AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar zhongmu-4 / Msa1204760

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa1204760 MtrunA17_Chr4g0053721 97.022 638 12 1 1 631 1 638 0.0 1292
Msa1204760 MtrunA17_Chr5g0401601 74.491 639 147 5 9 631 9 647 0.0 989
Msa1204760 MtrunA17_Chr2g0320621 32.976 373 213 12 79 424 76 438 8.31e-49 177
Msa1204760 MtrunA17_Chr1g0179751 32.447 376 212 12 79 424 107 470 1.21e-47 175
Msa1204760 MtrunA17_Chr7g0265331 31.830 377 221 12 74 424 75 441 1.49e-46 171
Msa1204760 MtrunA17_Chr4g0027681 30.831 373 220 12 79 424 76 437 3.22e-45 167
Msa1204760 MtrunA17_Chr3g0130931 30.978 368 217 14 78 426 102 451 2.49e-38 147
Msa1204760 MtrunA17_Chr1g0189381 30.607 379 214 16 79 424 68 430 6.59e-34 135
Msa1204760 MtrunA17_Chr6g0484731 29.333 375 225 12 78 424 189 551 2.09e-32 132
Msa1204760 MtrunA17_Chr7g0221681 27.968 379 225 14 79 424 71 434 8.44e-31 126
Msa1204760 MtrunA17_Chr2g0291201 26.281 449 258 16 27 423 24 451 1.48e-30 125
Msa1204760 MtrunA17_Chr8g0384731 28.261 368 226 14 79 423 72 424 1.71e-30 124
Msa1204760 MtrunA17_Chr7g0249451 29.288 379 220 16 79 425 70 432 1.90e-30 125
Msa1204760 MtrunA17_Chr1g0159791 27.865 384 240 17 66 426 43 412 1.12e-29 122
Msa1204760 MtrunA17_Chr5g0419291 26.190 462 271 21 2 426 3 431 1.85e-29 121
Msa1204760 MtrunA17_Chr3g0130741 27.419 372 239 13 71 423 75 434 2.93e-28 118
Msa1204760 MtrunA17_Chr8g0352661 24.889 450 291 17 5 426 9 439 2.71e-27 115
Msa1204760 MtrunA17_Chr5g0435871 26.613 372 227 15 79 426 88 437 3.43e-26 112
Msa1204760 MtrunA17_Chr8g0371371 28.244 393 244 16 87 458 119 494 6.31e-26 112
Msa1204760 MtrunA17_Chr5g0435971 26.613 372 227 15 79 426 85 434 1.01e-25 110
Msa1204760 MtrunA17_Chr5g0442921 25.849 383 239 13 76 426 187 556 2.69e-25 110
Msa1204760 MtrunA17_Chr1g0212321 27.298 359 232 11 78 423 144 486 2.77e-25 109
Msa1204760 MtrunA17_Chr8g0386441 26.139 417 256 18 37 426 41 432 3.45e-25 108
Msa1204760 MtrunA17_Chr2g0310821 28.650 363 218 17 79 425 107 444 3.65e-25 108
Msa1204760 MtrunA17_Chr5g0395911 26.359 368 232 14 79 425 66 415 8.10e-25 107
Msa1204760 MtrunA17_Chr2g0310801 29.301 372 213 19 79 425 89 435 1.45e-24 107
Msa1204760 MtrunA17_Chr2g0310831 26.810 373 226 15 78 425 92 442 1.77e-24 106
Msa1204760 MtrunA17_Chr3g0095891 25.594 379 240 11 78 426 95 461 2.79e-24 106
Msa1204760 MtrunA17_Chr2g0307991 26.954 371 223 16 81 426 60 407 6.40e-24 104
Msa1204760 MtrunA17_Chr6g0484901 26.197 355 230 12 81 423 157 491 1.17e-23 104
Msa1204760 MtrunA17_Chr8g0352671 25.055 455 283 21 5 426 10 439 1.78e-23 103
Msa1204760 MtrunA17_Chr4g0001991 28.969 359 217 15 87 424 177 518 2.71e-23 103
Msa1204760 MtrunA17_Chr3g0099891 26.812 414 257 16 27 423 70 454 3.97e-23 102
Msa1204760 MtrunA17_Chr2g0307461 26.131 398 210 18 63 410 54 417 6.78e-23 102
Msa1204760 MtrunA17_Chr3g0078321 26.146 371 239 17 79 426 57 415 7.29e-23 101
Msa1204760 MtrunA17_Chr3g0087851 26.287 369 232 16 80 426 89 439 1.43e-22 100
Msa1204760 MtrunA17_Chr5g0415951 26.738 374 219 16 81 425 89 436 1.48e-22 100
Msa1204760 MtrunA17_Chr5g0395931 26.146 371 230 14 79 425 87 437 1.84e-22 100
Msa1204760 MtrunA17_Chr1g0165201 25.549 364 233 13 78 423 126 469 2.06e-22 100
Msa1204760 MtrunA17_Chr2g0308001 26.154 390 229 16 81 437 59 422 3.36e-22 100
Msa1204760 MtrunA17_Chr8g0390761 26.453 344 221 13 81 410 117 442 4.14e-22 99.8
Msa1204760 MtrunA17_Chr1g0210201 29.201 363 216 15 78 423 129 467 6.18e-22 99.4
Msa1204760 MtrunA17_Chr2g0311451 27.660 376 218 16 79 425 87 437 1.27e-21 98.2
Msa1204760 MtrunA17_Chr7g0239001 24.550 444 277 19 25 430 9 432 1.40e-21 97.8
Msa1204760 MtrunA17_Chr8g0371351 24.810 395 247 17 80 445 101 474 1.72e-21 98.6
Msa1204760 MtrunA17_Chr3g0110191 25.722 381 214 15 85 426 91 441 6.66e-21 95.9
Msa1204760 MtrunA17_Chr6g0486981 25.337 371 232 13 81 426 89 439 2.60e-20 94.0
Msa1204760 MtrunA17_Chr2g0333991 26.954 371 221 16 79 422 87 434 8.73e-20 92.4
Msa1204760 MtrunA17_Chr2g0309561 22.899 476 271 15 23 423 54 508 1.17e-19 92.8
Msa1204760 MtrunA17_Chr5g0434411 25.066 379 227 14 85 428 86 442 1.51e-19 91.7
Msa1204760 MtrunA17_Chr3g0099901 26.923 364 236 13 75 423 137 485 2.90e-19 91.3
Msa1204760 MtrunA17_Chr7g0275731 24.390 369 233 14 78 423 139 484 8.34e-19 89.7
Msa1204760 MtrunA17_Chr4g0061641 28.150 373 218 19 77 426 54 399 1.53e-18 88.2
Msa1204760 MtrunA17_Chr5g0425141 22.850 407 263 18 87 461 108 495 2.74e-18 88.6
Msa1204760 MtrunA17_Chr5g0434441 24.734 376 228 13 85 425 73 428 3.60e-18 87.4
Msa1204760 MtrunA17_Chr7g0267171 24.882 422 237 19 59 425 71 467 1.90e-17 85.5
Msa1204760 MtrunA17_Chr4g0023351 28.507 221 134 7 81 282 59 274 2.09e-17 83.2
Msa1204760 MtrunA17_Chr5g0395871 26.216 370 227 15 78 424 79 425 3.40e-17 84.3
Msa1204760 MtrunA17_Chr5g0406001 23.543 446 272 19 77 481 108 525 7.43e-17 84.0
Msa1204760 MtrunA17_Chr6g0457401 24.668 377 252 13 65 425 78 438 7.57e-17 83.6
Msa1204760 MtrunA17_Chr3g0112051 22.581 465 265 20 1 429 10 415 1.00e-16 83.2
Msa1204760 MtrunA17_Chr6g0487471 24.029 412 274 16 37 425 41 436 1.29e-16 82.8
Msa1204760 MtrunA17_Chr2g0312941 24.211 380 235 14 77 418 84 448 1.80e-16 82.4
Msa1204760 MtrunA17_Chr1g0164401 24.100 361 231 17 81 423 93 428 1.07e-15 79.7
Msa1204760 MtrunA17_Chr2g0287831 26.111 360 238 12 81 418 40 393 1.77e-15 79.0
Msa1204760 MtrunA17_Chr8g0353261 24.227 388 254 16 53 423 69 433 5.17e-15 77.8
Msa1204760 MtrunA17_Chr2g0287811 23.116 398 226 16 77 418 36 409 9.79e-12 67.4
Msa1204760 MtrunA17_Chr5g0395891 24.839 310 197 12 133 425 24 314 1.17e-11 66.2
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa1204760 AT5G43100.1 59.667 600 234 5 34 631 31 624 0.0 758
Msa1204760 AT3G50050.1 57.504 633 243 8 10 631 15 632 0.0 719
Msa1204760 AT5G43100.2 65.487 452 149 4 34 484 31 476 0.0 612
Msa1204760 AT5G22850.1 33.422 377 216 11 74 424 74 441 4.96e-54 192
Msa1204760 AT1G08210.1 33.422 377 213 12 74 424 77 441 4.16e-49 179
Msa1204760 AT1G08210.3 32.626 377 216 11 74 424 125 489 5.86e-49 179
Msa1204760 AT1G08210.4 32.626 377 216 11 74 424 111 475 6.38e-49 179
Msa1204760 AT2G36670.2 32.808 381 211 14 74 424 93 458 1.99e-47 174
Msa1204760 AT2G36670.4 32.632 380 211 14 75 424 28 392 2.67e-47 172
Msa1204760 AT2G36670.3 32.632 380 211 14 75 424 28 392 2.67e-47 172
Msa1204760 AT2G36670.1 32.620 374 207 14 81 424 105 463 1.72e-46 172
Msa1204760 AT1G08210.2 31.436 404 212 13 74 424 77 468 1.38e-44 167
Msa1204760 AT5G36260.1 31.863 408 221 18 55 424 46 434 2.66e-39 151
Msa1204760 AT3G25700.1 29.252 441 262 18 23 424 21 450 2.68e-37 145
Msa1204760 AT1G05840.1 29.319 382 214 15 79 424 78 439 1.11e-36 144
Msa1204760 AT2G03200.1 30.214 374 220 13 78 426 104 461 1.47e-36 143
Msa1204760 AT3G02740.1 29.867 375 217 15 79 424 83 440 1.44e-34 137
Msa1204760 AT3G02740.2 29.759 373 216 15 81 424 10 365 9.74e-34 134
Msa1204760 AT2G28220.1 27.982 436 264 17 5 427 3 401 6.83e-33 131
Msa1204760 AT2G28010.1 26.799 403 258 12 38 428 19 396 1.16e-32 130
Msa1204760 AT4G33490.2 28.058 417 265 15 34 426 9 414 2.01e-31 127
Msa1204760 AT3G42550.1 26.682 431 233 14 31 431 20 397 8.87e-31 125
Msa1204760 AT1G65240.1 28.822 399 232 18 60 424 47 427 1.06e-30 126
Msa1204760 AT2G28040.2 27.229 415 260 16 24 427 2 385 2.64e-30 123
Msa1204760 AT2G28040.1 26.895 409 257 16 35 428 14 395 8.59e-30 122
Msa1204760 AT1G77480.2 27.561 410 244 15 55 426 28 422 1.01e-28 119
Msa1204760 AT2G28225.1 28.611 360 221 12 81 428 67 402 1.33e-28 119
Msa1204760 AT4G30030.1 26.685 371 215 14 81 423 78 419 2.19e-28 118
Msa1204760 AT1G77480.1 27.561 410 244 15 55 426 28 422 2.87e-28 119
Msa1204760 AT5G10770.1 28.311 438 262 19 14 424 62 474 5.43e-27 115
Msa1204760 AT5G10080.1 25.432 405 250 14 87 457 106 492 2.37e-26 114
Msa1204760 AT2G28030.1 26.374 364 236 11 73 428 53 392 2.46e-26 112
Msa1204760 AT3G51350.1 24.933 373 242 14 76 425 97 454 6.80e-26 112
Msa1204760 AT4G33490.1 28.061 392 247 15 34 401 6 386 9.12e-26 110
Msa1204760 AT2G17760.1 28.261 368 205 18 87 423 110 449 7.20e-25 109
Msa1204760 AT3G18490.1 26.648 364 227 16 78 423 159 500 1.15e-24 108
Msa1204760 AT3G59080.1 26.031 388 233 15 76 426 165 535 1.52e-24 108
Msa1204760 AT1G64830.1 26.287 369 230 13 79 426 84 431 1.56e-24 107
Msa1204760 AT3G12700.1 24.831 443 299 13 5 423 28 460 2.80e-24 107
Msa1204760 AT1G44130.1 25.745 369 240 14 79 426 47 402 4.64e-24 105
Msa1204760 AT2G23945.1 26.772 381 219 18 81 426 96 451 9.00e-24 105
Msa1204760 AT3G54400.1 28.532 361 216 18 81 423 88 424 1.91e-23 103
Msa1204760 AT3G51360.9 24.938 401 253 12 87 459 105 485 3.31e-23 103
Msa1204760 AT2G42980.1 25.130 386 241 11 76 426 155 527 3.57e-23 103
Msa1204760 AT3G51360.7 24.938 401 253 12 87 459 11 391 3.70e-23 102
Msa1204760 AT1G01300.1 25.337 371 229 14 78 424 139 485 5.02e-23 103
Msa1204760 AT3G51360.1 24.938 401 253 12 87 459 95 475 8.20e-23 102
Msa1204760 AT4G30040.1 25.405 370 217 15 81 418 85 427 1.49e-22 101
Msa1204760 AT1G25510.1 26.741 359 230 11 78 423 145 483 4.32e-22 100
Msa1204760 AT5G02190.1 25.815 399 219 19 88 434 80 453 6.80e-22 99.8
Msa1204760 AT5G33340.1 25.693 397 248 15 53 426 65 437 1.20e-21 98.6
