AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar zhongmu-4 / Msa1204590

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa1204590 MtrunA17_Chr4g0053721 97.022 638 12 1 1 631 1 638 0.0 1292
Msa1204590 MtrunA17_Chr5g0401601 74.491 639 147 5 9 631 9 647 0.0 989
Msa1204590 MtrunA17_Chr2g0320621 32.976 373 213 12 79 424 76 438 8.31e-49 177
Msa1204590 MtrunA17_Chr1g0179751 32.447 376 212 12 79 424 107 470 1.21e-47 175
Msa1204590 MtrunA17_Chr7g0265331 31.830 377 221 12 74 424 75 441 1.49e-46 171
Msa1204590 MtrunA17_Chr4g0027681 30.831 373 220 12 79 424 76 437 3.22e-45 167
Msa1204590 MtrunA17_Chr3g0130931 30.978 368 217 14 78 426 102 451 2.49e-38 147
Msa1204590 MtrunA17_Chr1g0189381 30.607 379 214 16 79 424 68 430 6.59e-34 135
Msa1204590 MtrunA17_Chr6g0484731 29.333 375 225 12 78 424 189 551 2.09e-32 132
Msa1204590 MtrunA17_Chr7g0221681 27.968 379 225 14 79 424 71 434 8.44e-31 126
Msa1204590 MtrunA17_Chr2g0291201 26.281 449 258 16 27 423 24 451 1.48e-30 125
Msa1204590 MtrunA17_Chr8g0384731 28.261 368 226 14 79 423 72 424 1.71e-30 124
Msa1204590 MtrunA17_Chr7g0249451 29.288 379 220 16 79 425 70 432 1.90e-30 125
Msa1204590 MtrunA17_Chr1g0159791 27.865 384 240 17 66 426 43 412 1.12e-29 122
Msa1204590 MtrunA17_Chr5g0419291 26.190 462 271 21 2 426 3 431 1.85e-29 121
Msa1204590 MtrunA17_Chr3g0130741 27.419 372 239 13 71 423 75 434 2.93e-28 118
Msa1204590 MtrunA17_Chr8g0352661 24.889 450 291 17 5 426 9 439 2.71e-27 115
Msa1204590 MtrunA17_Chr5g0435871 26.613 372 227 15 79 426 88 437 3.43e-26 112
Msa1204590 MtrunA17_Chr8g0371371 28.244 393 244 16 87 458 119 494 6.31e-26 112
Msa1204590 MtrunA17_Chr5g0435971 26.613 372 227 15 79 426 85 434 1.01e-25 110
Msa1204590 MtrunA17_Chr5g0442921 25.849 383 239 13 76 426 187 556 2.69e-25 110
Msa1204590 MtrunA17_Chr1g0212321 27.298 359 232 11 78 423 144 486 2.77e-25 109
Msa1204590 MtrunA17_Chr8g0386441 26.139 417 256 18 37 426 41 432 3.45e-25 108
Msa1204590 MtrunA17_Chr2g0310821 28.650 363 218 17 79 425 107 444 3.65e-25 108
Msa1204590 MtrunA17_Chr5g0395911 26.359 368 232 14 79 425 66 415 8.10e-25 107
Msa1204590 MtrunA17_Chr2g0310801 29.301 372 213 19 79 425 89 435 1.45e-24 107
Msa1204590 MtrunA17_Chr2g0310831 26.810 373 226 15 78 425 92 442 1.77e-24 106
Msa1204590 MtrunA17_Chr3g0095891 25.594 379 240 11 78 426 95 461 2.79e-24 106
Msa1204590 MtrunA17_Chr2g0307991 26.954 371 223 16 81 426 60 407 6.40e-24 104
Msa1204590 MtrunA17_Chr6g0484901 26.197 355 230 12 81 423 157 491 1.17e-23 104
Msa1204590 MtrunA17_Chr8g0352671 25.055 455 283 21 5 426 10 439 1.78e-23 103
Msa1204590 MtrunA17_Chr4g0001991 28.969 359 217 15 87 424 177 518 2.71e-23 103
Msa1204590 MtrunA17_Chr3g0099891 26.812 414 257 16 27 423 70 454 3.97e-23 102
Msa1204590 MtrunA17_Chr2g0307461 26.131 398 210 18 63 410 54 417 6.78e-23 102
Msa1204590 MtrunA17_Chr3g0078321 26.146 371 239 17 79 426 57 415 7.29e-23 101
Msa1204590 MtrunA17_Chr3g0087851 26.287 369 232 16 80 426 89 439 1.43e-22 100
Msa1204590 MtrunA17_Chr5g0415951 26.738 374 219 16 81 425 89 436 1.48e-22 100
Msa1204590 MtrunA17_Chr5g0395931 26.146 371 230 14 79 425 87 437 1.84e-22 100
Msa1204590 MtrunA17_Chr1g0165201 25.549 364 233 13 78 423 126 469 2.06e-22 100
Msa1204590 MtrunA17_Chr2g0308001 26.154 390 229 16 81 437 59 422 3.36e-22 100
Msa1204590 MtrunA17_Chr8g0390761 26.453 344 221 13 81 410 117 442 4.14e-22 99.8
Msa1204590 MtrunA17_Chr1g0210201 29.201 363 216 15 78 423 129 467 6.18e-22 99.4
Msa1204590 MtrunA17_Chr2g0311451 27.660 376 218 16 79 425 87 437 1.27e-21 98.2
Msa1204590 MtrunA17_Chr7g0239001 24.550 444 277 19 25 430 9 432 1.40e-21 97.8
Msa1204590 MtrunA17_Chr8g0371351 24.810 395 247 17 80 445 101 474 1.72e-21 98.6
Msa1204590 MtrunA17_Chr3g0110191 25.722 381 214 15 85 426 91 441 6.66e-21 95.9
Msa1204590 MtrunA17_Chr6g0486981 25.337 371 232 13 81 426 89 439 2.60e-20 94.0
Msa1204590 MtrunA17_Chr2g0333991 26.954 371 221 16 79 422 87 434 8.73e-20 92.4
Msa1204590 MtrunA17_Chr2g0309561 22.899 476 271 15 23 423 54 508 1.17e-19 92.8
Msa1204590 MtrunA17_Chr5g0434411 25.066 379 227 14 85 428 86 442 1.51e-19 91.7
Msa1204590 MtrunA17_Chr3g0099901 26.923 364 236 13 75 423 137 485 2.90e-19 91.3
Msa1204590 MtrunA17_Chr7g0275731 24.390 369 233 14 78 423 139 484 8.34e-19 89.7
Msa1204590 MtrunA17_Chr4g0061641 28.150 373 218 19 77 426 54 399 1.53e-18 88.2
Msa1204590 MtrunA17_Chr5g0425141 22.850 407 263 18 87 461 108 495 2.74e-18 88.6
Msa1204590 MtrunA17_Chr5g0434441 24.734 376 228 13 85 425 73 428 3.60e-18 87.4
Msa1204590 MtrunA17_Chr7g0267171 24.882 422 237 19 59 425 71 467 1.90e-17 85.5
Msa1204590 MtrunA17_Chr4g0023351 28.507 221 134 7 81 282 59 274 2.09e-17 83.2
Msa1204590 MtrunA17_Chr5g0395871 26.216 370 227 15 78 424 79 425 3.40e-17 84.3
Msa1204590 MtrunA17_Chr5g0406001 23.543 446 272 19 77 481 108 525 7.43e-17 84.0
Msa1204590 MtrunA17_Chr6g0457401 24.668 377 252 13 65 425 78 438 7.57e-17 83.6
Msa1204590 MtrunA17_Chr3g0112051 22.581 465 265 20 1 429 10 415 1.00e-16 83.2
Msa1204590 MtrunA17_Chr6g0487471 24.029 412 274 16 37 425 41 436 1.29e-16 82.8
Msa1204590 MtrunA17_Chr2g0312941 24.211 380 235 14 77 418 84 448 1.80e-16 82.4
Msa1204590 MtrunA17_Chr1g0164401 24.100 361 231 17 81 423 93 428 1.07e-15 79.7
Msa1204590 MtrunA17_Chr2g0287831 26.111 360 238 12 81 418 40 393 1.77e-15 79.0
Msa1204590 MtrunA17_Chr8g0353261 24.227 388 254 16 53 423 69 433 5.17e-15 77.8
Msa1204590 MtrunA17_Chr2g0287811 23.116 398 226 16 77 418 36 409 9.79e-12 67.4
Msa1204590 MtrunA17_Chr5g0395891 24.839 310 197 12 133 425 24 314 1.17e-11 66.2
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa1204590 AT5G43100.1 59.667 600 234 5 34 631 31 624 0.0 758
Msa1204590 AT3G50050.1 57.504 633 243 8 10 631 15 632 0.0 719
Msa1204590 AT5G43100.2 65.487 452 149 4 34 484 31 476 0.0 612
Msa1204590 AT5G22850.1 33.422 377 216 11 74 424 74 441 4.96e-54 192
Msa1204590 AT1G08210.1 33.422 377 213 12 74 424 77 441 4.16e-49 179
Msa1204590 AT1G08210.3 32.626 377 216 11 74 424 125 489 5.86e-49 179
Msa1204590 AT1G08210.4 32.626 377 216 11 74 424 111 475 6.38e-49 179
Msa1204590 AT2G36670.2 32.808 381 211 14 74 424 93 458 1.99e-47 174
Msa1204590 AT2G36670.4 32.632 380 211 14 75 424 28 392 2.67e-47 172
Msa1204590 AT2G36670.3 32.632 380 211 14 75 424 28 392 2.67e-47 172
Msa1204590 AT2G36670.1 32.620 374 207 14 81 424 105 463 1.72e-46 172
Msa1204590 AT1G08210.2 31.436 404 212 13 74 424 77 468 1.38e-44 167
Msa1204590 AT5G36260.1 31.863 408 221 18 55 424 46 434 2.66e-39 151
Msa1204590 AT3G25700.1 29.252 441 262 18 23 424 21 450 2.68e-37 145
Msa1204590 AT1G05840.1 29.319 382 214 15 79 424 78 439 1.11e-36 144
Msa1204590 AT2G03200.1 30.214 374 220 13 78 426 104 461 1.47e-36 143
Msa1204590 AT3G02740.1 29.867 375 217 15 79 424 83 440 1.44e-34 137
Msa1204590 AT3G02740.2 29.759 373 216 15 81 424 10 365 9.74e-34 134
Msa1204590 AT2G28220.1 27.982 436 264 17 5 427 3 401 6.83e-33 131
Msa1204590 AT2G28010.1 26.799 403 258 12 38 428 19 396 1.16e-32 130
Msa1204590 AT4G33490.2 28.058 417 265 15 34 426 9 414 2.01e-31 127
Msa1204590 AT3G42550.1 26.682 431 233 14 31 431 20 397 8.87e-31 125
Msa1204590 AT1G65240.1 28.822 399 232 18 60 424 47 427 1.06e-30 126
Msa1204590 AT2G28040.2 27.229 415 260 16 24 427 2 385 2.64e-30 123
Msa1204590 AT2G28040.1 26.895 409 257 16 35 428 14 395 8.59e-30 122
Msa1204590 AT1G77480.2 27.561 410 244 15 55 426 28 422 1.01e-28 119
Msa1204590 AT2G28225.1 28.611 360 221 12 81 428 67 402 1.33e-28 119
Msa1204590 AT4G30030.1 26.685 371 215 14 81 423 78 419 2.19e-28 118
Msa1204590 AT1G77480.1 27.561 410 244 15 55 426 28 422 2.87e-28 119
Msa1204590 AT5G10770.1 28.311 438 262 19 14 424 62 474 5.43e-27 115
Msa1204590 AT5G10080.1 25.432 405 250 14 87 457 106 492 2.37e-26 114
Msa1204590 AT2G28030.1 26.374 364 236 11 73 428 53 392 2.46e-26 112
Msa1204590 AT3G51350.1 24.933 373 242 14 76 425 97 454 6.80e-26 112
Msa1204590 AT4G33490.1 28.061 392 247 15 34 401 6 386 9.12e-26 110
Msa1204590 AT2G17760.1 28.261 368 205 18 87 423 110 449 7.20e-25 109
Msa1204590 AT3G18490.1 26.648 364 227 16 78 423 159 500 1.15e-24 108
Msa1204590 AT3G59080.1 26.031 388 233 15 76 426 165 535 1.52e-24 108
Msa1204590 AT1G64830.1 26.287 369 230 13 79 426 84 431 1.56e-24 107
Msa1204590 AT3G12700.1 24.831 443 299 13 5 423 28 460 2.80e-24 107
Msa1204590 AT1G44130.1 25.745 369 240 14 79 426 47 402 4.64e-24 105
Msa1204590 AT2G23945.1 26.772 381 219 18 81 426 96 451 9.00e-24 105
Msa1204590 AT3G54400.1 28.532 361 216 18 81 423 88 424 1.91e-23 103
Msa1204590 AT3G51360.9 24.938 401 253 12 87 459 105 485 3.31e-23 103
Msa1204590 AT2G42980.1 25.130 386 241 11 76 426 155 527 3.57e-23 103
Msa1204590 AT3G51360.7 24.938 401 253 12 87 459 11 391 3.70e-23 102
Msa1204590 AT1G01300.1 25.337 371 229 14 78 424 139 485 5.02e-23 103
Msa1204590 AT3G51360.1 24.938 401 253 12 87 459 95 475 8.20e-23 102
Msa1204590 AT4G30040.1 25.405 370 217 15 81 418 85 427 1.49e-22 101
Msa1204590 AT1G25510.1 26.741 359 230 11 78 423 145 483 4.32e-22 100
Msa1204590 AT5G02190.1 25.815 399 219 19 88 434 80 453 6.80e-22 99.8
Msa1204590 AT5G33340.1 25.693 397 248 15 53 426 65 437 1.20e-21 98.6
Msa1204590 AT3G51330.1 25.201 373 242 14 76 425 97 455 1.42e-21 99.4
Msa1204590 AT3G51330.3 25.067 371 241 14 76 423 97 453 2.92e-21 97.8
Msa1204590 AT1G09750.1 26.685 371 222 18 79 423 102 448 4.71e-21 97.1
Msa1204590 AT2G35615.1 27.586 406 241 17 54 424 57 444 1.55e-20 95.5
