGCTAAAGTTAATTGGAGT+TGG 0.414698 7_4:+1092033 Msa1134560:intron
CAATGCAATATGGTAGGGTT+AGG 0.428226 7_4:-1084926 None:intergenic
TAATCTTTGTAGCTGAATCA+TGG 0.430117 7_4:-1085183 None:intergenic
GATCATTCCAACGACATTGC+AGG 0.438809 7_4:-1090170 None:intergenic
GAGTGGATTTGAAGCAGATA+AGG 0.447061 7_4:+1089339 Msa1134560:intron
ATGATCGATCGTAGCTTGTT+GGG 0.449187 7_4:+1090187 Msa1134560:CDS
TGAGGAGGACCAAGCATTGT+TGG 0.449722 7_4:+1092146 Msa1134560:three_prime_UTR
TAAATGTATATAGCAGTAGA+TGG 0.451022 7_4:+1085048 Msa1134560:intron
TGGGATGTACGTTCCCGATT+GGG 0.453793 7_4:+1089941 Msa1134560:CDS
AGTTATACTTGTCTCACTGC+TGG 0.456351 7_4:+1091219 Msa1134560:CDS
AATGATCGATCGTAGCTTGT+TGG 0.458059 7_4:+1090186 Msa1134560:CDS
AATTTCATAGGTTCTGAAGA+AGG 0.469705 7_4:-1089984 None:intergenic
GTCGCATCAACTTTGCAAGA+TGG 0.475648 7_4:-1088845 None:intergenic
ATGATATTGGTGGATGATGC+TGG 0.492588 7_4:+1088522 Msa1134560:CDS
AAGAAACAATGCAATATGGT+AGG 0.494291 7_4:-1084932 None:intergenic
ATATCGATACTTTCTCAAAA+GGG 0.495414 7_4:-1089656 None:intergenic
GTTTCACCTATGTCTTAATG+AGG 0.495589 7_4:+1092128 Msa1134560:three_prime_UTR
ATGGGATGTACGTTCCCGAT+TGG 0.499827 7_4:+1089940 Msa1134560:CDS
GGTTCTGAAGAAGGTTCTGT+TGG 0.504371 7_4:-1089975 None:intergenic
AGCAATCGTTGAGAAGTTTG+AGG 0.505791 7_4:-1085298 None:intergenic
TGGAACTTCATACTCCCAAT+CGG 0.507436 7_4:-1089955 None:intergenic
CAAAGTTGATGCGACTAGAA+AGG 0.510229 7_4:+1088853 Msa1134560:CDS
GCTATTGTTAAACCATTCCA+TGG 0.518565 7_4:-1088573 None:intergenic
CTCAATCATTCTCCATGGAA+TGG 0.518820 7_4:+1088561 Msa1134560:CDS
TGCACTAGCATTCACATACA+AGG 0.532824 7_4:+1088635 Msa1134560:CDS
AAAATTCCACCAACAATGCT+TGG 0.533541 7_4:-1092155 None:intergenic
CATGGAGAATGATTGAGTGC+TGG 0.551745 7_4:-1088555 None:intergenic
GGACCAGCCTGCAATGTCGT+TGG 0.555369 7_4:+1090163 Msa1134560:CDS
TATTGATAAAATCACCTACA+TGG 0.559841 7_4:+1092242 Msa1134560:three_prime_UTR
GGTCCTCCTCATTAAGACAT+AGG 0.560439 7_4:-1092134 None:intergenic
TGTGGAGTAAGAGGCGACAC+TGG 0.561390 7_4:+1090142 Msa1134560:CDS
TTGGAGTTGGATCATGAAGG+AGG 0.565228 7_4:+1092046 Msa1134560:exon
TAGGTTAAATGTGGAGTAAG+AGG 0.567721 7_4:+1090133 Msa1134560:intron
GGAACTTCATACTCCCAATC+GGG 0.571048 7_4:-1089954 None:intergenic
AGAAACAATGCAATATGGTA+GGG 0.578188 7_4:-1084931 None:intergenic
GGAGGACCAAGCATTGTTGG+TGG 0.586335 7_4:+1092149 Msa1134560:three_prime_UTR
CAGCACTCAATCATTCTCCA+TGG 0.586892 7_4:+1088556 Msa1134560:CDS
ATCATATGCATCATCCATGT+AGG 0.591704 7_4:-1092256 None:intergenic
GGAGGAAGCAAATATGCTAG+TGG 0.593975 7_4:+1092064 Msa1134560:three_prime_UTR
AATGCAGCTTATGATATTGG+TGG 0.594795 7_4:+1088512 Msa1134560:intron
ATTCCAACGACATTGCAGGC+TGG 0.596770 7_4:-1090166 None:intergenic
ATGTATATAGCAGTAGATGG+TGG 0.605666 7_4:+1085051 Msa1134560:intron
TCACCTATGTCTTAATGAGG+AGG 0.606864 7_4:+1092131 Msa1134560:three_prime_UTR
TAATTGGAGTTGGATCATGA+AGG 0.613374 7_4:+1092043 Msa1134560:CDS
AACATGTGTTAGGTTAAATG+TGG 0.637640 7_4:+1090124 Msa1134560:intron
TCATTGGATGCAGAGAATTG+CGG 0.648931 7_4:+1089564 Msa1134560:intron
AGTTGATGCGACTAGAAAGG+CGG 0.689224 7_4:+1088856 Msa1134560:CDS
ATATTGGTGGATGATGCTGG+TGG 0.716550 7_4:+1088525 Msa1134560:CDS

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! ATTATTATCACTAAAAAATT+TGG - chr7_4:1085570-1085589 None:intergenic 10.0%
!! GAAAATATTAAAAAATATAG+AGG - chr7_4:1086327-1086346 None:intergenic 10.0%
!! AAAATTATAAAACAAGAAAT+AGG - chr7_4:1086637-1086656 None:intergenic 10.0%
!!! AAAATAGAACAATATTTTTT+TGG - chr7_4:1086739-1086758 None:intergenic 10.0%
!! TTTATTATATGATGATAAAA+AGG + chr7_4:1087213-1087232 Msa1134560:intron 10.0%
!! ATATGATAATATTACATATT+TGG - chr7_4:1087449-1087468 None:intergenic 10.0%
!!! AATATATTTTTATTTTTGGT+AGG + chr7_4:1087498-1087517 Msa1134560:intron 10.0%
!!! TTATTTTTTTTGAATATAAC+AGG + chr7_4:1089874-1089893 Msa1134560:intron 10.0%
!!! TATTTTTTTTGAATATAACA+GGG + chr7_4:1089875-1089894 Msa1134560:intron 10.0%
!! TTTCTATATATAAAAGTAAA+AGG - chr7_4:1092315-1092334 None:intergenic 10.0%
!! ATTATTATCACTAAAAAATT+TGG - chr7_4:1085570-1085589 None:intergenic 10.0%
!! GAAAATATTAAAAAATATAG+AGG - chr7_4:1086327-1086346 None:intergenic 10.0%
!! AAAATTATAAAACAAGAAAT+AGG - chr7_4:1086637-1086656 None:intergenic 10.0%
!!! AAAATAGAACAATATTTTTT+TGG - chr7_4:1086739-1086758 None:intergenic 10.0%
!! TTTATTATATGATGATAAAA+AGG + chr7_4:1087213-1087232 Msa1134560:intron 10.0%
!! ATATGATAATATTACATATT+TGG - chr7_4:1087449-1087468 None:intergenic 10.0%
!!! AATATATTTTTATTTTTGGT+AGG + chr7_4:1087498-1087517 Msa1134560:intron 10.0%
!!! TTATTTTTTTTGAATATAAC+AGG + chr7_4:1089874-1089893 Msa1134560:intron 10.0%
!!! TATTTTTTTTGAATATAACA+GGG + chr7_4:1089875-1089894 Msa1134560:intron 10.0%
!! TTTCTATATATAAAAGTAAA+AGG - chr7_4:1092315-1092334 None:intergenic 10.0%
!!! TATTTAGTTGATTTTGTTTT+AGG + chr7_4:1085418-1085437 Msa1134560:intron 15.0%
!! TTAGTGATGATTAATAAAAT+GGG + chr7_4:1085872-1085891 Msa1134560:intron 15.0%
!! AACCAAAAAATGTTATTAAT+TGG + chr7_4:1086249-1086268 Msa1134560:intron 15.0%
!!! TTCCAATTAATAACATTTTT+TGG - chr7_4:1086254-1086273 None:intergenic 15.0%
!!! ATATTGTGAAATTTTTTCAA+TGG - chr7_4:1086524-1086543 None:intergenic 15.0%
!! TAAGGAAACATATTTATTAT+TGG - chr7_4:1086668-1086687 None:intergenic 15.0%
!!! TTTTTCTGAAAAATTACTAA+GGG - chr7_4:1086811-1086830 None:intergenic 15.0%
!!! TTTTTTCTGAAAAATTACTA+AGG - chr7_4:1086812-1086831 None:intergenic 15.0%
!!! TCATTTTCTAAAATTATTAC+TGG + chr7_4:1087581-1087600 Msa1134560:intron 15.0%
!! GGTAAAGTTTATTTAATAAA+TGG + chr7_4:1088166-1088185 Msa1134560:intron 15.0%
!!! TCATTCTTTATTTATTTCAT+TGG + chr7_4:1089548-1089567 Msa1134560:intron 15.0%
!!! GAATTTTAGTTTCTTAATAT+AGG + chr7_4:1089704-1089723 Msa1134560:intron 15.0%
!!! CAATTTAACTTCTTATATAT+TGG + chr7_4:1090073-1090092 Msa1134560:intron 15.0%
!! ATTATAACTGTAAATTCAAA+AGG - chr7_4:1090391-1090410 None:intergenic 15.0%
!! TTTGAATTTACAGTTATAAT+TGG + chr7_4:1090391-1090410 Msa1134560:intron 15.0%
!! TAATAAAAAACCAAAATGTT+GGG - chr7_4:1090822-1090841 None:intergenic 15.0%
!! TATCTTGAAGAATTTATTTA+CGG - chr7_4:1091390-1091409 None:intergenic 15.0%
!!! TTTTATCTTTGTTATAGAAA+TGG + chr7_4:1091462-1091481 Msa1134560:intron 15.0%
!!! TATTTAGTTGATTTTGTTTT+AGG + chr7_4:1085418-1085437 Msa1134560:intron 15.0%
!! TTAGTGATGATTAATAAAAT+GGG + chr7_4:1085872-1085891 Msa1134560:intron 15.0%
!! AACCAAAAAATGTTATTAAT+TGG + chr7_4:1086249-1086268 Msa1134560:intron 15.0%
!!! TTCCAATTAATAACATTTTT+TGG - chr7_4:1086254-1086273 None:intergenic 15.0%
!!! ATATTGTGAAATTTTTTCAA+TGG - chr7_4:1086524-1086543 None:intergenic 15.0%
!! TAAGGAAACATATTTATTAT+TGG - chr7_4:1086668-1086687 None:intergenic 15.0%
!!! TTTTTCTGAAAAATTACTAA+GGG - chr7_4:1086811-1086830 None:intergenic 15.0%
!!! TTTTTTCTGAAAAATTACTA+AGG - chr7_4:1086812-1086831 None:intergenic 15.0%
!!! TCATTTTCTAAAATTATTAC+TGG + chr7_4:1087581-1087600 Msa1134560:intron 15.0%
!! GGTAAAGTTTATTTAATAAA+TGG + chr7_4:1088166-1088185 Msa1134560:intron 15.0%
!!! TCATTCTTTATTTATTTCAT+TGG + chr7_4:1089548-1089567 Msa1134560:intron 15.0%
!!! GAATTTTAGTTTCTTAATAT+AGG + chr7_4:1089704-1089723 Msa1134560:intron 15.0%
!!! CAATTTAACTTCTTATATAT+TGG + chr7_4:1090073-1090092 Msa1134560:intron 15.0%
!! ATTATAACTGTAAATTCAAA+AGG - chr7_4:1090391-1090410 None:intergenic 15.0%
!! TTTGAATTTACAGTTATAAT+TGG + chr7_4:1090391-1090410 Msa1134560:intron 15.0%
!! TAATAAAAAACCAAAATGTT+GGG - chr7_4:1090822-1090841 None:intergenic 15.0%
!! TATCTTGAAGAATTTATTTA+CGG - chr7_4:1091390-1091409 None:intergenic 15.0%
!!! TTTTATCTTTGTTATAGAAA+TGG + chr7_4:1091462-1091481 Msa1134560:intron 15.0%
!! AACTAAAAAGAAGCAAAATA+AGG - chr7_4:1085376-1085395 None:intergenic 20.0%
!! TTATAGTTATTGGGTTTATT+AGG + chr7_4:1085792-1085811 Msa1134560:intron 20.0%
!!! TAGTTATTGCTAAATTTTGA+TGG + chr7_4:1085849-1085868 Msa1134560:intron 20.0%
!! GTTAGTGATGATTAATAAAA+TGG + chr7_4:1085871-1085890 Msa1134560:intron 20.0%
!! TAGTGATGATTAATAAAATG+GGG + chr7_4:1085873-1085892 Msa1134560:intron 20.0%