Msa1204760 AT3G51330.1 25.201 373 242 14 76 425 97 455 1.42e-21 99.4
Msa1204760 AT3G51330.3 25.067 371 241 14 76 423 97 453 2.92e-21 97.8
Msa1204760 AT1G09750.1 26.685 371 222 18 79 423 102 448 4.71e-21 97.1
Msa1204760 AT2G35615.1 27.586 406 241 17 54 424 57 444 1.55e-20 95.5
Msa1204760 AT2G39710.1 25.792 442 247 22 26 418 16 425 3.21e-20 94.4
Msa1204760 AT3G20015.1 26.796 362 230 13 78 423 128 470 3.58e-20 94.4
Msa1204760 AT5G10760.1 25.833 360 233 13 76 423 127 464 9.67e-20 93.2
Msa1204760 AT3G59080.2 25.464 377 213 14 76 426 165 499 1.29e-19 92.8
Msa1204760 AT4G35880.1 25.876 371 232 19 80 428 107 456 1.77e-19 92.8
Msa1204760 AT3G61820.1 27.913 369 226 16 78 423 132 483 1.82e-19 92.4
Msa1204760 AT3G51340.2 24.167 360 233 16 87 425 109 449 2.08e-19 92.4
Msa1204760 AT1G31450.1 27.411 394 237 15 63 424 66 442 6.68e-19 90.1
Msa1204760 AT1G66180.1 25.131 382 218 16 85 426 76 429 7.66e-19 90.1
Msa1204760 AT3G51360.2 28.163 245 151 7 87 315 105 340 3.05e-18 87.0
Msa1204760 AT3G51360.5 28.216 241 148 6 87 311 105 336 4.86e-18 87.4
Msa1204760 AT3G52500.1 25.980 408 213 21 79 424 88 468 5.51e-18 87.8
Msa1204760 AT3G51360.6 28.333 240 147 6 87 310 105 335 6.37e-18 87.4
Msa1204760 AT3G51360.4 28.216 241 148 6 87 311 95 326 1.29e-17 85.9
Msa1204760 AT4G35880.2 28.736 261 154 13 80 320 107 355 1.34e-17 86.3
Msa1204760 AT3G51360.10 28.333 240 147 6 87 310 95 325 1.60e-17 85.9
Msa1204760 AT3G51360.3 25.148 338 219 11 136 459 32 349 1.70e-17 85.1
Msa1204760 AT3G51360.8 25.148 338 219 11 136 459 32 349 1.70e-17 85.1
Msa1204760 AT3G51330.2 25.434 346 221 14 76 398 97 428 2.09e-17 85.9
Msa1204760 AT5G07030.1 26.087 368 235 14 74 424 108 455 1.11e-16 83.6
Msa1204760 AT1G79720.1 25.000 356 222 13 94 423 146 482 1.46e-14 77.0
Msa1204760 AT3G25700.2 28.571 224 136 7 23 224 21 242 4.29e-13 71.6
Msa1204760 AT1G03230.1 23.333 390 249 15 81 426 45 428 1.60e-12 70.5
Msa1204760 AT4G12920.1 23.514 370 216 18 81 423 58 387 3.41e-11 65.9
Msa1204760 AT1G69100.1 25.424 236 143 8 87 307 53 270 4.39e-11 65.5
Msa1204760 AT1G69100.2 25.424 236 143 8 87 307 61 278 4.88e-11 65.5

Find 192 sgRNAs with CRISPR-Local

Find 606 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
CAATATTTGGATTCTTTATT+TGG 0.074753 8_1:+60566261 Msa1204760:CDS
CTTCTAGGATTATCAATATT+TGG 0.130446 8_1:+60566248 Msa1204760:CDS
CTTCAAATCAATATTGTAAT+AGG 0.162833 8_1:-60561959 None:intergenic
GAATTTGTTGCTTCTGTATT+TGG 0.175956 8_1:-60563435 None:intergenic
AAACATAAATCATTATAATT+TGG 0.196794 8_1:-60562761 None:intergenic
TCGGGCTGGTGGAACGATTT+TGG 0.198131 8_1:-60557903 None:intergenic
TTCTATGCACAGAATATAAT+TGG 0.207420 8_1:+60564249 Msa1204760:intron
CCGGTAGTTGACATGGTATT+TGG 0.230846 8_1:+60562909 Msa1204760:CDS
TCAGCATGCTGATGGCATTA+TGG 0.246456 8_1:+60561654 Msa1204760:CDS
TGAGTCCAGCCAATTCTTTA+AGG 0.254469 8_1:-60563768 None:intergenic
GTTCTTCTTACATTGCTTCT+AGG 0.255464 8_1:+60566233 Msa1204760:CDS
CTATTGTTATTTCTGCGATT+TGG 0.274467 8_1:-60563705 None:intergenic
CGAGTTGATATCGTTGAAAA+TGG 0.287266 8_1:-60557877 None:intergenic
TGCTGATGGCATTATGGGTT+TGG 0.296050 8_1:+60561660 Msa1204760:CDS
CACCTGAAAATTACATGTTC+CGG 0.319075 8_1:+60562955 Msa1204760:CDS
CAGCATGCTGATGGCATTAT+GGG 0.323722 8_1:+60561655 Msa1204760:CDS
TAGATATTCTATCACCATTA+AGG 0.326274 8_1:+60566555 Msa1204760:three_prime_UTR
AGTGCTGACGTGGATGAATT+AGG 0.332127 8_1:-60558063 None:intergenic
CACGATGATCTTCTTCTTAA+CGG 0.337268 8_1:+60558150 Msa1204760:CDS
GAAATGATTCTCTCTCTAGA+TGG 0.347782 8_1:+60564119 Msa1204760:CDS
AGCATATGGCCTCGGGGTTA+TGG 0.352491 8_1:-60564143 None:intergenic
GAAGTTATAAGTTGATTGAT+TGG 0.363539 8_1:+60564313 Msa1204760:CDS
AGGCATTGGTGGTGGGGCAC+TGG 0.369257 8_1:-60563412 None:intergenic
TTAGGAGTGGTTAGGTATAG+AGG 0.375463 8_1:-60558045 None:intergenic
TCATAGCGTGGTGGCGGTTA+CGG 0.376388 8_1:-60558017 None:intergenic
CTATTACAATATTGATTTGA+AGG 0.379757 8_1:+60561960 Msa1204760:CDS
TTCAAATCAATATTGTAATA+GGG 0.383410 8_1:-60561958 None:intergenic
ATGTTATGCCTCCATCAAAA+AGG 0.384153 8_1:+60564337 Msa1204760:CDS
GGAGAGGATGTCATATCCTT+TGG 0.385217 8_1:+60561559 Msa1204760:CDS
ACAACTCTCTAAAACCTTTC+CGG 0.389051 8_1:+60562890 Msa1204760:CDS
AACCAACTGTGCTGAGTTAT+GGG 0.390028 8_1:+60563374 Msa1204760:CDS
GTATTTGGAGGCATTGGTGG+TGG 0.392955 8_1:-60563420 None:intergenic
AACTGAAGGATCCACTGATT+TGG 0.393066 8_1:-60563460 None:intergenic
AGTAAGAGGTGCATATTGTC+TGG 0.398691 8_1:+60563099 Msa1204760:CDS
GAAGCCTCGCCTTAAAGAAT+TGG 0.401268 8_1:+60563759 Msa1204760:CDS
GCTGATGGCATTATGGGTTT+GGG 0.405318 8_1:+60561661 Msa1204760:CDS
GATATTATACAACAAGGCTT+TGG 0.408295 8_1:+60558264 Msa1204760:intron
AATGCAAGAAATGCTTCTTC+CGG 0.408953 8_1:-60562081 None:intergenic
AACATTTCTCAGTAAACAAC+AGG 0.410030 8_1:-60566679 None:intergenic
GTTTGCTCTTATTGTTGATA+CGG 0.411824 8_1:+60558307 Msa1204760:CDS
ACGATGATCTTCTTCTTAAC+GGG 0.412086 8_1:+60558151 Msa1204760:CDS
AGCATAAACTTAGCTCATAA+TGG 0.414619 8_1:-60566353 None:intergenic
TCAGGAACAGCCACATCAAC+AGG 0.419004 8_1:-60566317 None:intergenic
GATCCTCGTCGCCAGCTTCA+CGG 0.421425 8_1:+60558087 Msa1204760:CDS
GTTGACATGGTATTTGGAAA+TGG 0.422231 8_1:+60562915 Msa1204760:CDS
TATTTGGAGGCATTGGTGGT+GGG 0.426047 8_1:-60563419 None:intergenic
TGGAGTCTCATACGAGCGTT+AGG 0.430642 8_1:-60558129 None:intergenic
GACAAGTCTGGCTGAAACTT+CGG 0.431090 8_1:-60561424 None:intergenic
TGGAAAACATGGAACGGTCT+TGG 0.433457 8_1:+60562032 Msa1204760:CDS
AAACCAACTGTGCTGAGTTA+TGG 0.434621 8_1:+60563373 Msa1204760:CDS
ACCTGAAAATTACATGTTCC+GGG 0.437759 8_1:+60562956 Msa1204760:CDS
TTGTGAATATTGTAATATAC+AGG 0.438389 8_1:+60566587 Msa1204760:three_prime_UTR
GTGAAGCATTCAAAAGTAAG+AGG 0.438577 8_1:+60563085 Msa1204760:intron
GCTTCTGTATTTGGAGGCAT+TGG 0.440440 8_1:-60563426 None:intergenic
TTGAAGGAGATACATGTTGC+GGG 0.444112 8_1:+60561976 Msa1204760:CDS
TTATAACTTCCGAAGGCATC+AGG 0.444624 8_1:-60564300 None:intergenic
TGATAGGTGCTTGACAAGTC+TGG 0.446093 8_1:-60561436 None:intergenic
CAATCCAATGTGCATTTGAC+AGG 0.453774 8_1:-60561460 None:intergenic
AAGCTGTAAAATTCAGTAAG+TGG 0.454037 8_1:-60564093 None:intergenic
TGTGCATTTGACAGGTTGAT+AGG 0.455260 8_1:-60561452 None:intergenic
GGCATTATGGGTTTGGGCCG+AGG 0.456097 8_1:+60561667 Msa1204760:CDS
AAATCATTATAATTTGGATC+TGG 0.457397 8_1:-60562755 None:intergenic
TGGTGGAATGGATGTTGGTG+GGG 0.458307 8_1:+60561756 Msa1204760:CDS
TTACCTCCTAAAAGAGTAGT+TGG 0.460377 8_1:-60563145 None:intergenic
TAATGTGGAGGATTAAGATT+AGG 0.460927 8_1:-60557963 None:intergenic
TTTGCTCTTATTGTTGATAC+GGG 0.463688 8_1:+60558308 Msa1204760:CDS
GAATGCGGTGTCGCCGGCGA+TGG 0.463853 8_1:-60557992 None:intergenic
ATTTGGAGGCATTGGTGGTG+GGG 0.464234 8_1:-60563418 None:intergenic
TTAGAAAAGTAATCAGCATA+TGG 0.465441 8_1:-60564157 None:intergenic
ATGCAACTTCCTGATGCCTT+CGG 0.465758 8_1:+60564291 Msa1204760:CDS
TGAACAGTGTGGTAGGCATC+AGG 0.468300 8_1:+60558364 Msa1204760:CDS
AGACATGGTCTTTGCACAAT+CGG 0.476402 8_1:+60561813 Msa1204760:CDS
AAGTAATCAGCATATGGCCT+CGG 0.477337 8_1:-60564151 None:intergenic
ATAGCAAGTGAACATGCTAC+TGG 0.479769 8_1:-60566407 None:intergenic
AGTAATCAGCATATGGCCTC+GGG 0.480119 8_1:-60564150 None:intergenic
AGTACTAGCAGTGGTGTCCT+TGG 0.482639 8_1:+60561538 Msa1204760:CDS
CATGGAACGGTCTTGGATAG+TGG 0.483146 8_1:+60562039 Msa1204760:CDS
CGTGCCATGAGGTGGTGACT+CGG 0.485553 8_1:-60557922 None:intergenic
GTGCAAAGACCATGTCTGAC+GGG 0.491570 8_1:-60561807 None:intergenic
TCGATTCGGATCCGTGAAGC+TGG 0.493679 8_1:-60558098 None:intergenic
ATTAGGATGAGGTGAGTTAG+TGG 0.497085 8_1:-60557946 None:intergenic
CCGAGGAGATCTTAGTATCA+TGG 0.498192 8_1:+60561684 Msa1204760:CDS
TCTGTATTTGGAGGCATTGG+TGG 0.503254 8_1:-60563423 None:intergenic
AGATACATGTTGCGGGGAAG+CGG 0.504761 8_1:+60561983 Msa1204760:CDS
GTGTGTTTCTCTCTGTTGAA+AGG 0.506595 8_1:-60557823 None:intergenic
TCTTAGTATCATGGATCAGC+TGG 0.506624 8_1:+60561693 Msa1204760:CDS
GGTTGTGAAAATGTTGAGAC+TGG 0.507573 8_1:+60561619 Msa1204760:CDS
CGGTGTCGCCGGCGATGGTG+TGG 0.507909 8_1:-60557987 None:intergenic
TGGATGAATTAGGAGTGGTT+AGG 0.509072 8_1:-60558053 None:intergenic
TAAACTTAGCTCATAATGGC+TGG 0.509664 8_1:-60566349 None:intergenic
CCTCGCCTTAAAGAATTGGC+TGG 0.512271 8_1:+60563763 Msa1204760:CDS
ACGGAGGAATGCGGTGTCGC+CGG 0.513765 8_1:-60557998 None:intergenic
ATGGTGGAATGGATGTTGGT+GGG 0.514568 8_1:+60561755 Msa1204760:CDS
TGTGAGGGTTCAATAATCAC+TGG 0.515287 8_1:-60566512 None:intergenic
GTTAAATGTTAATACTTCCC+AGG 0.515915 8_1:+60563801 Msa1204760:CDS
GGTGGAATGGATGTTGGTGG+GGG 0.516371 8_1:+60561757 Msa1204760:CDS
TTTGTTGCTTCTGTATTTGG+AGG 0.516680 8_1:-60563432 None:intergenic
CATACAAAACAAGAGTGTTT+CGG 0.517950 8_1:-60563320 None:intergenic
CTCACTATGCTATGGTGGAA+TGG 0.518751 8_1:+60561744 Msa1204760:CDS
CTCCCATAACTCAGCACAGT+TGG 0.520560 8_1:-60563376 None:intergenic
TAATATACAGGTGAATCAAA+AGG 0.521568 8_1:+60566599 Msa1204760:three_prime_UTR
TATGGTGGAATGGATGTTGG+TGG 0.521960 8_1:+60561754 Msa1204760:CDS
CAGCGATATTACATGATTGT+GGG 0.522512 8_1:+60566203 Msa1204760:CDS
GAGGTGGTGACTCGGGCTGG+TGG 0.529967 8_1:-60557914 None:intergenic
GCAGCGATATTACATGATTG+TGG 0.530324 8_1:+60566202 Msa1204760:CDS
CCAAATACCATGTCAACTAC+CGG 0.533480 8_1:-60562909 None:intergenic
GTTAGGGTGACGCTTCGATT+CGG 0.533924 8_1:-60558112 None:intergenic