Msa1204590 AT2G39710.1 25.792 442 247 22 26 418 16 425 3.21e-20 94.4
Msa1204590 AT3G20015.1 26.796 362 230 13 78 423 128 470 3.58e-20 94.4
Msa1204590 AT5G10760.1 25.833 360 233 13 76 423 127 464 9.67e-20 93.2
Msa1204590 AT3G59080.2 25.464 377 213 14 76 426 165 499 1.29e-19 92.8
Msa1204590 AT4G35880.1 25.876 371 232 19 80 428 107 456 1.77e-19 92.8
Msa1204590 AT3G61820.1 27.913 369 226 16 78 423 132 483 1.82e-19 92.4
Msa1204590 AT3G51340.2 24.167 360 233 16 87 425 109 449 2.08e-19 92.4
Msa1204590 AT1G31450.1 27.411 394 237 15 63 424 66 442 6.68e-19 90.1
Msa1204590 AT1G66180.1 25.131 382 218 16 85 426 76 429 7.66e-19 90.1
Msa1204590 AT3G51360.2 28.163 245 151 7 87 315 105 340 3.05e-18 87.0
Msa1204590 AT3G51360.5 28.216 241 148 6 87 311 105 336 4.86e-18 87.4
Msa1204590 AT3G52500.1 25.980 408 213 21 79 424 88 468 5.51e-18 87.8
Msa1204590 AT3G51360.6 28.333 240 147 6 87 310 105 335 6.37e-18 87.4
Msa1204590 AT3G51360.4 28.216 241 148 6 87 311 95 326 1.29e-17 85.9
Msa1204590 AT4G35880.2 28.736 261 154 13 80 320 107 355 1.34e-17 86.3
Msa1204590 AT3G51360.10 28.333 240 147 6 87 310 95 325 1.60e-17 85.9
Msa1204590 AT3G51360.3 25.148 338 219 11 136 459 32 349 1.70e-17 85.1
Msa1204590 AT3G51360.8 25.148 338 219 11 136 459 32 349 1.70e-17 85.1
Msa1204590 AT3G51330.2 25.434 346 221 14 76 398 97 428 2.09e-17 85.9
Msa1204590 AT5G07030.1 26.087 368 235 14 74 424 108 455 1.11e-16 83.6
Msa1204590 AT1G79720.1 25.000 356 222 13 94 423 146 482 1.46e-14 77.0
Msa1204590 AT3G25700.2 28.571 224 136 7 23 224 21 242 4.29e-13 71.6
Msa1204590 AT1G03230.1 23.333 390 249 15 81 426 45 428 1.60e-12 70.5
Msa1204590 AT4G12920.1 23.514 370 216 18 81 423 58 387 3.41e-11 65.9
Msa1204590 AT1G69100.1 25.424 236 143 8 87 307 53 270 4.39e-11 65.5
Msa1204590 AT1G69100.2 25.424 236 143 8 87 307 61 278 4.88e-11 65.5

Find 192 sgRNAs with CRISPR-Local

Find 598 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
CAATATTTGGATTCTTTATT+TGG 0.074753 8_1:+60379368 Msa1204590:CDS
CTTCTAGGATTATCAATATT+TGG 0.130446 8_1:+60379355 Msa1204590:CDS
CTTCAAATCAATATTGTAAT+AGG 0.162833 8_1:-60375062 None:intergenic
GAATTTGTTGCTTCTGTATT+TGG 0.175956 8_1:-60376537 None:intergenic
AAACATAAATCATTATAATT+TGG 0.196794 8_1:-60375863 None:intergenic
TCGGGCTGGTGGAACGATTT+TGG 0.198131 8_1:-60370949 None:intergenic
TTCTATGCACAGAATATAAT+TGG 0.207420 8_1:+60377351 Msa1204590:intron
CCGGTAGTTGACATGGTATT+TGG 0.230846 8_1:+60376011 Msa1204590:CDS
TCAGCATGCTGATGGCATTA+TGG 0.246456 8_1:+60374757 Msa1204590:CDS
TGAGTCCAGCCAATTCTTTA+AGG 0.254469 8_1:-60376870 None:intergenic
GTTCTTCTTACATTGCTTCT+AGG 0.255464 8_1:+60379340 Msa1204590:CDS
CTATTGTTATTTCTGCGATT+TGG 0.274467 8_1:-60376807 None:intergenic
CGAGTTGATATCGTTGAAAA+TGG 0.287266 8_1:-60370923 None:intergenic
TGCTGATGGCATTATGGGTT+TGG 0.296050 8_1:+60374763 Msa1204590:CDS
CACCTGAAAATTACATGTTC+CGG 0.319075 8_1:+60376057 Msa1204590:CDS
CAGCATGCTGATGGCATTAT+GGG 0.323722 8_1:+60374758 Msa1204590:CDS
TAGATATTCTATCACCATTA+AGG 0.326274 8_1:+60379662 Msa1204590:three_prime_UTR
AGTGCTGACGTGGATGAATT+AGG 0.332127 8_1:-60371109 None:intergenic
CACGATGATCTTCTTCTTAA+CGG 0.337268 8_1:+60371196 Msa1204590:CDS
GAAATGATTCTCTCTCTAGA+TGG 0.347782 8_1:+60377221 Msa1204590:CDS
AGCATATGGCCTCGGGGTTA+TGG 0.352491 8_1:-60377245 None:intergenic
GAAGTTATAAGTTGATTGAT+TGG 0.363539 8_1:+60377415 Msa1204590:CDS
AGGCATTGGTGGTGGGGCAC+TGG 0.369257 8_1:-60376514 None:intergenic
TTAGGAGTGGTTAGGTATAG+AGG 0.375463 8_1:-60371091 None:intergenic
TCATAGCGTGGTGGCGGTTA+CGG 0.376388 8_1:-60371063 None:intergenic
CTATTACAATATTGATTTGA+AGG 0.379757 8_1:+60375063 Msa1204590:CDS
TTCAAATCAATATTGTAATA+GGG 0.383410 8_1:-60375061 None:intergenic
ATGTTATGCCTCCATCAAAA+AGG 0.384153 8_1:+60377439 Msa1204590:CDS
GGAGAGGATGTCATATCCTT+TGG 0.385217 8_1:+60374662 Msa1204590:CDS
ACAACTCTCTAAAACCTTTC+CGG 0.389051 8_1:+60375992 Msa1204590:CDS
AACCAACTGTGCTGAGTTAT+GGG 0.390028 8_1:+60376476 Msa1204590:CDS
GTATTTGGAGGCATTGGTGG+TGG 0.392955 8_1:-60376522 None:intergenic
AACTGAAGGATCCACTGATT+TGG 0.393066 8_1:-60376562 None:intergenic
AGTAAGAGGTGCATATTGTC+TGG 0.398691 8_1:+60376201 Msa1204590:CDS
GAAGCCTCGCCTTAAAGAAT+TGG 0.401268 8_1:+60376861 Msa1204590:CDS
GCTGATGGCATTATGGGTTT+GGG 0.405318 8_1:+60374764 Msa1204590:CDS
GATATTATACAACAAGGCTT+TGG 0.408295 8_1:+60371310 Msa1204590:intron
AATGCAAGAAATGCTTCTTC+CGG 0.408953 8_1:-60375184 None:intergenic
AACATTTCTCAGTAAACAAC+AGG 0.410030 8_1:-60379786 None:intergenic
GTTTGCTCTTATTGTTGATA+CGG 0.411824 8_1:+60371353 Msa1204590:CDS
ACGATGATCTTCTTCTTAAC+GGG 0.412086 8_1:+60371197 Msa1204590:CDS
AGCATAAACTTAGCTCATAA+TGG 0.414619 8_1:-60379460 None:intergenic
TCAGGAACAGCCACATCAAC+AGG 0.419004 8_1:-60379424 None:intergenic
GATCCTCGTCGCCAGCTTCA+CGG 0.421425 8_1:+60371133 Msa1204590:CDS
GTTGACATGGTATTTGGAAA+TGG 0.422231 8_1:+60376017 Msa1204590:CDS
TATTTGGAGGCATTGGTGGT+GGG 0.426047 8_1:-60376521 None:intergenic
TGGAGTCTCATACGAGCGTT+AGG 0.430642 8_1:-60371175 None:intergenic
GACAAGTCTGGCTGAAACTT+CGG 0.431090 8_1:-60374527 None:intergenic
TGGAAAACATGGAACGGTCT+TGG 0.433457 8_1:+60375135 Msa1204590:CDS
AAACCAACTGTGCTGAGTTA+TGG 0.434621 8_1:+60376475 Msa1204590:CDS
ACCTGAAAATTACATGTTCC+GGG 0.437759 8_1:+60376058 Msa1204590:CDS
TTGTGAATATTGTAATATAC+AGG 0.438389 8_1:+60379694 Msa1204590:three_prime_UTR
GTGAAGCATTCAAAAGTAAG+AGG 0.438577 8_1:+60376187 Msa1204590:intron
GCTTCTGTATTTGGAGGCAT+TGG 0.440440 8_1:-60376528 None:intergenic
TTGAAGGAGATACATGTTGC+GGG 0.444112 8_1:+60375079 Msa1204590:CDS
TTATAACTTCCGAAGGCATC+AGG 0.444624 8_1:-60377402 None:intergenic
TGATAGGTGCTTGACAAGTC+TGG 0.446093 8_1:-60374539 None:intergenic
CAATCCAATGTGCATTTGAC+AGG 0.453774 8_1:-60374563 None:intergenic
AAGCTGTAAAATTCAGTAAG+TGG 0.454037 8_1:-60377195 None:intergenic
TGTGCATTTGACAGGTTGAT+AGG 0.455260 8_1:-60374555 None:intergenic
GGCATTATGGGTTTGGGCCG+AGG 0.456097 8_1:+60374770 Msa1204590:CDS
AAATCATTATAATTTGGATC+TGG 0.457397 8_1:-60375857 None:intergenic
TGGTGGAATGGATGTTGGTG+GGG 0.458307 8_1:+60374859 Msa1204590:CDS
TTACCTCCTAAAAGAGTAGT+TGG 0.460377 8_1:-60376247 None:intergenic
TAATGTGGAGGATTAAGATT+AGG 0.460927 8_1:-60371009 None:intergenic
TTTGCTCTTATTGTTGATAC+GGG 0.463688 8_1:+60371354 Msa1204590:CDS
GAATGCGGTGTCGCCGGCGA+TGG 0.463853 8_1:-60371038 None:intergenic
ATTTGGAGGCATTGGTGGTG+GGG 0.464234 8_1:-60376520 None:intergenic
TTAGAAAAGTAATCAGCATA+TGG 0.465441 8_1:-60377259 None:intergenic
ATGCAACTTCCTGATGCCTT+CGG 0.465758 8_1:+60377393 Msa1204590:CDS
TGAACAGTGTGGTAGGCATC+AGG 0.468300 8_1:+60371410 Msa1204590:CDS
AGACATGGTCTTTGCACAAT+CGG 0.476402 8_1:+60374916 Msa1204590:CDS
AAGTAATCAGCATATGGCCT+CGG 0.477337 8_1:-60377253 None:intergenic
ATAGCAAGTGAACATGCTAC+TGG 0.479769 8_1:-60379514 None:intergenic
AGTAATCAGCATATGGCCTC+GGG 0.480119 8_1:-60377252 None:intergenic
AGTACTAGCAGTGGTGTCCT+TGG 0.482639 8_1:+60374641 Msa1204590:CDS
CATGGAACGGTCTTGGATAG+TGG 0.483146 8_1:+60375142 Msa1204590:CDS
CGTGCCATGAGGTGGTGACT+CGG 0.485553 8_1:-60370968 None:intergenic
GTGCAAAGACCATGTCTGAC+GGG 0.491570 8_1:-60374910 None:intergenic
TCGATTCGGATCCGTGAAGC+TGG 0.493679 8_1:-60371144 None:intergenic
ATTAGGATGAGGTGAGTTAG+TGG 0.497085 8_1:-60370992 None:intergenic
CCGAGGAGATCTTAGTATCA+TGG 0.498192 8_1:+60374787 Msa1204590:CDS
TCTGTATTTGGAGGCATTGG+TGG 0.503254 8_1:-60376525 None:intergenic
AGATACATGTTGCGGGGAAG+CGG 0.504761 8_1:+60375086 Msa1204590:CDS
GTGTGTTTCTCTCTGTTGAA+AGG 0.506595 8_1:-60370869 None:intergenic
TCTTAGTATCATGGATCAGC+TGG 0.506624 8_1:+60374796 Msa1204590:CDS
GGTTGTGAAAATGTTGAGAC+TGG 0.507573 8_1:+60374722 Msa1204590:CDS
CGGTGTCGCCGGCGATGGTG+TGG 0.507909 8_1:-60371033 None:intergenic
TGGATGAATTAGGAGTGGTT+AGG 0.509072 8_1:-60371099 None:intergenic
TAAACTTAGCTCATAATGGC+TGG 0.509664 8_1:-60379456 None:intergenic
CCTCGCCTTAAAGAATTGGC+TGG 0.512271 8_1:+60376865 Msa1204590:CDS
ACGGAGGAATGCGGTGTCGC+CGG 0.513765 8_1:-60371044 None:intergenic
ATGGTGGAATGGATGTTGGT+GGG 0.514568 8_1:+60374858 Msa1204590:CDS
TGTGAGGGTTCAATAATCAC+TGG 0.515287 8_1:-60379619 None:intergenic
GTTAAATGTTAATACTTCCC+AGG 0.515915 8_1:+60376903 Msa1204590:CDS
GGTGGAATGGATGTTGGTGG+GGG 0.516371 8_1:+60374860 Msa1204590:CDS
TTTGTTGCTTCTGTATTTGG+AGG 0.516680 8_1:-60376534 None:intergenic
CATACAAAACAAGAGTGTTT+CGG 0.517950 8_1:-60376422 None:intergenic
CTCACTATGCTATGGTGGAA+TGG 0.518751 8_1:+60374847 Msa1204590:CDS
CTCCCATAACTCAGCACAGT+TGG 0.520560 8_1:-60376478 None:intergenic
TAATATACAGGTGAATCAAA+AGG 0.521568 8_1:+60379706 Msa1204590:three_prime_UTR
TATGGTGGAATGGATGTTGG+TGG 0.521960 8_1:+60374857 Msa1204590:CDS
CAGCGATATTACATGATTGT+GGG 0.522512 8_1:+60379310 Msa1204590:CDS
GAGGTGGTGACTCGGGCTGG+TGG 0.529967 8_1:-60370960 None:intergenic
GCAGCGATATTACATGATTG+TGG 0.530324 8_1:+60379309 Msa1204590:CDS
CCAAATACCATGTCAACTAC+CGG 0.533480 8_1:-60376011 None:intergenic
GTTAGGGTGACGCTTCGATT+CGG 0.533924 8_1:-60371158 None:intergenic
ACAATAAGAGCAAACATTTG+CGG 0.535290 8_1:-60371345 None:intergenic
GCAAACCATGGTCACTGAGC+TGG 0.535697 8_1:+60379551 Msa1204590:three_prime_UTR
TAGCAAGTGAACATGCTACT+GGG 0.540792 8_1:-60379513 None:intergenic
GATTCATTCTCACTATGCTA+TGG 0.541146 8_1:+60374839 Msa1204590:CDS
GCATGCGGTGTTCAGCAAGC+CGG 0.541770 8_1:-60377374 None:intergenic
GAAATGAGACAGAGAGAGAA+TGG 0.545045 8_1:-60370897 None:intergenic
ATGCACAGAATATAATTGGC+CGG 0.545419 8_1:+60377355 Msa1204590:intron
CTTTACAGTCAGCATGCTGA+TGG 0.547879 8_1:+60374749 Msa1204590:CDS
ATCACTGGATAATGATATTG+TGG 0.549048 8_1:-60379604 None:intergenic