!! TTCTTGAGATTTAATAGATT+TGG + chr7_4:1085933-1085952 Msa1134560:intron 20.0%
!! ATAACAATTTGATCAAAAAG+AGG - chr7_4:1086179-1086198 None:intergenic 20.0%
!!! TATTTTTGCTCAATGATAAT+GGG + chr7_4:1086370-1086389 Msa1134560:intron 20.0%
!! GAATTGTTAAACAAAAACTA+AGG - chr7_4:1086686-1086705 None:intergenic 20.0%
!! AAAATTATACAACAAAAACC+AGG - chr7_4:1086708-1086727 None:intergenic 20.0%
!!! CGTATAACTAGATATTTTTT+AGG + chr7_4:1086936-1086955 Msa1134560:intron 20.0%
!!! CACTAGACATTTTTTTTATA+TGG + chr7_4:1087064-1087083 Msa1134560:intron 20.0%
!! TAAAAATACCTAATCTTGAT+GGG - chr7_4:1087112-1087131 None:intergenic 20.0%
!! TTAAAAATACCTAATCTTGA+TGG - chr7_4:1087113-1087132 None:intergenic 20.0%
!!! CATTTACAATAGTTTTTTGT+AGG - chr7_4:1087160-1087179 None:intergenic 20.0%
!! CTACAAAAAACTATTGTAAA+TGG + chr7_4:1087158-1087177 Msa1134560:intron 20.0%
!!! AAAACTATTGTAAATGGATT+AGG + chr7_4:1087164-1087183 Msa1134560:intron 20.0%
!! CATACATCATTATCAAAAAA+AGG + chr7_4:1087257-1087276 Msa1134560:intron 20.0%
!! ATAGTAAAATGATATCATGA+AGG - chr7_4:1087412-1087431 None:intergenic 20.0%
!! ATTGGAAAATATAACATGAT+TGG - chr7_4:1087884-1087903 None:intergenic 20.0%
!!! ATCATGTTATATTTTCCAAT+TGG + chr7_4:1087884-1087903 Msa1134560:intron 20.0%
!! AAATATCAGTTAATTCCAAT+TGG - chr7_4:1087902-1087921 None:intergenic 20.0%
!!! TATTTGTCTTGTTTAAACTT+TGG + chr7_4:1087957-1087976 Msa1134560:intron 20.0%
!! GTAATTGAATTGAATGTAAT+AGG + chr7_4:1088191-1088210 Msa1134560:intron 20.0%
!! ATTTCATTTATTATTTGCCT+AGG - chr7_4:1088377-1088396 None:intergenic 20.0%
!! TAACTTATGATACTAATTGA+TGG + chr7_4:1088411-1088430 Msa1134560:intron 20.0%
!! AACTTATGATACTAATTGAT+GGG + chr7_4:1088412-1088431 Msa1134560:intron 20.0%
!! CCAACAATAAAAAGAAAAAA+CGG - chr7_4:1088612-1088631 None:intergenic 20.0%
!! ATATAGATCAAAGAATTCAA+AGG - chr7_4:1088727-1088746 None:intergenic 20.0%
!! TATCACAAAATTTAAGCAAA+AGG - chr7_4:1088939-1088958 None:intergenic 20.0%
!! ATGAATTTAAACTTCCAAAT+AGG - chr7_4:1090044-1090063 None:intergenic 20.0%
!! TCATTGAAATTTATATAGCA+TGG + chr7_4:1090667-1090686 Msa1134560:intron 20.0%
!! AATTTATATAGCATGGTTTA+TGG + chr7_4:1090674-1090693 Msa1134560:intron 20.0%
!! GTAATAAAAAACCAAAATGT+TGG - chr7_4:1090823-1090842 None:intergenic 20.0%
!!! GGTTTTTTATTACTTTCTTT+AGG + chr7_4:1090830-1090849 Msa1134560:intron 20.0%
!!! CAATGTTTTAAAAATTGAAC+CGG - chr7_4:1091899-1091918 None:intergenic 20.0%
!!! AATCATGATTTTCTATTATG+AGG + chr7_4:1091959-1091978 Msa1134560:intron 20.0%
!!! TGATTTTATCAATAGATTAG+AGG - chr7_4:1092236-1092255 None:intergenic 20.0%
!!! ATGATGCATATGATATATTT+TGG + chr7_4:1092265-1092284 Msa1134560:three_prime_UTR 20.0%
!! AACTAAAAAGAAGCAAAATA+AGG - chr7_4:1085376-1085395 None:intergenic 20.0%
!! TTATAGTTATTGGGTTTATT+AGG + chr7_4:1085792-1085811 Msa1134560:intron 20.0%
!!! TAGTTATTGCTAAATTTTGA+TGG + chr7_4:1085849-1085868 Msa1134560:intron 20.0%
!! GTTAGTGATGATTAATAAAA+TGG + chr7_4:1085871-1085890 Msa1134560:intron 20.0%
!! TAGTGATGATTAATAAAATG+GGG + chr7_4:1085873-1085892 Msa1134560:intron 20.0%
!! TTCTTGAGATTTAATAGATT+TGG + chr7_4:1085933-1085952 Msa1134560:intron 20.0%
!! ATAACAATTTGATCAAAAAG+AGG - chr7_4:1086179-1086198 None:intergenic 20.0%
!!! TATTTTTGCTCAATGATAAT+GGG + chr7_4:1086370-1086389 Msa1134560:intron 20.0%
!! GAATTGTTAAACAAAAACTA+AGG - chr7_4:1086686-1086705 None:intergenic 20.0%
!! AAAATTATACAACAAAAACC+AGG - chr7_4:1086708-1086727 None:intergenic 20.0%
!!! CGTATAACTAGATATTTTTT+AGG + chr7_4:1086936-1086955 Msa1134560:intron 20.0%
!!! CACTAGACATTTTTTTTATA+TGG + chr7_4:1087064-1087083 Msa1134560:intron 20.0%
!! TAAAAATACCTAATCTTGAT+GGG - chr7_4:1087112-1087131 None:intergenic 20.0%
!! TTAAAAATACCTAATCTTGA+TGG - chr7_4:1087113-1087132 None:intergenic 20.0%
!!! CATTTACAATAGTTTTTTGT+AGG - chr7_4:1087160-1087179 None:intergenic 20.0%
!! CTACAAAAAACTATTGTAAA+TGG + chr7_4:1087158-1087177 Msa1134560:intron 20.0%
!!! AAAACTATTGTAAATGGATT+AGG + chr7_4:1087164-1087183 Msa1134560:intron 20.0%
!! CATACATCATTATCAAAAAA+AGG + chr7_4:1087257-1087276 Msa1134560:intron 20.0%
!! ATAGTAAAATGATATCATGA+AGG - chr7_4:1087412-1087431 None:intergenic 20.0%
!! ATTGGAAAATATAACATGAT+TGG - chr7_4:1087884-1087903 None:intergenic 20.0%
!!! ATCATGTTATATTTTCCAAT+TGG + chr7_4:1087884-1087903 Msa1134560:intron 20.0%
!! AAATATCAGTTAATTCCAAT+TGG - chr7_4:1087902-1087921 None:intergenic 20.0%
!!! TATTTGTCTTGTTTAAACTT+TGG + chr7_4:1087957-1087976 Msa1134560:intron 20.0%
!! GTAATTGAATTGAATGTAAT+AGG + chr7_4:1088191-1088210 Msa1134560:intron 20.0%
!! ATTTCATTTATTATTTGCCT+AGG - chr7_4:1088377-1088396 None:intergenic 20.0%
!! TAACTTATGATACTAATTGA+TGG + chr7_4:1088411-1088430 Msa1134560:intron 20.0%
!! AACTTATGATACTAATTGAT+GGG + chr7_4:1088412-1088431 Msa1134560:intron 20.0%
!! CCAACAATAAAAAGAAAAAA+CGG - chr7_4:1088612-1088631 None:intergenic 20.0%
!! ATATAGATCAAAGAATTCAA+AGG - chr7_4:1088727-1088746 None:intergenic 20.0%
!! TATCACAAAATTTAAGCAAA+AGG - chr7_4:1088939-1088958 None:intergenic 20.0%
!! ATGAATTTAAACTTCCAAAT+AGG - chr7_4:1090044-1090063 None:intergenic 20.0%
!! TCATTGAAATTTATATAGCA+TGG + chr7_4:1090667-1090686 Msa1134560:intron 20.0%
!! AATTTATATAGCATGGTTTA+TGG + chr7_4:1090674-1090693 Msa1134560:intron 20.0%
!! GTAATAAAAAACCAAAATGT+TGG - chr7_4:1090823-1090842 None:intergenic 20.0%
!!! GGTTTTTTATTACTTTCTTT+AGG + chr7_4:1090830-1090849 Msa1134560:intron 20.0%
!!! CAATGTTTTAAAAATTGAAC+CGG - chr7_4:1091899-1091918 None:intergenic 20.0%
!!! AATCATGATTTTCTATTATG+AGG + chr7_4:1091959-1091978 Msa1134560:intron 20.0%
!!! TGATTTTATCAATAGATTAG+AGG - chr7_4:1092236-1092255 None:intergenic 20.0%
!!! ATGATGCATATGATATATTT+TGG + chr7_4:1092265-1092284 Msa1134560:three_prime_UTR 20.0%
! TAAATGTATATAGCAGTAGA+TGG + chr7_4:1085048-1085067 Msa1134560:intron 25.0%
! AATGATGAAGATTTGGAAAT+GGG + chr7_4:1085139-1085158 Msa1134560:CDS 25.0%
! AAAAAGAAGCAAAATAAGGA+AGG - chr7_4:1085372-1085391 None:intergenic 25.0%
!!! TTGTTTTTTGTTTCCTTCAT+TGG + chr7_4:1085510-1085529 Msa1134560:intron 25.0%
! GTAGTAACATACAATGAATA+AGG + chr7_4:1085605-1085624 Msa1134560:intron 25.0%
! GAATAAGGTTTAATTCATGT+TGG + chr7_4:1085620-1085639 Msa1134560:intron 25.0%
!!! AAAATATAGAGGTATCAACT+AGG - chr7_4:1086316-1086335 None:intergenic 25.0%
!!! GTATTTTTGCTCAATGATAA+TGG + chr7_4:1086369-1086388 Msa1134560:intron 25.0%
!!! ATTTTTGCTCAATGATAATG+GGG + chr7_4:1086371-1086390 Msa1134560:intron 25.0%
!!! AGTTTTTGTTTAACAATTCC+TGG + chr7_4:1086687-1086706 Msa1134560:intron 25.0%
! CAATCATTGATATTACTCAT+AGG + chr7_4:1086845-1086864 Msa1134560:intron 25.0%
!!! GTTTATCATGCAACTTTTTT+AGG + chr7_4:1086904-1086923 Msa1134560:intron 25.0%
!! AGTAATCATAATTTTCCATG+AGG + chr7_4:1087702-1087721 Msa1134560:intron 25.0%
! AAACATTCTATAAGGCTAAA+AGG - chr7_4:1087793-1087812 None:intergenic 25.0%
!!! TTTTAGCCTTATAGAATGTT+TGG + chr7_4:1087792-1087811 Msa1134560:intron 25.0%
! GAATAGTTGAAGAAAGAAAA+AGG - chr7_4:1087847-1087866 None:intergenic 25.0%
! TAGTTTGAAAACGACAAATT+TGG + chr7_4:1087926-1087945 Msa1134560:intron 25.0%
!!! TGCATCGATAATTTACTTTT+AGG + chr7_4:1088026-1088045 Msa1134560:intron 25.0%
! GGCAAATATTAGTAATTTAG+TGG + chr7_4:1088047-1088066 Msa1134560:intron 25.0%
! ACACTTTCAATCTTAAGTAT+CGG + chr7_4:1088290-1088309 Msa1134560:intron 25.0%
!! GTTCAAACTCTAAAAACATA+TGG - chr7_4:1088320-1088339 None:intergenic 25.0%
! CAGTATAAATCAATGTAAGA+TGG - chr7_4:1088478-1088497 None:intergenic 25.0%
!!! CCGTTTTTTCTTTTTATTGT+TGG + chr7_4:1088609-1088628 Msa1134560:CDS 25.0%
! CAAAATTTAAGCAAAAGGTT+CGG - chr7_4:1088934-1088953 None:intergenic 25.0%
!!! TCTTTTTTTGATGAATGTCA+AGG + chr7_4:1088996-1089015 Msa1134560:intron 25.0%
!! AAGGTGTTAAAGTAAAATGT+TGG + chr7_4:1089015-1089034 Msa1134560:intron 25.0%
!! TTAAAGTAAAATGTTGGTGA+TGG + chr7_4:1089021-1089040 Msa1134560:intron 25.0%
!!! TGTTATTTCACAACATATAC+AGG - chr7_4:1089064-1089083 None:intergenic 25.0%
! ATTGCAATACATTACATACA+TGG - chr7_4:1089270-1089289 None:intergenic 25.0%