ACAATAAGAGCAAACATTTG+CGG 0.535290 8_1:-60558299 None:intergenic
GCAAACCATGGTCACTGAGC+TGG 0.535697 8_1:+60566444 Msa1204760:three_prime_UTR
TAGCAAGTGAACATGCTACT+GGG 0.540792 8_1:-60566406 None:intergenic
GATTCATTCTCACTATGCTA+TGG 0.541146 8_1:+60561736 Msa1204760:CDS
GCATGCGGTGTTCAGCAAGC+CGG 0.541770 8_1:-60564272 None:intergenic
GAAATGAGACAGAGAGAGAA+TGG 0.545045 8_1:-60557851 None:intergenic
ATGCACAGAATATAATTGGC+CGG 0.545419 8_1:+60564253 Msa1204760:intron
CTTTACAGTCAGCATGCTGA+TGG 0.547879 8_1:+60561646 Msa1204760:CDS
ATCACTGGATAATGATATTG+TGG 0.549048 8_1:-60566497 None:intergenic
CACATTACCCACACCATCGC+CGG 0.549842 8_1:+60557979 Msa1204760:CDS
GTGCCATGAGGTGGTGACTC+GGG 0.551058 8_1:-60557921 None:intergenic
CACAATCGGATCCTGTGCGC+AGG 0.551490 8_1:+60561827 Msa1204760:CDS
GAAGAATCATAGCGTGGTGG+CGG 0.558506 8_1:-60558023 None:intergenic
TCGAGTCAGCGTCTTCCTCA+AGG 0.559738 8_1:-60557792 None:intergenic
GTAAGAGGTGCATATTGTCT+GGG 0.560931 8_1:+60563100 Msa1204760:CDS
AACCTTTCCGGTAGTTGACA+TGG 0.561389 8_1:+60562902 Msa1204760:CDS
TATCCGTTTGCAGATTGTGA+AGG 0.564116 8_1:+60562703 Msa1204760:intron
AATGGCTGGAGTTCTTGCTC+AGG 0.566629 8_1:-60566335 None:intergenic
AAATGATTCTCTCTCTAGAT+GGG 0.569000 8_1:+60564120 Msa1204760:CDS
GTTTCTCTCTGTTGAAAGGA+GGG 0.570349 8_1:-60557819 None:intergenic
TATGAGCTAAGTTTATGCTA+CGG 0.572242 8_1:+60566357 Msa1204760:exon
TGTTTCTCTCTGTTGAAAGG+AGG 0.574329 8_1:-60557820 None:intergenic
TGAAATACACACCTGCGCAC+AGG 0.582048 8_1:-60561838 None:intergenic
TGAAATGGTTCAGGAATTGG+TGG 0.582049 8_1:+60566180 Msa1204760:intron
GGAGGATTAAGATTAGGATG+AGG 0.582105 8_1:-60557957 None:intergenic
CTACTTGTGAACAGTGTGGT+AGG 0.582193 8_1:+60558357 Msa1204760:CDS
CTTGACCAGCTCAGTGACCA+TGG 0.582742 8_1:-60566449 None:intergenic
TGTGCAAAGACCATGTCTGA+CGG 0.585161 8_1:-60561808 None:intergenic
CATGGTCACTGAGCTGGTCA+AGG 0.585531 8_1:+60566450 Msa1204760:three_prime_UTR
CGGCGATGGTGTGGGTAATG+TGG 0.585560 8_1:-60557978 None:intergenic
CATGCTACTGGGGACTAATG+AGG 0.585644 8_1:-60566395 None:intergenic
TCACAACATAATGTACCTCC+AGG 0.585788 8_1:+60563495 Msa1204760:CDS
TTTGAAGGAGATACATGTTG+CGG 0.585915 8_1:+60561975 Msa1204760:CDS
TGCTATGGTGGAATGGATGT+TGG 0.586372 8_1:+60561751 Msa1204760:CDS
ACGAGGATCGAGTGCTGACG+TGG 0.588518 8_1:-60558073 None:intergenic
TACCATGTCAACTACCGGAA+AGG 0.589385 8_1:-60562904 None:intergenic
TCATTCTCACTATGCTATGG+TGG 0.589826 8_1:+60561739 Msa1204760:CDS
CCATGATACTAAGATCTCCT+CGG 0.590251 8_1:-60561684 None:intergenic
ATTGCAACTGTGACAATGAC+AGG 0.591815 8_1:+60561479 Msa1204760:CDS
AACAAATTCAACCAAATCAG+TGG 0.593686 8_1:+60563449 Msa1204760:CDS
CAGCCCGAGTCACCACCTCA+TGG 0.595284 8_1:+60557918 Msa1204760:exon
CGAGTCAGCGTCTTCCTCAA+GGG 0.597692 8_1:-60557791 None:intergenic
TAGCGTGGTGGCGGTTACGG+AGG 0.604815 8_1:-60558014 None:intergenic
CGATGGTGTGGGTAATGTGG+AGG 0.607098 8_1:-60557975 None:intergenic
CCAGCCAATTCTTTAAGGCG+AGG 0.607396 8_1:-60563763 None:intergenic
GGAGTCTCATACGAGCGTTA+GGG 0.610372 8_1:-60558128 None:intergenic
TGCAAAGACCATGTCTGACG+GGG 0.612972 8_1:-60561806 None:intergenic
GACACAGATGGAGCAACTGA+AGG 0.615542 8_1:-60563474 None:intergenic
CAATCTTTCAATCAAATCAG+CGG 0.615750 8_1:+60562731 Msa1204760:CDS
CGAGTCACCACCTCATGGCA+CGG 0.618025 8_1:+60557923 Msa1204760:exon
AATCAACTTATAACTTCCGA+AGG 0.619747 8_1:-60564307 None:intergenic
CAAGAAATGCTTCTTCCGGT+AGG 0.619929 8_1:-60562077 None:intergenic
CACTGTTCACAAGTAGAGCA+AGG 0.621366 8_1:-60558350 None:intergenic
GGTGTCGCCGGCGATGGTGT+GGG 0.622744 8_1:-60557986 None:intergenic
TACAACTTATGCATACCTAC+CGG 0.623191 8_1:+60562062 Msa1204760:CDS
TAGCAGTGGTGTCCTTGGAG+AGG 0.625789 8_1:+60561543 Msa1204760:CDS
TCAACCTGTCAAATGCACAT+TGG 0.626103 8_1:+60561456 Msa1204760:CDS
TTCATATAAACCTGTTGATG+TGG 0.628107 8_1:+60566307 Msa1204760:CDS
TATACAACAAGGCTTTGGAT+CGG 0.634892 8_1:+60558269 Msa1204760:CDS
ACATTATGTTGTGACACAGA+TGG 0.638085 8_1:-60563486 None:intergenic
AGGATATGACATCCTCTCCA+AGG 0.640200 8_1:-60561555 None:intergenic
ATGAGACAGAGAGAGAATGG+TGG 0.646219 8_1:-60557848 None:intergenic
TGAAGGAGATACATGTTGCG+GGG 0.648978 8_1:+60561977 Msa1204760:CDS
GAGTTAGTGGCCGTGCCATG+AGG 0.649163 8_1:-60557933 None:intergenic
GTGGCGGTTACGGAGGAATG+CGG 0.651422 8_1:-60558007 None:intergenic
AGAGCAATTAATGCAAACCA+TGG 0.651828 8_1:+60566432 Msa1204760:three_prime_UTR
AAGCTCGCTCTGATTTCCAA+AGG 0.652231 8_1:-60561575 None:intergenic
TTGCTCTTATTGTTGATACG+GGG 0.656841 8_1:+60558309 Msa1204760:CDS
TTAGTGGCCGTGCCATGAGG+TGG 0.657075 8_1:-60557930 None:intergenic
AGCAAGTGAACATGCTACTG+GGG 0.666247 8_1:-60566405 None:intergenic
TATACAGGTGAATCAAAAGG+TGG 0.668104 8_1:+60566602 Msa1204760:three_prime_UTR
ATAAGAGCAAACATTTGCGG+AGG 0.673966 8_1:-60558296 None:intergenic
GCAATGTAAGAAGAACAGCT+AGG 0.678502 8_1:-60566226 None:intergenic
GATCCGTGAAGCTGGCGACG+AGG 0.682000 8_1:-60558090 None:intergenic
TGTGTAGATATTATACAACA+AGG 0.686673 8_1:+60558258 Msa1204760:intron
AGGCATCAGGAAGTTGCATG+CGG 0.703204 8_1:-60564287 None:intergenic
TGCTCTACTTGTGAACAGTG+TGG 0.705783 8_1:+60558353 Msa1204760:CDS
GAGGAAGAATCATAGCGTGG+TGG 0.716889 8_1:-60558026 None:intergenic
GCAAAGACCATGTCTGACGG+GGG 0.720748 8_1:-60561805 None:intergenic
CTAGATGGGCCATAACCCCG+AGG 0.721119 8_1:+60564134 Msa1204760:CDS
ATAGAGGAAGAATCATAGCG+TGG 0.723609 8_1:-60558029 None:intergenic
GCTGAAATGAGTACTAGCAG+TGG 0.733461 8_1:+60561529 Msa1204760:CDS
TGACGTGGATGAATTAGGAG+TGG 0.736614 8_1:-60558058 None:intergenic
GTAATCAGCATATGGCCTCG+GGG 0.740741 8_1:-60564149 None:intergenic
CGTTAAGAAGAAGATCATCG+TGG 0.743458 8_1:-60558149 None:intergenic

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! ATATATATATATATATATAT+AGG + chr8_1:60559493-60559512 Msa1204760:intron 0.0%
!! TATATATATATATATATATA+GGG + chr8_1:60559492-60559511 Msa1204760:intron 0.0%
!! ATATATATATATATATATAT+GGG - chr8_1:60559493-60559512 None:intergenic 0.0%
!! TATATATATATATATATATA+TGG - chr8_1:60559492-60559511 None:intergenic 0.0%
!! ATATATATATATATATATAT+GGG - chr8_1:60559493-60559512 None:intergenic 0.0%
!! TATATATATATATATATATA+TGG - chr8_1:60559492-60559511 None:intergenic 0.0%
!! AAACATAAATCATTATAATT+TGG - chr8_1:60562764-60562783 None:intergenic 10.0%
!! AATGTAAAAATTACAATATA+AGG - chr8_1:60566651-60566670 None:intergenic 10.0%
!!! AATGAAAACCAATATATTTT+TGG + chr8_1:60557767-60557786 Msa1204760:five_prime_UTR 15.0%
!! AAAAATTTAATGGTGTAAAA+TGG + chr8_1:60558818-60558837 Msa1204760:intron 15.0%
!! CATTTATTAGACAATTATTA+GGG - chr8_1:60558930-60558949 None:intergenic 15.0%
!! TAGAAATTTAGAAGTTAAAA+TGG - chr8_1:60559089-60559108 None:intergenic 15.0%
!!! TGTAATTTTGAAAATTAGAA+AGG + chr8_1:60559271-60559290 Msa1204760:intron 15.0%
!! TGAATTAATAAATAAAACCA+CGG - chr8_1:60559995-60560014 None:intergenic 15.0%
!! TTCAAATCAATATTGTAATA+GGG - chr8_1:60561961-60561980 None:intergenic 15.0%
!! CAAATTAGAAAATAATTTGA+AGG - chr8_1:60562193-60562212 None:intergenic 15.0%
!!! TATAATGATTTATGTTTTTC+TGG + chr8_1:60562767-60562786 Msa1204760:CDS 15.0%
!! ATGATTACTTTATGATAAAT+TGG + chr8_1:60564040-60564059 Msa1204760:intron 15.0%
!!! AAAAGGTTAGTTTTTTTTAA+TGG + chr8_1:60564354-60564373 Msa1204760:intron 15.0%
!!! ACTTTGAAAATTATTATGTT+GGG - chr8_1:60565612-60565631 None:intergenic 15.0%
!!! AACTTTGAAAATTATTATGT+TGG - chr8_1:60565613-60565632 None:intergenic 15.0%
!!! ATGAATTTTGGTTATGAAAA+TGG + chr8_1:60558514-60558533 Msa1204760:intron 20.0%
!!! TGAATTTTGGTTATGAAAAT+GGG + chr8_1:60558515-60558534 Msa1204760:intron 20.0%
!! GCATTTATTAGACAATTATT+AGG - chr8_1:60558931-60558950 None:intergenic 20.0%
!! TGATTGAAGTTAATATTTGA+TGG + chr8_1:60559026-60559045 Msa1204760:intron 20.0%
!!! TTTAATTTAAGCATTTCTCA+AGG + chr8_1:60559301-60559320 Msa1204760:intron 20.0%
!! ATAGTAAAGTAGAAATAAGA+GGG - chr8_1:60559360-60559379 None:intergenic 20.0%
!! AATAGTAAAGTAGAAATAAG+AGG - chr8_1:60559361-60559380 None:intergenic 20.0%
!!! CAAATGTAATTTTCATCTAA+AGG + chr8_1:60559642-60559661 Msa1204760:intron 20.0%
!! TAATTCATTTATGTTGACAT+TGG + chr8_1:60560008-60560027 Msa1204760:intron 20.0%
!! TTGGGCAAATTAAATATAAA+GGG - chr8_1:60560412-60560431 None:intergenic 20.0%
!! TTTGGGCAAATTAAATATAA+AGG - chr8_1:60560413-60560432 None:intergenic 20.0%
!! ATTGATTATATTGTACTGTA+TGG + chr8_1:60560840-60560859 Msa1204760:intron 20.0%
!! ATGGTAAGTAAAGTTATAAT+AGG + chr8_1:60560959-60560978 Msa1204760:intron 20.0%
!!! AATAAGAGCATAAATCAAAT+GGG - chr8_1:60561234-60561253 None:intergenic 20.0%
!! CTTCAAATCAATATTGTAAT+AGG - chr8_1:60561962-60561981 None:intergenic 20.0%
!!! CTATTACAATATTGATTTGA+AGG + chr8_1:60561960-60561979 Msa1204760:CDS 20.0%
!!! ATCTTGTTAAGTTTTTTTGA+TGG + chr8_1:60562547-60562566 Msa1204760:intron 20.0%
!! GATAAAAAATTAGAGTTATC+AGG - chr8_1:60562687-60562706 None:intergenic 20.0%
!! AAATCATTATAATTTGGATC+TGG - chr8_1:60562758-60562777 None:intergenic 20.0%
!!! TAGTAATTATTTTCTAACCT+GGG - chr8_1:60563821-60563840 None:intergenic 20.0%
!!! ATAGTAATTATTTTCTAACC+TGG - chr8_1:60563822-60563841 None:intergenic 20.0%
!!! AAAAAAACTAACCTTTTTGA+TGG - chr8_1:60564351-60564370 None:intergenic 20.0%
!! TAAGAGATAAATAAGTGAAA+AGG + chr8_1:60564569-60564588 Msa1204760:intron 20.0%