CACATTACCCACACCATCGC+CGG 0.549842 8_1:+60371025 Msa1204590:CDS
GTGCCATGAGGTGGTGACTC+GGG 0.551058 8_1:-60370967 None:intergenic
CACAATCGGATCCTGTGCGC+AGG 0.551490 8_1:+60374930 Msa1204590:CDS
GAAGAATCATAGCGTGGTGG+CGG 0.558506 8_1:-60371069 None:intergenic
TCGAGTCAGCGTCTTCCTCA+AGG 0.559738 8_1:-60370838 None:intergenic
GTAAGAGGTGCATATTGTCT+GGG 0.560931 8_1:+60376202 Msa1204590:CDS
AACCTTTCCGGTAGTTGACA+TGG 0.561389 8_1:+60376004 Msa1204590:CDS
TATCCGTTTGCAGATTGTGA+AGG 0.564116 8_1:+60375805 Msa1204590:intron
AATGGCTGGAGTTCTTGCTC+AGG 0.566629 8_1:-60379442 None:intergenic
AAATGATTCTCTCTCTAGAT+GGG 0.569000 8_1:+60377222 Msa1204590:CDS
GTTTCTCTCTGTTGAAAGGA+GGG 0.570349 8_1:-60370865 None:intergenic
TATGAGCTAAGTTTATGCTA+CGG 0.572242 8_1:+60379464 Msa1204590:exon
TGTTTCTCTCTGTTGAAAGG+AGG 0.574329 8_1:-60370866 None:intergenic
TGAAATACACACCTGCGCAC+AGG 0.582048 8_1:-60374941 None:intergenic
TGAAATGGTTCAGGAATTGG+TGG 0.582049 8_1:+60379287 Msa1204590:intron
GGAGGATTAAGATTAGGATG+AGG 0.582105 8_1:-60371003 None:intergenic
CTACTTGTGAACAGTGTGGT+AGG 0.582193 8_1:+60371403 Msa1204590:CDS
CTTGACCAGCTCAGTGACCA+TGG 0.582742 8_1:-60379556 None:intergenic
TGTGCAAAGACCATGTCTGA+CGG 0.585161 8_1:-60374911 None:intergenic
CATGGTCACTGAGCTGGTCA+AGG 0.585531 8_1:+60379557 Msa1204590:three_prime_UTR
CGGCGATGGTGTGGGTAATG+TGG 0.585560 8_1:-60371024 None:intergenic
CATGCTACTGGGGACTAATG+AGG 0.585644 8_1:-60379502 None:intergenic
TCACAACATAATGTACCTCC+AGG 0.585788 8_1:+60376597 Msa1204590:CDS
TTTGAAGGAGATACATGTTG+CGG 0.585915 8_1:+60375078 Msa1204590:CDS
TGCTATGGTGGAATGGATGT+TGG 0.586372 8_1:+60374854 Msa1204590:CDS
ACGAGGATCGAGTGCTGACG+TGG 0.588518 8_1:-60371119 None:intergenic
TACCATGTCAACTACCGGAA+AGG 0.589385 8_1:-60376006 None:intergenic
TCATTCTCACTATGCTATGG+TGG 0.589826 8_1:+60374842 Msa1204590:CDS
CCATGATACTAAGATCTCCT+CGG 0.590251 8_1:-60374787 None:intergenic
ATTGCAACTGTGACAATGAC+AGG 0.591815 8_1:+60374582 Msa1204590:CDS
AACAAATTCAACCAAATCAG+TGG 0.593686 8_1:+60376551 Msa1204590:CDS
CAGCCCGAGTCACCACCTCA+TGG 0.595284 8_1:+60370964 Msa1204590:exon
CGAGTCAGCGTCTTCCTCAA+GGG 0.597692 8_1:-60370837 None:intergenic
TAGCGTGGTGGCGGTTACGG+AGG 0.604815 8_1:-60371060 None:intergenic
CGATGGTGTGGGTAATGTGG+AGG 0.607098 8_1:-60371021 None:intergenic
CCAGCCAATTCTTTAAGGCG+AGG 0.607396 8_1:-60376865 None:intergenic
GGAGTCTCATACGAGCGTTA+GGG 0.610372 8_1:-60371174 None:intergenic
TGCAAAGACCATGTCTGACG+GGG 0.612972 8_1:-60374909 None:intergenic
GACACAGATGGAGCAACTGA+AGG 0.615542 8_1:-60376576 None:intergenic
CAATCTTTCAATCAAATCAG+CGG 0.615750 8_1:+60375833 Msa1204590:CDS
CGAGTCACCACCTCATGGCA+CGG 0.618025 8_1:+60370969 Msa1204590:exon
AATCAACTTATAACTTCCGA+AGG 0.619747 8_1:-60377409 None:intergenic
CAAGAAATGCTTCTTCCGGT+AGG 0.619929 8_1:-60375180 None:intergenic
CACTGTTCACAAGTAGAGCA+AGG 0.621366 8_1:-60371396 None:intergenic
GGTGTCGCCGGCGATGGTGT+GGG 0.622744 8_1:-60371032 None:intergenic
TACAACTTATGCATACCTAC+CGG 0.623191 8_1:+60375165 Msa1204590:CDS
TAGCAGTGGTGTCCTTGGAG+AGG 0.625789 8_1:+60374646 Msa1204590:CDS
TCAACCTGTCAAATGCACAT+TGG 0.626103 8_1:+60374559 Msa1204590:CDS
TTCATATAAACCTGTTGATG+TGG 0.628107 8_1:+60379414 Msa1204590:CDS
TATACAACAAGGCTTTGGAT+CGG 0.634892 8_1:+60371315 Msa1204590:CDS
ACATTATGTTGTGACACAGA+TGG 0.638085 8_1:-60376588 None:intergenic
AGGATATGACATCCTCTCCA+AGG 0.640200 8_1:-60374658 None:intergenic
ATGAGACAGAGAGAGAATGG+TGG 0.646219 8_1:-60370894 None:intergenic
TGAAGGAGATACATGTTGCG+GGG 0.648978 8_1:+60375080 Msa1204590:CDS
GAGTTAGTGGCCGTGCCATG+AGG 0.649163 8_1:-60370979 None:intergenic
GTGGCGGTTACGGAGGAATG+CGG 0.651422 8_1:-60371053 None:intergenic
AGAGCAATTAATGCAAACCA+TGG 0.651828 8_1:+60379539 Msa1204590:three_prime_UTR
AAGCTCGCTCTGATTTCCAA+AGG 0.652231 8_1:-60374678 None:intergenic
TTGCTCTTATTGTTGATACG+GGG 0.656841 8_1:+60371355 Msa1204590:CDS
TTAGTGGCCGTGCCATGAGG+TGG 0.657075 8_1:-60370976 None:intergenic
AGCAAGTGAACATGCTACTG+GGG 0.666247 8_1:-60379512 None:intergenic
TATACAGGTGAATCAAAAGG+TGG 0.668104 8_1:+60379709 Msa1204590:three_prime_UTR
ATAAGAGCAAACATTTGCGG+AGG 0.673966 8_1:-60371342 None:intergenic
GCAATGTAAGAAGAACAGCT+AGG 0.678502 8_1:-60379333 None:intergenic
GATCCGTGAAGCTGGCGACG+AGG 0.682000 8_1:-60371136 None:intergenic
TGTGTAGATATTATACAACA+AGG 0.686673 8_1:+60371304 Msa1204590:intron
AGGCATCAGGAAGTTGCATG+CGG 0.703204 8_1:-60377389 None:intergenic
TGCTCTACTTGTGAACAGTG+TGG 0.705783 8_1:+60371399 Msa1204590:CDS
GAGGAAGAATCATAGCGTGG+TGG 0.716889 8_1:-60371072 None:intergenic
GCAAAGACCATGTCTGACGG+GGG 0.720748 8_1:-60374908 None:intergenic
CTAGATGGGCCATAACCCCG+AGG 0.721119 8_1:+60377236 Msa1204590:CDS
ATAGAGGAAGAATCATAGCG+TGG 0.723609 8_1:-60371075 None:intergenic
GCTGAAATGAGTACTAGCAG+TGG 0.733461 8_1:+60374632 Msa1204590:CDS
TGACGTGGATGAATTAGGAG+TGG 0.736614 8_1:-60371104 None:intergenic
GTAATCAGCATATGGCCTCG+GGG 0.740741 8_1:-60377251 None:intergenic
CGTTAAGAAGAAGATCATCG+TGG 0.743458 8_1:-60371195 None:intergenic

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! ATATATATATATATATATAT+AGG + chr8_1:60372539-60372558 Msa1204590:intron 0.0%
!! TATATATATATATATATATA+GGG + chr8_1:60372538-60372557 Msa1204590:intron 0.0%
!! ATATATATATATATATATAT+GGG - chr8_1:60372539-60372558 None:intergenic 0.0%
!! TATATATATATATATATATA+TGG - chr8_1:60372538-60372557 None:intergenic 0.0%
!! TATATATATATATTATAAAA+TGG + chr8_1:60373617-60373636 Msa1204590:intron 0.0%
!! ATATATATATATTATAAAAT+GGG + chr8_1:60373618-60373637 Msa1204590:intron 0.0%
!! ATATATATATATATATATAT+GGG - chr8_1:60372539-60372558 None:intergenic 0.0%
!! TATATATATATATATATATA+TGG - chr8_1:60372538-60372557 None:intergenic 0.0%
!! AAACATAAATCATTATAATT+TGG - chr8_1:60375866-60375885 None:intergenic 10.0%
!! AATGTAAAAATTACAATATA+AGG - chr8_1:60379758-60379777 None:intergenic 10.0%
!!! AATGAAAACCAATATATTTT+TGG + chr8_1:60370813-60370832 Msa1204590:five_prime_UTR 15.0%
!! AAAAATTTAATGGTGTAAAA+TGG + chr8_1:60371864-60371883 Msa1204590:intron 15.0%
!! CATTTATTAGACAATTATTA+GGG - chr8_1:60371976-60371995 None:intergenic 15.0%
!! TAGAAATTTAGAAGTTAAAA+TGG - chr8_1:60372135-60372154 None:intergenic 15.0%
!!! TGTAATTTTGAAAATTAGAA+AGG + chr8_1:60372317-60372336 Msa1204590:intron 15.0%
!! TGAATTAATAAATAAAACCA+CGG - chr8_1:60373066-60373085 None:intergenic 15.0%
!! TTCAAATCAATATTGTAATA+GGG - chr8_1:60375064-60375083 None:intergenic 15.0%
!! CAAATTAGAAAATAATTTGA+AGG - chr8_1:60375296-60375315 None:intergenic 15.0%
!!! TATAATGATTTATGTTTTTC+TGG + chr8_1:60375869-60375888 Msa1204590:CDS 15.0%
!! ATGATTACTTTATGATAAAT+TGG + chr8_1:60377142-60377161 Msa1204590:intron 15.0%
!!! AAAAGGTTAGTTTTTTTTAA+TGG + chr8_1:60377456-60377475 Msa1204590:intron 15.0%
!!! ACTTTGAAAATTATTATGTT+GGG - chr8_1:60378719-60378738 None:intergenic 15.0%
!!! AACTTTGAAAATTATTATGT+TGG - chr8_1:60378720-60378739 None:intergenic 15.0%
!!! ATGAATTTTGGTTATGAAAA+TGG + chr8_1:60371560-60371579 Msa1204590:intron 20.0%
!!! TGAATTTTGGTTATGAAAAT+GGG + chr8_1:60371561-60371580 Msa1204590:intron 20.0%
!! GCATTTATTAGACAATTATT+AGG - chr8_1:60371977-60371996 None:intergenic 20.0%
!! TGATTGAAGTTAATATTTGA+TGG + chr8_1:60372072-60372091 Msa1204590:intron 20.0%
!!! TTTAATTTAAGCATTTCTCA+AGG + chr8_1:60372347-60372366 Msa1204590:intron 20.0%
!! ATAGTAAAGTAGAAATAAGA+GGG - chr8_1:60372406-60372425 None:intergenic 20.0%
!! AATAGTAAAGTAGAAATAAG+AGG - chr8_1:60372407-60372426 None:intergenic 20.0%
!!! CAAATGTAATTTTCATCTAA+AGG + chr8_1:60372716-60372735 Msa1204590:intron 20.0%
!! TAATTCATTTATGTTGACAT+TGG + chr8_1:60373079-60373098 Msa1204590:intron 20.0%
!! TTGGGCAAATTAAATATAAA+GGG - chr8_1:60373483-60373502 None:intergenic 20.0%
!! TTTGGGCAAATTAAATATAA+AGG - chr8_1:60373484-60373503 None:intergenic 20.0%
!! ATTGATTATATTGTACTGTA+TGG + chr8_1:60373943-60373962 Msa1204590:intron 20.0%
!! ATGGTAAGTAAAGTTATAAT+AGG + chr8_1:60374062-60374081 Msa1204590:intron 20.0%
!!! AATAAGAGCATAAATCAAAT+GGG - chr8_1:60374337-60374356 None:intergenic 20.0%
!! CTTCAAATCAATATTGTAAT+AGG - chr8_1:60375065-60375084 None:intergenic 20.0%
!!! CTATTACAATATTGATTTGA+AGG + chr8_1:60375063-60375082 Msa1204590:CDS 20.0%
!!! ATCTTGTTAAGTTTTTTTGA+TGG + chr8_1:60375650-60375669 Msa1204590:intron 20.0%
!! AAATCATTATAATTTGGATC+TGG - chr8_1:60375860-60375879 None:intergenic 20.0%
!!! TAGTAATTATTTTCTAACCT+GGG - chr8_1:60376923-60376942 None:intergenic 20.0%
!!! ATAGTAATTATTTTCTAACC+TGG - chr8_1:60376924-60376943 None:intergenic 20.0%
!!! AAAAAAACTAACCTTTTTGA+TGG - chr8_1:60377453-60377472 None:intergenic 20.0%
!! TAAGAGATAAATAAGTGAAA+AGG + chr8_1:60377671-60377690 Msa1204590:intron 20.0%
!! ATAAATAAGTGAAAAGGAAA+AGG + chr8_1:60377677-60377696 Msa1204590:intron 20.0%
!! ACAAAATAGACATACATAAA+GGG - chr8_1:60378159-60378178 None:intergenic 20.0%
!!! TTTGAAGTCTTATTTTTTTC+TGG - chr8_1:60378606-60378625 None:intergenic 20.0%
!!! CTTTGAAAATTATTATGTTG+GGG - chr8_1:60378718-60378737 None:intergenic 20.0%
!!! TTTTATTTATTGGATGAGTT+GGG + chr8_1:60378930-60378949 Msa1204590:intron 20.0%
!! TTGAATATAAATTCTTACAG+AGG + chr8_1:60379070-60379089 Msa1204590:intron 20.0%
!! TTCAAAAAATGAGAAATGTT+GGG - chr8_1:60379225-60379244 None:intergenic 20.0%
!! ATTCAAAAAATGAGAAATGT+TGG - chr8_1:60379226-60379245 None:intergenic 20.0%
!!! ATTAACACGTTTTTATGAAA+TGG + chr8_1:60379272-60379291 Msa1204590:intron 20.0%
!! CAATATTTGGATTCTTTATT+TGG + chr8_1:60379368-60379387 Msa1204590:CDS 20.0%