! ATATCGATACTTTCTCAAAA+GGG - chr7_4:1089659-1089678 None:intergenic 25.0%
!! TTTACATTTTCACACCTATT+TGG + chr7_4:1090027-1090046 Msa1134560:intron 25.0%
!! TTTTTAATAATCAGACGACT+AGG - chr7_4:1090347-1090366 None:intergenic 25.0%
!! GTGTAACTTTTTATTACAAC+AGG + chr7_4:1090430-1090449 Msa1134560:intron 25.0%
!! GAATTGCATTCTAAAAACAA+AGG - chr7_4:1090567-1090586 None:intergenic 25.0%
!! CTCTAATTTTGTGTCTATTA+TGG + chr7_4:1090715-1090734 Msa1134560:intron 25.0%
! TCATATTATTCTCCATTTCA+AGG + chr7_4:1090791-1090810 Msa1134560:intron 25.0%
! AGACTTTCAATATAAAGTGT+TGG + chr7_4:1090945-1090964 Msa1134560:intron 25.0%
! AATGTAAGATTCTAATTCTG+TGG - chr7_4:1091033-1091052 None:intergenic 25.0%
! ACAGAATTAGAATCTTACAT+TGG + chr7_4:1091032-1091051 Msa1134560:intron 25.0%
! AAGAAAGAGTTAAGAGATAA+TGG - chr7_4:1091114-1091133 None:intergenic 25.0%
! ATAGCTTATATGAAAACAGT+TGG + chr7_4:1091433-1091452 Msa1134560:intron 25.0%
! CTAAACAAATTACACAAACA+TGG + chr7_4:1091531-1091550 Msa1134560:intron 25.0%
!! AATTATTTTCTCTTGCTTAC+AGG + chr7_4:1091575-1091594 Msa1134560:intron 25.0%
! AAAATCCTTGAAGGAAAATT+GGG - chr7_4:1091695-1091714 None:intergenic 25.0%
! TAAAATCCTTGAAGGAAAAT+TGG - chr7_4:1091696-1091715 None:intergenic 25.0%
!! TTTTCCTTCAAGGATTTTAT+TGG + chr7_4:1091697-1091716 Msa1134560:intron 25.0%
!! TTTCCTTCAAGGATTTTATT+GGG + chr7_4:1091698-1091717 Msa1134560:intron 25.0%
! GAAATTACAATGTTGTTATG+AGG - chr7_4:1091729-1091748 None:intergenic 25.0%
! TTAGTAAATAACTGCAAAGT+GGG - chr7_4:1091758-1091777 None:intergenic 25.0%
! ATTAGTAAATAACTGCAAAG+TGG - chr7_4:1091759-1091778 None:intergenic 25.0%
!!! CAATGTTTTAAAAATCGAAC+CGG + chr7_4:1091785-1091804 Msa1134560:intron 25.0%
! AACAAACATTGTCTACAATT+TGG + chr7_4:1091818-1091837 Msa1134560:intron 25.0%
!!! CGGTTCAATTTTTAAAACAT+TGG + chr7_4:1091897-1091916 Msa1134560:intron 25.0%
!!! TGGAATTTTGAGAGAAATTT+TGG + chr7_4:1092169-1092188 Msa1134560:three_prime_UTR 25.0%
! TATTGATAAAATCACCTACA+TGG + chr7_4:1092242-1092261 Msa1134560:three_prime_UTR 25.0%
! GATACAAATTACCCAATATA+TGG - chr7_4:1092377-1092396 None:intergenic 25.0%
! TAAATGTATATAGCAGTAGA+TGG + chr7_4:1085048-1085067 Msa1134560:intron 25.0%
! AATGATGAAGATTTGGAAAT+GGG + chr7_4:1085139-1085158 Msa1134560:CDS 25.0%
! AAAAAGAAGCAAAATAAGGA+AGG - chr7_4:1085372-1085391 None:intergenic 25.0%
!!! TTGTTTTTTGTTTCCTTCAT+TGG + chr7_4:1085510-1085529 Msa1134560:intron 25.0%
! GTAGTAACATACAATGAATA+AGG + chr7_4:1085605-1085624 Msa1134560:intron 25.0%
! GAATAAGGTTTAATTCATGT+TGG + chr7_4:1085620-1085639 Msa1134560:intron 25.0%
!!! AAAATATAGAGGTATCAACT+AGG - chr7_4:1086316-1086335 None:intergenic 25.0%
!!! GTATTTTTGCTCAATGATAA+TGG + chr7_4:1086369-1086388 Msa1134560:intron 25.0%
!!! ATTTTTGCTCAATGATAATG+GGG + chr7_4:1086371-1086390 Msa1134560:intron 25.0%
!!! AGTTTTTGTTTAACAATTCC+TGG + chr7_4:1086687-1086706 Msa1134560:intron 25.0%
! CAATCATTGATATTACTCAT+AGG + chr7_4:1086845-1086864 Msa1134560:intron 25.0%
!!! GTTTATCATGCAACTTTTTT+AGG + chr7_4:1086904-1086923 Msa1134560:intron 25.0%
!! AGTAATCATAATTTTCCATG+AGG + chr7_4:1087702-1087721 Msa1134560:intron 25.0%
! AAACATTCTATAAGGCTAAA+AGG - chr7_4:1087793-1087812 None:intergenic 25.0%
!!! TTTTAGCCTTATAGAATGTT+TGG + chr7_4:1087792-1087811 Msa1134560:intron 25.0%
! GAATAGTTGAAGAAAGAAAA+AGG - chr7_4:1087847-1087866 None:intergenic 25.0%
! TAGTTTGAAAACGACAAATT+TGG + chr7_4:1087926-1087945 Msa1134560:intron 25.0%
!!! TGCATCGATAATTTACTTTT+AGG + chr7_4:1088026-1088045 Msa1134560:intron 25.0%
! GGCAAATATTAGTAATTTAG+TGG + chr7_4:1088047-1088066 Msa1134560:intron 25.0%
! ACACTTTCAATCTTAAGTAT+CGG + chr7_4:1088290-1088309 Msa1134560:intron 25.0%
!! GTTCAAACTCTAAAAACATA+TGG - chr7_4:1088320-1088339 None:intergenic 25.0%
! CAGTATAAATCAATGTAAGA+TGG - chr7_4:1088478-1088497 None:intergenic 25.0%
!!! CCGTTTTTTCTTTTTATTGT+TGG + chr7_4:1088609-1088628 Msa1134560:CDS 25.0%
! CAAAATTTAAGCAAAAGGTT+CGG - chr7_4:1088934-1088953 None:intergenic 25.0%
!!! TCTTTTTTTGATGAATGTCA+AGG + chr7_4:1088996-1089015 Msa1134560:intron 25.0%
!! AAGGTGTTAAAGTAAAATGT+TGG + chr7_4:1089015-1089034 Msa1134560:intron 25.0%
!! TTAAAGTAAAATGTTGGTGA+TGG + chr7_4:1089021-1089040 Msa1134560:intron 25.0%
!!! TGTTATTTCACAACATATAC+AGG - chr7_4:1089064-1089083 None:intergenic 25.0%
! ATTGCAATACATTACATACA+TGG - chr7_4:1089270-1089289 None:intergenic 25.0%
! ATATCGATACTTTCTCAAAA+GGG - chr7_4:1089659-1089678 None:intergenic 25.0%
!! TTTACATTTTCACACCTATT+TGG + chr7_4:1090027-1090046 Msa1134560:intron 25.0%
!! TTTTTAATAATCAGACGACT+AGG - chr7_4:1090347-1090366 None:intergenic 25.0%
!! GTGTAACTTTTTATTACAAC+AGG + chr7_4:1090430-1090449 Msa1134560:intron 25.0%
!! GAATTGCATTCTAAAAACAA+AGG - chr7_4:1090567-1090586 None:intergenic 25.0%
!! CTCTAATTTTGTGTCTATTA+TGG + chr7_4:1090715-1090734 Msa1134560:intron 25.0%
! TCATATTATTCTCCATTTCA+AGG + chr7_4:1090791-1090810 Msa1134560:intron 25.0%
! AGACTTTCAATATAAAGTGT+TGG + chr7_4:1090945-1090964 Msa1134560:intron 25.0%
! AATGTAAGATTCTAATTCTG+TGG - chr7_4:1091033-1091052 None:intergenic 25.0%
! ACAGAATTAGAATCTTACAT+TGG + chr7_4:1091032-1091051 Msa1134560:intron 25.0%
! AAGAAAGAGTTAAGAGATAA+TGG - chr7_4:1091114-1091133 None:intergenic 25.0%
! ATAGCTTATATGAAAACAGT+TGG + chr7_4:1091433-1091452 Msa1134560:intron 25.0%
! CTAAACAAATTACACAAACA+TGG + chr7_4:1091531-1091550 Msa1134560:intron 25.0%
!! AATTATTTTCTCTTGCTTAC+AGG + chr7_4:1091575-1091594 Msa1134560:intron 25.0%
! AAAATCCTTGAAGGAAAATT+GGG - chr7_4:1091695-1091714 None:intergenic 25.0%
! TAAAATCCTTGAAGGAAAAT+TGG - chr7_4:1091696-1091715 None:intergenic 25.0%
!! TTTTCCTTCAAGGATTTTAT+TGG + chr7_4:1091697-1091716 Msa1134560:intron 25.0%
!! TTTCCTTCAAGGATTTTATT+GGG + chr7_4:1091698-1091717 Msa1134560:intron 25.0%
! GAAATTACAATGTTGTTATG+AGG - chr7_4:1091729-1091748 None:intergenic 25.0%
! TTAGTAAATAACTGCAAAGT+GGG - chr7_4:1091758-1091777 None:intergenic 25.0%
! ATTAGTAAATAACTGCAAAG+TGG - chr7_4:1091759-1091778 None:intergenic 25.0%
!!! CAATGTTTTAAAAATCGAAC+CGG + chr7_4:1091785-1091804 Msa1134560:intron 25.0%
! AACAAACATTGTCTACAATT+TGG + chr7_4:1091818-1091837 Msa1134560:intron 25.0%
!!! CGGTTCAATTTTTAAAACAT+TGG + chr7_4:1091897-1091916 Msa1134560:intron 25.0%
!!! TGGAATTTTGAGAGAAATTT+TGG + chr7_4:1092169-1092188 Msa1134560:three_prime_UTR 25.0%
! TATTGATAAAATCACCTACA+TGG + chr7_4:1092242-1092261 Msa1134560:three_prime_UTR 25.0%
! GATACAAATTACCCAATATA+TGG - chr7_4:1092377-1092396 None:intergenic 25.0%
AGAAACAATGCAATATGGTA+GGG - chr7_4:1084934-1084953 None:intergenic 30.0%
AAGAAACAATGCAATATGGT+AGG - chr7_4:1084935-1084954 None:intergenic 30.0%
CTTGAAGAAACAATGCAATA+TGG - chr7_4:1084939-1084958 None:intergenic 30.0%
TGAAGAGAATGATGAAGATT+TGG + chr7_4:1085132-1085151 Msa1134560:CDS 30.0%
GAATGATGAAGATTTGGAAA+TGG + chr7_4:1085138-1085157 Msa1134560:CDS 30.0%
TAATCTTTGTAGCTGAATCA+TGG - chr7_4:1085186-1085205 None:intergenic 30.0%
! TTGTTTCCTTCATTGGATTT+TGG + chr7_4:1085517-1085536 Msa1134560:intron 30.0%
! TGTTTCCTTCATTGGATTTT+GGG + chr7_4:1085518-1085537 Msa1134560:intron 30.0%
TTAATTCATGTTGGTCAAGT+TGG + chr7_4:1085629-1085648 Msa1134560:intron 30.0%
ACTTACGATCTTATGAGATA+CGG - chr7_4:1085656-1085675 None:intergenic 30.0%
TAGGTACTTTGTACTTATGT+TGG + chr7_4:1085707-1085726 Msa1134560:intron 30.0%
TCAAGTAGTACCAACAAATT+GGG - chr7_4:1085967-1085986 None:intergenic 30.0%
TAAACGAACTCTACAAAAGA+GGG - chr7_4:1086448-1086467 None:intergenic 30.0%
! TTTTCATCTTTATAAACGCG+CGG + chr7_4:1086994-1087013 Msa1134560:intron 30.0%
!!! TTTTGTAGGCTTGTTAAGTT+GGG - chr7_4:1087146-1087165 None:intergenic 30.0%
!!! TTTTTGTAGGCTTGTTAAGT+TGG - chr7_4:1087147-1087166 None:intergenic 30.0%
! AATGTATTGACACCAACATA+CGG + chr7_4:1087533-1087552 Msa1134560:intron 30.0%
! TTTCCATGAGGAAATGTTTT+AGG + chr7_4:1087714-1087733 Msa1134560:intron 30.0%
!! TTTTAGGTCTAGACATTGTT+TGG + chr7_4:1087730-1087749 Msa1134560:intron 30.0%
TGAAAACGACAAATTTGGTT+AGG + chr7_4:1087931-1087950 Msa1134560:intron 30.0%