!! ATAAATAAGTGAAAAGGAAA+AGG + chr8_1:60564575-60564594 Msa1204760:intron 20.0%
!! ACAAAATAGACATACATAAA+GGG - chr8_1:60565058-60565077 None:intergenic 20.0%
!!! TTTGAAGTCTTATTTTTTTC+TGG - chr8_1:60565505-60565524 None:intergenic 20.0%
!!! CTTTGAAAATTATTATGTTG+GGG - chr8_1:60565611-60565630 None:intergenic 20.0%
!!! TTTTATTTATTGGATGAGTT+GGG + chr8_1:60565823-60565842 Msa1204760:intron 20.0%
!! TTGAATATAAATTCTTACAG+AGG + chr8_1:60565963-60565982 Msa1204760:intron 20.0%
!! TTCAAAAAATGAGAAATGTT+GGG - chr8_1:60566118-60566137 None:intergenic 20.0%
!! ATTCAAAAAATGAGAAATGT+TGG - chr8_1:60566119-60566138 None:intergenic 20.0%
!! CAATATTTGGATTCTTTATT+TGG + chr8_1:60566261-60566280 Msa1204760:CDS 20.0%
!!! TCTTTATTTGGAAAAAAAGA+CGG + chr8_1:60566273-60566292 Msa1204760:CDS 20.0%
!! TTGTGAATATTGTAATATAC+AGG + chr8_1:60566587-60566606 Msa1204760:three_prime_UTR 20.0%
! TGTGTAGATATTATACAACA+AGG + chr8_1:60558258-60558277 Msa1204760:intron 25.0%
!! TTTGTTGATGTGATGAATTT+TGG + chr8_1:60558502-60558521 Msa1204760:intron 25.0%
! TATGTGTATTCCGTTAATTA+CGG + chr8_1:60558583-60558602 Msa1204760:intron 25.0%
!! TAAGGTGTTATAAGATAGTT+TGG + chr8_1:60558727-60558746 Msa1204760:intron 25.0%
! TGGTAGGAGTAAAAATTTAA+TGG + chr8_1:60558808-60558827 Msa1204760:intron 25.0%
! AATTTAATGGTGTAAAATGG+AGG + chr8_1:60558821-60558840 Msa1204760:intron 25.0%
!! GTGAAGATTGATAGTATATT+TGG + chr8_1:60558845-60558864 Msa1204760:intron 25.0%
!!! AATTTTTCGGAAAAGAAATG+CGG - chr8_1:60558960-60558979 None:intergenic 25.0%
! TCAATCACATTAAAGTAAAG+TGG - chr8_1:60559013-60559032 None:intergenic 25.0%
! AACATTTCTACTATCAGATT+TGG - chr8_1:60559059-60559078 None:intergenic 25.0%
! TAGTAAAGTAGAAATAAGAG+GGG - chr8_1:60559359-60559378 None:intergenic 25.0%
! TGCATACTTCAACTTTAATT+TGG - chr8_1:60559624-60559643 None:intergenic 25.0%
! ACTTATTTATGTTGTTCTGA+AGG + chr8_1:60560123-60560142 Msa1204760:intron 25.0%
!!! AGTTTTGGTTTTATTGGAAT+TGG + chr8_1:60560224-60560243 Msa1204760:intron 25.0%
! GCAAAGTTATAACTAAAAAG+TGG - chr8_1:60560623-60560642 None:intergenic 25.0%
! TTAAATAAAGTTGTCACAAC+AGG + chr8_1:60560778-60560797 Msa1204760:intron 25.0%
!! GAATAAGAGCATAAATCAAA+TGG - chr8_1:60561235-60561254 None:intergenic 25.0%
!! TTATTTAAAACTTGTACCGA+TGG + chr8_1:60561339-60561358 Msa1204760:intron 25.0%
! GTTAATTGTCCTATTTATCT+TGG + chr8_1:60561373-60561392 Msa1204760:intron 25.0%
! GAAACAAATCCAAGATAAAT+AGG - chr8_1:60561385-60561404 None:intergenic 25.0%
!!! TGTTTCTGTTTTACTTAAAC+AGG + chr8_1:60561399-60561418 Msa1204760:intron 25.0%
!! AATACTCTTATTGAAGCTTT+TGG + chr8_1:60562129-60562148 Msa1204760:intron 25.0%
!!! ATAGTTGGTGAATCATTTTA+CGG + chr8_1:60562334-60562353 Msa1204760:intron 25.0%
!! TTTTCCAGATGATATTTCTT+AGG + chr8_1:60562428-60562447 Msa1204760:intron 25.0%
! AATTCCTAAGAAATATCATC+TGG - chr8_1:60562435-60562454 None:intergenic 25.0%
!!! GCAATGATTTTAATAGTATG+AGG - chr8_1:60562509-60562528 None:intergenic 25.0%
! AAAATCATTGCATATAAGAC+TGG + chr8_1:60562518-60562537 Msa1204760:intron 25.0%
! AATGATCCTATATAATTACC+CGG - chr8_1:60562977-60562996 None:intergenic 25.0%
! TGGAATAATATTTCACATCA+AGG - chr8_1:60563211-60563230 None:intergenic 25.0%
! AGCTACATAACACAAAATTA+GGG - chr8_1:60563234-60563253 None:intergenic 25.0%
! TAGCTACATAACACAAAATT+AGG - chr8_1:60563235-60563254 None:intergenic 25.0%
!!! AGCAAACAAAAATTGGTTTT+TGG + chr8_1:60563349-60563368 Msa1204760:CDS 25.0%
! TTAACTATATGCGTGTATTT+AGG + chr8_1:60563885-60563904 Msa1204760:intron 25.0%
! ATGACTTGAACTTTAAACTT+AGG - chr8_1:60563956-60563975 None:intergenic 25.0%
! TTAGAAAAGTAATCAGCATA+TGG - chr8_1:60564160-60564179 None:intergenic 25.0%
! TTCTATGCACAGAATATAAT+TGG + chr8_1:60564249-60564268 Msa1204760:intron 25.0%
!!! GAAGTTATAAGTTGATTGAT+TGG + chr8_1:60564313-60564332 Msa1204760:CDS 25.0%
! ATGATATGCATATCTAATGA+AGG - chr8_1:60564408-60564427 None:intergenic 25.0%
! ATATGCAATTATGCAACAAA+TGG + chr8_1:60564438-60564457 Msa1204760:intron 25.0%
!! TTTCTTTGAAAGATAGAAGA+TGG + chr8_1:60564515-60564534 Msa1204760:intron 25.0%
! ATTCATATAAAAGTTGACTG+AGG + chr8_1:60564695-60564714 Msa1204760:intron 25.0%
! ATGAGTCATGCAAAATTAAA+TGG + chr8_1:60564749-60564768 Msa1204760:intron 25.0%
!! GATTTTTACCTCTTTATAGA+TGG + chr8_1:60564776-60564795 Msa1204760:intron 25.0%
! CACAAAATAGACATACATAA+AGG - chr8_1:60565059-60565078 None:intergenic 25.0%
!! ATATGTTTATGGCATGTTTT+TGG - chr8_1:60565145-60565164 None:intergenic 25.0%
! AAAAACATGCCATAAACATA+TGG + chr8_1:60565144-60565163 Msa1204760:intron 25.0%
!!! CTTTTATTTATTGGATGAGT+TGG + chr8_1:60565822-60565841 Msa1204760:intron 25.0%
!!! ATTAACCCGTTTTTATGAAA+TGG + chr8_1:60566165-60566184 Msa1204760:intron 25.0%
!!! CTTCTAGGATTATCAATATT+TGG + chr8_1:60566248-60566267 Msa1204760:CDS 25.0%
! TAGATATTCTATCACCATTA+AGG + chr8_1:60566555-60566574 Msa1204760:three_prime_UTR 25.0%
! CACAAACAAAAATTCCTTAA+TGG - chr8_1:60566572-60566591 None:intergenic 25.0%
! TAATATACAGGTGAATCAAA+AGG + chr8_1:60566599-60566618 Msa1204760:three_prime_UTR 25.0%
TCAAGGGACCAAAAATATAT+TGG - chr8_1:60557778-60557797 None:intergenic 30.0%
!!! AATATATTTTTGGTCCCTTG+AGG + chr8_1:60557777-60557796 Msa1204760:five_prime_UTR 30.0%
! CATTTTCAACGATATCAACT+CGG + chr8_1:60557878-60557897 Msa1204760:five_prime_UTR 30.0%
TAATGTGGAGGATTAAGATT+AGG - chr8_1:60557966-60557985 None:intergenic 30.0%
GATTAAGAAAATGCGAGTAA+CGG - chr8_1:60558189-60558208 None:intergenic 30.0%
GATATTATACAACAAGGCTT+TGG + chr8_1:60558264-60558283 Msa1204760:intron 30.0%
ACAATAAGAGCAAACATTTG+CGG - chr8_1:60558302-60558321 None:intergenic 30.0%
GTTTGCTCTTATTGTTGATA+CGG + chr8_1:60558307-60558326 Msa1204760:CDS 30.0%
TTTGCTCTTATTGTTGATAC+GGG + chr8_1:60558308-60558327 Msa1204760:CDS 30.0%
ACACATGAATCCAATAGAAA+AGG - chr8_1:60558413-60558432 None:intergenic 30.0%
GGAAATGTTTACACTTTGAT+TGG + chr8_1:60558536-60558555 Msa1204760:intron 30.0%
ATGTTTACACTTTGATTGGT+TGG + chr8_1:60558540-60558559 Msa1204760:intron 30.0%
ACTATCACTTCCGTAATTAA+CGG - chr8_1:60558596-60558615 None:intergenic 30.0%
CACTCTAACAGTAAATAGAT+AGG + chr8_1:60558619-60558638 Msa1204760:intron 30.0%
! GATAGTTTGGTATGTTGTTT+AGG + chr8_1:60558740-60558759 Msa1204760:intron 30.0%
!!! TTTGGACTTGTTTTAAGAGT+TGG + chr8_1:60558863-60558882 Msa1204760:intron 30.0%
TTTCCGAAAAATTAGACTGA+AGG + chr8_1:60558967-60558986 Msa1204760:intron 30.0%
! TCACCTTCAGTCTAATTTTT+CGG - chr8_1:60558973-60558992 None:intergenic 30.0%
AGTAAAGTAGAAATAAGAGG+GGG - chr8_1:60559358-60559377 None:intergenic 30.0%
AGACCTTCATAAAAATGAGT+GGG - chr8_1:60559543-60559562 None:intergenic 30.0%
TAGACCTTCATAAAAATGAG+TGG - chr8_1:60559544-60559563 None:intergenic 30.0%
GTATTTGTGTCCAAGTAAAA+AGG - chr8_1:60559582-60559601 None:intergenic 30.0%
GGTTGAACTAAAACATTTCA+CGG - chr8_1:60559789-60559808 None:intergenic 30.0%
AGAAGAAAGTCGAATATTTG+AGG - chr8_1:60559864-60559883 None:intergenic 30.0%
!! TCCTGTGTTTTTGAATTCAT+CGG + chr8_1:60559883-60559902 Msa1204760:intron 30.0%
ATTGTCATAGATGCTGAATA+TGG + chr8_1:60559917-60559936 Msa1204760:intron 30.0%
! TGACATTGGAAAGTTTTCTA+TGG + chr8_1:60560022-60560041 Msa1204760:intron 30.0%
ACAACATAAATAAGTGACGA+CGG - chr8_1:60560118-60560137 None:intergenic 30.0%
!! TATTTATGTTGTTCTGAAGG+AGG + chr8_1:60560126-60560145 Msa1204760:intron 30.0%
GGAATTGGATTCAATTGAAT+TGG + chr8_1:60560239-60560258 Msa1204760:intron 30.0%
TAGACCTTCATAAAATGAAG+TGG + chr8_1:60560485-60560504 Msa1204760:intron 30.0%
AGACCTTCATAAAATGAAGT+GGG + chr8_1:60560486-60560505 Msa1204760:intron 30.0%
TTGCTAAAAGACACCTTAAT+GGG - chr8_1:60560578-60560597 None:intergenic 30.0%
CTAAAAGACACCTTCATAAA+AGG + chr8_1:60560642-60560661 Msa1204760:intron 30.0%
! ATATATATGGGTTTTGCTAG+AGG - chr8_1:60560671-60560690 None:intergenic 30.0%
TGAAAGTCTTTATTGTAGTG+CGG - chr8_1:60561089-60561108 None:intergenic 30.0%
TATTGAGAAACACAACACAA+GGG - chr8_1:60561280-60561299 None:intergenic 30.0%
TCTCAATACCATCAATTTCA+TGG + chr8_1:60561292-60561311 Msa1204760:intron 30.0%
TTAACAAATGACACATCCAT+CGG - chr8_1:60561358-60561377 None:intergenic 30.0%
! TCACACATTTACTCTAGTTT+CGG + chr8_1:60561923-60561942 Msa1204760:intron 30.0%
! TGTTTTCCATCAAAAACACT+CGG - chr8_1:60562021-60562040 None:intergenic 30.0%
!! AGTGTTTTTGATGGAAAACA+TGG + chr8_1:60562021-60562040 Msa1204760:CDS 30.0%
! TTTTGATGGAAAACATGGAA+CGG + chr8_1:60562026-60562045 Msa1204760:CDS 30.0%
ATGAAAAAGTGAAACTTGTG+AGG + chr8_1:60562294-60562313 Msa1204760:intron 30.0%
! TCTGATTCACTTGTATTTTG+AGG + chr8_1:60562468-60562487 Msa1204760:intron 30.0%
GGTTTCTCTAATACTTTATG+TGG + chr8_1:60562568-60562587 Msa1204760:intron 30.0%
TAAAAAACAAACACAAAGGC+TGG - chr8_1:60562609-60562628 None:intergenic 30.0%
AGGCTAAAAAACAAACACAA+AGG - chr8_1:60562613-60562632 None:intergenic 30.0%
CAATCTTAACAGAGAAACAA+AGG - chr8_1:60562633-60562652 None:intergenic 30.0%
CAATCTTTCAATCAAATCAG+CGG + chr8_1:60562731-60562750 Msa1204760:CDS 30.0%
!! TGTCTGGGAATTTTTCAAAA+TGG + chr8_1:60563115-60563134 Msa1204760:CDS 30.0%
!! GGGAATTTTTCAAAATGGAA+AGG + chr8_1:60563120-60563139 Msa1204760:CDS 30.0%
AATGGCATAAAGTTACCAAA+AGG - chr8_1:60563178-60563197 None:intergenic 30.0%
TACATAACACAAAATTAGGG+TGG - chr8_1:60563231-60563250 None:intergenic 30.0%