!!! TCTTTATTTGGAAAAAAAGA+CGG + chr8_1:60379380-60379399 Msa1204590:CDS 20.0%
!! TTGTGAATATTGTAATATAC+AGG + chr8_1:60379694-60379713 Msa1204590:three_prime_UTR 20.0%
! TGTGTAGATATTATACAACA+AGG + chr8_1:60371304-60371323 Msa1204590:intron 25.0%
!! TTTGTTGATGTGATGAATTT+TGG + chr8_1:60371548-60371567 Msa1204590:intron 25.0%
! TATGTGTATTCCGTTAATTA+CGG + chr8_1:60371629-60371648 Msa1204590:intron 25.0%
!! TAAGGTGTTATAAGATAGTT+TGG + chr8_1:60371773-60371792 Msa1204590:intron 25.0%
! TGGTAGGAGTAAAAATTTAA+TGG + chr8_1:60371854-60371873 Msa1204590:intron 25.0%
! AATTTAATGGTGTAAAATGG+AGG + chr8_1:60371867-60371886 Msa1204590:intron 25.0%
!! GTGAAGATTGATAGTATATT+TGG + chr8_1:60371891-60371910 Msa1204590:intron 25.0%
!!! AATTTTTCGGAAAAGAAATG+CGG - chr8_1:60372006-60372025 None:intergenic 25.0%
! TCAATCACATTAAAGTAAAG+TGG - chr8_1:60372059-60372078 None:intergenic 25.0%
! AACATTTCTACTATCAGATT+TGG - chr8_1:60372105-60372124 None:intergenic 25.0%
! TAGTAAAGTAGAAATAAGAG+GGG - chr8_1:60372405-60372424 None:intergenic 25.0%
! TGCATACTTCAACTTTAATT+TGG - chr8_1:60372698-60372717 None:intergenic 25.0%
!!! TTCTCTGTTTTTGAATTCAT+CGG + chr8_1:60372954-60372973 Msa1204590:intron 25.0%
! ACTTATTTATGTTGTTCTGA+AGG + chr8_1:60373194-60373213 Msa1204590:intron 25.0%
!!! AGTTTTGGTTTTATTGGAAT+TGG + chr8_1:60373295-60373314 Msa1204590:intron 25.0%
! GCAAAGTTATAACTAAAAAG+TGG - chr8_1:60373704-60373723 None:intergenic 25.0%
!! GAATAAGAGCATAAATCAAA+TGG - chr8_1:60374338-60374357 None:intergenic 25.0%
!! TTATTTAAAACTTGTACCGA+TGG + chr8_1:60374442-60374461 Msa1204590:intron 25.0%
! GTTAATTGTCCTATTTATCT+TGG + chr8_1:60374476-60374495 Msa1204590:intron 25.0%
! GAAACAAATCCAAGATAAAT+AGG - chr8_1:60374488-60374507 None:intergenic 25.0%
!!! TGTTTCTGTTTTACTTAAAC+AGG + chr8_1:60374502-60374521 Msa1204590:intron 25.0%
!! AATACTCTTATTGAAGCTTT+TGG + chr8_1:60375232-60375251 Msa1204590:intron 25.0%
!!! ATAGTTGGTGAATCATTTTA+CGG + chr8_1:60375437-60375456 Msa1204590:intron 25.0%
!! TTTTCCAGATGATATTTCTT+AGG + chr8_1:60375531-60375550 Msa1204590:intron 25.0%
! AATTCCTAAGAAATATCATC+TGG - chr8_1:60375538-60375557 None:intergenic 25.0%
! AAAATCATTGCATATAAGAC+TGG + chr8_1:60375621-60375640 Msa1204590:intron 25.0%
! GGATAAAAATTAGAGTTATC+AGG - chr8_1:60375790-60375809 None:intergenic 25.0%
! AATGATCCTATATAATTACC+CGG - chr8_1:60376079-60376098 None:intergenic 25.0%
! TGGAATAATATTTCACATCA+AGG - chr8_1:60376313-60376332 None:intergenic 25.0%
! AGCTACATAACACAAAATTA+GGG - chr8_1:60376336-60376355 None:intergenic 25.0%
! TAGCTACATAACACAAAATT+AGG - chr8_1:60376337-60376356 None:intergenic 25.0%
!!! AGCAAACAAAAATTGGTTTT+TGG + chr8_1:60376451-60376470 Msa1204590:CDS 25.0%
! TTAACTATATGCGTGTATTT+AGG + chr8_1:60376987-60377006 Msa1204590:intron 25.0%
! ATGACTTGAACTTTAAACTT+AGG - chr8_1:60377058-60377077 None:intergenic 25.0%
! TTAGAAAAGTAATCAGCATA+TGG - chr8_1:60377262-60377281 None:intergenic 25.0%
! TTCTATGCACAGAATATAAT+TGG + chr8_1:60377351-60377370 Msa1204590:intron 25.0%
!!! GAAGTTATAAGTTGATTGAT+TGG + chr8_1:60377415-60377434 Msa1204590:CDS 25.0%
! ATATGCAATTATGCAACAAA+TGG + chr8_1:60377540-60377559 Msa1204590:intron 25.0%
! TTAGCGAATGAATAAAAATG+TGG + chr8_1:60377644-60377663 Msa1204590:intron 25.0%
! ATTCATATAAAAGTTGACTG+AGG + chr8_1:60377796-60377815 Msa1204590:intron 25.0%
! ATGAGTCATGCAAAATTAAA+TGG + chr8_1:60377850-60377869 Msa1204590:intron 25.0%
!! GATTTTTACCTCTTTATAGA+TGG + chr8_1:60377877-60377896 Msa1204590:intron 25.0%
! CACAAAATAGACATACATAA+AGG - chr8_1:60378160-60378179 None:intergenic 25.0%
!! ATATGTTTATGGCATGTTTT+TGG - chr8_1:60378246-60378265 None:intergenic 25.0%
! AAAAACATGCCATAAACATA+TGG + chr8_1:60378245-60378264 Msa1204590:intron 25.0%
!! TTTGAAGTCTTAATGAGAAA+TGG - chr8_1:60378454-60378473 None:intergenic 25.0%
!!! CTTTTATTTATTGGATGAGT+TGG + chr8_1:60378929-60378948 Msa1204590:intron 25.0%
! AAACGTGTTAATATCTTAAG+TGG - chr8_1:60379264-60379283 None:intergenic 25.0%
!!! CTTCTAGGATTATCAATATT+TGG + chr8_1:60379355-60379374 Msa1204590:CDS 25.0%
! TAGATATTCTATCACCATTA+AGG + chr8_1:60379662-60379681 Msa1204590:three_prime_UTR 25.0%
! CACAAACAAAAATTCCTTAA+TGG - chr8_1:60379679-60379698 None:intergenic 25.0%
! TAATATACAGGTGAATCAAA+AGG + chr8_1:60379706-60379725 Msa1204590:three_prime_UTR 25.0%
TCAAGGGACCAAAAATATAT+TGG - chr8_1:60370824-60370843 None:intergenic 30.0%
!!! AATATATTTTTGGTCCCTTG+AGG + chr8_1:60370823-60370842 Msa1204590:five_prime_UTR 30.0%
! CATTTTCAACGATATCAACT+CGG + chr8_1:60370924-60370943 Msa1204590:five_prime_UTR 30.0%
TAATGTGGAGGATTAAGATT+AGG - chr8_1:60371012-60371031 None:intergenic 30.0%
GATTAAGAAAATGCGAGTAA+CGG - chr8_1:60371235-60371254 None:intergenic 30.0%
GATATTATACAACAAGGCTT+TGG + chr8_1:60371310-60371329 Msa1204590:intron 30.0%
ACAATAAGAGCAAACATTTG+CGG - chr8_1:60371348-60371367 None:intergenic 30.0%
GTTTGCTCTTATTGTTGATA+CGG + chr8_1:60371353-60371372 Msa1204590:CDS 30.0%
TTTGCTCTTATTGTTGATAC+GGG + chr8_1:60371354-60371373 Msa1204590:CDS 30.0%
ACACATGAATCCAATAGAAA+AGG - chr8_1:60371459-60371478 None:intergenic 30.0%
GGAAATGTTTACACTTTGAT+TGG + chr8_1:60371582-60371601 Msa1204590:intron 30.0%
ATGTTTACACTTTGATTGGT+TGG + chr8_1:60371586-60371605 Msa1204590:intron 30.0%
ACTATCACTTCCGTAATTAA+CGG - chr8_1:60371642-60371661 None:intergenic 30.0%
CACTCTAACAGTAAATAGAT+AGG + chr8_1:60371665-60371684 Msa1204590:intron 30.0%
! GATAGTTTGGTATGTTGTTT+AGG + chr8_1:60371786-60371805 Msa1204590:intron 30.0%
!!! TTTGGACTTGTTTTAAGAGT+TGG + chr8_1:60371909-60371928 Msa1204590:intron 30.0%
TTTCCGAAAAATTAGACTGA+AGG + chr8_1:60372013-60372032 Msa1204590:intron 30.0%
! TCACCTTCAGTCTAATTTTT+CGG - chr8_1:60372019-60372038 None:intergenic 30.0%
AGTAAAGTAGAAATAAGAGG+GGG - chr8_1:60372404-60372423 None:intergenic 30.0%
AGACCTTCATAAAAATGAGT+GGG - chr8_1:60372617-60372636 None:intergenic 30.0%
TAGACCTTCATAAAAATGAG+TGG - chr8_1:60372618-60372637 None:intergenic 30.0%
GTATTTGTGTCCAAGTAAAA+AGG - chr8_1:60372656-60372675 None:intergenic 30.0%
GGTTGAACTAAAACATTTCA+CGG - chr8_1:60372863-60372882 None:intergenic 30.0%
TATTTGCCTTCAATTCTTCA+TGG + chr8_1:60372897-60372916 Msa1204590:intron 30.0%
ATTTGCCTTCAATTCTTCAT+GGG + chr8_1:60372898-60372917 Msa1204590:intron 30.0%
AGAAGAAAGTCGAATATTTG+AGG - chr8_1:60372938-60372957 None:intergenic 30.0%
ATTGTCATAGATGCTGAATA+TGG + chr8_1:60372988-60373007 Msa1204590:intron 30.0%
! TGACATTGGAAAGTTTTCTA+TGG + chr8_1:60373093-60373112 Msa1204590:intron 30.0%
ACAACATAAATAAGTGACGA+CGG - chr8_1:60373189-60373208 None:intergenic 30.0%
!! TATTTATGTTGTTCTGAAGG+AGG + chr8_1:60373197-60373216 Msa1204590:intron 30.0%
GGAATTGGATTCAATTGAAT+TGG + chr8_1:60373310-60373329 Msa1204590:intron 30.0%
TAGACCTTCATAAAATGAAG+TGG + chr8_1:60373556-60373575 Msa1204590:intron 30.0%
AGACCTTCATAAAATGAAGT+GGG + chr8_1:60373557-60373576 Msa1204590:intron 30.0%
TTGCTAAAAGACACCTTAAT+GGG - chr8_1:60373659-60373678 None:intergenic 30.0%
CTAAAAGACACCTTCATAAA+AGG + chr8_1:60373723-60373742 Msa1204590:intron 30.0%
! ATATATATGGGTTTTGCTAG+AGG - chr8_1:60373752-60373771 None:intergenic 30.0%
TTAAATAAAGTCGTCACAAC+AGG + chr8_1:60373881-60373900 Msa1204590:intron 30.0%
TGAAAGTCTTTATTGTAGTG+CGG - chr8_1:60374192-60374211 None:intergenic 30.0%
TATTGAGAAACACAACACAA+GGG - chr8_1:60374383-60374402 None:intergenic 30.0%
TCTCAATACCATCAATTTCA+TGG + chr8_1:60374395-60374414 Msa1204590:intron 30.0%
TTAACAAATGACACATCCAT+CGG - chr8_1:60374461-60374480 None:intergenic 30.0%
! TCACACATTTACTCTAGTTT+CGG + chr8_1:60375026-60375045 Msa1204590:intron 30.0%
! GTTTTCCATCAAAAACACTT+GGG - chr8_1:60375123-60375142 None:intergenic 30.0%
! TGTTTTCCATCAAAAACACT+TGG - chr8_1:60375124-60375143 None:intergenic 30.0%
!! AGTGTTTTTGATGGAAAACA+TGG + chr8_1:60375124-60375143 Msa1204590:CDS 30.0%
! TTTTGATGGAAAACATGGAA+CGG + chr8_1:60375129-60375148 Msa1204590:CDS 30.0%
ATGAAAAAGTGAAACTTGTG+AGG + chr8_1:60375397-60375416 Msa1204590:intron 30.0%
! TCTGATTCACTTGTATTTTG+AGG + chr8_1:60375571-60375590 Msa1204590:intron 30.0%
! GCAATGATTTTCATAGTATG+AGG - chr8_1:60375612-60375631 None:intergenic 30.0%
GGTTTCTCTAATACTTTATG+TGG + chr8_1:60375671-60375690 Msa1204590:intron 30.0%
TAAAAAACAAACACAAAGGC+TGG - chr8_1:60375712-60375731 None:intergenic 30.0%
AGGCTAAAAAACAAACACAA+AGG - chr8_1:60375716-60375735 None:intergenic 30.0%
CAATCTTAACAGAGAAACAA+AGG - chr8_1:60375736-60375755 None:intergenic 30.0%
CAATCTTTCAATCAAATCAG+CGG + chr8_1:60375833-60375852 Msa1204590:CDS 30.0%
!! TGTCTGGGAATTTTTCAAAA+TGG + chr8_1:60376217-60376236 Msa1204590:CDS 30.0%
!! GGGAATTTTTCAAAATGGAA+AGG + chr8_1:60376222-60376241 Msa1204590:CDS 30.0%
AATGGCATAAAGTTACCAAA+AGG - chr8_1:60376280-60376299 None:intergenic 30.0%
TACATAACACAAAATTAGGG+TGG - chr8_1:60376333-60376352 None:intergenic 30.0%
!! CATACAAAACAAGAGTGTTT+CGG - chr8_1:60376425-60376444 None:intergenic 30.0%
!! GAATTTGTTGCTTCTGTATT+TGG - chr8_1:60376540-60376559 None:intergenic 30.0%
AACAAATTCAACCAAATCAG+TGG + chr8_1:60376551-60376570 Msa1204590:CDS 30.0%
! CTTTAATCGATTTAATGCAC+AGG + chr8_1:60376778-60376797 Msa1204590:intron 30.0%
!! CTATTGTTATTTCTGCGATT+TGG - chr8_1:60376810-60376829 None:intergenic 30.0%
GTTAAATGTTAATACTTCCC+AGG + chr8_1:60376903-60376922 Msa1204590:CDS 30.0%
AAGCTGTAAAATTCAGTAAG+TGG - chr8_1:60377198-60377217 None:intergenic 30.0%
! TTACTGAATTTTACAGCTTC+TGG + chr8_1:60377199-60377218 Msa1204590:CDS 30.0%
AAATGATTCTCTCTCTAGAT+GGG + chr8_1:60377222-60377241 Msa1204590:CDS 30.0%