TATGTTTGCTTTACACTATG+AGG + chr7_4:1088071-1088090 Msa1134560:intron 30.0%
TGCTATTCATTCTTAGACAA+CGG + chr7_4:1088145-1088164 Msa1134560:intron 30.0%
TCATTTATTATTTGCCTAGG+AGG - chr7_4:1088374-1088393 None:intergenic 30.0%
TTCTGTTCAAGAAACAGATA+AGG - chr7_4:1088824-1088843 None:intergenic 30.0%
TTGTGAAATAACAGCTATAG+CGG + chr7_4:1089071-1089090 Msa1134560:intron 30.0%
TAGTGTATCACAAAACAACA+GGG - chr7_4:1089130-1089149 None:intergenic 30.0%
ATAGTGTATCACAAAACAAC+AGG - chr7_4:1089131-1089150 None:intergenic 30.0%
! AACGAAGTTCTAACTTCATA+GGG - chr7_4:1089496-1089515 None:intergenic 30.0%
GATATCGATACTTTCTCAAA+AGG - chr7_4:1089660-1089679 None:intergenic 30.0%
!! TGAGAAAGTATCGATATCAA+TGG + chr7_4:1089662-1089681 Msa1134560:intron 30.0%
! TTTTGAATATAACAGGGCTT+TGG + chr7_4:1089881-1089900 Msa1134560:intron 30.0%
!! ATTTATCTTTGCTTGCTGTA+TGG + chr7_4:1089921-1089940 Msa1134560:CDS 30.0%
!! TTTATCTTTGCTTGCTGTAT+GGG + chr7_4:1089922-1089941 Msa1134560:CDS 30.0%
!! AATTTCATAGGTTCTGAAGA+AGG - chr7_4:1089987-1090006 None:intergenic 30.0%
ACACTCACAGAAAATTTCAT+AGG - chr7_4:1089999-1090018 None:intergenic 30.0%
TATCTATCTGAACATGTGTT+AGG + chr7_4:1090114-1090133 Msa1134560:intron 30.0%
AACATGTGTTAGGTTAAATG+TGG + chr7_4:1090124-1090143 Msa1134560:intron 30.0%
AATTGGTTGTAAGTTGTTGA+CGG + chr7_4:1090408-1090427 Msa1134560:intron 30.0%
AGTATAAATTCTCCTGACTA+TGG + chr7_4:1090458-1090477 Msa1134560:intron 30.0%
TTCTCGATATGAAGGAAAAT+TGG + chr7_4:1090584-1090603 Msa1134560:intron 30.0%
ATGGAATTATAGTTCAGTGA+TGG + chr7_4:1090734-1090753 Msa1134560:intron 30.0%
TTCCTTATATTGCTAAATGC+AGG + chr7_4:1091006-1091025 Msa1134560:intron 30.0%
ATGGTTACCAAATAAATCCA+AGG - chr7_4:1091095-1091114 None:intergenic 30.0%
! ATAAGCTCTTGTTGTAATGT+AGG + chr7_4:1091165-1091184 Msa1134560:intron 30.0%
CTTTGCTGGAATATATTTGA+TGG + chr7_4:1091257-1091276 Msa1134560:CDS 30.0%
TAGTAATAACTCTTCTGCAT+TGG + chr7_4:1091281-1091300 Msa1134560:intron 30.0%
GCTTATGACATGTTCATAAA+CGG + chr7_4:1091350-1091369 Msa1134560:intron 30.0%
! ATTTTCCCAATTTTCCTTCA+AGG + chr7_4:1091687-1091706 Msa1134560:intron 30.0%
! TTCCTTCAAGGATTTTATTG+GGG + chr7_4:1091699-1091718 Msa1134560:intron 30.0%
!!! CGGTTCGATTTTTAAAACAT+TGG - chr7_4:1091787-1091806 None:intergenic 30.0%
ATGTTTGTTCAAGGTTTAAC+CGG - chr7_4:1091807-1091826 None:intergenic 30.0%
TTGTAGACAATGTTTGTTCA+AGG - chr7_4:1091816-1091835 None:intergenic 30.0%
CTACAATTTGGTTATTTGAG+CGG + chr7_4:1091830-1091849 Msa1134560:intron 30.0%
TTATTAGCGCATGAAAAATG+TGG - chr7_4:1091985-1092004 None:intergenic 30.0%
TTGTCACAGCTAAAGTTAAT+TGG + chr7_4:1092027-1092046 Msa1134560:intron 30.0%
ATATGATGACTGCCATATAT+TGG + chr7_4:1092362-1092381 Msa1134560:three_prime_UTR 30.0%
TATGATGACTGCCATATATT+GGG + chr7_4:1092363-1092382 Msa1134560:three_prime_UTR 30.0%
AGAAACAATGCAATATGGTA+GGG - chr7_4:1084934-1084953 None:intergenic 30.0%
AAGAAACAATGCAATATGGT+AGG - chr7_4:1084935-1084954 None:intergenic 30.0%
CTTGAAGAAACAATGCAATA+TGG - chr7_4:1084939-1084958 None:intergenic 30.0%
TGAAGAGAATGATGAAGATT+TGG + chr7_4:1085132-1085151 Msa1134560:CDS 30.0%
GAATGATGAAGATTTGGAAA+TGG + chr7_4:1085138-1085157 Msa1134560:CDS 30.0%
TAATCTTTGTAGCTGAATCA+TGG - chr7_4:1085186-1085205 None:intergenic 30.0%
! TTGTTTCCTTCATTGGATTT+TGG + chr7_4:1085517-1085536 Msa1134560:intron 30.0%
! TGTTTCCTTCATTGGATTTT+GGG + chr7_4:1085518-1085537 Msa1134560:intron 30.0%
TTAATTCATGTTGGTCAAGT+TGG + chr7_4:1085629-1085648 Msa1134560:intron 30.0%
ACTTACGATCTTATGAGATA+CGG - chr7_4:1085656-1085675 None:intergenic 30.0%
TAGGTACTTTGTACTTATGT+TGG + chr7_4:1085707-1085726 Msa1134560:intron 30.0%
TCAAGTAGTACCAACAAATT+GGG - chr7_4:1085967-1085986 None:intergenic 30.0%
TAAACGAACTCTACAAAAGA+GGG - chr7_4:1086448-1086467 None:intergenic 30.0%
! TTTTCATCTTTATAAACGCG+CGG + chr7_4:1086994-1087013 Msa1134560:intron 30.0%
!!! TTTTGTAGGCTTGTTAAGTT+GGG - chr7_4:1087146-1087165 None:intergenic 30.0%
!!! TTTTTGTAGGCTTGTTAAGT+TGG - chr7_4:1087147-1087166 None:intergenic 30.0%
! AATGTATTGACACCAACATA+CGG + chr7_4:1087533-1087552 Msa1134560:intron 30.0%
! TTTCCATGAGGAAATGTTTT+AGG + chr7_4:1087714-1087733 Msa1134560:intron 30.0%
!! TTTTAGGTCTAGACATTGTT+TGG + chr7_4:1087730-1087749 Msa1134560:intron 30.0%
TGAAAACGACAAATTTGGTT+AGG + chr7_4:1087931-1087950 Msa1134560:intron 30.0%
TATGTTTGCTTTACACTATG+AGG + chr7_4:1088071-1088090 Msa1134560:intron 30.0%
TGCTATTCATTCTTAGACAA+CGG + chr7_4:1088145-1088164 Msa1134560:intron 30.0%
TCATTTATTATTTGCCTAGG+AGG - chr7_4:1088374-1088393 None:intergenic 30.0%
TTCTGTTCAAGAAACAGATA+AGG - chr7_4:1088824-1088843 None:intergenic 30.0%
TTGTGAAATAACAGCTATAG+CGG + chr7_4:1089071-1089090 Msa1134560:intron 30.0%
TAGTGTATCACAAAACAACA+GGG - chr7_4:1089130-1089149 None:intergenic 30.0%
ATAGTGTATCACAAAACAAC+AGG - chr7_4:1089131-1089150 None:intergenic 30.0%
! AACGAAGTTCTAACTTCATA+GGG - chr7_4:1089496-1089515 None:intergenic 30.0%
GATATCGATACTTTCTCAAA+AGG - chr7_4:1089660-1089679 None:intergenic 30.0%
!! TGAGAAAGTATCGATATCAA+TGG + chr7_4:1089662-1089681 Msa1134560:intron 30.0%
! TTTTGAATATAACAGGGCTT+TGG + chr7_4:1089881-1089900 Msa1134560:intron 30.0%
!! ATTTATCTTTGCTTGCTGTA+TGG + chr7_4:1089921-1089940 Msa1134560:CDS 30.0%
!! TTTATCTTTGCTTGCTGTAT+GGG + chr7_4:1089922-1089941 Msa1134560:CDS 30.0%
!! AATTTCATAGGTTCTGAAGA+AGG - chr7_4:1089987-1090006 None:intergenic 30.0%
ACACTCACAGAAAATTTCAT+AGG - chr7_4:1089999-1090018 None:intergenic 30.0%
TATCTATCTGAACATGTGTT+AGG + chr7_4:1090114-1090133 Msa1134560:intron 30.0%
AACATGTGTTAGGTTAAATG+TGG + chr7_4:1090124-1090143 Msa1134560:intron 30.0%
AATTGGTTGTAAGTTGTTGA+CGG + chr7_4:1090408-1090427 Msa1134560:intron 30.0%
AGTATAAATTCTCCTGACTA+TGG + chr7_4:1090458-1090477 Msa1134560:intron 30.0%
TTCTCGATATGAAGGAAAAT+TGG + chr7_4:1090584-1090603 Msa1134560:intron 30.0%
ATGGAATTATAGTTCAGTGA+TGG + chr7_4:1090734-1090753 Msa1134560:intron 30.0%
TTCCTTATATTGCTAAATGC+AGG + chr7_4:1091006-1091025 Msa1134560:intron 30.0%
ATGGTTACCAAATAAATCCA+AGG - chr7_4:1091095-1091114 None:intergenic 30.0%
! ATAAGCTCTTGTTGTAATGT+AGG + chr7_4:1091165-1091184 Msa1134560:intron 30.0%
CTTTGCTGGAATATATTTGA+TGG + chr7_4:1091257-1091276 Msa1134560:CDS 30.0%
TAGTAATAACTCTTCTGCAT+TGG + chr7_4:1091281-1091300 Msa1134560:intron 30.0%
GCTTATGACATGTTCATAAA+CGG + chr7_4:1091350-1091369 Msa1134560:intron 30.0%
! ATTTTCCCAATTTTCCTTCA+AGG + chr7_4:1091687-1091706 Msa1134560:intron 30.0%
! TTCCTTCAAGGATTTTATTG+GGG + chr7_4:1091699-1091718 Msa1134560:intron 30.0%
!!! CGGTTCGATTTTTAAAACAT+TGG - chr7_4:1091787-1091806 None:intergenic 30.0%
ATGTTTGTTCAAGGTTTAAC+CGG - chr7_4:1091807-1091826 None:intergenic 30.0%
TTGTAGACAATGTTTGTTCA+AGG - chr7_4:1091816-1091835 None:intergenic 30.0%
CTACAATTTGGTTATTTGAG+CGG + chr7_4:1091830-1091849 Msa1134560:intron 30.0%
TTATTAGCGCATGAAAAATG+TGG - chr7_4:1091985-1092004 None:intergenic 30.0%
TTGTCACAGCTAAAGTTAAT+TGG + chr7_4:1092027-1092046 Msa1134560:intron 30.0%
ATATGATGACTGCCATATAT+TGG + chr7_4:1092362-1092381 Msa1134560:three_prime_UTR 30.0%
TATGATGACTGCCATATATT+GGG + chr7_4:1092363-1092382 Msa1134560:three_prime_UTR 30.0%
! CTTCTTCTCTTACTGTTTCT+TGG - chr7_4:1084836-1084855 None:intergenic 35.0%
ATGTATATAGCAGTAGATGG+TGG + chr7_4:1085051-1085070 Msa1134560:intron 35.0%
! CTTTCACTTGATGTTTTTCG+TGG + chr7_4:1085319-1085338 Msa1134560:CDS 35.0%
CTTACGATCTTATGAGATAC+GGG - chr7_4:1085655-1085674 None:intergenic 35.0%
! GTAAGTTCAACTCTTGTTTC+AGG + chr7_4:1085670-1085689 Msa1134560:intron 35.0%
GTCAAGTAGTACCAACAAAT+TGG - chr7_4:1085968-1085987 None:intergenic 35.0%
CGTAATGGTATGTAAATGGA+CGG - chr7_4:1086148-1086167 None:intergenic 35.0%
CGTCCATTTACATACCATTA+CGG + chr7_4:1086146-1086165 Msa1134560:intron 35.0%
TAGCCGTAATGGTATGTAAA+TGG - chr7_4:1086152-1086171 None:intergenic 35.0%
!!! AGAGGTATCAACTAGGTTTT+CGG - chr7_4:1086309-1086328 None:intergenic 35.0%
GTAAACGAACTCTACAAAAG+AGG - chr7_4:1086449-1086468 None:intergenic 35.0%