!! CATACAAAACAAGAGTGTTT+CGG - chr8_1:60563323-60563342 None:intergenic 30.0%
!! GAATTTGTTGCTTCTGTATT+TGG - chr8_1:60563438-60563457 None:intergenic 30.0%
AACAAATTCAACCAAATCAG+TGG + chr8_1:60563449-60563468 Msa1204760:CDS 30.0%
! CTTTAATCGATTTAATGCAC+AGG + chr8_1:60563676-60563695 Msa1204760:intron 30.0%
!! CTATTGTTATTTCTGCGATT+TGG - chr8_1:60563708-60563727 None:intergenic 30.0%
GTTAAATGTTAATACTTCCC+AGG + chr8_1:60563801-60563820 Msa1204760:CDS 30.0%
AAGCTGTAAAATTCAGTAAG+TGG - chr8_1:60564096-60564115 None:intergenic 30.0%
! TTACTGAATTTTACAGCTTC+TGG + chr8_1:60564097-60564116 Msa1204760:CDS 30.0%
AAATGATTCTCTCTCTAGAT+GGG + chr8_1:60564120-60564139 Msa1204760:CDS 30.0%
ATTGTGCATCTTCATTTGTT+TGG + chr8_1:60564204-60564223 Msa1204760:intron 30.0%
CATAGAAATCACAGTCATAT+GGG - chr8_1:60564236-60564255 None:intergenic 30.0%
AATCAACTTATAACTTCCGA+AGG - chr8_1:60564310-60564329 None:intergenic 30.0%
! AAAACTAACCTTTTTGATGG+AGG - chr8_1:60564348-60564367 None:intergenic 30.0%
TTAGCGAATGAATACAAATG+TGG + chr8_1:60564542-60564561 Msa1204760:intron 30.0%
!! ATGTGGGTTACATCTATTTT+GGG + chr8_1:60564812-60564831 Msa1204760:intron 30.0%
ACTTATTTGAGCTTATCTAC+TGG + chr8_1:60564848-60564867 Msa1204760:intron 30.0%
! TTTAAATTTGCTTCCACCAT+AGG - chr8_1:60565185-60565204 None:intergenic 30.0%
CAACATAAAATCGTAGTCTT+CGG - chr8_1:60565263-60565282 None:intergenic 30.0%
! CGATTTTATGTTGAAAACCA+TGG + chr8_1:60565270-60565289 Msa1204760:intron 30.0%
! TTTGAAGTCTTGATGAGAAA+TGG - chr8_1:60565353-60565372 None:intergenic 30.0%
GAAATTACACATACTCATCT+TGG + chr8_1:60565750-60565769 Msa1204760:intron 30.0%
!! GTCTTCGAGCTTTTATTTAT+TGG + chr8_1:60565813-60565832 Msa1204760:intron 30.0%
!! AAACGGGTTAATATCTTAAG+TGG - chr8_1:60566157-60566176 None:intergenic 30.0%
CTGAACCATTTCATAAAAAC+GGG - chr8_1:60566173-60566192 None:intergenic 30.0%
CCTGAACCATTTCATAAAAA+CGG - chr8_1:60566174-60566193 None:intergenic 30.0%
TTATGAAATGGTTCAGGAAT+TGG + chr8_1:60566177-60566196 Msa1204760:intron 30.0%
TTCATATAAACCTGTTGATG+TGG + chr8_1:60566307-60566326 Msa1204760:CDS 30.0%
AGCATAAACTTAGCTCATAA+TGG - chr8_1:60566356-60566375 None:intergenic 30.0%
TATGAGCTAAGTTTATGCTA+CGG + chr8_1:60566357-60566376 Msa1204760:exon 30.0%
ATCACTGGATAATGATATTG+TGG - chr8_1:60566500-60566519 None:intergenic 30.0%
! TTCTTTTTGTATCTCTGTGA+GGG - chr8_1:60566530-60566549 None:intergenic 30.0%
AACATTTCTCAGTAAACAAC+AGG - chr8_1:60566682-60566701 None:intergenic 30.0%
!! CGAGTTGATATCGTTGAAAA+TGG - chr8_1:60557880-60557899 None:intergenic 35.0%
CACGATGATCTTCTTCTTAA+CGG + chr8_1:60558150-60558169 Msa1204760:CDS 35.0%
ACGATGATCTTCTTCTTAAC+GGG + chr8_1:60558151-60558170 Msa1204760:CDS 35.0%
!! TATACAACAAGGCTTTGGAT+CGG + chr8_1:60558269-60558288 Msa1204760:CDS 35.0%
TTGCTCTTATTGTTGATACG+GGG + chr8_1:60558309-60558328 Msa1204760:CDS 35.0%
!!! CGTTTTTTCGCCTTTTCTAT+TGG + chr8_1:60558400-60558419 Msa1204760:intron 35.0%
TGACTCTGTGTATTTGCAAA+TGG + chr8_1:60558441-60558460 Msa1204760:intron 35.0%
AACGGAATACACATAAGCAT+TGG - chr8_1:60558578-60558597 None:intergenic 35.0%
! AAATGCAGCACATTTTTCTC+TGG + chr8_1:60559239-60559258 Msa1204760:intron 35.0%
!! AGCACATTTTTCTCTGGAAA+AGG + chr8_1:60559245-60559264 Msa1204760:intron 35.0%
!! GCACATTTTTCTCTGGAAAA+GGG + chr8_1:60559246-60559265 Msa1204760:intron 35.0%
!! AGACCCACTCATTTTTATGA+AGG + chr8_1:60559537-60559556 Msa1204760:intron 35.0%
!!! ATACCCTTGGTTTTGTGTTT+TGG + chr8_1:60559598-60559617 Msa1204760:intron 35.0%
AAGGAAGAAAGAGAATGAAG+GGG - chr8_1:60559705-60559724 None:intergenic 35.0%
GAAGGAAGAAAGAGAATGAA+GGG - chr8_1:60559706-60559725 None:intergenic 35.0%
GTAACGAAACTTAGTGAAAG+TGG - chr8_1:60559752-60559771 None:intergenic 35.0%
TGAACTAAAACATTTCACGG+CGG - chr8_1:60559786-60559805 None:intergenic 35.0%
TGTTTGCCTTCAATTCTTCA+TGG + chr8_1:60559823-60559842 Msa1204760:intron 35.0%
GTTTGCCTTCAATTCTTCAT+GGG + chr8_1:60559824-60559843 Msa1204760:intron 35.0%
ACCGATGAATTCAAAAACAC+AGG - chr8_1:60559887-60559906 None:intergenic 35.0%
TCAGCATCTATGACAATCTA+TGG - chr8_1:60559914-60559933 None:intergenic 35.0%
TCATAGATGCTGAATATGGT+TGG + chr8_1:60559921-60559940 Msa1204760:intron 35.0%
TCTTATTCATCTCTTAACCG+TGG + chr8_1:60559975-60559994 Msa1204760:intron 35.0%
!!! GAAGCGAGTTTTGGTTTTAT+TGG + chr8_1:60560218-60560237 Msa1204760:intron 35.0%
!! AGAATGACCTTTAGAGTTCT+CGG + chr8_1:60560338-60560357 Msa1204760:intron 35.0%
TTGCCCAAAAAACAAAACCA+AGG + chr8_1:60560424-60560443 Msa1204760:intron 35.0%
TGCCCAAAAAACAAAACCAA+GGG + chr8_1:60560425-60560444 Msa1204760:intron 35.0%
!!! GACCCTTGGTTTTGTTTTTT+GGG - chr8_1:60560430-60560449 None:intergenic 35.0%
!!! AGACCCTTGGTTTTGTTTTT+TGG - chr8_1:60560431-60560450 None:intergenic 35.0%
! AGACCCACTTCATTTTATGA+AGG - chr8_1:60560492-60560511 None:intergenic 35.0%
GTTGCTAAAAGACACCTTAA+TGG - chr8_1:60560579-60560598 None:intergenic 35.0%
AGGATTTCAAGGTCTTGAAT+AGG - chr8_1:60561043-60561062 None:intergenic 35.0%
TATTCAAGACCTTGAAATCC+TGG + chr8_1:60561042-60561061 Msa1204760:intron 35.0%
ATTCAAGACCTTGAAATCCT+GGG + chr8_1:60561043-60561062 Msa1204760:intron 35.0%
GTATTGAGAAACACAACACA+AGG - chr8_1:60561281-60561300 None:intergenic 35.0%
CAATACCATCAATTTCATGG+TGG + chr8_1:60561295-60561314 Msa1204760:intron 35.0%
GATTCATTCTCACTATGCTA+TGG + chr8_1:60561736-60561755 Msa1204760:CDS 35.0%
! CACACATTTACTCTAGTTTC+GGG + chr8_1:60561924-60561943 Msa1204760:intron 35.0%
! ACACATTTACTCTAGTTTCG+GGG + chr8_1:60561925-60561944 Msa1204760:intron 35.0%
TTTGAAGGAGATACATGTTG+CGG + chr8_1:60561975-60561994 Msa1204760:CDS 35.0%
! GTTTTCCATCAAAAACACTC+GGG - chr8_1:60562020-60562039 None:intergenic 35.0%
TACAACTTATGCATACCTAC+CGG + chr8_1:60562062-60562081 Msa1204760:CDS 35.0%
AATGCAAGAAATGCTTCTTC+CGG - chr8_1:60562084-60562103 None:intergenic 35.0%
!! ATTTGAAGGTGCCAACAAAA+TGG - chr8_1:60562179-60562198 None:intergenic 35.0%
! TATTGCTGTTGAACACATTG+CGG + chr8_1:60562357-60562376 Msa1204760:intron 35.0%
AAGGCATAAGTGCAATTGAA+GGG + chr8_1:60562387-60562406 Msa1204760:intron 35.0%
GAGTTATCAGGTCAATACAA+AGG - chr8_1:60562675-60562694 None:intergenic 35.0%
!! GATTTATGTTTTTCTGGTGC+TGG + chr8_1:60562773-60562792 Msa1204760:CDS 35.0%
TGTGACACATCACTGAAATA+CGG - chr8_1:60562873-60562892 None:intergenic 35.0%
!! ACAACTCTCTAAAACCTTTC+CGG + chr8_1:60562890-60562909 Msa1204760:CDS 35.0%
GTTGACATGGTATTTGGAAA+TGG + chr8_1:60562915-60562934 Msa1204760:CDS 35.0%
CACCTGAAAATTACATGTTC+CGG + chr8_1:60562955-60562974 Msa1204760:CDS 35.0%
ACCTGAAAATTACATGTTCC+GGG + chr8_1:60562956-60562975 Msa1204760:CDS 35.0%
CATGTTCCGGGTAATTATAT+AGG + chr8_1:60562968-60562987 Msa1204760:intron 35.0%
ATTACACCAGTCTCTAAACA+CGG - chr8_1:60563011-60563030 None:intergenic 35.0%
!! TTCATTATCCCTACTTTTCG+TGG + chr8_1:60563051-60563070 Msa1204760:intron 35.0%
!! TCATTATCCCTACTTTTCGT+GGG + chr8_1:60563052-60563071 Msa1204760:intron 35.0%
AAATTTCCCCACGAAAAGTA+GGG - chr8_1:60563062-60563081 None:intergenic 35.0%
AAAATTTCCCCACGAAAAGT+AGG - chr8_1:60563063-60563082 None:intergenic 35.0%
! GTGAAGCATTCAAAAGTAAG+AGG + chr8_1:60563085-60563104 Msa1204760:intron 35.0%
! AAGGATCCAACTACTCTTTT+AGG + chr8_1:60563139-60563158 Msa1204760:CDS 35.0%
TTACCTCCTAAAAGAGTAGT+TGG - chr8_1:60563148-60563167 None:intergenic 35.0%
CATCAAGGCAAAACATGAAA+TGG - chr8_1:60563196-60563215 None:intergenic 35.0%
! TTTGTTGCTTCTGTATTTGG+AGG - chr8_1:60563435-60563454 None:intergenic 35.0%
ACATTATGTTGTGACACAGA+TGG - chr8_1:60563489-60563508 None:intergenic 35.0%
AAAGCATGATGCACATATAC+AGG - chr8_1:60564020-60564039 None:intergenic 35.0%
AAATTCAGTAAGTGGATCTG+TGG - chr8_1:60564088-60564107 None:intergenic 35.0%
GAAATGATTCTCTCTCTAGA+TGG + chr8_1:60564119-60564138 Msa1204760:CDS 35.0%
! CTTTTCTAAGTCAACTGCAA+TGG + chr8_1:60564171-60564190 Msa1204760:CDS 35.0%
GCATAGAAATCACAGTCATA+TGG - chr8_1:60564237-60564256 None:intergenic 35.0%
ATGCACAGAATATAATTGGC+CGG + chr8_1:60564253-60564272 Msa1204760:intron 35.0%
ATGTTATGCCTCCATCAAAA+AGG + chr8_1:60564337-60564356 Msa1204760:CDS 35.0%
ATGGAGAAATGTCTTACACT+TGG + chr8_1:60564373-60564392 Msa1204760:intron 35.0%
AAAGTTGACTGAGGTGTAAT+TGG + chr8_1:60564704-60564723 Msa1204760:intron 35.0%
TAGATGTAACCCACATGTAA+GGG - chr8_1:60564808-60564827 None:intergenic 35.0%
ATAGATGTAACCCACATGTA+AGG - chr8_1:60564809-60564828 None:intergenic 35.0%
!! CATGTGGGTTACATCTATTT+TGG + chr8_1:60564811-60564830 Msa1204760:intron 35.0%
! TGCCTTAAGTTGCAAATAAG+CGG + chr8_1:60565018-60565037 Msa1204760:intron 35.0%
AACCGCTTATTTGCAACTTA+AGG - chr8_1:60565023-60565042 None:intergenic 35.0%
AATAAGCGGTTTATCCAAAC+AGG + chr8_1:60565032-60565051 Msa1204760:intron 35.0%
! GTACTCTGTGTTTTCATTGA+TGG + chr8_1:60565098-60565117 Msa1204760:intron 35.0%
! TCTGTGTTTTCATTGATGGA+TGG + chr8_1:60565102-60565121 Msa1204760:intron 35.0%
AACATGCCATAAACATATGG+CGG + chr8_1:60565147-60565166 Msa1204760:intron 35.0%
!!! TCTGCTGTATTTGTTTTGTG+CGG - chr8_1:60565227-60565246 None:intergenic 35.0%
TCCTATAAGTACAACTCAGT+TGG + chr8_1:60565379-60565398 Msa1204760:intron 35.0%
ACCAACTGAGTTGTACTTAT+AGG - chr8_1:60565383-60565402 None:intergenic 35.0%
! TTTCTGGTCAAGTAGCATAT+TGG - chr8_1:60565489-60565508 None:intergenic 35.0%