ATTGTGCATCTTCATTTGTT+TGG + chr8_1:60377306-60377325 Msa1204590:intron 30.0%
CATAGAAATCACAGTCATAT+GGG - chr8_1:60377338-60377357 None:intergenic 30.0%
AATCAACTTATAACTTCCGA+AGG - chr8_1:60377412-60377431 None:intergenic 30.0%
! AAAACTAACCTTTTTGATGG+AGG - chr8_1:60377450-60377469 None:intergenic 30.0%
ATGATGTGCATATCTAATGA+AGG - chr8_1:60377510-60377529 None:intergenic 30.0%
!! ATGTGGGTTACATCTATTTT+GGG + chr8_1:60377913-60377932 Msa1204590:intron 30.0%
! TTTAAATTTGCTTCCACCAT+AGG - chr8_1:60378286-60378305 None:intergenic 30.0%
GAAATTACACATACTCATCT+TGG + chr8_1:60378857-60378876 Msa1204590:intron 30.0%
!! GTCTTCGAGCTTTTATTTAT+TGG + chr8_1:60378920-60378939 Msa1204590:intron 30.0%
! ACGTTTTTATGAAATGGTTC+AGG + chr8_1:60379278-60379297 Msa1204590:intron 30.0%
TTATGAAATGGTTCAGGAAT+TGG + chr8_1:60379284-60379303 Msa1204590:intron 30.0%
TTCATATAAACCTGTTGATG+TGG + chr8_1:60379414-60379433 Msa1204590:CDS 30.0%
AGCATAAACTTAGCTCATAA+TGG - chr8_1:60379463-60379482 None:intergenic 30.0%
TATGAGCTAAGTTTATGCTA+CGG + chr8_1:60379464-60379483 Msa1204590:exon 30.0%
ATCACTGGATAATGATATTG+TGG - chr8_1:60379607-60379626 None:intergenic 30.0%
! TTCTTTTTGTATCTCTGTGA+GGG - chr8_1:60379637-60379656 None:intergenic 30.0%
! ATTCTTTTTGTATCTCTGTG+AGG - chr8_1:60379638-60379657 None:intergenic 30.0%
AACATTTCTCAGTAAACAAC+AGG - chr8_1:60379789-60379808 None:intergenic 30.0%
!! CGAGTTGATATCGTTGAAAA+TGG - chr8_1:60370926-60370945 None:intergenic 35.0%
CACGATGATCTTCTTCTTAA+CGG + chr8_1:60371196-60371215 Msa1204590:CDS 35.0%
ACGATGATCTTCTTCTTAAC+GGG + chr8_1:60371197-60371216 Msa1204590:CDS 35.0%
!! TATACAACAAGGCTTTGGAT+CGG + chr8_1:60371315-60371334 Msa1204590:CDS 35.0%
TTGCTCTTATTGTTGATACG+GGG + chr8_1:60371355-60371374 Msa1204590:CDS 35.0%
!!! CGTTTTTTCGCCTTTTCTAT+TGG + chr8_1:60371446-60371465 Msa1204590:intron 35.0%
TGACTCTGTGTATTTGCAAA+TGG + chr8_1:60371487-60371506 Msa1204590:intron 35.0%
AACGGAATACACATAAGCAT+TGG - chr8_1:60371624-60371643 None:intergenic 35.0%
! AAATGCAGCACATTTTTCTC+TGG + chr8_1:60372285-60372304 Msa1204590:intron 35.0%
!! AGCACATTTTTCTCTGGAAA+AGG + chr8_1:60372291-60372310 Msa1204590:intron 35.0%
!! GCACATTTTTCTCTGGAAAA+GGG + chr8_1:60372292-60372311 Msa1204590:intron 35.0%
!! AGACCCACTCATTTTTATGA+AGG + chr8_1:60372611-60372630 Msa1204590:intron 35.0%
! GCAACCAAAACCTTTTTACT+TGG + chr8_1:60372643-60372662 Msa1204590:intron 35.0%
! GTGTCCAAGTAAAAAGGTTT+TGG - chr8_1:60372650-60372669 None:intergenic 35.0%
!!! ATACCCTTGGTTTTGTGTTT+TGG + chr8_1:60372672-60372691 Msa1204590:intron 35.0%
AAGGAAGAAAGAGAATGAAG+GGG - chr8_1:60372779-60372798 None:intergenic 35.0%
GAAGGAAGAAAGAGAATGAA+GGG - chr8_1:60372780-60372799 None:intergenic 35.0%
GTAACGAAACTTAGTGAAAG+TGG - chr8_1:60372826-60372845 None:intergenic 35.0%
TGAACTAAAACATTTCACGG+CGG - chr8_1:60372860-60372879 None:intergenic 35.0%
TCAGCATCTATGACAATCTA+TGG - chr8_1:60372985-60373004 None:intergenic 35.0%
TCATAGATGCTGAATATGGT+TGG + chr8_1:60372992-60373011 Msa1204590:intron 35.0%
TCTTATTCATCTCTTAACCG+TGG + chr8_1:60373046-60373065 Msa1204590:intron 35.0%
!!! GAAGCGAGTTTTGGTTTTAT+TGG + chr8_1:60373289-60373308 Msa1204590:intron 35.0%
!! AGAATGACCTTTAGAGTTCT+CGG + chr8_1:60373409-60373428 Msa1204590:intron 35.0%
TTGCCCAAAAAACAAAACCA+AGG + chr8_1:60373495-60373514 Msa1204590:intron 35.0%
TGCCCAAAAAACAAAACCAA+GGG + chr8_1:60373496-60373515 Msa1204590:intron 35.0%
!!! GACCCTTGGTTTTGTTTTTT+GGG - chr8_1:60373501-60373520 None:intergenic 35.0%
!!! AGACCCTTGGTTTTGTTTTT+TGG - chr8_1:60373502-60373521 None:intergenic 35.0%
! AGACCCACTTCATTTTATGA+AGG - chr8_1:60373563-60373582 None:intergenic 35.0%
GTTGCTAAAAGACACCTTAA+TGG - chr8_1:60373660-60373679 None:intergenic 35.0%
! TGATACACTTTTGTGTGTGT+GGG - chr8_1:60374033-60374052 None:intergenic 35.0%
AGGATTTCAAGGTCTTGAAT+AGG - chr8_1:60374146-60374165 None:intergenic 35.0%
TATTCAAGACCTTGAAATCC+TGG + chr8_1:60374145-60374164 Msa1204590:intron 35.0%
ATTCAAGACCTTGAAATCCT+GGG + chr8_1:60374146-60374165 Msa1204590:intron 35.0%
GTATTGAGAAACACAACACA+AGG - chr8_1:60374384-60374403 None:intergenic 35.0%
CAATACCATCAATTTCATGG+TGG + chr8_1:60374398-60374417 Msa1204590:intron 35.0%
GATTCATTCTCACTATGCTA+TGG + chr8_1:60374839-60374858 Msa1204590:CDS 35.0%
! CACACATTTACTCTAGTTTC+GGG + chr8_1:60375027-60375046 Msa1204590:intron 35.0%
! ACACATTTACTCTAGTTTCG+GGG + chr8_1:60375028-60375047 Msa1204590:intron 35.0%
TTTGAAGGAGATACATGTTG+CGG + chr8_1:60375078-60375097 Msa1204590:CDS 35.0%
TCAAAAACACTTGGGTTTAG+AGG - chr8_1:60375115-60375134 None:intergenic 35.0%
!! CTAAACCCAAGTGTTTTTGA+TGG + chr8_1:60375115-60375134 Msa1204590:CDS 35.0%
TACAACTTATGCATACCTAC+CGG + chr8_1:60375165-60375184 Msa1204590:CDS 35.0%
AATGCAAGAAATGCTTCTTC+CGG - chr8_1:60375187-60375206 None:intergenic 35.0%
!! ATTTGAAGGTGCCAACAAAA+TGG - chr8_1:60375282-60375301 None:intergenic 35.0%
! TATTGCTGTTGAACACATTG+CGG + chr8_1:60375460-60375479 Msa1204590:intron 35.0%
GAGTTATCAGGTCAATACAA+AGG - chr8_1:60375778-60375797 None:intergenic 35.0%
!! GATTTATGTTTTTCTGGTGC+TGG + chr8_1:60375875-60375894 Msa1204590:CDS 35.0%
TGTGACACATCACTGAAATA+CGG - chr8_1:60375975-60375994 None:intergenic 35.0%
!! ACAACTCTCTAAAACCTTTC+CGG + chr8_1:60375992-60376011 Msa1204590:CDS 35.0%
GTTGACATGGTATTTGGAAA+TGG + chr8_1:60376017-60376036 Msa1204590:CDS 35.0%
CACCTGAAAATTACATGTTC+CGG + chr8_1:60376057-60376076 Msa1204590:CDS 35.0%
ACCTGAAAATTACATGTTCC+GGG + chr8_1:60376058-60376077 Msa1204590:CDS 35.0%
CATGTTCCGGGTAATTATAT+AGG + chr8_1:60376070-60376089 Msa1204590:intron 35.0%
ATTACACCAGTCTCTAAACA+CGG - chr8_1:60376113-60376132 None:intergenic 35.0%
!! TTCATTATCCCTACTTTTCG+TGG + chr8_1:60376153-60376172 Msa1204590:intron 35.0%
!! TCATTATCCCTACTTTTCGT+GGG + chr8_1:60376154-60376173 Msa1204590:intron 35.0%
AAATTTCCCCACGAAAAGTA+GGG - chr8_1:60376164-60376183 None:intergenic 35.0%
AAAATTTCCCCACGAAAAGT+AGG - chr8_1:60376165-60376184 None:intergenic 35.0%
! GTGAAGCATTCAAAAGTAAG+AGG + chr8_1:60376187-60376206 Msa1204590:intron 35.0%
! AAGGATCCAACTACTCTTTT+AGG + chr8_1:60376241-60376260 Msa1204590:CDS 35.0%
TTACCTCCTAAAAGAGTAGT+TGG - chr8_1:60376250-60376269 None:intergenic 35.0%
CATCAAGGCAAAACATGAAA+TGG - chr8_1:60376298-60376317 None:intergenic 35.0%
! TTTGTTGCTTCTGTATTTGG+AGG - chr8_1:60376537-60376556 None:intergenic 35.0%
ACATTATGTTGTGACACAGA+TGG - chr8_1:60376591-60376610 None:intergenic 35.0%
AAAGCATGATGCACATATAC+AGG - chr8_1:60377122-60377141 None:intergenic 35.0%
AAATTCAGTAAGTGGATCTG+TGG - chr8_1:60377190-60377209 None:intergenic 35.0%
GAAATGATTCTCTCTCTAGA+TGG + chr8_1:60377221-60377240 Msa1204590:CDS 35.0%
! CTTTTCTAAGTCAACTGCAA+TGG + chr8_1:60377273-60377292 Msa1204590:CDS 35.0%
GCATAGAAATCACAGTCATA+TGG - chr8_1:60377339-60377358 None:intergenic 35.0%
ATGCACAGAATATAATTGGC+CGG + chr8_1:60377355-60377374 Msa1204590:intron 35.0%
ATGTTATGCCTCCATCAAAA+AGG + chr8_1:60377439-60377458 Msa1204590:CDS 35.0%
ATGGAGAAATGTCTTACACT+TGG + chr8_1:60377475-60377494 Msa1204590:intron 35.0%
AAAGTTGACTGAGGTGTAAT+TGG + chr8_1:60377805-60377824 Msa1204590:intron 35.0%
TAGATGTAACCCACATGTAA+GGG - chr8_1:60377909-60377928 None:intergenic 35.0%
ATAGATGTAACCCACATGTA+AGG - chr8_1:60377910-60377929 None:intergenic 35.0%
!! CATGTGGGTTACATCTATTT+TGG + chr8_1:60377912-60377931 Msa1204590:intron 35.0%
!! CTAGCATAAGTTTTGTGAGA+CGG + chr8_1:60377968-60377987 Msa1204590:intron 35.0%
! TGCCTTAAGTTGCAAATAAG+CGG + chr8_1:60378119-60378138 Msa1204590:intron 35.0%
AACCGCTTATTTGCAACTTA+AGG - chr8_1:60378124-60378143 None:intergenic 35.0%
AATAAGCGGTTTATCCAAAC+AGG + chr8_1:60378133-60378152 Msa1204590:intron 35.0%
! GTACTCTGTGTTTTCATTGA+TGG + chr8_1:60378199-60378218 Msa1204590:intron 35.0%
! TCTGTGTTTTCATTGATGGA+TGG + chr8_1:60378203-60378222 Msa1204590:intron 35.0%
AACATGCCATAAACATATGG+CGG + chr8_1:60378248-60378267 Msa1204590:intron 35.0%
!!! TCTGCTGTATTTGTTTTGTG+CGG - chr8_1:60378328-60378347 None:intergenic 35.0%
CGACATAAAATCGTAGTCTT+CGG - chr8_1:60378364-60378383 None:intergenic 35.0%
! CGATTTTATGTCGAAAACCA+TGG + chr8_1:60378371-60378390 Msa1204590:intron 35.0%
TCCTATAAGTACAACTCAGT+TGG + chr8_1:60378480-60378499 Msa1204590:intron 35.0%
ACCAACTGAGTTGTACTTAT+AGG - chr8_1:60378484-60378503 None:intergenic 35.0%
! TTTCTGGTCAAGTAGCATAT+TGG - chr8_1:60378590-60378609 None:intergenic 35.0%
AAATTATTATGTTGGGGCTG+CGG - chr8_1:60378712-60378731 None:intergenic 35.0%
!! TTTTGAGTCGTGACAATAAG+TGG + chr8_1:60378834-60378853 Msa1204590:intron 35.0%
TTTGAGTCGTGACAATAAGT+GGG + chr8_1:60378835-60378854 Msa1204590:intron 35.0%
TTACACATACTCATCTTGGA+TGG + chr8_1:60378861-60378880 Msa1204590:intron 35.0%
GTTTATCTATAGGTAGTTCC+AGG + chr8_1:60378960-60378979 Msa1204590:intron 35.0%
ATGATGACATGGCAATAGAA+AGG - chr8_1:60379020-60379039 None:intergenic 35.0%
TTCTATTGCCATGTCATCAT+TGG + chr8_1:60379020-60379039 Msa1204590:intron 35.0%
ACAATACATGTACAAGGTTG+TGG - chr8_1:60379156-60379175 None:intergenic 35.0%
GTGCAAACAATACATGTACA+AGG - chr8_1:60379162-60379181 None:intergenic 35.0%
CAGCGATATTACATGATTGT+GGG + chr8_1:60379310-60379329 Msa1204590:CDS 35.0%
GTTCTTCTTACATTGCTTCT+AGG + chr8_1:60379340-60379359 Msa1204590:CDS 35.0%
TAAACTTAGCTCATAATGGC+TGG - chr8_1:60379459-60379478 None:intergenic 35.0%
AGAGCAATTAATGCAAACCA+TGG + chr8_1:60379539-60379558 Msa1204590:three_prime_UTR 35.0%
TATACAGGTGAATCAAAAGG+TGG + chr8_1:60379709-60379728 Msa1204590:three_prime_UTR 35.0%