GCTTTGCAGATGACTAATAT+AGG - chr7_4:1086471-1086490 None:intergenic 35.0%
!!! CCATATTCTGTTTTAGTGGA+CGG - chr7_4:1086493-1086512 None:intergenic 35.0%
!! GTAGCCATATTCTGTTTTAG+TGG - chr7_4:1086497-1086516 None:intergenic 35.0%
TTTCATCTTTATAAACGCGC+GGG + chr7_4:1086995-1087014 Msa1134560:intron 35.0%
!! TTTGTAGGCTTGTTAAGTTG+GGG - chr7_4:1087145-1087164 None:intergenic 35.0%
CTAACCAACTACACGTTATT+AGG - chr7_4:1087286-1087305 None:intergenic 35.0%
!! TCACCATGTTGCTTTATCAA+TGG + chr7_4:1087337-1087356 Msa1134560:intron 35.0%
!! CACCATGTTGCTTTATCAAT+GGG + chr7_4:1087338-1087357 Msa1134560:intron 35.0%
TTCCCATTGATAAAGCAACA+TGG - chr7_4:1087343-1087362 None:intergenic 35.0%
ATGAAGCACGAACACATATA+CGG - chr7_4:1087640-1087659 None:intergenic 35.0%
TGTTAGAAGTTGCATGCAAA+AGG - chr7_4:1087677-1087696 None:intergenic 35.0%
TTGCATGCAACTTCTAACAT+TGG + chr7_4:1087678-1087697 Msa1134560:intron 35.0%
AGACCTAAAACATTTCCTCA+TGG - chr7_4:1087720-1087739 None:intergenic 35.0%
TTATCCATGCCAGTTTCATT+AGG - chr7_4:1087760-1087779 None:intergenic 35.0%
! GAAGCACCAAACATTCTATA+AGG - chr7_4:1087801-1087820 None:intergenic 35.0%
!! GTCTTGTTTAAACTTTGGTC+TGG + chr7_4:1087962-1087981 Msa1134560:intron 35.0%
AACTTTGGTCTGGTGTAATT+TGG + chr7_4:1087972-1087991 Msa1134560:intron 35.0%
!!! GGAGTTTTAAACGTGAAGTT+TGG - chr7_4:1088344-1088363 None:intergenic 35.0%
! CTTCACGTTTAAAACTCCTT+TGG + chr7_4:1088346-1088365 Msa1134560:intron 35.0%
CTCAATGCAGCTTATGATAT+TGG + chr7_4:1088509-1088528 Msa1134560:intron 35.0%
AATGCAGCTTATGATATTGG+TGG + chr7_4:1088512-1088531 Msa1134560:intron 35.0%
GCTATTGTTAAACCATTCCA+TGG - chr7_4:1088576-1088595 None:intergenic 35.0%
! GCATTAGGCATTTTTCTTCA+AGG + chr7_4:1088902-1088921 Msa1134560:CDS 35.0%
! ATTTAAGCAAAAGGTTCGGT+TGG - chr7_4:1088930-1088949 None:intergenic 35.0%
! TTGACGGTTTGTTCAAATTC+CGG - chr7_4:1089210-1089229 None:intergenic 35.0%
CGATCTACGATTGACAAAAT+TGG + chr7_4:1089236-1089255 Msa1134560:intron 35.0%
! TATTGCAATTTGTCGTTTGC+AGG + chr7_4:1089281-1089300 Msa1134560:intron 35.0%
! TTTGAAGCAGATAAGGTTGA+TGG + chr7_4:1089346-1089365 Msa1134560:intron 35.0%
! TTGAAGCAGATAAGGTTGAT+GGG + chr7_4:1089347-1089366 Msa1134560:intron 35.0%
! CAACGAAGTTCTAACTTCAT+AGG - chr7_4:1089497-1089516 None:intergenic 35.0%
TTACAGCTCTCTGTGAAATT+TGG + chr7_4:1089599-1089618 Msa1134560:CDS 35.0%
CGTGAAGATATCGTTAATTC+TGG + chr7_4:1089628-1089647 Msa1134560:CDS 35.0%
GACTTGAGACACAAGTTAAA+GGG - chr7_4:1089830-1089849 None:intergenic 35.0%
TGACTTGAGACACAAGTTAA+AGG - chr7_4:1089831-1089850 None:intergenic 35.0%
!! TTAACTTGTGTCTCAAGTCA+TGG + chr7_4:1089831-1089850 Msa1134560:intron 35.0%
TAGGTTAAATGTGGAGTAAG+AGG + chr7_4:1090133-1090152 Msa1134560:intron 35.0%
TGGGTTTACAACATCTATAC+CGG + chr7_4:1090206-1090225 Msa1134560:intron 35.0%
! AAGAGTATAGAGGATCATAC+AGG - chr7_4:1090253-1090272 None:intergenic 35.0%
! CAGAACAACTAAGAGTATAG+AGG - chr7_4:1090263-1090282 None:intergenic 35.0%
GAATGCAATTCTCGATATGA+AGG + chr7_4:1090576-1090595 Msa1134560:intron 35.0%
TGTTGGGAATTACCTTGAAA+TGG - chr7_4:1090806-1090825 None:intergenic 35.0%
! CAAGGTAATTCCCAACATTT+TGG + chr7_4:1090809-1090828 Msa1134560:intron 35.0%
! ATTACATTTGAAAGCGTGTC+TGG - chr7_4:1090893-1090912 None:intergenic 35.0%
TGTAATCACATGTATCGTGT+CGG + chr7_4:1090907-1090926 Msa1134560:intron 35.0%
GTCCTGCATTTAGCAATATA+AGG - chr7_4:1091011-1091030 None:intergenic 35.0%
! ACTTCGATTTTCCAATGGAT+AGG + chr7_4:1091624-1091643 Msa1134560:intron 35.0%
TTCCCCAATAAAATCCTTGA+AGG - chr7_4:1091704-1091723 None:intergenic 35.0%
AATTGAACCGGCAAGATATA+TGG - chr7_4:1091887-1091906 None:intergenic 35.0%
CAGCTAAAGTTAATTGGAGT+TGG + chr7_4:1092033-1092052 Msa1134560:intron 35.0%
TAATTGGAGTTGGATCATGA+AGG + chr7_4:1092043-1092062 Msa1134560:CDS 35.0%
GTTTCACCTATGTCTTAATG+AGG + chr7_4:1092128-1092147 Msa1134560:three_prime_UTR 35.0%
AAAATTCCACCAACAATGCT+TGG - chr7_4:1092158-1092177 None:intergenic 35.0%
!!! TTTGAGAGAAATTTTGGAGC+TGG + chr7_4:1092175-1092194 Msa1134560:three_prime_UTR 35.0%
ATCATATGCATCATCCATGT+AGG - chr7_4:1092259-1092278 None:intergenic 35.0%
GGAGAAGTTACATTTCTTCA+TGG + chr7_4:1092286-1092305 Msa1134560:three_prime_UTR 35.0%
! CTTCTTCTCTTACTGTTTCT+TGG - chr7_4:1084836-1084855 None:intergenic 35.0%
ATGTATATAGCAGTAGATGG+TGG + chr7_4:1085051-1085070 Msa1134560:intron 35.0%
! CTTTCACTTGATGTTTTTCG+TGG + chr7_4:1085319-1085338 Msa1134560:CDS 35.0%
CTTACGATCTTATGAGATAC+GGG - chr7_4:1085655-1085674 None:intergenic 35.0%
! GTAAGTTCAACTCTTGTTTC+AGG + chr7_4:1085670-1085689 Msa1134560:intron 35.0%
GTCAAGTAGTACCAACAAAT+TGG - chr7_4:1085968-1085987 None:intergenic 35.0%
CGTAATGGTATGTAAATGGA+CGG - chr7_4:1086148-1086167 None:intergenic 35.0%
CGTCCATTTACATACCATTA+CGG + chr7_4:1086146-1086165 Msa1134560:intron 35.0%
TAGCCGTAATGGTATGTAAA+TGG - chr7_4:1086152-1086171 None:intergenic 35.0%
!!! AGAGGTATCAACTAGGTTTT+CGG - chr7_4:1086309-1086328 None:intergenic 35.0%
GTAAACGAACTCTACAAAAG+AGG - chr7_4:1086449-1086468 None:intergenic 35.0%
GCTTTGCAGATGACTAATAT+AGG - chr7_4:1086471-1086490 None:intergenic 35.0%
!!! CCATATTCTGTTTTAGTGGA+CGG - chr7_4:1086493-1086512 None:intergenic 35.0%
!! GTAGCCATATTCTGTTTTAG+TGG - chr7_4:1086497-1086516 None:intergenic 35.0%
TTTCATCTTTATAAACGCGC+GGG + chr7_4:1086995-1087014 Msa1134560:intron 35.0%
!! TTTGTAGGCTTGTTAAGTTG+GGG - chr7_4:1087145-1087164 None:intergenic 35.0%
CTAACCAACTACACGTTATT+AGG - chr7_4:1087286-1087305 None:intergenic 35.0%
!! TCACCATGTTGCTTTATCAA+TGG + chr7_4:1087337-1087356 Msa1134560:intron 35.0%
!! CACCATGTTGCTTTATCAAT+GGG + chr7_4:1087338-1087357 Msa1134560:intron 35.0%
TTCCCATTGATAAAGCAACA+TGG - chr7_4:1087343-1087362 None:intergenic 35.0%
ATGAAGCACGAACACATATA+CGG - chr7_4:1087640-1087659 None:intergenic 35.0%
TGTTAGAAGTTGCATGCAAA+AGG - chr7_4:1087677-1087696 None:intergenic 35.0%
TTGCATGCAACTTCTAACAT+TGG + chr7_4:1087678-1087697 Msa1134560:intron 35.0%
AGACCTAAAACATTTCCTCA+TGG - chr7_4:1087720-1087739 None:intergenic 35.0%
TTATCCATGCCAGTTTCATT+AGG - chr7_4:1087760-1087779 None:intergenic 35.0%
! GAAGCACCAAACATTCTATA+AGG - chr7_4:1087801-1087820 None:intergenic 35.0%
!! GTCTTGTTTAAACTTTGGTC+TGG + chr7_4:1087962-1087981 Msa1134560:intron 35.0%
AACTTTGGTCTGGTGTAATT+TGG + chr7_4:1087972-1087991 Msa1134560:intron 35.0%
!!! GGAGTTTTAAACGTGAAGTT+TGG - chr7_4:1088344-1088363 None:intergenic 35.0%
! CTTCACGTTTAAAACTCCTT+TGG + chr7_4:1088346-1088365 Msa1134560:intron 35.0%
CTCAATGCAGCTTATGATAT+TGG + chr7_4:1088509-1088528 Msa1134560:intron 35.0%
AATGCAGCTTATGATATTGG+TGG + chr7_4:1088512-1088531 Msa1134560:intron 35.0%
GCTATTGTTAAACCATTCCA+TGG - chr7_4:1088576-1088595 None:intergenic 35.0%
! GCATTAGGCATTTTTCTTCA+AGG + chr7_4:1088902-1088921 Msa1134560:CDS 35.0%
! ATTTAAGCAAAAGGTTCGGT+TGG - chr7_4:1088930-1088949 None:intergenic 35.0%
! TTGACGGTTTGTTCAAATTC+CGG - chr7_4:1089210-1089229 None:intergenic 35.0%
CGATCTACGATTGACAAAAT+TGG + chr7_4:1089236-1089255 Msa1134560:intron 35.0%
! TATTGCAATTTGTCGTTTGC+AGG + chr7_4:1089281-1089300 Msa1134560:intron 35.0%
! TTTGAAGCAGATAAGGTTGA+TGG + chr7_4:1089346-1089365 Msa1134560:intron 35.0%
! TTGAAGCAGATAAGGTTGAT+GGG + chr7_4:1089347-1089366 Msa1134560:intron 35.0%
! CAACGAAGTTCTAACTTCAT+AGG - chr7_4:1089497-1089516 None:intergenic 35.0%
TTACAGCTCTCTGTGAAATT+TGG + chr7_4:1089599-1089618 Msa1134560:CDS 35.0%
CGTGAAGATATCGTTAATTC+TGG + chr7_4:1089628-1089647 Msa1134560:CDS 35.0%
GACTTGAGACACAAGTTAAA+GGG - chr7_4:1089830-1089849 None:intergenic 35.0%
TGACTTGAGACACAAGTTAA+AGG - chr7_4:1089831-1089850 None:intergenic 35.0%
!! TTAACTTGTGTCTCAAGTCA+TGG + chr7_4:1089831-1089850 Msa1134560:intron 35.0%
TAGGTTAAATGTGGAGTAAG+AGG + chr7_4:1090133-1090152 Msa1134560:intron 35.0%
TGGGTTTACAACATCTATAC+CGG + chr7_4:1090206-1090225 Msa1134560:intron 35.0%
! AAGAGTATAGAGGATCATAC+AGG - chr7_4:1090253-1090272 None:intergenic 35.0%
! CAGAACAACTAAGAGTATAG+AGG - chr7_4:1090263-1090282 None:intergenic 35.0%
GAATGCAATTCTCGATATGA+AGG + chr7_4:1090576-1090595 Msa1134560:intron 35.0%