AAATTATTATGTTGGGGCTG+CGG - chr8_1:60565605-60565624 None:intergenic 35.0%
!! TTTTGAGTCGTGACAATAAG+TGG + chr8_1:60565727-60565746 Msa1204760:intron 35.0%
TTTGAGTCGTGACAATAAGT+GGG + chr8_1:60565728-60565747 Msa1204760:intron 35.0%
TTACACATACTCATCTTGGA+TGG + chr8_1:60565754-60565773 Msa1204760:intron 35.0%
GTTTATCTATAGGTAGTTCC+AGG + chr8_1:60565853-60565872 Msa1204760:intron 35.0%
ATGATGACATGGCAATAGAA+AGG - chr8_1:60565913-60565932 None:intergenic 35.0%
TTCTATTGCCATGTCATCAT+TGG + chr8_1:60565913-60565932 Msa1204760:intron 35.0%
ACAATACATGTACAAGGTTG+TGG - chr8_1:60566049-60566068 None:intergenic 35.0%
GTGCAAACAATACATGTACA+AGG - chr8_1:60566055-60566074 None:intergenic 35.0%
!! CCGTTTTTATGAAATGGTTC+AGG + chr8_1:60566171-60566190 Msa1204760:intron 35.0%
CAGCGATATTACATGATTGT+GGG + chr8_1:60566203-60566222 Msa1204760:CDS 35.0%
GTTCTTCTTACATTGCTTCT+AGG + chr8_1:60566233-60566252 Msa1204760:CDS 35.0%
TAAACTTAGCTCATAATGGC+TGG - chr8_1:60566352-60566371 None:intergenic 35.0%
AGAGCAATTAATGCAAACCA+TGG + chr8_1:60566432-60566451 Msa1204760:three_prime_UTR 35.0%
! GTTCTTTTTGTATCTCTGTG+AGG - chr8_1:60566531-60566550 None:intergenic 35.0%
TATACAGGTGAATCAAAAGG+TGG + chr8_1:60566602-60566621 Msa1204760:three_prime_UTR 35.0%
GTTTCTCTCTGTTGAAAGGA+GGG - chr8_1:60557822-60557841 None:intergenic 40.0%
TGTTTCTCTCTGTTGAAAGG+AGG - chr8_1:60557823-60557842 None:intergenic 40.0%
GTGTGTTTCTCTCTGTTGAA+AGG - chr8_1:60557826-60557845 None:intergenic 40.0%
GAAATGAGACAGAGAGAGAA+TGG - chr8_1:60557854-60557873 None:intergenic 40.0%
ATTAGGATGAGGTGAGTTAG+TGG - chr8_1:60557949-60557968 None:intergenic 40.0%
GGAGGATTAAGATTAGGATG+AGG - chr8_1:60557960-60557979 None:intergenic 40.0%
ATAGAGGAAGAATCATAGCG+TGG - chr8_1:60558032-60558051 None:intergenic 40.0%
TTAGGAGTGGTTAGGTATAG+AGG - chr8_1:60558048-60558067 None:intergenic 40.0%
TGGATGAATTAGGAGTGGTT+AGG - chr8_1:60558056-60558075 None:intergenic 40.0%
CGTTAAGAAGAAGATCATCG+TGG - chr8_1:60558152-60558171 None:intergenic 40.0%
! AAATGCGAGTAACGGAAAGA+AGG - chr8_1:60558181-60558200 None:intergenic 40.0%
ATAAGAGCAAACATTTGCGG+AGG - chr8_1:60558299-60558318 None:intergenic 40.0%
! ATGAAAGTACGTGCATAGCT+AGG + chr8_1:60558694-60558713 Msa1204760:intron 40.0%
TAGCTAGGAACTATGCACTA+AGG + chr8_1:60558709-60558728 Msa1204760:intron 40.0%
GCTAGAAACGAGTCTCATAA+TGG - chr8_1:60559178-60559197 None:intergenic 40.0%
ACACCCTCAATGTAGTAGAT+AGG + chr8_1:60559397-60559416 Msa1204760:intron 40.0%
CACCCTCAATGTAGTAGATA+GGG + chr8_1:60559398-60559417 Msa1204760:intron 40.0%
TGCCCTATCTACTACATTGA+GGG - chr8_1:60559403-60559422 None:intergenic 40.0%
! GCAACCAACACCTTTTTACT+TGG + chr8_1:60559569-60559588 Msa1204760:intron 40.0%
! GTGTCCAAGTAAAAAGGTGT+TGG - chr8_1:60559576-60559595 None:intergenic 40.0%
TACTTGGACACAAATACCCT+TGG + chr8_1:60559585-60559604 Msa1204760:intron 40.0%
TGGCCAAAACACAAAACCAA+GGG - chr8_1:60559604-60559623 None:intergenic 40.0%
TTGGCCAAAACACAAAACCA+AGG - chr8_1:60559605-60559624 None:intergenic 40.0%
AGGAAGAAAGAGAATGAAGG+GGG - chr8_1:60559704-60559723 None:intergenic 40.0%
GGAAGGAAGAAAGAGAATGA+AGG - chr8_1:60559707-60559726 None:intergenic 40.0%
! TGAGAGAAGAGGTATAACGA+CGG - chr8_1:60559729-60559748 None:intergenic 40.0%
! GAATATTTGAGGTGTGACGA+TGG - chr8_1:60559853-60559872 None:intergenic 40.0%
!! TTCAAGTTTTGGCCTGTTAG+AGG - chr8_1:60560196-60560215 None:intergenic 40.0%
CTAACAGGCCAAAACTTGAA+TGG + chr8_1:60560196-60560215 Msa1204760:intron 40.0%
!! ACTCGCTTCCATTCAAGTTT+TGG - chr8_1:60560207-60560226 None:intergenic 40.0%
! ACTTGAATGGAAGCGAGTTT+TGG + chr8_1:60560209-60560228 Msa1204760:intron 40.0%
!! GAATGACCTTTAGAGTTCTC+GGG + chr8_1:60560339-60560358 Msa1204760:intron 40.0%
TTTCTTCCCGAGAACTCTAA+AGG - chr8_1:60560348-60560367 None:intergenic 40.0%
CTAAAAGACACCTTAATGGG+TGG - chr8_1:60560575-60560594 None:intergenic 40.0%
AAAGTGGAAATCACACCTTG+AGG - chr8_1:60560607-60560626 None:intergenic 40.0%
! CTAGAGGACACCTTTTATGA+AGG - chr8_1:60560655-60560674 None:intergenic 40.0%
GACAGGGCATATATGATAAG+AGG + chr8_1:60560740-60560759 Msa1204760:intron 40.0%
! GTGTGTGTGAAGTGTTACAT+GGG - chr8_1:60560912-60560931 None:intergenic 40.0%
! TGTGTGTGTGAAGTGTTACA+TGG - chr8_1:60560913-60560932 None:intergenic 40.0%
TAAACAAAGTCAATGGACCC+AGG - chr8_1:60561063-60561082 None:intergenic 40.0%
!! GGGTCCATTGACTTTGTTTA+AGG + chr8_1:60561063-60561082 Msa1204760:intron 40.0%
CTCTTCCACCATGAAATTGA+TGG - chr8_1:60561303-60561322 None:intergenic 40.0%
GTGGAAGAGATGCAAAAGAA+TGG + chr8_1:60561314-60561333 Msa1204760:intron 40.0%
!! TGTGCATTTGACAGGTTGAT+AGG - chr8_1:60561455-60561474 None:intergenic 40.0%
TCAACCTGTCAAATGCACAT+TGG + chr8_1:60561456-60561475 Msa1204760:CDS 40.0%
CAATCCAATGTGCATTTGAC+AGG - chr8_1:60561463-60561482 None:intergenic 40.0%
ATTGCAACTGTGACAATGAC+AGG + chr8_1:60561479-60561498 Msa1204760:CDS 40.0%
GGTTGTGAAAATGTTGAGAC+TGG + chr8_1:60561619-60561638 Msa1204760:CDS 40.0%
CCATGATACTAAGATCTCCT+CGG - chr8_1:60561687-60561706 None:intergenic 40.0%
TCTTAGTATCATGGATCAGC+TGG + chr8_1:60561693-60561712 Msa1204760:CDS 40.0%
TCATTCTCACTATGCTATGG+TGG + chr8_1:60561739-60561758 Msa1204760:CDS 40.0%
AGACATGGTCTTTGCACAAT+CGG + chr8_1:60561813-60561832 Msa1204760:CDS 40.0%
TTGAAGGAGATACATGTTGC+GGG + chr8_1:60561976-60561995 Msa1204760:CDS 40.0%
TCAAAAACACTCGGGTTTAG+AGG - chr8_1:60562012-60562031 None:intergenic 40.0%
!! CTAAACCCGAGTGTTTTTGA+TGG + chr8_1:60562012-60562031 Msa1204760:CDS 40.0%
!!! AATCTCACCTGCCATTTTGT+TGG + chr8_1:60562165-60562184 Msa1204760:intron 40.0%
CCAACTATAGCATGTAGAAG+TGG - chr8_1:60562322-60562341 None:intergenic 40.0%
CCACTTCTACATGCTATAGT+TGG + chr8_1:60562319-60562338 Msa1204760:intron 40.0%
CTTCAATTGCACTTATGCCT+TGG - chr8_1:60562388-60562407 None:intergenic 40.0%
CAAGGCATAAGTGCAATTGA+AGG + chr8_1:60562386-60562405 Msa1204760:intron 40.0%
CTCTGTTAAGATTGATGCTG+AGG + chr8_1:60562639-60562658 Msa1204760:intron 40.0%
TATCCGTTTGCAGATTGTGA+AGG + chr8_1:60562703-60562722 Msa1204760:intron 40.0%
GTTCCTTCACAATCTGCAAA+CGG - chr8_1:60562709-60562728 None:intergenic 40.0%
GTGACACATCACTGAAATAC+GGG - chr8_1:60562872-60562891 None:intergenic 40.0%
CCAAATACCATGTCAACTAC+CGG - chr8_1:60562912-60562931 None:intergenic 40.0%
! ACCCGGAACATGTAATTTTC+AGG - chr8_1:60562960-60562979 None:intergenic 40.0%
GTTTAACCGTGTTTAGAGAC+TGG + chr8_1:60563002-60563021 Msa1204760:intron 40.0%
!! CATTATCCCTACTTTTCGTG+GGG + chr8_1:60563053-60563072 Msa1204760:intron 40.0%
! AGTAAGAGGTGCATATTGTC+TGG + chr8_1:60563099-60563118 Msa1204760:CDS 40.0%
! GTAAGAGGTGCATATTGTCT+GGG + chr8_1:60563100-60563119 Msa1204760:CDS 40.0%
! GATCCAACTACTCTTTTAGG+AGG + chr8_1:60563142-60563161 Msa1204760:CDS 40.0%
! GGAGGTAACTTCATTCCTTT+TGG + chr8_1:60563160-60563179 Msa1204760:intron 40.0%
! GTAGCTAGCTTCTATGAGAT+AGG + chr8_1:60563248-60563267 Msa1204760:intron 40.0%
CCTGGGCAAAAAAATGACAT+CGG - chr8_1:60563291-60563310 None:intergenic 40.0%
GATCGCGAGCAAACAAAAAT+TGG + chr8_1:60563342-60563361 Msa1204760:CDS 40.0%
AAACCAACTGTGCTGAGTTA+TGG + chr8_1:60563373-60563392 Msa1204760:CDS 40.0%
AACCAACTGTGCTGAGTTAT+GGG + chr8_1:60563374-60563393 Msa1204760:CDS 40.0%
! AACTGAAGGATCCACTGATT+TGG - chr8_1:60563463-60563482 None:intergenic 40.0%
TCACAACATAATGTACCTCC+AGG + chr8_1:60563495-60563514 Msa1204760:CDS 40.0%
GAGAAGTTTATCATACCTGG+AGG - chr8_1:60563513-60563532 None:intergenic 40.0%
GACGAGAAGTTTATCATACC+TGG - chr8_1:60563516-60563535 None:intergenic 40.0%
TGAGTCCAGCCAATTCTTTA+AGG - chr8_1:60563771-60563790 None:intergenic 40.0%
! TTAGGGTGGGTTTCAAATTG+TGG + chr8_1:60563923-60563942 Msa1204760:intron 40.0%
AAGTAATCAGCATATGGCCT+CGG - chr8_1:60564154-60564173 None:intergenic 40.0%
!! TTATAACTTCCGAAGGCATC+AGG - chr8_1:60564303-60564322 None:intergenic 40.0%
AAGTGAAAAGGAAAAGGCAG+TGG + chr8_1:60564581-60564600 Msa1204760:intron 40.0%
AAGGAAAAGGCAGTGGAATA+AGG + chr8_1:60564588-60564607 Msa1204760:intron 40.0%
GGGCATATCCATCTATAAAG+AGG - chr8_1:60564787-60564806 None:intergenic 40.0%
AGATGTAACCCACATGTAAG+GGG - chr8_1:60564807-60564826 None:intergenic 40.0%
!! CTGGCATAAGTTTTGTGAGA+CGG + chr8_1:60564867-60564886 Msa1204760:intron 40.0%
ACATACATAAAGGGCCTGTT+TGG - chr8_1:60565049-60565068 None:intergenic 40.0%
CACAGAGTACAGTCTAAGTA+AGG - chr8_1:60565088-60565107 None:intergenic 40.0%
! CATTGATGGATGGCAGATTA+TGG + chr8_1:60565112-60565131 Msa1204760:intron 40.0%
!!! CTGCTGTATTTGTTTTGTGC+GGG - chr8_1:60565226-60565245 None:intergenic 40.0%
GTGTCTATCAATCAAGTCCA+TGG - chr8_1:60565290-60565309 None:intergenic 40.0%
!! AAGCTCGAAGACTTTGAAGT+AGG - chr8_1:60565805-60565824 None:intergenic 40.0%
! TTATTGGATGAGTTGGGCTA+TGG + chr8_1:60565829-60565848 Msa1204760:intron 40.0%
! TATTGGATGAGTTGGGCTAT+GGG + chr8_1:60565830-60565849 Msa1204760:intron 40.0%
AAAGTGTAAGGGTTGTAACC+TGG - chr8_1:60565874-60565893 None:intergenic 40.0%
AGGTTACAACCCTTACACTT+TGG + chr8_1:60565873-60565892 Msa1204760:intron 40.0%
GGTTACAACCCTTACACTTT+GGG + chr8_1:60565874-60565893 Msa1204760:intron 40.0%
GTTACAACCCTTACACTTTG+GGG + chr8_1:60565875-60565894 Msa1204760:intron 40.0%
!! TCTTACAGAGGCATTCGATT+AGG + chr8_1:60565975-60565994 Msa1204760:intron 40.0%