GTTTCTCTCTGTTGAAAGGA+GGG - chr8_1:60370868-60370887 None:intergenic 40.0%
TGTTTCTCTCTGTTGAAAGG+AGG - chr8_1:60370869-60370888 None:intergenic 40.0%
GTGTGTTTCTCTCTGTTGAA+AGG - chr8_1:60370872-60370891 None:intergenic 40.0%
GAAATGAGACAGAGAGAGAA+TGG - chr8_1:60370900-60370919 None:intergenic 40.0%
ATTAGGATGAGGTGAGTTAG+TGG - chr8_1:60370995-60371014 None:intergenic 40.0%
GGAGGATTAAGATTAGGATG+AGG - chr8_1:60371006-60371025 None:intergenic 40.0%
ATAGAGGAAGAATCATAGCG+TGG - chr8_1:60371078-60371097 None:intergenic 40.0%
TTAGGAGTGGTTAGGTATAG+AGG - chr8_1:60371094-60371113 None:intergenic 40.0%
TGGATGAATTAGGAGTGGTT+AGG - chr8_1:60371102-60371121 None:intergenic 40.0%
CGTTAAGAAGAAGATCATCG+TGG - chr8_1:60371198-60371217 None:intergenic 40.0%
! AAATGCGAGTAACGGAAAGA+AGG - chr8_1:60371227-60371246 None:intergenic 40.0%
ATAAGAGCAAACATTTGCGG+AGG - chr8_1:60371345-60371364 None:intergenic 40.0%
! ATGAAAGTACGTGCATAGCT+AGG + chr8_1:60371740-60371759 Msa1204590:intron 40.0%
TAGCTAGGAACTATGCACTA+AGG + chr8_1:60371755-60371774 Msa1204590:intron 40.0%
GCTAGAAACGAGTCTCATAA+TGG - chr8_1:60372224-60372243 None:intergenic 40.0%
ACACCCTCAATGTAGTAGAT+AGG + chr8_1:60372443-60372462 Msa1204590:intron 40.0%
CACCCTCAATGTAGTAGATA+GGG + chr8_1:60372444-60372463 Msa1204590:intron 40.0%
TGCCCTATCTACTACATTGA+GGG - chr8_1:60372449-60372468 None:intergenic 40.0%
TACTTGGACACAAATACCCT+TGG + chr8_1:60372659-60372678 Msa1204590:intron 40.0%
TGGCCAAAACACAAAACCAA+GGG - chr8_1:60372678-60372697 None:intergenic 40.0%
TTGGCCAAAACACAAAACCA+AGG - chr8_1:60372679-60372698 None:intergenic 40.0%
AGGAAGAAAGAGAATGAAGG+GGG - chr8_1:60372778-60372797 None:intergenic 40.0%
GGAAGGAAGAAAGAGAATGA+AGG - chr8_1:60372781-60372800 None:intergenic 40.0%
! TGAGAGAAGAGGTATAACGA+CGG - chr8_1:60372803-60372822 None:intergenic 40.0%
GCAAATACGTTTCAGATCAG+AGG - chr8_1:60372884-60372903 None:intergenic 40.0%
! GAATATTTGAGGTGTGACGA+CGG - chr8_1:60372927-60372946 None:intergenic 40.0%
!! TTCAAGTTTTGGCCTGTTAG+AGG - chr8_1:60373267-60373286 None:intergenic 40.0%
CTAACAGGCCAAAACTTGAA+TGG + chr8_1:60373267-60373286 Msa1204590:intron 40.0%
!! ACTCGCTTCCATTCAAGTTT+TGG - chr8_1:60373278-60373297 None:intergenic 40.0%
! ACTTGAATGGAAGCGAGTTT+TGG + chr8_1:60373280-60373299 Msa1204590:intron 40.0%
!! GAATGACCTTTAGAGTTCTC+GGG + chr8_1:60373410-60373429 Msa1204590:intron 40.0%
TTTCTTCCCGAGAACTCTAA+AGG - chr8_1:60373419-60373438 None:intergenic 40.0%
CTAAAAGACACCTTAATGGG+TGG - chr8_1:60373656-60373675 None:intergenic 40.0%
AAAGTGGAAATCACACCTTG+AGG - chr8_1:60373688-60373707 None:intergenic 40.0%
! CTAGAGGACACCTTTTATGA+AGG - chr8_1:60373736-60373755 None:intergenic 40.0%
GACAGGGCATATATGATAAG+AGG + chr8_1:60373843-60373862 Msa1204590:intron 40.0%
! CTGATACACTTTTGTGTGTG+TGG - chr8_1:60374034-60374053 None:intergenic 40.0%
! CACACACACAAAAGTGTATC+AGG + chr8_1:60374032-60374051 Msa1204590:intron 40.0%
TAAACAAAGTCAATGGACCC+AGG - chr8_1:60374166-60374185 None:intergenic 40.0%
!! GGGTCCATTGACTTTGTTTA+AGG + chr8_1:60374166-60374185 Msa1204590:intron 40.0%
CTCTTCCACCATGAAATTGA+TGG - chr8_1:60374406-60374425 None:intergenic 40.0%
GTGGAAGAGATGCAAAAGAA+TGG + chr8_1:60374417-60374436 Msa1204590:intron 40.0%
!! TGTGCATTTGACAGGTTGAT+AGG - chr8_1:60374558-60374577 None:intergenic 40.0%
TCAACCTGTCAAATGCACAT+TGG + chr8_1:60374559-60374578 Msa1204590:CDS 40.0%
CAATCCAATGTGCATTTGAC+AGG - chr8_1:60374566-60374585 None:intergenic 40.0%
ATTGCAACTGTGACAATGAC+AGG + chr8_1:60374582-60374601 Msa1204590:CDS 40.0%
GGTTGTGAAAATGTTGAGAC+TGG + chr8_1:60374722-60374741 Msa1204590:CDS 40.0%
CCATGATACTAAGATCTCCT+CGG - chr8_1:60374790-60374809 None:intergenic 40.0%
TCTTAGTATCATGGATCAGC+TGG + chr8_1:60374796-60374815 Msa1204590:CDS 40.0%
TCATTCTCACTATGCTATGG+TGG + chr8_1:60374842-60374861 Msa1204590:CDS 40.0%
AGACATGGTCTTTGCACAAT+CGG + chr8_1:60374916-60374935 Msa1204590:CDS 40.0%
TTGAAGGAGATACATGTTGC+GGG + chr8_1:60375079-60375098 Msa1204590:CDS 40.0%
!!! AATCTCACCTGCCATTTTGT+TGG + chr8_1:60375268-60375287 Msa1204590:intron 40.0%
CCAACTATAGCATGTAGAAG+TGG - chr8_1:60375425-60375444 None:intergenic 40.0%
CCACTTCTACATGCTATAGT+TGG + chr8_1:60375422-60375441 Msa1204590:intron 40.0%
CTCTGTTAAGATTGATGCTG+AGG + chr8_1:60375742-60375761 Msa1204590:intron 40.0%
TATCCGTTTGCAGATTGTGA+AGG + chr8_1:60375805-60375824 Msa1204590:intron 40.0%
GTTCCTTCACAATCTGCAAA+CGG - chr8_1:60375811-60375830 None:intergenic 40.0%
GTGACACATCACTGAAATAC+GGG - chr8_1:60375974-60375993 None:intergenic 40.0%
CCAAATACCATGTCAACTAC+CGG - chr8_1:60376014-60376033 None:intergenic 40.0%
! ACCCGGAACATGTAATTTTC+AGG - chr8_1:60376062-60376081 None:intergenic 40.0%
GTTTAACCGTGTTTAGAGAC+TGG + chr8_1:60376104-60376123 Msa1204590:intron 40.0%
!! CATTATCCCTACTTTTCGTG+GGG + chr8_1:60376155-60376174 Msa1204590:intron 40.0%
! AGTAAGAGGTGCATATTGTC+TGG + chr8_1:60376201-60376220 Msa1204590:CDS 40.0%
! GTAAGAGGTGCATATTGTCT+GGG + chr8_1:60376202-60376221 Msa1204590:CDS 40.0%
! GATCCAACTACTCTTTTAGG+AGG + chr8_1:60376244-60376263 Msa1204590:CDS 40.0%
! GGAGGTAACTTCATTCCTTT+TGG + chr8_1:60376262-60376281 Msa1204590:intron 40.0%
! GTAGCTAGCTTCTATGAGAT+AGG + chr8_1:60376350-60376369 Msa1204590:intron 40.0%
CCTGGGCAAAAAAATGACAT+CGG - chr8_1:60376393-60376412 None:intergenic 40.0%
GATCGCGAGCAAACAAAAAT+TGG + chr8_1:60376444-60376463 Msa1204590:CDS 40.0%
AAACCAACTGTGCTGAGTTA+TGG + chr8_1:60376475-60376494 Msa1204590:CDS 40.0%
AACCAACTGTGCTGAGTTAT+GGG + chr8_1:60376476-60376495 Msa1204590:CDS 40.0%
! AACTGAAGGATCCACTGATT+TGG - chr8_1:60376565-60376584 None:intergenic 40.0%
TCACAACATAATGTACCTCC+AGG + chr8_1:60376597-60376616 Msa1204590:CDS 40.0%
GAGAAGTTTATCATACCTGG+AGG - chr8_1:60376615-60376634 None:intergenic 40.0%
GACGAGAAGTTTATCATACC+TGG - chr8_1:60376618-60376637 None:intergenic 40.0%
TGAGTCCAGCCAATTCTTTA+AGG - chr8_1:60376873-60376892 None:intergenic 40.0%
! TTAGGGTGGGTTTCAAATTG+TGG + chr8_1:60377025-60377044 Msa1204590:intron 40.0%
AAGTAATCAGCATATGGCCT+CGG - chr8_1:60377256-60377275 None:intergenic 40.0%
!! TTATAACTTCCGAAGGCATC+AGG - chr8_1:60377405-60377424 None:intergenic 40.0%
AAGTGAAAAGGAAAAGGCAG+TGG + chr8_1:60377683-60377702 Msa1204590:intron 40.0%
AAGGAAAAGGCAGTGGAATA+AGG + chr8_1:60377690-60377709 Msa1204590:intron 40.0%
GGGCATATCCATCTATAAAG+AGG - chr8_1:60377888-60377907 None:intergenic 40.0%
AGATGTAACCCACATGTAAG+GGG - chr8_1:60377908-60377927 None:intergenic 40.0%
ACATACATAAAGGGCCTGTT+TGG - chr8_1:60378150-60378169 None:intergenic 40.0%
CACAGAGTACAGTCTAAGTA+AGG - chr8_1:60378189-60378208 None:intergenic 40.0%
! CATTGATGGATGGCAGATTA+TGG + chr8_1:60378213-60378232 Msa1204590:intron 40.0%
!!! CTGCTGTATTTGTTTTGTGC+GGG - chr8_1:60378327-60378346 None:intergenic 40.0%
GTGTCTATCAATCAAGTCCA+TGG - chr8_1:60378391-60378410 None:intergenic 40.0%
!! AAGCTCGAAGACTTTGAAGT+AGG - chr8_1:60378912-60378931 None:intergenic 40.0%
! TTATTGGATGAGTTGGGCTA+TGG + chr8_1:60378936-60378955 Msa1204590:intron 40.0%
! TATTGGATGAGTTGGGCTAT+GGG + chr8_1:60378937-60378956 Msa1204590:intron 40.0%
AAAGTGTAAGGGTTGTAACC+TGG - chr8_1:60378981-60379000 None:intergenic 40.0%
AGGTTACAACCCTTACACTT+TGG + chr8_1:60378980-60378999 Msa1204590:intron 40.0%
GGTTACAACCCTTACACTTT+GGG + chr8_1:60378981-60379000 Msa1204590:intron 40.0%
GTTACAACCCTTACACTTTG+GGG + chr8_1:60378982-60379001 Msa1204590:intron 40.0%
!! TCTTACAGAGGCATTCGATT+AGG + chr8_1:60379082-60379101 Msa1204590:intron 40.0%
TGAAATGGTTCAGGAATTGG+TGG + chr8_1:60379287-60379306 Msa1204590:intron 40.0%
GCAGCGATATTACATGATTG+TGG + chr8_1:60379309-60379328 Msa1204590:CDS 40.0%
GCAATGTAAGAAGAACAGCT+AGG - chr8_1:60379336-60379355 None:intergenic 40.0%
TAGCAAGTGAACATGCTACT+GGG - chr8_1:60379516-60379535 None:intergenic 40.0%
ATAGCAAGTGAACATGCTAC+TGG - chr8_1:60379517-60379536 None:intergenic 40.0%
TGTGAGGGTTCAATAATCAC+TGG - chr8_1:60379622-60379641 None:intergenic 40.0%
ATGAGACAGAGAGAGAATGG+TGG - chr8_1:60370897-60370916 None:intergenic 45.0%
TGACGTGGATGAATTAGGAG+TGG - chr8_1:60371107-60371126 None:intergenic 45.0%
!! AGTGCTGACGTGGATGAATT+AGG - chr8_1:60371112-60371131 None:intergenic 45.0%
CACTGTTCACAAGTAGAGCA+AGG - chr8_1:60371399-60371418 None:intergenic 45.0%
TGCTCTACTTGTGAACAGTG+TGG + chr8_1:60371399-60371418 Msa1204590:CDS 45.0%
CTACTTGTGAACAGTGTGGT+AGG + chr8_1:60371403-60371422 Msa1204590:CDS 45.0%
CTGCCCTATCTACTACATTG+AGG - chr8_1:60372450-60372469 None:intergenic 45.0%
CTCAATGTAGTAGATAGGGC+AGG + chr8_1:60372448-60372467 Msa1204590:intron 45.0%
ATGTAGTAGATAGGGCAGGA+AGG + chr8_1:60372452-60372471 Msa1204590:intron 45.0%
! GAGAGAAGAGGTATAACGAC+GGG - chr8_1:60372802-60372821 None:intergenic 45.0%
AGTGAAAGTGGTGAGAGAAG+AGG - chr8_1:60372814-60372833 None:intergenic 45.0%
CTAAGTTTCGTTACCAGAGC+CGG + chr8_1:60372832-60372851 Msa1204590:intron 45.0%
!! AAGTTTTGGCCTGTTAGAGG+TGG - chr8_1:60373264-60373283 None:intergenic 45.0%
GTCTTTGTGTCCAAGTGACA+AGG + chr8_1:60373518-60373537 Msa1204590:intron 45.0%
TTGCTAGAAGCCACCCATTA+AGG + chr8_1:60373643-60373662 Msa1204590:intron 45.0%
! TTTTAGCAACCCACACCTCA+AGG + chr8_1:60373670-60373689 Msa1204590:intron 45.0%
GAAATCACACCTTGAGGTGT+GGG - chr8_1:60373682-60373701 None:intergenic 45.0%
! GTGGGTGTGAAGTGTTACAT+GGG - chr8_1:60374015-60374034 None:intergenic 45.0%
! TGTGGGTGTGAAGTGTTACA+TGG - chr8_1:60374016-60374035 None:intergenic 45.0%
AAGTGTATCAGGTGAGTGCA+TGG + chr8_1:60374043-60374062 Msa1204590:intron 45.0%
TCAATGGACCCAGGATTTCA+AGG - chr8_1:60374157-60374176 None:intergenic 45.0%