TGTTGGGAATTACCTTGAAA+TGG - chr7_4:1090806-1090825 None:intergenic 35.0%
! CAAGGTAATTCCCAACATTT+TGG + chr7_4:1090809-1090828 Msa1134560:intron 35.0%
! ATTACATTTGAAAGCGTGTC+TGG - chr7_4:1090893-1090912 None:intergenic 35.0%
TGTAATCACATGTATCGTGT+CGG + chr7_4:1090907-1090926 Msa1134560:intron 35.0%
GTCCTGCATTTAGCAATATA+AGG - chr7_4:1091011-1091030 None:intergenic 35.0%
! ACTTCGATTTTCCAATGGAT+AGG + chr7_4:1091624-1091643 Msa1134560:intron 35.0%
TTCCCCAATAAAATCCTTGA+AGG - chr7_4:1091704-1091723 None:intergenic 35.0%
AATTGAACCGGCAAGATATA+TGG - chr7_4:1091887-1091906 None:intergenic 35.0%
CAGCTAAAGTTAATTGGAGT+TGG + chr7_4:1092033-1092052 Msa1134560:intron 35.0%
TAATTGGAGTTGGATCATGA+AGG + chr7_4:1092043-1092062 Msa1134560:CDS 35.0%
GTTTCACCTATGTCTTAATG+AGG + chr7_4:1092128-1092147 Msa1134560:three_prime_UTR 35.0%
AAAATTCCACCAACAATGCT+TGG - chr7_4:1092158-1092177 None:intergenic 35.0%
!!! TTTGAGAGAAATTTTGGAGC+TGG + chr7_4:1092175-1092194 Msa1134560:three_prime_UTR 35.0%
ATCATATGCATCATCCATGT+AGG - chr7_4:1092259-1092278 None:intergenic 35.0%
GGAGAAGTTACATTTCTTCA+TGG + chr7_4:1092286-1092305 Msa1134560:three_prime_UTR 35.0%
CAATGCAATATGGTAGGGTT+AGG - chr7_4:1084929-1084948 None:intergenic 40.0%
AGCAATCGTTGAGAAGTTTG+AGG - chr7_4:1085301-1085320 None:intergenic 40.0%
!! TCCTTCATTGGATTTTGGGT+TGG + chr7_4:1085522-1085541 Msa1134560:intron 40.0%
!!! CCTTCATTGGATTTTGGGTT+GGG + chr7_4:1085523-1085542 Msa1134560:intron 40.0%
!!! TTTTGGGTTGGGTTGTGTTT+TGG + chr7_4:1085534-1085553 Msa1134560:intron 40.0%
TCAGGTGCAAGTACATAGTT+AGG + chr7_4:1085688-1085707 Msa1134560:intron 40.0%
!! TGATTGACTTGAGAGTGTTG+AGG + chr7_4:1085896-1085915 Msa1134560:intron 40.0%
!! ACTTGAGAGTGTTGAGGTAA+AGG + chr7_4:1085902-1085921 Msa1134560:intron 40.0%
!! CTTGAGAGTGTTGAGGTAAA+GGG + chr7_4:1085903-1085922 Msa1134560:intron 40.0%
GGATGCTATACCCAATTTGT+TGG + chr7_4:1085954-1085973 Msa1134560:intron 40.0%
AGAGAATCCAAAGAGTTTGC+AGG + chr7_4:1085993-1086012 Msa1134560:intron 40.0%
CCGTCCACTAAAACAGAATA+TGG + chr7_4:1086490-1086509 Msa1134560:intron 40.0%
GGAAGAGGTGAAACTTAGAT+TGG - chr7_4:1087091-1087110 None:intergenic 40.0%
TACCTAATCTTGATGGGAAG+AGG - chr7_4:1087106-1087125 None:intergenic 40.0%
!! TTGTAGGCTTGTTAAGTTGG+GGG - chr7_4:1087144-1087163 None:intergenic 40.0%
GTGTCCTAATAACGTGTAGT+TGG + chr7_4:1087279-1087298 Msa1134560:intron 40.0%
TGATAAAGCAACATGGTGAG+TGG - chr7_4:1087336-1087355 None:intergenic 40.0%
AATCACATGTGTCCGTATGT+TGG - chr7_4:1087548-1087567 None:intergenic 40.0%
! GTGTCAGTTTTCATGTTGTC+TGG + chr7_4:1087611-1087630 Msa1134560:intron 40.0%
! TTTGGTGTGCCTAATGAAAC+TGG + chr7_4:1087748-1087767 Msa1134560:intron 40.0%
!! AATGTTTGGTGCTTCTCACA+TGG + chr7_4:1087806-1087825 Msa1134560:intron 40.0%
!! ATGTTTGGTGCTTCTCACAT+GGG + chr7_4:1087807-1087826 Msa1134560:intron 40.0%
TGGTCTGGTGTAATTTGGTT+AGG + chr7_4:1087977-1087996 Msa1134560:intron 40.0%
ATTCGTGTCTTTGCATGTAC+CGG - chr7_4:1088105-1088124 None:intergenic 40.0%
!! CTTACGCATAAGTGTTGAGT+TGG + chr7_4:1088254-1088273 Msa1134560:intron 40.0%
! ATGATATTGGTGGATGATGC+TGG + chr7_4:1088522-1088541 Msa1134560:CDS 40.0%
CTCAATCATTCTCCATGGAA+TGG + chr7_4:1088561-1088580 Msa1134560:CDS 40.0%
TGCACTAGCATTCACATACA+AGG + chr7_4:1088635-1088654 Msa1134560:CDS 40.0%
CTAGCATTCACATACAAGGT+TGG + chr7_4:1088639-1088658 Msa1134560:intron 40.0%
!! CAAAGTTGATGCGACTAGAA+AGG + chr7_4:1088853-1088872 Msa1134560:CDS 40.0%
TCGTAGATCGCGTAAATTGA+CGG - chr7_4:1089226-1089245 None:intergenic 40.0%
TAGTGATTTGACGTTTGGAG+TGG + chr7_4:1089322-1089341 Msa1134560:intron 40.0%
! GAGTGGATTTGAAGCAGATA+AGG + chr7_4:1089339-1089358 Msa1134560:intron 40.0%
TCATTGGATGCAGAGAATTG+CGG + chr7_4:1089564-1089583 Msa1134560:intron 40.0%
TGGAACTTCATACTCCCAAT+CGG - chr7_4:1089958-1089977 None:intergenic 40.0%
! AATGATCGATCGTAGCTTGT+TGG + chr7_4:1090186-1090205 Msa1134560:CDS 40.0%
!! ATGATCGATCGTAGCTTGTT+GGG + chr7_4:1090187-1090206 Msa1134560:CDS 40.0%
AAGAGTCCTTCAGGATCAAA+AGG - chr7_4:1090521-1090540 None:intergenic 40.0%
TTGATCCTGAAGGACTCTTA+AGG + chr7_4:1090522-1090541 Msa1134560:intron 40.0%
GTAGGTGTTAATGTCGTGTT+TGG - chr7_4:1090867-1090886 None:intergenic 40.0%
GATACTACAAGACAAGAGGT+TGG - chr7_4:1091064-1091083 None:intergenic 40.0%
ACCTCTTGTCTTGTAGTATC+TGG + chr7_4:1091064-1091083 Msa1134560:intron 40.0%
GGCATTGCCTTGGATTTATT+TGG + chr7_4:1091085-1091104 Msa1134560:intron 40.0%
AGTTATACTTGTCTCACTGC+TGG + chr7_4:1091219-1091238 Msa1134560:CDS 40.0%
! GCATTGGATTTGTTCGAGAT+AGG + chr7_4:1091297-1091316 Msa1134560:intron 40.0%
!! TGCTTACAGGTTGATGTATG+TGG + chr7_4:1091588-1091607 Msa1134560:intron 40.0%
! GCATGACTTCGATTTTCCAA+TGG + chr7_4:1091619-1091638 Msa1134560:intron 40.0%
CCATGATCCATATATCTTGC+CGG + chr7_4:1091877-1091896 Msa1134560:intron 40.0%
TCACCTATGTCTTAATGAGG+AGG + chr7_4:1092131-1092150 Msa1134560:three_prime_UTR 40.0%
CAATGCAATATGGTAGGGTT+AGG - chr7_4:1084929-1084948 None:intergenic 40.0%
AGCAATCGTTGAGAAGTTTG+AGG - chr7_4:1085301-1085320 None:intergenic 40.0%
!! TCCTTCATTGGATTTTGGGT+TGG + chr7_4:1085522-1085541 Msa1134560:intron 40.0%
!!! CCTTCATTGGATTTTGGGTT+GGG + chr7_4:1085523-1085542 Msa1134560:intron 40.0%
!!! TTTTGGGTTGGGTTGTGTTT+TGG + chr7_4:1085534-1085553 Msa1134560:intron 40.0%
TCAGGTGCAAGTACATAGTT+AGG + chr7_4:1085688-1085707 Msa1134560:intron 40.0%
!! TGATTGACTTGAGAGTGTTG+AGG + chr7_4:1085896-1085915 Msa1134560:intron 40.0%
!! ACTTGAGAGTGTTGAGGTAA+AGG + chr7_4:1085902-1085921 Msa1134560:intron 40.0%
!! CTTGAGAGTGTTGAGGTAAA+GGG + chr7_4:1085903-1085922 Msa1134560:intron 40.0%
GGATGCTATACCCAATTTGT+TGG + chr7_4:1085954-1085973 Msa1134560:intron 40.0%
AGAGAATCCAAAGAGTTTGC+AGG + chr7_4:1085993-1086012 Msa1134560:intron 40.0%
CCGTCCACTAAAACAGAATA+TGG + chr7_4:1086490-1086509 Msa1134560:intron 40.0%
GGAAGAGGTGAAACTTAGAT+TGG - chr7_4:1087091-1087110 None:intergenic 40.0%
TACCTAATCTTGATGGGAAG+AGG - chr7_4:1087106-1087125 None:intergenic 40.0%
!! TTGTAGGCTTGTTAAGTTGG+GGG - chr7_4:1087144-1087163 None:intergenic 40.0%
GTGTCCTAATAACGTGTAGT+TGG + chr7_4:1087279-1087298 Msa1134560:intron 40.0%
TGATAAAGCAACATGGTGAG+TGG - chr7_4:1087336-1087355 None:intergenic 40.0%
AATCACATGTGTCCGTATGT+TGG - chr7_4:1087548-1087567 None:intergenic 40.0%
! GTGTCAGTTTTCATGTTGTC+TGG + chr7_4:1087611-1087630 Msa1134560:intron 40.0%
! TTTGGTGTGCCTAATGAAAC+TGG + chr7_4:1087748-1087767 Msa1134560:intron 40.0%
!! AATGTTTGGTGCTTCTCACA+TGG + chr7_4:1087806-1087825 Msa1134560:intron 40.0%
!! ATGTTTGGTGCTTCTCACAT+GGG + chr7_4:1087807-1087826 Msa1134560:intron 40.0%
TGGTCTGGTGTAATTTGGTT+AGG + chr7_4:1087977-1087996 Msa1134560:intron 40.0%
ATTCGTGTCTTTGCATGTAC+CGG - chr7_4:1088105-1088124 None:intergenic 40.0%
!! CTTACGCATAAGTGTTGAGT+TGG + chr7_4:1088254-1088273 Msa1134560:intron 40.0%
! ATGATATTGGTGGATGATGC+TGG + chr7_4:1088522-1088541 Msa1134560:CDS 40.0%
CTCAATCATTCTCCATGGAA+TGG + chr7_4:1088561-1088580 Msa1134560:CDS 40.0%
TGCACTAGCATTCACATACA+AGG + chr7_4:1088635-1088654 Msa1134560:CDS 40.0%
CTAGCATTCACATACAAGGT+TGG + chr7_4:1088639-1088658 Msa1134560:intron 40.0%
!! CAAAGTTGATGCGACTAGAA+AGG + chr7_4:1088853-1088872 Msa1134560:CDS 40.0%
TCGTAGATCGCGTAAATTGA+CGG - chr7_4:1089226-1089245 None:intergenic 40.0%
TAGTGATTTGACGTTTGGAG+TGG + chr7_4:1089322-1089341 Msa1134560:intron 40.0%
! GAGTGGATTTGAAGCAGATA+AGG + chr7_4:1089339-1089358 Msa1134560:intron 40.0%
TCATTGGATGCAGAGAATTG+CGG + chr7_4:1089564-1089583 Msa1134560:intron 40.0%
TGGAACTTCATACTCCCAAT+CGG - chr7_4:1089958-1089977 None:intergenic 40.0%
! AATGATCGATCGTAGCTTGT+TGG + chr7_4:1090186-1090205 Msa1134560:CDS 40.0%
!! ATGATCGATCGTAGCTTGTT+GGG + chr7_4:1090187-1090206 Msa1134560:CDS 40.0%
AAGAGTCCTTCAGGATCAAA+AGG - chr7_4:1090521-1090540 None:intergenic 40.0%
TTGATCCTGAAGGACTCTTA+AGG + chr7_4:1090522-1090541 Msa1134560:intron 40.0%
GTAGGTGTTAATGTCGTGTT+TGG - chr7_4:1090867-1090886 None:intergenic 40.0%