TGAAATGGTTCAGGAATTGG+TGG + chr8_1:60566180-60566199 Msa1204760:intron 40.0%
GCAGCGATATTACATGATTG+TGG + chr8_1:60566202-60566221 Msa1204760:CDS 40.0%
GCAATGTAAGAAGAACAGCT+AGG - chr8_1:60566229-60566248 None:intergenic 40.0%
TAGCAAGTGAACATGCTACT+GGG - chr8_1:60566409-60566428 None:intergenic 40.0%
ATAGCAAGTGAACATGCTAC+TGG - chr8_1:60566410-60566429 None:intergenic 40.0%
TGTGAGGGTTCAATAATCAC+TGG - chr8_1:60566515-60566534 None:intergenic 40.0%
ATGAGACAGAGAGAGAATGG+TGG - chr8_1:60557851-60557870 None:intergenic 45.0%
TGACGTGGATGAATTAGGAG+TGG - chr8_1:60558061-60558080 None:intergenic 45.0%
!! AGTGCTGACGTGGATGAATT+AGG - chr8_1:60558066-60558085 None:intergenic 45.0%
CACTGTTCACAAGTAGAGCA+AGG - chr8_1:60558353-60558372 None:intergenic 45.0%
TGCTCTACTTGTGAACAGTG+TGG + chr8_1:60558353-60558372 Msa1204760:CDS 45.0%
CTACTTGTGAACAGTGTGGT+AGG + chr8_1:60558357-60558376 Msa1204760:CDS 45.0%
CTGCCCTATCTACTACATTG+AGG - chr8_1:60559404-60559423 None:intergenic 45.0%
CTCAATGTAGTAGATAGGGC+AGG + chr8_1:60559402-60559421 Msa1204760:intron 45.0%
ATGTAGTAGATAGGGCAGGA+AGG + chr8_1:60559406-60559425 Msa1204760:intron 45.0%
! GAGAGAAGAGGTATAACGAC+GGG - chr8_1:60559728-60559747 None:intergenic 45.0%
AGTGAAAGTGGTGAGAGAAG+AGG - chr8_1:60559740-60559759 None:intergenic 45.0%
CTAAGTTTCGTTACCAGAGC+CGG + chr8_1:60559758-60559777 Msa1204760:intron 45.0%
GCAAACACGTTTCAGATCAG+AGG - chr8_1:60559810-60559829 None:intergenic 45.0%
!! AAGTTTTGGCCTGTTAGAGG+TGG - chr8_1:60560193-60560212 None:intergenic 45.0%
GTCTTTGTGTCCAAGTGACA+AGG + chr8_1:60560447-60560466 Msa1204760:intron 45.0%
TTGCTAGAAGCCACCCATTA+AGG + chr8_1:60560562-60560581 Msa1204760:intron 45.0%
! TTTTAGCAACCCACACCTCA+AGG + chr8_1:60560589-60560608 Msa1204760:intron 45.0%
GAAATCACACCTTGAGGTGT+GGG - chr8_1:60560601-60560620 None:intergenic 45.0%
! CACACGCACAAAAGTGTATC+AGG + chr8_1:60560929-60560948 Msa1204760:intron 45.0%
AAGTGTATCAGGTGAGTGCA+TGG + chr8_1:60560940-60560959 Msa1204760:intron 45.0%
TCAATGGACCCAGGATTTCA+AGG - chr8_1:60561054-60561073 None:intergenic 45.0%
GCGGCCTTAAACAAAGTCAA+TGG - chr8_1:60561070-60561089 None:intergenic 45.0%
GACAAGTCTGGCTGAAACTT+CGG - chr8_1:60561427-60561446 None:intergenic 45.0%
TGATAGGTGCTTGACAAGTC+TGG - chr8_1:60561439-60561458 None:intergenic 45.0%
GCTGAAATGAGTACTAGCAG+TGG + chr8_1:60561529-60561548 Msa1204760:CDS 45.0%
AGGATATGACATCCTCTCCA+AGG - chr8_1:60561558-60561577 None:intergenic 45.0%
GGAGAGGATGTCATATCCTT+TGG + chr8_1:60561559-60561578 Msa1204760:CDS 45.0%
AAGCTCGCTCTGATTTCCAA+AGG - chr8_1:60561578-60561597 None:intergenic 45.0%
CTTTACAGTCAGCATGCTGA+TGG + chr8_1:60561646-60561665 Msa1204760:CDS 45.0%
TCAGCATGCTGATGGCATTA+TGG + chr8_1:60561654-60561673 Msa1204760:CDS 45.0%
CAGCATGCTGATGGCATTAT+GGG + chr8_1:60561655-60561674 Msa1204760:CDS 45.0%
TGCTGATGGCATTATGGGTT+TGG + chr8_1:60561660-60561679 Msa1204760:CDS 45.0%
GCTGATGGCATTATGGGTTT+GGG + chr8_1:60561661-60561680 Msa1204760:CDS 45.0%
CCGAGGAGATCTTAGTATCA+TGG + chr8_1:60561684-60561703 Msa1204760:CDS 45.0%
! CTCACTATGCTATGGTGGAA+TGG + chr8_1:60561744-60561763 Msa1204760:CDS 45.0%
! TGCTATGGTGGAATGGATGT+TGG + chr8_1:60561751-60561770 Msa1204760:CDS 45.0%
! TATGGTGGAATGGATGTTGG+TGG + chr8_1:60561754-60561773 Msa1204760:CDS 45.0%
! ATGGTGGAATGGATGTTGGT+GGG + chr8_1:60561755-60561774 Msa1204760:CDS 45.0%
TGTGCAAAGACCATGTCTGA+CGG - chr8_1:60561811-60561830 None:intergenic 45.0%
! CATTTACTCTAGTTTCGGGG+TGG + chr8_1:60561928-60561947 Msa1204760:intron 45.0%
TGAAGGAGATACATGTTGCG+GGG + chr8_1:60561977-60561996 Msa1204760:CDS 45.0%
TGGAAAACATGGAACGGTCT+TGG + chr8_1:60562032-60562051 Msa1204760:CDS 45.0%
CAAGAAATGCTTCTTCCGGT+AGG - chr8_1:60562080-60562099 None:intergenic 45.0%
GAGTCTCGTGTTATCATGCA+TGG + chr8_1:60562214-60562233 Msa1204760:intron 45.0%
ATTGCACTTATGCCTTGGCA+AGG - chr8_1:60562383-60562402 None:intergenic 45.0%
AACCTTTCCGGTAGTTGACA+TGG + chr8_1:60562902-60562921 Msa1204760:CDS 45.0%
TACCATGTCAACTACCGGAA+AGG - chr8_1:60562907-60562926 None:intergenic 45.0%
CCGGTAGTTGACATGGTATT+TGG + chr8_1:60562909-60562928 Msa1204760:CDS 45.0%
!!! CCGATGTCATTTTTTTGCCC+AGG + chr8_1:60563288-60563307 Msa1204760:intron 45.0%
!! TATTTGGAGGCATTGGTGGT+GGG - chr8_1:60563422-60563441 None:intergenic 45.0%
!! TCTGTATTTGGAGGCATTGG+TGG - chr8_1:60563426-60563445 None:intergenic 45.0%
! GCTTCTGTATTTGGAGGCAT+TGG - chr8_1:60563429-60563448 None:intergenic 45.0%
AGAGACATCATCTCGTAACG+TGG + chr8_1:60563555-60563574 Msa1204760:intron 45.0%
GAAGCCTCGCCTTAAAGAAT+TGG + chr8_1:60563759-60563778 Msa1204760:CDS 45.0%
TATGCGTGTATTTAGGCAGC+TGG + chr8_1:60563892-60563911 Msa1204760:intron 45.0%
AGTAATCAGCATATGGCCTC+GGG - chr8_1:60564153-60564172 None:intergenic 45.0%
ATGCAACTTCCTGATGCCTT+CGG + chr8_1:60564291-60564310 Msa1204760:CDS 45.0%
AAAAGGCAGTGGAATAAGGC+TGG + chr8_1:60564592-60564611 Msa1204760:intron 45.0%
TGAGGTGTAATTGGAGCAAG+AGG + chr8_1:60564713-60564732 Msa1204760:intron 45.0%
GAGGTGTAATTGGAGCAAGA+GGG + chr8_1:60564714-60564733 Msa1204760:intron 45.0%
ATGGATATGCCCCTTACATG+TGG + chr8_1:60564795-60564814 Msa1204760:intron 45.0%
TGGATATGCCCCTTACATGT+GGG + chr8_1:60564796-60564815 Msa1204760:intron 45.0%
! TGATGGATGGCAGATTATGG+TGG + chr8_1:60565115-60565134 Msa1204760:intron 45.0%
! TGCCATAAACATATGGCGGA+TGG + chr8_1:60565151-60565170 Msa1204760:intron 45.0%
TGCCATCCGCCATATGTTTA+TGG - chr8_1:60565156-60565175 None:intergenic 45.0%
!! ACATATGGCGGATGGCATAA+CGG + chr8_1:60565159-60565178 Msa1204760:intron 45.0%
GGACAATAATATGCATGCGC+CGG + chr8_1:60565411-60565430 Msa1204760:intron 45.0%
GACAATAATATGCATGCGCC+GGG + chr8_1:60565412-60565431 Msa1204760:intron 45.0%
ACAATAATATGCATGCGCCG+GGG + chr8_1:60565413-60565432 Msa1204760:intron 45.0%
ACTTTAAGCGTGGAGAAGTG+GGG - chr8_1:60565454-60565473 None:intergenic 45.0%
CACTTTAAGCGTGGAGAAGT+GGG - chr8_1:60565455-60565474 None:intergenic 45.0%
ACACTTTAAGCGTGGAGAAG+TGG - chr8_1:60565456-60565475 None:intergenic 45.0%
GGATTCACACACTTTAAGCG+TGG - chr8_1:60565464-60565483 None:intergenic 45.0%
TGGTCAAGTAGCATATTGGC+TGG - chr8_1:60565485-60565504 None:intergenic 45.0%
! ATTGGATGAGTTGGGCTATG+GGG + chr8_1:60565831-60565850 Msa1204760:intron 45.0%
GGGCTATGGGGTTTATCTAT+AGG + chr8_1:60565843-60565862 Msa1204760:intron 45.0%
ACATTCGCCCCAAAGTGTAA+GGG - chr8_1:60565885-60565904 None:intergenic 45.0%
AACATTCGCCCCAAAGTGTA+AGG - chr8_1:60565886-60565905 None:intergenic 45.0%
CTATCGCTCCAATGATGACA+TGG - chr8_1:60565924-60565943 None:intergenic 45.0%
! TGGAGCGATAGAAGTGTATG+TGG + chr8_1:60565933-60565952 Msa1204760:intron 45.0%
!! ACAGAGGCATTCGATTAGGT+TGG + chr8_1:60565979-60565998 Msa1204760:intron 45.0%
GGATAGACACTGCTCAACAT+AGG - chr8_1:60566097-60566116 None:intergenic 45.0%
AGCAAGTGAACATGCTACTG+GGG - chr8_1:60566408-60566427 None:intergenic 45.0%
!! ATGTAATAATAAAAATAATA+TGG + chr8_1:60558886-60558905 Msa1204760:intron 5.0%
!! ATATATATATATATATATAG+GGG + chr8_1:60559503-60559522 Msa1204760:intron 5.0%
!! TATATATATATATATATATG+GGG - chr8_1:60560526-60560545 None:intergenic 5.0%
!! TATATATATATATTACAAAA+TGG + chr8_1:60560536-60560555 Msa1204760:intron 5.0%
!! ATATATATATATTACAAAAT+GGG + chr8_1:60560537-60560556 Msa1204760:intron 5.0%
!!! AAAATAAAAAAATTATGTTT+TGG + chr8_1:60564478-60564497 Msa1204760:intron 5.0%
GAAGAATCATAGCGTGGTGG+CGG - chr8_1:60558026-60558045 None:intergenic 50.0%
GAGGAAGAATCATAGCGTGG+TGG - chr8_1:60558029-60558048 None:intergenic 50.0%
GTTAGGGTGACGCTTCGATT+CGG - chr8_1:60558115-60558134 None:intergenic 50.0%
GGAGTCTCATACGAGCGTTA+GGG - chr8_1:60558131-60558150 None:intergenic 50.0%
TGGAGTCTCATACGAGCGTT+AGG - chr8_1:60558132-60558151 None:intergenic 50.0%
TGAACAGTGTGGTAGGCATC+AGG + chr8_1:60558364-60558383 Msa1204760:CDS 50.0%
CTGTGCTATCAGAGTGTGCT+TGG + chr8_1:60558788-60558807 Msa1204760:intron 50.0%
GCTATCAGAGTGTGCTTGGT+AGG + chr8_1:60558792-60558811 Msa1204760:intron 50.0%
! AGGGCAGGAAGGAAGTATGT+CGG + chr8_1:60559417-60559436 Msa1204760:intron 50.0%
! GAAGAGGTATAACGACGGGA+AGG - chr8_1:60559724-60559743 None:intergenic 50.0%
GGCGACCCATGAAGAATTGA+AGG - chr8_1:60559832-60559851 None:intergenic 50.0%
! TTTTGGCCTGTTAGAGGTGG+TGG - chr8_1:60560190-60560209 None:intergenic 50.0%
GTCATGTGTTGCAGAGAGCA+TGG + chr8_1:60560271-60560290 Msa1204760:intron 50.0%
! TGTGTTGCAGAGAGCATGGA+AGG + chr8_1:60560275-60560294 Msa1204760:intron 50.0%
CACTTGGACACAAAGACCCT+TGG - chr8_1:60560444-60560463 None:intergenic 50.0%
GGAAATCACACCTTGAGGTG+TGG - chr8_1:60560602-60560621 None:intergenic 50.0%
AGAGAGAGAGAGAGACAGAC+AGG + chr8_1:60560723-60560742 Msa1204760:intron 50.0%
GAGAGAGAGAGAGACAGACA+GGG + chr8_1:60560724-60560743 Msa1204760:intron 50.0%
AGTACTAGCAGTGGTGTCCT+TGG + chr8_1:60561538-60561557 Msa1204760:CDS 50.0%
CAACCAAAAACAGCACGCTG+TGG - chr8_1:60561604-60561623 None:intergenic 50.0%
TGGTGGAATGGATGTTGGTG+GGG + chr8_1:60561756-60561775 Msa1204760:CDS 50.0%
TGCAAAGACCATGTCTGACG+GGG - chr8_1:60561809-60561828 None:intergenic 50.0%
GTGCAAAGACCATGTCTGAC+GGG - chr8_1:60561810-60561829 None:intergenic 50.0%
TGAAATACACACCTGCGCAC+AGG - chr8_1:60561841-60561860 None:intergenic 50.0%
AGATACATGTTGCGGGGAAG+CGG + chr8_1:60561983-60562002 Msa1204760:CDS 50.0%