GCGGCCTTAAACAAAGTCAA+TGG - chr8_1:60374173-60374192 None:intergenic 45.0%
GACAAGTCTGGCTGAAACTT+CGG - chr8_1:60374530-60374549 None:intergenic 45.0%
TGATAGGTGCTTGACAAGTC+TGG - chr8_1:60374542-60374561 None:intergenic 45.0%
GCTGAAATGAGTACTAGCAG+TGG + chr8_1:60374632-60374651 Msa1204590:CDS 45.0%
AGGATATGACATCCTCTCCA+AGG - chr8_1:60374661-60374680 None:intergenic 45.0%
GGAGAGGATGTCATATCCTT+TGG + chr8_1:60374662-60374681 Msa1204590:CDS 45.0%
AAGCTCGCTCTGATTTCCAA+AGG - chr8_1:60374681-60374700 None:intergenic 45.0%
CTTTACAGTCAGCATGCTGA+TGG + chr8_1:60374749-60374768 Msa1204590:CDS 45.0%
TCAGCATGCTGATGGCATTA+TGG + chr8_1:60374757-60374776 Msa1204590:CDS 45.0%
CAGCATGCTGATGGCATTAT+GGG + chr8_1:60374758-60374777 Msa1204590:CDS 45.0%
TGCTGATGGCATTATGGGTT+TGG + chr8_1:60374763-60374782 Msa1204590:CDS 45.0%
GCTGATGGCATTATGGGTTT+GGG + chr8_1:60374764-60374783 Msa1204590:CDS 45.0%
CCGAGGAGATCTTAGTATCA+TGG + chr8_1:60374787-60374806 Msa1204590:CDS 45.0%
! CTCACTATGCTATGGTGGAA+TGG + chr8_1:60374847-60374866 Msa1204590:CDS 45.0%
! TGCTATGGTGGAATGGATGT+TGG + chr8_1:60374854-60374873 Msa1204590:CDS 45.0%
! TATGGTGGAATGGATGTTGG+TGG + chr8_1:60374857-60374876 Msa1204590:CDS 45.0%
! ATGGTGGAATGGATGTTGGT+GGG + chr8_1:60374858-60374877 Msa1204590:CDS 45.0%
TGTGCAAAGACCATGTCTGA+CGG - chr8_1:60374914-60374933 None:intergenic 45.0%
! CATTTACTCTAGTTTCGGGG+TGG + chr8_1:60375031-60375050 Msa1204590:intron 45.0%
TGAAGGAGATACATGTTGCG+GGG + chr8_1:60375080-60375099 Msa1204590:CDS 45.0%
TGGAAAACATGGAACGGTCT+TGG + chr8_1:60375135-60375154 Msa1204590:CDS 45.0%
CAAGAAATGCTTCTTCCGGT+AGG - chr8_1:60375183-60375202 None:intergenic 45.0%
GAGTCTCGTGTTATCATGCA+TGG + chr8_1:60375317-60375336 Msa1204590:intron 45.0%
AACCTTTCCGGTAGTTGACA+TGG + chr8_1:60376004-60376023 Msa1204590:CDS 45.0%
TACCATGTCAACTACCGGAA+AGG - chr8_1:60376009-60376028 None:intergenic 45.0%
CCGGTAGTTGACATGGTATT+TGG + chr8_1:60376011-60376030 Msa1204590:CDS 45.0%
!!! CCGATGTCATTTTTTTGCCC+AGG + chr8_1:60376390-60376409 Msa1204590:intron 45.0%
!! TATTTGGAGGCATTGGTGGT+GGG - chr8_1:60376524-60376543 None:intergenic 45.0%
!! TCTGTATTTGGAGGCATTGG+TGG - chr8_1:60376528-60376547 None:intergenic 45.0%
! GCTTCTGTATTTGGAGGCAT+TGG - chr8_1:60376531-60376550 None:intergenic 45.0%
AGAGACATCATCTCGTAACG+TGG + chr8_1:60376657-60376676 Msa1204590:intron 45.0%
GAAGCCTCGCCTTAAAGAAT+TGG + chr8_1:60376861-60376880 Msa1204590:CDS 45.0%
TATGCGTGTATTTAGGCAGC+TGG + chr8_1:60376994-60377013 Msa1204590:intron 45.0%
AGTAATCAGCATATGGCCTC+GGG - chr8_1:60377255-60377274 None:intergenic 45.0%
ATGCAACTTCCTGATGCCTT+CGG + chr8_1:60377393-60377412 Msa1204590:CDS 45.0%
AAAAGGCAGTGGAATAAGGC+TGG + chr8_1:60377694-60377713 Msa1204590:intron 45.0%
TGAGGTGTAATTGGAGCAAG+AGG + chr8_1:60377814-60377833 Msa1204590:intron 45.0%
GAGGTGTAATTGGAGCAAGA+GGG + chr8_1:60377815-60377834 Msa1204590:intron 45.0%
ATGGATATGCCCCTTACATG+TGG + chr8_1:60377896-60377915 Msa1204590:intron 45.0%
TGGATATGCCCCTTACATGT+GGG + chr8_1:60377897-60377916 Msa1204590:intron 45.0%
! TGATGGATGGCAGATTATGG+TGG + chr8_1:60378216-60378235 Msa1204590:intron 45.0%
! TGCCATAAACATATGGCGGA+TGG + chr8_1:60378252-60378271 Msa1204590:intron 45.0%
TGCCATCCGCCATATGTTTA+TGG - chr8_1:60378257-60378276 None:intergenic 45.0%
!! ACATATGGCGGATGGCATAA+CGG + chr8_1:60378260-60378279 Msa1204590:intron 45.0%
GGACAATAATATGCATGCGC+CGG + chr8_1:60378512-60378531 Msa1204590:intron 45.0%
GACAATAATATGCATGCGCC+GGG + chr8_1:60378513-60378532 Msa1204590:intron 45.0%
ACAATAATATGCATGCGCCG+GGG + chr8_1:60378514-60378533 Msa1204590:intron 45.0%
ACTTTAAGCGTGGAGAAGTG+GGG - chr8_1:60378555-60378574 None:intergenic 45.0%
CACTTTAAGCGTGGAGAAGT+GGG - chr8_1:60378556-60378575 None:intergenic 45.0%
ACACTTTAAGCGTGGAGAAG+TGG - chr8_1:60378557-60378576 None:intergenic 45.0%
GGATTCACACACTTTAAGCG+TGG - chr8_1:60378565-60378584 None:intergenic 45.0%
TGGTCAAGTAGCATATTGGC+TGG - chr8_1:60378586-60378605 None:intergenic 45.0%
! ATTGGATGAGTTGGGCTATG+GGG + chr8_1:60378938-60378957 Msa1204590:intron 45.0%
GGGCTATGGGGTTTATCTAT+AGG + chr8_1:60378950-60378969 Msa1204590:intron 45.0%
ACATTCGCCCCAAAGTGTAA+GGG - chr8_1:60378992-60379011 None:intergenic 45.0%
AACATTCGCCCCAAAGTGTA+AGG - chr8_1:60378993-60379012 None:intergenic 45.0%
CTATCGCTCCAATGATGACA+TGG - chr8_1:60379031-60379050 None:intergenic 45.0%
! TGGAGCGATAGAAGTGTATG+TGG + chr8_1:60379040-60379059 Msa1204590:intron 45.0%
!! ACAGAGGCATTCGATTAGGT+TGG + chr8_1:60379086-60379105 Msa1204590:intron 45.0%
GGATAGACACTGCTCAACAT+AGG - chr8_1:60379204-60379223 None:intergenic 45.0%
AGCAAGTGAACATGCTACTG+GGG - chr8_1:60379515-60379534 None:intergenic 45.0%
!! ATGTAATAATAAAAATAATA+TGG + chr8_1:60371932-60371951 Msa1204590:intron 5.0%
!! ATATATATATATATATATAG+GGG + chr8_1:60372577-60372596 Msa1204590:intron 5.0%
!! TATATATATATATATATATG+GGG - chr8_1:60373597-60373616 None:intergenic 5.0%
!!! AAAATAAAAAAATTATGTTT+TGG + chr8_1:60377580-60377599 Msa1204590:intron 5.0%
GAAGAATCATAGCGTGGTGG+CGG - chr8_1:60371072-60371091 None:intergenic 50.0%
GAGGAAGAATCATAGCGTGG+TGG - chr8_1:60371075-60371094 None:intergenic 50.0%
GTTAGGGTGACGCTTCGATT+CGG - chr8_1:60371161-60371180 None:intergenic 50.0%
GGAGTCTCATACGAGCGTTA+GGG - chr8_1:60371177-60371196 None:intergenic 50.0%
TGGAGTCTCATACGAGCGTT+AGG - chr8_1:60371178-60371197 None:intergenic 50.0%
TGAACAGTGTGGTAGGCATC+AGG + chr8_1:60371410-60371429 Msa1204590:CDS 50.0%
CTGTGCTATCAGAGTGTGCT+TGG + chr8_1:60371834-60371853 Msa1204590:intron 50.0%
GCTATCAGAGTGTGCTTGGT+AGG + chr8_1:60371838-60371857 Msa1204590:intron 50.0%
! AGGGCAGGAAGGAAGTATGT+CGG + chr8_1:60372463-60372482 Msa1204590:intron 50.0%
! GAAGAGGTATAACGACGGGA+AGG - chr8_1:60372798-60372817 None:intergenic 50.0%
GGCGACCCATGAAGAATTGA+AGG - chr8_1:60372906-60372925 None:intergenic 50.0%
! TTTTGGCCTGTTAGAGGTGG+TGG - chr8_1:60373261-60373280 None:intergenic 50.0%
GTCATGTGTTGCAGAGAGCA+TGG + chr8_1:60373342-60373361 Msa1204590:intron 50.0%
! TGTGTTGCAGAGAGCATGGA+AGG + chr8_1:60373346-60373365 Msa1204590:intron 50.0%
CACTTGGACACAAAGACCCT+TGG - chr8_1:60373515-60373534 None:intergenic 50.0%
GGAAATCACACCTTGAGGTG+TGG - chr8_1:60373683-60373702 None:intergenic 50.0%
AGAGAGAGAGAGAGAGAGAC+AGG + chr8_1:60373826-60373845 Msa1204590:intron 50.0%
GAGAGAGAGAGAGAGAGACA+GGG + chr8_1:60373827-60373846 Msa1204590:intron 50.0%
AGTACTAGCAGTGGTGTCCT+TGG + chr8_1:60374641-60374660 Msa1204590:CDS 50.0%
CAACCAAAAACAGCACGCTG+TGG - chr8_1:60374707-60374726 None:intergenic 50.0%
TGGTGGAATGGATGTTGGTG+GGG + chr8_1:60374859-60374878 Msa1204590:CDS 50.0%
TGCAAAGACCATGTCTGACG+GGG - chr8_1:60374912-60374931 None:intergenic 50.0%
GTGCAAAGACCATGTCTGAC+GGG - chr8_1:60374913-60374932 None:intergenic 50.0%
TGAAATACACACCTGCGCAC+AGG - chr8_1:60374944-60374963 None:intergenic 50.0%
AGATACATGTTGCGGGGAAG+CGG + chr8_1:60375086-60375105 Msa1204590:CDS 50.0%
CATGGAACGGTCTTGGATAG+TGG + chr8_1:60375142-60375161 Msa1204590:CDS 50.0%
!! GAAGGTGCCAACAAAATGGC+AGG - chr8_1:60375278-60375297 None:intergenic 50.0%
TGTTTCGGACGACGATACCT+GGG - chr8_1:60376410-60376429 None:intergenic 50.0%
CTCCCATAACTCAGCACAGT+TGG - chr8_1:60376481-60376500 None:intergenic 50.0%
!! ATTTGGAGGCATTGGTGGTG+GGG - chr8_1:60376523-60376542 None:intergenic 50.0%
!! GTATTTGGAGGCATTGGTGG+TGG - chr8_1:60376525-60376544 None:intergenic 50.0%
GACACAGATGGAGCAACTGA+AGG - chr8_1:60376579-60376598 None:intergenic 50.0%
CATCATCTCGTAACGTGGCT+CGG + chr8_1:60376662-60376681 Msa1204590:intron 50.0%
ATCATCTCGTAACGTGGCTC+GGG + chr8_1:60376663-60376682 Msa1204590:intron 50.0%
!! CCAGCCAATTCTTTAAGGCG+AGG - chr8_1:60376868-60376887 None:intergenic 50.0%
CCTCGCCTTAAAGAATTGGC+TGG + chr8_1:60376865-60376884 Msa1204590:CDS 50.0%
CGTGTATTTAGGCAGCTGGA+CGG + chr8_1:60376998-60377017 Msa1204590:intron 50.0%
GTGTATTTAGGCAGCTGGAC+GGG + chr8_1:60376999-60377018 Msa1204590:intron 50.0%
GTAATCAGCATATGGCCTCG+GGG - chr8_1:60377254-60377273 None:intergenic 50.0%
AGGCATCAGGAAGTTGCATG+CGG - chr8_1:60377392-60377411 None:intergenic 50.0%
!! CAACTCAGTTGGTAGCTGCT+AGG + chr8_1:60378491-60378510 Msa1204590:intron 50.0%
TCAGGAACAGCCACATCAAC+AGG - chr8_1:60379427-60379446 None:intergenic 50.0%
AATGGCTGGAGTTCTTGCTC+AGG - chr8_1:60379445-60379464 None:intergenic 50.0%
CATGCTACTGGGGACTAATG+AGG - chr8_1:60379505-60379524 None:intergenic 50.0%
CGAGTCAGCGTCTTCCTCAA+GGG - chr8_1:60370840-60370859 None:intergenic 55.0%
TCGAGTCAGCGTCTTCCTCA+AGG - chr8_1:60370841-60370860 None:intergenic 55.0%
!!! TCGGGCTGGTGGAACGATTT+TGG - chr8_1:60370952-60370971 None:intergenic 55.0%
CGATGGTGTGGGTAATGTGG+AGG - chr8_1:60371024-60371043 None:intergenic 55.0%
CACATTACCCACACCATCGC+CGG + chr8_1:60371025-60371044 Msa1204590:CDS 55.0%
!! TCATAGCGTGGTGGCGGTTA+CGG - chr8_1:60371066-60371085 None:intergenic 55.0%
!! TCGATTCGGATCCGTGAAGC+TGG - chr8_1:60371147-60371166 None:intergenic 55.0%
AAAACATTTCACGGCGGCGC+CGG - chr8_1:60372854-60372873 None:intergenic 55.0%
!!! GGTGGTGGAGGAGCAAGTTT+TGG - chr8_1:60373246-60373265 None:intergenic 55.0%
! GTTGCAGAGAGCATGGAAGG+TGG + chr8_1:60373349-60373368 Msa1204590:intron 55.0%
! CAGAGAGCATGGAAGGTGGT+GGG + chr8_1:60373353-60373372 Msa1204590:intron 55.0%
GTGTCCAAGTGACAAGGTGC+AGG + chr8_1:60373524-60373543 Msa1204590:intron 55.0%
GCAACCTGCACCTTGTCACT+TGG - chr8_1:60373531-60373550 None:intergenic 55.0%
TAGCAGTGGTGTCCTTGGAG+AGG + chr8_1:60374646-60374665 Msa1204590:CDS 55.0%