GATACTACAAGACAAGAGGT+TGG - chr7_4:1091064-1091083 None:intergenic 40.0%
ACCTCTTGTCTTGTAGTATC+TGG + chr7_4:1091064-1091083 Msa1134560:intron 40.0%
GGCATTGCCTTGGATTTATT+TGG + chr7_4:1091085-1091104 Msa1134560:intron 40.0%
AGTTATACTTGTCTCACTGC+TGG + chr7_4:1091219-1091238 Msa1134560:CDS 40.0%
! GCATTGGATTTGTTCGAGAT+AGG + chr7_4:1091297-1091316 Msa1134560:intron 40.0%
!! TGCTTACAGGTTGATGTATG+TGG + chr7_4:1091588-1091607 Msa1134560:intron 40.0%
! GCATGACTTCGATTTTCCAA+TGG + chr7_4:1091619-1091638 Msa1134560:intron 40.0%
CCATGATCCATATATCTTGC+CGG + chr7_4:1091877-1091896 Msa1134560:intron 40.0%
TCACCTATGTCTTAATGAGG+AGG + chr7_4:1092131-1092150 Msa1134560:three_prime_UTR 40.0%
! TTTTCGTGGTCTCACTGTTG+CGG + chr7_4:1085333-1085352 Msa1134560:CDS 45.0%
CCCAACCCAAAATCCAATGA+AGG - chr7_4:1085526-1085545 None:intergenic 45.0%
!!! GTTGGGTTGTGTTTTGGTGT+TGG + chr7_4:1085540-1085559 Msa1134560:intron 45.0%
! AAAGAGGCATGTAGCCGTAA+TGG - chr7_4:1086163-1086182 None:intergenic 45.0%
! GGTATCAACTAGGTTTTCGG+CGG - chr7_4:1086306-1086325 None:intergenic 45.0%
CACCTCTTCCCATCAAGATT+AGG + chr7_4:1087101-1087120 Msa1134560:intron 45.0%
TGTGCCTAATGAAACTGGCA+TGG + chr7_4:1087753-1087772 Msa1134560:intron 45.0%
! ATATTGGTGGATGATGCTGG+TGG + chr7_4:1088525-1088544 Msa1134560:CDS 45.0%
CATGGAGAATGATTGAGTGC+TGG - chr7_4:1088558-1088577 None:intergenic 45.0%
CAGCACTCAATCATTCTCCA+TGG + chr7_4:1088556-1088575 Msa1134560:CDS 45.0%
GTCGCATCAACTTTGCAAGA+TGG - chr7_4:1088848-1088867 None:intergenic 45.0%
! AGTTGATGCGACTAGAAAGG+CGG + chr7_4:1088856-1088875 Msa1134560:CDS 45.0%
! CGACTAGAAAGGCGGTTTTA+CGG + chr7_4:1088864-1088883 Msa1134560:CDS 45.0%
! GACTAGAAAGGCGGTTTTAC+GGG + chr7_4:1088865-1088884 Msa1134560:CDS 45.0%
GCGCTTAAGCTTCTTGCATT+AGG + chr7_4:1088887-1088906 Msa1134560:CDS 45.0%
GCTATAGCAGTGCAACATAC+CGG + chr7_4:1089188-1089207 Msa1134560:intron 45.0%
! TGCAATTTGTCGTTTGCAGG+AGG + chr7_4:1089284-1089303 Msa1134560:intron 45.0%
CGCGTTAGTGATTTGACGTT+TGG + chr7_4:1089317-1089336 Msa1134560:intron 45.0%
GGAACTTCATACTCCCAATC+GGG - chr7_4:1089957-1089976 None:intergenic 45.0%
!! GGTTCTGAAGAAGGTTCTGT+TGG - chr7_4:1089978-1089997 None:intergenic 45.0%
GATCATTCCAACGACATTGC+AGG - chr7_4:1090173-1090192 None:intergenic 45.0%
ACCGGAGACCAATATATGCA+CGG + chr7_4:1090224-1090243 Msa1134560:intron 45.0%
AAAGGAGCTTGACACCAAGA+AGG - chr7_4:1090503-1090522 None:intergenic 45.0%
! CAAGCTCCTTTTGATCCTGA+AGG + chr7_4:1090512-1090531 Msa1134560:intron 45.0%
AGTCACCTTAAGAGTCCTTC+AGG - chr7_4:1090530-1090549 None:intergenic 45.0%
GATGGCAATTGTTACCTGCT+TGG + chr7_4:1090752-1090771 Msa1134560:intron 45.0%
GCAATTGTTACCTGCTTGGT+TGG + chr7_4:1090756-1090775 Msa1134560:intron 45.0%
ATAATGCAAGCCAACCAAGC+AGG - chr7_4:1090769-1090788 None:intergenic 45.0%
!! TGCTTGGTTGGCTTGCATTA+TGG + chr7_4:1090768-1090787 Msa1134560:intron 45.0%
GCCAGATACTACAAGACAAG+AGG - chr7_4:1091068-1091087 None:intergenic 45.0%
TGTAGTATCTGGCATTGCCT+TGG + chr7_4:1091075-1091094 Msa1134560:intron 45.0%
ATGCATGCATGCCTATCCAT+TGG - chr7_4:1091638-1091657 None:intergenic 45.0%
GGTTATTTGAGCGGTTCAAG+CGG + chr7_4:1091839-1091858 Msa1134560:intron 45.0%
CCGGCAAGATATATGGATCA+TGG - chr7_4:1091880-1091899 None:intergenic 45.0%
TTGGAGTTGGATCATGAAGG+AGG + chr7_4:1092046-1092065 Msa1134560:exon 45.0%
GGAGGAAGCAAATATGCTAG+TGG + chr7_4:1092064-1092083 Msa1134560:three_prime_UTR 45.0%
GGTCCTCCTCATTAAGACAT+AGG - chr7_4:1092137-1092156 None:intergenic 45.0%
! TTTTCGTGGTCTCACTGTTG+CGG + chr7_4:1085333-1085352 Msa1134560:CDS 45.0%
CCCAACCCAAAATCCAATGA+AGG - chr7_4:1085526-1085545 None:intergenic 45.0%
!!! GTTGGGTTGTGTTTTGGTGT+TGG + chr7_4:1085540-1085559 Msa1134560:intron 45.0%
! AAAGAGGCATGTAGCCGTAA+TGG - chr7_4:1086163-1086182 None:intergenic 45.0%
! GGTATCAACTAGGTTTTCGG+CGG - chr7_4:1086306-1086325 None:intergenic 45.0%
CACCTCTTCCCATCAAGATT+AGG + chr7_4:1087101-1087120 Msa1134560:intron 45.0%
TGTGCCTAATGAAACTGGCA+TGG + chr7_4:1087753-1087772 Msa1134560:intron 45.0%
! ATATTGGTGGATGATGCTGG+TGG + chr7_4:1088525-1088544 Msa1134560:CDS 45.0%
CATGGAGAATGATTGAGTGC+TGG - chr7_4:1088558-1088577 None:intergenic 45.0%
CAGCACTCAATCATTCTCCA+TGG + chr7_4:1088556-1088575 Msa1134560:CDS 45.0%
GTCGCATCAACTTTGCAAGA+TGG - chr7_4:1088848-1088867 None:intergenic 45.0%
! AGTTGATGCGACTAGAAAGG+CGG + chr7_4:1088856-1088875 Msa1134560:CDS 45.0%
! CGACTAGAAAGGCGGTTTTA+CGG + chr7_4:1088864-1088883 Msa1134560:CDS 45.0%
! GACTAGAAAGGCGGTTTTAC+GGG + chr7_4:1088865-1088884 Msa1134560:CDS 45.0%
GCGCTTAAGCTTCTTGCATT+AGG + chr7_4:1088887-1088906 Msa1134560:CDS 45.0%
GCTATAGCAGTGCAACATAC+CGG + chr7_4:1089188-1089207 Msa1134560:intron 45.0%
! TGCAATTTGTCGTTTGCAGG+AGG + chr7_4:1089284-1089303 Msa1134560:intron 45.0%
CGCGTTAGTGATTTGACGTT+TGG + chr7_4:1089317-1089336 Msa1134560:intron 45.0%
GGAACTTCATACTCCCAATC+GGG - chr7_4:1089957-1089976 None:intergenic 45.0%
!! GGTTCTGAAGAAGGTTCTGT+TGG - chr7_4:1089978-1089997 None:intergenic 45.0%
GATCATTCCAACGACATTGC+AGG - chr7_4:1090173-1090192 None:intergenic 45.0%
ACCGGAGACCAATATATGCA+CGG + chr7_4:1090224-1090243 Msa1134560:intron 45.0%
AAAGGAGCTTGACACCAAGA+AGG - chr7_4:1090503-1090522 None:intergenic 45.0%
! CAAGCTCCTTTTGATCCTGA+AGG + chr7_4:1090512-1090531 Msa1134560:intron 45.0%
AGTCACCTTAAGAGTCCTTC+AGG - chr7_4:1090530-1090549 None:intergenic 45.0%
GATGGCAATTGTTACCTGCT+TGG + chr7_4:1090752-1090771 Msa1134560:intron 45.0%
GCAATTGTTACCTGCTTGGT+TGG + chr7_4:1090756-1090775 Msa1134560:intron 45.0%
ATAATGCAAGCCAACCAAGC+AGG - chr7_4:1090769-1090788 None:intergenic 45.0%
!! TGCTTGGTTGGCTTGCATTA+TGG + chr7_4:1090768-1090787 Msa1134560:intron 45.0%
GCCAGATACTACAAGACAAG+AGG - chr7_4:1091068-1091087 None:intergenic 45.0%
TGTAGTATCTGGCATTGCCT+TGG + chr7_4:1091075-1091094 Msa1134560:intron 45.0%
ATGCATGCATGCCTATCCAT+TGG - chr7_4:1091638-1091657 None:intergenic 45.0%
GGTTATTTGAGCGGTTCAAG+CGG + chr7_4:1091839-1091858 Msa1134560:intron 45.0%
CCGGCAAGATATATGGATCA+TGG - chr7_4:1091880-1091899 None:intergenic 45.0%
TTGGAGTTGGATCATGAAGG+AGG + chr7_4:1092046-1092065 Msa1134560:exon 45.0%
GGAGGAAGCAAATATGCTAG+TGG + chr7_4:1092064-1092083 Msa1134560:three_prime_UTR 45.0%
GGTCCTCCTCATTAAGACAT+AGG - chr7_4:1092137-1092156 None:intergenic 45.0%
!! ACTATAAAATAAAAAAATTT+AGG - chr7_4:1085779-1085798 None:intergenic 5.0%
!!! TTTTTTTATTTTATAGTTAT+TGG + chr7_4:1085782-1085801 Msa1134560:intron 5.0%
!!! TTTTTTATTTTATAGTTATT+GGG + chr7_4:1085783-1085802 Msa1134560:intron 5.0%
!!! ATTTTTTAATATTTTCATTT+AGG + chr7_4:1086331-1086350 Msa1134560:intron 5.0%
!!! ATTTTGATAATATTTTTTTT+AGG + chr7_4:1086583-1086602 Msa1134560:intron 5.0%
!!! TTGAAATATATTTTTATTTT+TGG + chr7_4:1087494-1087513 Msa1134560:intron 5.0%
!! ACTATAAAATAAAAAAATTT+AGG - chr7_4:1085779-1085798 None:intergenic 5.0%
!!! TTTTTTTATTTTATAGTTAT+TGG + chr7_4:1085782-1085801 Msa1134560:intron 5.0%
!!! TTTTTTATTTTATAGTTATT+GGG + chr7_4:1085783-1085802 Msa1134560:intron 5.0%
!!! ATTTTTTAATATTTTCATTT+AGG + chr7_4:1086331-1086350 Msa1134560:intron 5.0%
!!! ATTTTGATAATATTTTTTTT+AGG + chr7_4:1086583-1086602 Msa1134560:intron 5.0%
!!! TTGAAATATATTTTTATTTT+TGG + chr7_4:1087494-1087513 Msa1134560:intron 5.0%
!!! GGGTTGTGTTTTGGTGTTGG+TGG + chr7_4:1085543-1085562 Msa1134560:intron 50.0%
GTCGAGTTTCGACGAGTCAT+CGG - chr7_4:1085753-1085772 None:intergenic 50.0%
CGTGCAACCTGCAAACTCTT+TGG - chr7_4:1086003-1086022 None:intergenic 50.0%
!! GCGTTGAAGAGGAGTATCGA+GGG - chr7_4:1087027-1087046 None:intergenic 50.0%
AAGCAACATGGTGAGTGGTG+AGG - chr7_4:1087331-1087350 None:intergenic 50.0%
! GTCTTTGCATGTACCGGTGT+CGG - chr7_4:1088099-1088118 None:intergenic 50.0%
!! GTTGAGTTGGTGTCAGACAC+TGG + chr7_4:1088267-1088286 Msa1134560:intron 50.0%
!! AAACTCCTTTGGTGCCTCCT+AGG + chr7_4:1088357-1088376 Msa1134560:intron 50.0%
!! ATTTGCCTAGGAGGCACCAA+AGG - chr7_4:1088365-1088384 None:intergenic 50.0%
CGGCGCTATAACGTGCATAT+CGG + chr7_4:1089091-1089110 Msa1134560:intron 50.0%
ATGGGATGTACGTTCCCGAT+TGG + chr7_4:1089940-1089959 Msa1134560:CDS 50.0%
TGGGATGTACGTTCCCGATT+GGG + chr7_4:1089941-1089960 Msa1134560:CDS 50.0%
ATTCCAACGACATTGCAGGC+TGG - chr7_4:1090169-1090188 None:intergenic 50.0%
! CCCGTGCATATATTGGTCTC+CGG - chr7_4:1090228-1090247 None:intergenic 50.0%
CCGGAGACCAATATATGCAC+GGG + chr7_4:1090225-1090244 Msa1134560:intron 50.0%
!! TGACACCAAGAAGGAGCATC+AGG - chr7_4:1090494-1090513 None:intergenic 50.0%
! TGAAAGCGTGTCTGGTGTGT+AGG - chr7_4:1090885-1090904 None:intergenic 50.0%
! TGAGGAGGACCAAGCATTGT+TGG + chr7_4:1092146-1092165 Msa1134560:three_prime_UTR 50.0%
!!! GGGTTGTGTTTTGGTGTTGG+TGG + chr7_4:1085543-1085562 Msa1134560:intron 50.0%
GTCGAGTTTCGACGAGTCAT+CGG - chr7_4:1085753-1085772 None:intergenic 50.0%
CGTGCAACCTGCAAACTCTT+TGG - chr7_4:1086003-1086022 None:intergenic 50.0%
!! GCGTTGAAGAGGAGTATCGA+GGG - chr7_4:1087027-1087046 None:intergenic 50.0%
AAGCAACATGGTGAGTGGTG+AGG - chr7_4:1087331-1087350 None:intergenic 50.0%
! GTCTTTGCATGTACCGGTGT+CGG - chr7_4:1088099-1088118 None:intergenic 50.0%
!! GTTGAGTTGGTGTCAGACAC+TGG + chr7_4:1088267-1088286 Msa1134560:intron 50.0%
!! AAACTCCTTTGGTGCCTCCT+AGG + chr7_4:1088357-1088376 Msa1134560:intron 50.0%
!! ATTTGCCTAGGAGGCACCAA+AGG - chr7_4:1088365-1088384 None:intergenic 50.0%
CGGCGCTATAACGTGCATAT+CGG + chr7_4:1089091-1089110 Msa1134560:intron 50.0%
ATGGGATGTACGTTCCCGAT+TGG + chr7_4:1089940-1089959 Msa1134560:CDS 50.0%
TGGGATGTACGTTCCCGATT+GGG + chr7_4:1089941-1089960 Msa1134560:CDS 50.0%
ATTCCAACGACATTGCAGGC+TGG - chr7_4:1090169-1090188 None:intergenic 50.0%
! CCCGTGCATATATTGGTCTC+CGG - chr7_4:1090228-1090247 None:intergenic 50.0%
CCGGAGACCAATATATGCAC+GGG + chr7_4:1090225-1090244 Msa1134560:intron 50.0%
!! TGACACCAAGAAGGAGCATC+AGG - chr7_4:1090494-1090513 None:intergenic 50.0%
! TGAAAGCGTGTCTGGTGTGT+AGG - chr7_4:1090885-1090904 None:intergenic 50.0%
! TGAGGAGGACCAAGCATTGT+TGG + chr7_4:1092146-1092165 Msa1134560:three_prime_UTR 50.0%
!! CGCGTTGAAGAGGAGTATCG+AGG - chr7_4:1087028-1087047 None:intergenic 55.0%
CTCACACACACGCGTTGAAG+AGG - chr7_4:1087038-1087057 None:intergenic 55.0%
CATGGTGAGTGGTGAGGAGT+CGG - chr7_4:1087325-1087344 None:intergenic 55.0%
!! ACACTATGAGGCACCGACAC+CGG + chr7_4:1088083-1088102 Msa1134560:intron 55.0%
TGTGGAGTAAGAGGCGACAC+TGG + chr7_4:1090142-1090161 Msa1134560:CDS 55.0%
ACAGGCGCCCGTGCATATAT+TGG - chr7_4:1090235-1090254 None:intergenic 55.0%
GGAGGCAATGGTCCATAGTC+AGG - chr7_4:1090473-1090492 None:intergenic 55.0%
!! GAAGGAGCATCAGGAGGCAA+TGG - chr7_4:1090485-1090504 None:intergenic 55.0%
TGCCTCCTGATGCTCCTTCT+TGG + chr7_4:1090486-1090505 Msa1134560:intron 55.0%
!! CACCAAGAAGGAGCATCAGG+AGG - chr7_4:1090491-1090510 None:intergenic 55.0%
GCTGCTGGCATTCTCTTTGC+TGG + chr7_4:1091243-1091262 Msa1134560:CDS 55.0%
! GGAGGACCAAGCATTGTTGG+TGG + chr7_4:1092149-1092168 Msa1134560:three_prime_UTR 55.0%
!! CGCGTTGAAGAGGAGTATCG+AGG - chr7_4:1087028-1087047 None:intergenic 55.0%
CTCACACACACGCGTTGAAG+AGG - chr7_4:1087038-1087057 None:intergenic 55.0%
CATGGTGAGTGGTGAGGAGT+CGG - chr7_4:1087325-1087344 None:intergenic 55.0%
!! ACACTATGAGGCACCGACAC+CGG + chr7_4:1088083-1088102 Msa1134560:intron 55.0%
TGTGGAGTAAGAGGCGACAC+TGG + chr7_4:1090142-1090161 Msa1134560:CDS 55.0%
ACAGGCGCCCGTGCATATAT+TGG - chr7_4:1090235-1090254 None:intergenic 55.0%
GGAGGCAATGGTCCATAGTC+AGG - chr7_4:1090473-1090492 None:intergenic 55.0%
!! GAAGGAGCATCAGGAGGCAA+TGG - chr7_4:1090485-1090504 None:intergenic 55.0%
TGCCTCCTGATGCTCCTTCT+TGG + chr7_4:1090486-1090505 Msa1134560:intron 55.0%
!! CACCAAGAAGGAGCATCAGG+AGG - chr7_4:1090491-1090510 None:intergenic 55.0%
GCTGCTGGCATTCTCTTTGC+TGG + chr7_4:1091243-1091262 Msa1134560:CDS 55.0%
! GGAGGACCAAGCATTGTTGG+TGG + chr7_4:1092149-1092168 Msa1134560:three_prime_UTR 55.0%
! GAGTGGTGAGGAGTCGGTTC+AGG - chr7_4:1087319-1087338 None:intergenic 60.0%
GGACCAGCCTGCAATGTCGT+TGG + chr7_4:1090163-1090182 Msa1134560:CDS 60.0%
!! TGTCTCACTGCTGGTGCTGC+TGG + chr7_4:1091228-1091247 Msa1134560:CDS 60.0%
! GAGTGGTGAGGAGTCGGTTC+AGG - chr7_4:1087319-1087338 None:intergenic 60.0%
GGACCAGCCTGCAATGTCGT+TGG + chr7_4:1090163-1090182 Msa1134560:CDS 60.0%
!! TGTCTCACTGCTGGTGCTGC+TGG + chr7_4:1091228-1091247 Msa1134560:CDS 60.0%
Chromosome Type Strat End Strand Name
chr7_4 gene 1084821 1092502 1084821 ID=Msa1134560;Name=Msa1134560
chr7_4 mRNA 1084821 1092502 1084821 ID=Msa1134560-mRNA-1;Parent=Msa1134560;Name=Msa1134560-mRNA-1;_AED=0.21;_eAED=0.21;_QI=158|0.5|0.72|1|0.6|0.63|11|440|292
chr7_4 exon 1084821 1084894 1084821 ID=Msa1134560-mRNA-1:exon:386;Parent=Msa1134560-mRNA-1
chr7_4 exon 1084916 1084957 1084916 ID=Msa1134560-mRNA-1:exon:387;Parent=Msa1134560-mRNA-1
chr7_4 exon 1085061 1085354 1085061 ID=Msa1134560-mRNA-1:exon:388;Parent=Msa1134560-mRNA-1
chr7_4 exon 1088519 1088656 1088519 ID=Msa1134560-mRNA-1:exon:389;Parent=Msa1134560-mRNA-1
chr7_4 exon 1088842 1088923 1088842 ID=Msa1134560-mRNA-1:exon:390;Parent=Msa1134560-mRNA-1
chr7_4 exon 1089353 1089360 1089353 ID=Msa1134560-mRNA-1:exon:391;Parent=Msa1134560-mRNA-1
chr7_4 exon 1089577 1089668 1089577 ID=Msa1134560-mRNA-1:exon:392;Parent=Msa1134560-mRNA-1
chr7_4 exon 1089896 1090010 1089896 ID=Msa1134560-mRNA-1:exon:393;Parent=Msa1134560-mRNA-1
chr7_4 exon 1090136 1090208 1090136 ID=Msa1134560-mRNA-1:exon:394;Parent=Msa1134560-mRNA-1
chr7_4 exon 1091187 1091278 1091187 ID=Msa1134560-mRNA-1:exon:395;Parent=Msa1134560-mRNA-1
chr7_4 exon 1092036 1092502 1092036 ID=Msa1134560-mRNA-1:exon:396;Parent=Msa1134560-mRNA-1
chr7_4 five_prime_UTR 1084821 1084894 1084821 ID=Msa1134560-mRNA-1:five_prime_utr;Parent=Msa1134560-mRNA-1
chr7_4 five_prime_UTR 1084916 1084957 1084916 ID=Msa1134560-mRNA-1:five_prime_utr;Parent=Msa1134560-mRNA-1
chr7_4 five_prime_UTR 1085061 1085102 1085061 ID=Msa1134560-mRNA-1:five_prime_utr;Parent=Msa1134560-mRNA-1
chr7_4 CDS 1085103 1085354 1085103 ID=Msa1134560-mRNA-1:cds;Parent=Msa1134560-mRNA-1
chr7_4 CDS 1088519 1088656 1088519 ID=Msa1134560-mRNA-1:cds;Parent=Msa1134560-mRNA-1
chr7_4 CDS 1088842 1088923 1088842 ID=Msa1134560-mRNA-1:cds;Parent=Msa1134560-mRNA-1
chr7_4 CDS 1089353 1089360 1089353 ID=Msa1134560-mRNA-1:cds;Parent=Msa1134560-mRNA-1
chr7_4 CDS 1089577 1089668 1089577 ID=Msa1134560-mRNA-1:cds;Parent=Msa1134560-mRNA-1
chr7_4 CDS 1089896 1090010 1089896 ID=Msa1134560-mRNA-1:cds;Parent=Msa1134560-mRNA-1
chr7_4 CDS 1090136 1090208 1090136 ID=Msa1134560-mRNA-1:cds;Parent=Msa1134560-mRNA-1
chr7_4 CDS 1091187 1091278 1091187 ID=Msa1134560-mRNA-1:cds;Parent=Msa1134560-mRNA-1
chr7_4 CDS 1092036 1092062 1092036 ID=Msa1134560-mRNA-1:cds;Parent=Msa1134560-mRNA-1
chr7_4 three_prime_UTR 1092063 1092502 1092063 ID=Msa1134560-mRNA-1:three_prime_utr;Parent=Msa1134560-mRNA-1
Gene Sequence

>Msa1134560

ATGAAGAAATACGAAGCAATAAAGAGTTTTGAAGAGAATGATGAAGATTTGGAAATGGGTCATGAACAAGAACAACAGATCCATGATTCAGCTACAAAGATTATTAATAATGAAGAACTTTCTGCAATGATTTCTTCTTCTTCTTCATCTTCATCAAGAAAACAAGAACAAGAACATCAACAACAACAACAACAACCTCAAACTTCTCAACGATTGCTTTCACTTGATGTTTTTCGTGGTCTCACTGTTGCGCTTATGATATTGGTGGATGATGCTGGTGGACTTATTCCAGCACTCAATCATTCTCCATGGAATGGTTTAACAATAGCAGACTTTGTTATGCCGTTTTTTCTTTTTATTGTTGGCGTTGCACTAGCATTCACATACAAGAAACCATCTTGCAAAGTTGATGCGACTAGAAAGGCGGTTTTACGGGCGCTTAAGCTTCTTGCATTAGGCATTTTTCTTCAAGCAGATAAGAGAATTGCGGTAGCATATTTGATTACAGCTCTCTGTGAAATTTGGCTCAAGCGTGAAGATATCGTTAATTCTGGATCATCCCTTTTGAGAAAGGCTTTGGCTTTATTTCTATCTGTCATTTATCTTTGCTTGCTGTATGGGATGTACGTTCCCGATTGGGAGTATGAAGTTCCAACAGAACCTTCTTCAGAACCTATGAAATTTTCTGTTAAATGTGGAGTAAGAGGCGACACTGGACCAGCCTGCAATGTCGTTGGAATGATCGATCGTAGCTTGTTGGGAATGCATGTAAATAAAGTTCTCTACTCATTTAGTTATACTTGTCTCACTGCTGGTGCTGCTGGCATTCTCTTTGCTGGAATATATTTGATGCTAAAGTTAATTGGAGTTGGATCATGA

Protein sequence

>Msa1134560

MKKYEAIKSFEENDEDLEMGHEQEQQIHDSATKIINNEELSAMISSSSSSSSRKQEQEHQQQQQQPQTSQRLLSLDVFRGLTVALMILVDDAGGLIPALNHSPWNGLTIADFVMPFFLFIVGVALAFTYKKPSCKVDATRKAVLRALKLLALGIFLQADKRIAVAYLITALCEIWLKREDIVNSGSSLLRKALALFLSVIYLCLLYGMYVPDWEYEVPTEPSSEPMKFSVKCGVRGDTGPACNVVGMIDRSLLGMHVNKVLYSFSYTCLTAGAAGILFAGIYLMLKLIGVGS*