!!! GCTCCACAGCGTGCTGTTTT+TGG + chr8_1:60374701-60374720 Msa1204590:CDS 55.0%
! GGTGGAATGGATGTTGGTGG+GGG + chr8_1:60374860-60374879 Msa1204590:CDS 55.0%
CATATCTCCCCCGTCAGACA+TGG + chr8_1:60374901-60374920 Msa1204590:CDS 55.0%
GCAAAGACCATGTCTGACGG+GGG - chr8_1:60374911-60374930 None:intergenic 55.0%
GTGTTTCGGACGACGATACC+TGG - chr8_1:60376411-60376430 None:intergenic 55.0%
TCATCTCGTAACGTGGCTCG+GGG + chr8_1:60376664-60376683 Msa1204590:intron 55.0%
AGCATATGGCCTCGGGGTTA+TGG - chr8_1:60377248-60377267 None:intergenic 55.0%
GATGGCATAACGGCCTATGG+TGG + chr8_1:60378270-60378289 Msa1204590:intron 55.0%
TTATGTTGGGGCTGCGGAAG+AGG - chr8_1:60378706-60378725 None:intergenic 55.0%
GCAAACCATGGTCACTGAGC+TGG + chr8_1:60379551-60379570 Msa1204590:three_prime_UTR 55.0%
CTTGACCAGCTCAGTGACCA+TGG - chr8_1:60379559-60379578 None:intergenic 55.0%
CATGGTCACTGAGCTGGTCA+AGG + chr8_1:60379557-60379576 Msa1204590:three_prime_UTR 55.0%
GTGCCATGAGGTGGTGACTC+GGG - chr8_1:60370970-60370989 None:intergenic 60.0%
CGTGCCATGAGGTGGTGACT+CGG - chr8_1:60370971-60370990 None:intergenic 60.0%
CGAGTCACCACCTCATGGCA+CGG + chr8_1:60370969-60370988 Msa1204590:exon 60.0%
TTAGTGGCCGTGCCATGAGG+TGG - chr8_1:60370979-60370998 None:intergenic 60.0%
GAGTTAGTGGCCGTGCCATG+AGG - chr8_1:60370982-60371001 None:intergenic 60.0%
CGGCGATGGTGTGGGTAATG+TGG - chr8_1:60371027-60371046 None:intergenic 60.0%
GTGGCGGTTACGGAGGAATG+CGG - chr8_1:60371056-60371075 None:intergenic 60.0%
!! ACGAGGATCGAGTGCTGACG+TGG - chr8_1:60371122-60371141 None:intergenic 60.0%
GATCCTCGTCGCCAGCTTCA+CGG + chr8_1:60371133-60371152 Msa1204590:CDS 60.0%
GCTCCTCCACCACCTCTAAC+AGG + chr8_1:60373252-60373271 Msa1204590:intron 60.0%
! TGGCCTGTTAGAGGTGGTGG+AGG - chr8_1:60373258-60373277 None:intergenic 60.0%
! GCAGAGAGCATGGAAGGTGG+TGG + chr8_1:60373352-60373371 Msa1204590:intron 60.0%
GGCATTATGGGTTTGGGCCG+AGG + chr8_1:60374770-60374789 Msa1204590:CDS 60.0%
! GGATGTTGGTGGGGGTGCAA+TGG + chr8_1:60374868-60374887 Msa1204590:CDS 60.0%
! GGTGGGGGTGCAATGGTTCT+TGG + chr8_1:60374875-60374894 Msa1204590:CDS 60.0%
! GGGGGTGCAATGGTTCTTGG+TGG + chr8_1:60374878-60374897 Msa1204590:CDS 60.0%
CACAATCGGATCCTGTGCGC+AGG + chr8_1:60374930-60374949 Msa1204590:CDS 60.0%
! CATCTCGTAACGTGGCTCGG+GGG + chr8_1:60376665-60376684 Msa1204590:intron 60.0%
!! AGGCAGCTGGACGGGTTGTT+AGG + chr8_1:60377007-60377026 Msa1204590:intron 60.0%
!! GGCAGCTGGACGGGTTGTTA+GGG + chr8_1:60377008-60377027 Msa1204590:intron 60.0%
!! AGCTGGACGGGTTGTTAGGG+TGG + chr8_1:60377011-60377030 Msa1204590:intron 60.0%
!! GCTGGACGGGTTGTTAGGGT+GGG + chr8_1:60377012-60377031 Msa1204590:intron 60.0%
CTAGATGGGCCATAACCCCG+AGG + chr8_1:60377236-60377255 Msa1204590:CDS 60.0%
GCATGCGGTGTTCAGCAAGC+CGG - chr8_1:60377377-60377396 None:intergenic 60.0%
GCGGATGGCATAACGGCCTA+TGG + chr8_1:60378267-60378286 Msa1204590:intron 60.0%
GGAATCCGGGGATTGAACCC+CGG - chr8_1:60378534-60378553 None:intergenic 60.0%
GTGGAGAAGTGGGGAATCCG+GGG - chr8_1:60378546-60378565 None:intergenic 60.0%
CGTGGAGAAGTGGGGAATCC+GGG - chr8_1:60378547-60378566 None:intergenic 60.0%
GCGTGGAGAAGTGGGGAATC+CGG - chr8_1:60378548-60378567 None:intergenic 60.0%
! CATGAGGTGGTGACTCGGGC+TGG - chr8_1:60370966-60370985 None:intergenic 65.0%
CAGCCCGAGTCACCACCTCA+TGG + chr8_1:60370964-60370983 Msa1204590:exon 65.0%
!! ACGGAGGAATGCGGTGTCGC+CGG - chr8_1:60371047-60371066 None:intergenic 65.0%
!! TAGCGTGGTGGCGGTTACGG+AGG - chr8_1:60371063-60371082 None:intergenic 65.0%
GATCCGTGAAGCTGGCGACG+AGG - chr8_1:60371139-60371158 None:intergenic 65.0%
!! AGGCATTGGTGGTGGGGCAC+TGG - chr8_1:60376517-60376536 None:intergenic 65.0%
ATGCGCCGGGGTTCAATCCC+CGG + chr8_1:60378526-60378545 Msa1204590:intron 65.0%
! GAGGTGGTGACTCGGGCTGG+TGG - chr8_1:60370963-60370982 None:intergenic 70.0%
! GGTGTCGCCGGCGATGGTGT+GGG - chr8_1:60371035-60371054 None:intergenic 70.0%
!! GAATGCGGTGTCGCCGGCGA+TGG - chr8_1:60371041-60371060 None:intergenic 70.0%
!! CGGTGTCGCCGGCGATGGTG+TGG - chr8_1:60371036-60371055 None:intergenic 75.0%
!! TTTCACGGCGGCGCCGGCTC+TGG - chr8_1:60372848-60372867 None:intergenic 75.0%
Chromosome Type Strat End Strand Name
chr8_1 gene 60370793 60379822 60370793 ID=Msa1204590;Name=Msa1204590
chr8_1 mRNA 60370793 60379822 60370793 ID=Msa1204590-mRNA-1;Parent=Msa1204590;Name=Msa1204590-mRNA-1;_AED=0.06;_eAED=0.06;_QI=190|1|1|1|1|1|12|354|631
chr8_1 exon 60370793 60371218 60370793 ID=Msa1204590-mRNA-1:exon:19530;Parent=Msa1204590-mRNA-1
chr8_1 exon 60371311 60371431 60371311 ID=Msa1204590-mRNA-1:exon:19531;Parent=Msa1204590-mRNA-1
chr8_1 exon 60374524 60374951 60374524 ID=Msa1204590-mRNA-1:exon:19532;Parent=Msa1204590-mRNA-1
chr8_1 exon 60375060 60375216 60375060 ID=Msa1204590-mRNA-1:exon:19533;Parent=Msa1204590-mRNA-1
chr8_1 exon 60375818 60375900 60375818 ID=Msa1204590-mRNA-1:exon:19534;Parent=Msa1204590-mRNA-1
chr8_1 exon 60375983 60376079 60375983 ID=Msa1204590-mRNA-1:exon:19535;Parent=Msa1204590-mRNA-1
chr8_1 exon 60376193 60376265 60376193 ID=Msa1204590-mRNA-1:exon:19536;Parent=Msa1204590-mRNA-1
chr8_1 exon 60376412 60376618 60376412 ID=Msa1204590-mRNA-1:exon:19537;Parent=Msa1204590-mRNA-1
chr8_1 exon 60376800 60376924 60376800 ID=Msa1204590-mRNA-1:exon:19538;Parent=Msa1204590-mRNA-1
chr8_1 exon 60377193 60377294 60377193 ID=Msa1204590-mRNA-1:exon:19539;Parent=Msa1204590-mRNA-1
chr8_1 exon 60377363 60377460 60377363 ID=Msa1204590-mRNA-1:exon:19540;Parent=Msa1204590-mRNA-1
chr8_1 exon 60379300 60379822 60379300 ID=Msa1204590-mRNA-1:exon:19541;Parent=Msa1204590-mRNA-1
chr8_1 five_prime_UTR 60370793 60370982 60370793 ID=Msa1204590-mRNA-1:five_prime_utr;Parent=Msa1204590-mRNA-1
chr8_1 CDS 60370983 60371218 60370983 ID=Msa1204590-mRNA-1:cds;Parent=Msa1204590-mRNA-1
chr8_1 CDS 60371311 60371431 60371311 ID=Msa1204590-mRNA-1:cds;Parent=Msa1204590-mRNA-1
chr8_1 CDS 60374524 60374951 60374524 ID=Msa1204590-mRNA-1:cds;Parent=Msa1204590-mRNA-1
chr8_1 CDS 60375060 60375216 60375060 ID=Msa1204590-mRNA-1:cds;Parent=Msa1204590-mRNA-1
chr8_1 CDS 60375818 60375900 60375818 ID=Msa1204590-mRNA-1:cds;Parent=Msa1204590-mRNA-1
chr8_1 CDS 60375983 60376079 60375983 ID=Msa1204590-mRNA-1:cds;Parent=Msa1204590-mRNA-1
chr8_1 CDS 60376193 60376265 60376193 ID=Msa1204590-mRNA-1:cds;Parent=Msa1204590-mRNA-1
chr8_1 CDS 60376412 60376618 60376412 ID=Msa1204590-mRNA-1:cds;Parent=Msa1204590-mRNA-1
chr8_1 CDS 60376800 60376924 60376800 ID=Msa1204590-mRNA-1:cds;Parent=Msa1204590-mRNA-1
chr8_1 CDS 60377193 60377294 60377193 ID=Msa1204590-mRNA-1:cds;Parent=Msa1204590-mRNA-1
chr8_1 CDS 60377363 60377460 60377363 ID=Msa1204590-mRNA-1:cds;Parent=Msa1204590-mRNA-1
chr8_1 CDS 60379300 60379468 60379300 ID=Msa1204590-mRNA-1:cds;Parent=Msa1204590-mRNA-1
chr8_1 three_prime_UTR 60379469 60379822 60379469 ID=Msa1204590-mRNA-1:three_prime_utr;Parent=Msa1204590-mRNA-1
Gene Sequence

>Msa1204590

ATGGCACGGCCACTAACTCACCTCATCCTAATCTTAATCCTCCACATTACCCACACCATCGCCGGCGACACCGCATTCCTCCGTAACCGCCACCACGCTATGATTCTTCCTCTATACCTAACCACTCCTAATTCATCCACGTCAGCACTCGATCCTCGTCGCCAGCTTCACGGATCCGAATCGAAGCGTCACCCTAACGCTCGTATGAGACTCCACGATGATCTTCTTCTTAACGGATATTATACAACAAGGCTTTGGATCGGTACTCCTCCGCAAATGTTTGCTCTTATTGTTGATACGGGGAGTACTGTTACGTATGTTCCTTGCTCTACTTGTGAACAGTGTGGTAGGCATCAGGATCCGAAGTTTCAGCCAGACTTGTCAAGCACCTATCAACCTGTCAAATGCACATTGGATTGCAACTGTGACAATGACAGGATGCAATGTGTGTATGAGAGACAGTATGCTGAAATGAGTACTAGCAGTGGTGTCCTTGGAGAGGATGTCATATCCTTTGGAAATCAGAGCGAGCTTGCTCCACAGCGTGCTGTTTTTGGTTGTGAAAATGTTGAGACTGGTGATCTTTACAGTCAGCATGCTGATGGCATTATGGGTTTGGGCCGAGGAGATCTTAGTATCATGGATCAGCTGGTTGACAAAAATGTAGTTAGTGATTCATTCTCACTATGCTATGGTGGAATGGATGTTGGTGGGGGTGCAATGGTTCTTGGTGGCATATCTCCCCCGTCAGACATGGTCTTTGCACAATCGGATCCTGTGCGCAGTCCCTATTACAATATTGATTTGAAGGAGATACATGTTGCGGGGAAGCGGCTGCCTCTAAACCCAAGTGTTTTTGATGGAAAACATGGAACGGTCTTGGATAGTGGTACAACTTATGCATACCTACCGGAAGAAGCATTTCTTGCATTTAAAGAAGCTATTGTGAAGGAACTTCAATCTTTCAATCAAATCAGCGGTCCAGATCCAAATTATAATGATTTATGTTTTTCTGGTGCTGGAATTGATGTGTCACAACTCTCTAAAACCTTTCCGGTAGTTGACATGGTATTTGGAAATGGTCACAAGTACTCACTGTCACCTGAAAATTACATGTTCCGGCATTCAAAAGTAAGAGGTGCATATTGTCTGGGAATTTTTCAAAATGGAAAGGATCCAACTACTCTTTTAGGAGGTATCGTCGTCCGAAACACTCTTGTTTTGTATGATCGCGAGCAAACAAAAATTGGTTTTTGGAAAACCAACTGTGCTGAGTTATGGGAGAGACTGCAGATATCCAGTGCCCCACCACCAATGCCTCCAAATACAGAAGCAACAAATTCAACCAAATCAGTGGATCCTTCAGTTGCTCCATCTGTGTCACAACATAATGTACCTCCAGGTGAATTCCAAATCGCAGAAATAACAATAGCAGTTTCATTTAATATCAGCTACGATGATATGAAGCCTCGCCTTAAAGAATTGGCTGGACTCATAGCTCACGAGTTAAATGTTAATACTTCCCAGATCCACTTACTGAATTTTACAGCTTCTGGAAATGATTCTCTCTCTAGATGGGCCATAACCCCGAGGCCATATGCTGATTACTTTTCTAAGTCAACTGCAATGAATATAATTGGCCGGCTTGCTGAACACCGCATGCAACTTCCTGATGCCTTCGGAAGTTATAAGTTGATTGATTGGAATGTTATGCCTCCATCAAAAAGGAATTGGTGGCAGCGATATTACATGATTGTGGGCCTAGCTGTTCTTCTTACATTGCTTCTAGGATTATCAATATTTGGATTCTTTATTTGGAAAAAAAGACGGCAAAGCGCACATTCATATAAACCTGTTGATGTGGCTGTTCCTGAGCAAGAACTCCAGCCATTATGA
Protein sequence

>Msa1204590

MARPLTHLILILILHITHTIAGDTAFLRNRHHAMILPLYLTTPNSSTSALDPRRQLHGSESKRHPNARMRLHDDLLLNGYYTTRLWIGTPPQMFALIVDTGSTVTYVPCSTCEQCGRHQDPKFQPDLSSTYQPVKCTLDCNCDNDRMQCVYERQYAEMSTSSGVLGEDVISFGNQSELAPQRAVFGCENVETGDLYSQHADGIMGLGRGDLSIMDQLVDKNVVSDSFSLCYGGMDVGGGAMVLGGISPPSDMVFAQSDPVRSPYYNIDLKEIHVAGKRLPLNPSVFDGKHGTVLDSGTTYAYLPEEAFLAFKEAIVKELQSFNQISGPDPNYNDLCFSGAGIDVSQLSKTFPVVDMVFGNGHKYSLSPENYMFRHSKVRGAYCLGIFQNGKDPTTLLGGIVVRNTLVLYDREQTKIGFWKTNCAELWERLQISSAPPPMPPNTEATNSTKSVDPSVAPSVSQHNVPPGEFQIAEITIAVSFNISYDDMKPRLKELAGLIAHELNVNTSQIHLLNFTASGNDSLSRWAITPRPYADYFSKSTAMNIIGRLAEHRMQLPDAFGSYKLIDWNVMPPSKRNWWQRYYMIVGLAVLLTLLLGLSIFGFFIWKKRRQSAHSYKPVDVAVPEQELQPL*