CATGGAACGGTCTTGGATAG+TGG + chr8_1:60562039-60562058 Msa1204760:CDS 50.0%
!! GAAGGTGCCAACAAAATGGC+AGG - chr8_1:60562175-60562194 None:intergenic 50.0%
TGTTTCGGACGACGATACCT+GGG - chr8_1:60563308-60563327 None:intergenic 50.0%
CTCCCATAACTCAGCACAGT+TGG - chr8_1:60563379-60563398 None:intergenic 50.0%
!! ATTTGGAGGCATTGGTGGTG+GGG - chr8_1:60563421-60563440 None:intergenic 50.0%
!! GTATTTGGAGGCATTGGTGG+TGG - chr8_1:60563423-60563442 None:intergenic 50.0%
GACACAGATGGAGCAACTGA+AGG - chr8_1:60563477-60563496 None:intergenic 50.0%
CATCATCTCGTAACGTGGCT+CGG + chr8_1:60563560-60563579 Msa1204760:intron 50.0%
ATCATCTCGTAACGTGGCTC+GGG + chr8_1:60563561-60563580 Msa1204760:intron 50.0%
!! CCAGCCAATTCTTTAAGGCG+AGG - chr8_1:60563766-60563785 None:intergenic 50.0%
CCTCGCCTTAAAGAATTGGC+TGG + chr8_1:60563763-60563782 Msa1204760:CDS 50.0%
CGTGTATTTAGGCAGCTGGA+CGG + chr8_1:60563896-60563915 Msa1204760:intron 50.0%
GTGTATTTAGGCAGCTGGAC+GGG + chr8_1:60563897-60563916 Msa1204760:intron 50.0%
GTAATCAGCATATGGCCTCG+GGG - chr8_1:60564152-60564171 None:intergenic 50.0%
AGGCATCAGGAAGTTGCATG+CGG - chr8_1:60564290-60564309 None:intergenic 50.0%
!! CAACTCAGTTGGTAGCTGCT+AGG + chr8_1:60565390-60565409 Msa1204760:intron 50.0%
TCAGGAACAGCCACATCAAC+AGG - chr8_1:60566320-60566339 None:intergenic 50.0%
AATGGCTGGAGTTCTTGCTC+AGG - chr8_1:60566338-60566357 None:intergenic 50.0%
CATGCTACTGGGGACTAATG+AGG - chr8_1:60566398-60566417 None:intergenic 50.0%
CGAGTCAGCGTCTTCCTCAA+GGG - chr8_1:60557794-60557813 None:intergenic 55.0%
TCGAGTCAGCGTCTTCCTCA+AGG - chr8_1:60557795-60557814 None:intergenic 55.0%
!!! TCGGGCTGGTGGAACGATTT+TGG - chr8_1:60557906-60557925 None:intergenic 55.0%
CGATGGTGTGGGTAATGTGG+AGG - chr8_1:60557978-60557997 None:intergenic 55.0%
CACATTACCCACACCATCGC+CGG + chr8_1:60557979-60557998 Msa1204760:CDS 55.0%
!! TCATAGCGTGGTGGCGGTTA+CGG - chr8_1:60558020-60558039 None:intergenic 55.0%
!! TCGATTCGGATCCGTGAAGC+TGG - chr8_1:60558101-60558120 None:intergenic 55.0%
AAAACATTTCACGGCGGCGC+CGG - chr8_1:60559780-60559799 None:intergenic 55.0%
!!! GGTGGTGGAGGAGCAAGTTT+TGG - chr8_1:60560175-60560194 None:intergenic 55.0%
! GTTGCAGAGAGCATGGAAGG+TGG + chr8_1:60560278-60560297 Msa1204760:intron 55.0%
! CAGAGAGCATGGAAGGTGGT+GGG + chr8_1:60560282-60560301 Msa1204760:intron 55.0%
GTGTCCAAGTGACAAGGTGC+AGG + chr8_1:60560453-60560472 Msa1204760:intron 55.0%
GCAACCTGCACCTTGTCACT+TGG - chr8_1:60560460-60560479 None:intergenic 55.0%
TAGCAGTGGTGTCCTTGGAG+AGG + chr8_1:60561543-60561562 Msa1204760:CDS 55.0%
!!! GCTCCACAGCGTGCTGTTTT+TGG + chr8_1:60561598-60561617 Msa1204760:CDS 55.0%
! GGTGGAATGGATGTTGGTGG+GGG + chr8_1:60561757-60561776 Msa1204760:CDS 55.0%
CATATCTCCCCCGTCAGACA+TGG + chr8_1:60561798-60561817 Msa1204760:CDS 55.0%
GCAAAGACCATGTCTGACGG+GGG - chr8_1:60561808-60561827 None:intergenic 55.0%
AACACATTGCGGCCTTGCCA+AGG + chr8_1:60562368-60562387 Msa1204760:intron 55.0%
GTGTTTCGGACGACGATACC+TGG - chr8_1:60563309-60563328 None:intergenic 55.0%
TCATCTCGTAACGTGGCTCG+GGG + chr8_1:60563562-60563581 Msa1204760:intron 55.0%
AGCATATGGCCTCGGGGTTA+TGG - chr8_1:60564146-60564165 None:intergenic 55.0%
GATGGCATAACGGCCTATGG+TGG + chr8_1:60565169-60565188 Msa1204760:intron 55.0%
TTATGTTGGGGCTGCGGAAG+AGG - chr8_1:60565599-60565618 None:intergenic 55.0%
GCAAACCATGGTCACTGAGC+TGG + chr8_1:60566444-60566463 Msa1204760:three_prime_UTR 55.0%
CTTGACCAGCTCAGTGACCA+TGG - chr8_1:60566452-60566471 None:intergenic 55.0%
CATGGTCACTGAGCTGGTCA+AGG + chr8_1:60566450-60566469 Msa1204760:three_prime_UTR 55.0%
GTGCCATGAGGTGGTGACTC+GGG - chr8_1:60557924-60557943 None:intergenic 60.0%
CGTGCCATGAGGTGGTGACT+CGG - chr8_1:60557925-60557944 None:intergenic 60.0%
CGAGTCACCACCTCATGGCA+CGG + chr8_1:60557923-60557942 Msa1204760:exon 60.0%
TTAGTGGCCGTGCCATGAGG+TGG - chr8_1:60557933-60557952 None:intergenic 60.0%
GAGTTAGTGGCCGTGCCATG+AGG - chr8_1:60557936-60557955 None:intergenic 60.0%
CGGCGATGGTGTGGGTAATG+TGG - chr8_1:60557981-60558000 None:intergenic 60.0%
GTGGCGGTTACGGAGGAATG+CGG - chr8_1:60558010-60558029 None:intergenic 60.0%
!! ACGAGGATCGAGTGCTGACG+TGG - chr8_1:60558076-60558095 None:intergenic 60.0%
GATCCTCGTCGCCAGCTTCA+CGG + chr8_1:60558087-60558106 Msa1204760:CDS 60.0%
GCTCCTCCACCACCTCTAAC+AGG + chr8_1:60560181-60560200 Msa1204760:intron 60.0%
! TGGCCTGTTAGAGGTGGTGG+AGG - chr8_1:60560187-60560206 None:intergenic 60.0%
! GCAGAGAGCATGGAAGGTGG+TGG + chr8_1:60560281-60560300 Msa1204760:intron 60.0%
GGCATTATGGGTTTGGGCCG+AGG + chr8_1:60561667-60561686 Msa1204760:CDS 60.0%
! GGATGTTGGTGGGGGTGCAA+TGG + chr8_1:60561765-60561784 Msa1204760:CDS 60.0%
! GGTGGGGGTGCAATGGTTCT+TGG + chr8_1:60561772-60561791 Msa1204760:CDS 60.0%
! GGGGGTGCAATGGTTCTTGG+TGG + chr8_1:60561775-60561794 Msa1204760:CDS 60.0%
CACAATCGGATCCTGTGCGC+AGG + chr8_1:60561827-60561846 Msa1204760:CDS 60.0%
! CATCTCGTAACGTGGCTCGG+GGG + chr8_1:60563563-60563582 Msa1204760:intron 60.0%
!! AGGCAGCTGGACGGGTTGTT+AGG + chr8_1:60563905-60563924 Msa1204760:intron 60.0%
!! GGCAGCTGGACGGGTTGTTA+GGG + chr8_1:60563906-60563925 Msa1204760:intron 60.0%
!! AGCTGGACGGGTTGTTAGGG+TGG + chr8_1:60563909-60563928 Msa1204760:intron 60.0%
!! GCTGGACGGGTTGTTAGGGT+GGG + chr8_1:60563910-60563929 Msa1204760:intron 60.0%
CTAGATGGGCCATAACCCCG+AGG + chr8_1:60564134-60564153 Msa1204760:CDS 60.0%
GCATGCGGTGTTCAGCAAGC+CGG - chr8_1:60564275-60564294 None:intergenic 60.0%
GCGGATGGCATAACGGCCTA+TGG + chr8_1:60565166-60565185 Msa1204760:intron 60.0%
GGAATCCGGGGATTGAACCC+CGG - chr8_1:60565433-60565452 None:intergenic 60.0%
GTGGAGAAGTGGGGAATCCG+GGG - chr8_1:60565445-60565464 None:intergenic 60.0%
CGTGGAGAAGTGGGGAATCC+GGG - chr8_1:60565446-60565465 None:intergenic 60.0%
GCGTGGAGAAGTGGGGAATC+CGG - chr8_1:60565447-60565466 None:intergenic 60.0%
! CATGAGGTGGTGACTCGGGC+TGG - chr8_1:60557920-60557939 None:intergenic 65.0%
CAGCCCGAGTCACCACCTCA+TGG + chr8_1:60557918-60557937 Msa1204760:exon 65.0%
!! ACGGAGGAATGCGGTGTCGC+CGG - chr8_1:60558001-60558020 None:intergenic 65.0%
!! TAGCGTGGTGGCGGTTACGG+AGG - chr8_1:60558017-60558036 None:intergenic 65.0%
GATCCGTGAAGCTGGCGACG+AGG - chr8_1:60558093-60558112 None:intergenic 65.0%
!! AGGCATTGGTGGTGGGGCAC+TGG - chr8_1:60563415-60563434 None:intergenic 65.0%
ATGCGCCGGGGTTCAATCCC+CGG + chr8_1:60565425-60565444 Msa1204760:intron 65.0%
! GAGGTGGTGACTCGGGCTGG+TGG - chr8_1:60557917-60557936 None:intergenic 70.0%
! GGTGTCGCCGGCGATGGTGT+GGG - chr8_1:60557989-60558008 None:intergenic 70.0%
!! GAATGCGGTGTCGCCGGCGA+TGG - chr8_1:60557995-60558014 None:intergenic 70.0%
!! CGGTGTCGCCGGCGATGGTG+TGG - chr8_1:60557990-60558009 None:intergenic 75.0%
!! TTTCACGGCGGCGCCGGCTC+TGG - chr8_1:60559774-60559793 None:intergenic 75.0%
Chromosome Type Strat End Strand Name
chr8_1 gene 60557747 60566715 60557747 ID=Msa1204760;Name=Msa1204760
chr8_1 mRNA 60557747 60566715 60557747 ID=Msa1204760-mRNA-1;Parent=Msa1204760;Name=Msa1204760-mRNA-1;_AED=0.06;_eAED=0.06;_QI=190|1|1|1|1|1|12|354|631
chr8_1 exon 60557747 60558172 60557747 ID=Msa1204760-mRNA-1:exon:19644;Parent=Msa1204760-mRNA-1
chr8_1 exon 60558265 60558385 60558265 ID=Msa1204760-mRNA-1:exon:19645;Parent=Msa1204760-mRNA-1
chr8_1 exon 60561421 60561848 60561421 ID=Msa1204760-mRNA-1:exon:19646;Parent=Msa1204760-mRNA-1
chr8_1 exon 60561957 60562113 60561957 ID=Msa1204760-mRNA-1:exon:19647;Parent=Msa1204760-mRNA-1
chr8_1 exon 60562716 60562798 60562716 ID=Msa1204760-mRNA-1:exon:19648;Parent=Msa1204760-mRNA-1
chr8_1 exon 60562881 60562977 60562881 ID=Msa1204760-mRNA-1:exon:19649;Parent=Msa1204760-mRNA-1
chr8_1 exon 60563091 60563163 60563091 ID=Msa1204760-mRNA-1:exon:19650;Parent=Msa1204760-mRNA-1
chr8_1 exon 60563310 60563516 60563310 ID=Msa1204760-mRNA-1:exon:19651;Parent=Msa1204760-mRNA-1
chr8_1 exon 60563698 60563822 60563698 ID=Msa1204760-mRNA-1:exon:19652;Parent=Msa1204760-mRNA-1
chr8_1 exon 60564091 60564192 60564091 ID=Msa1204760-mRNA-1:exon:19653;Parent=Msa1204760-mRNA-1
chr8_1 exon 60564261 60564358 60564261 ID=Msa1204760-mRNA-1:exon:19654;Parent=Msa1204760-mRNA-1
chr8_1 exon 60566193 60566715 60566193 ID=Msa1204760-mRNA-1:exon:19655;Parent=Msa1204760-mRNA-1
chr8_1 five_prime_UTR 60557747 60557936 60557747 ID=Msa1204760-mRNA-1:five_prime_utr;Parent=Msa1204760-mRNA-1
chr8_1 CDS 60557937 60558172 60557937 ID=Msa1204760-mRNA-1:cds;Parent=Msa1204760-mRNA-1
chr8_1 CDS 60558265 60558385 60558265 ID=Msa1204760-mRNA-1:cds;Parent=Msa1204760-mRNA-1
chr8_1 CDS 60561421 60561848 60561421 ID=Msa1204760-mRNA-1:cds;Parent=Msa1204760-mRNA-1
chr8_1 CDS 60561957 60562113 60561957 ID=Msa1204760-mRNA-1:cds;Parent=Msa1204760-mRNA-1
chr8_1 CDS 60562716 60562798 60562716 ID=Msa1204760-mRNA-1:cds;Parent=Msa1204760-mRNA-1
chr8_1 CDS 60562881 60562977 60562881 ID=Msa1204760-mRNA-1:cds;Parent=Msa1204760-mRNA-1
chr8_1 CDS 60563091 60563163 60563091 ID=Msa1204760-mRNA-1:cds;Parent=Msa1204760-mRNA-1
chr8_1 CDS 60563310 60563516 60563310 ID=Msa1204760-mRNA-1:cds;Parent=Msa1204760-mRNA-1
chr8_1 CDS 60563698 60563822 60563698 ID=Msa1204760-mRNA-1:cds;Parent=Msa1204760-mRNA-1
chr8_1 CDS 60564091 60564192 60564091 ID=Msa1204760-mRNA-1:cds;Parent=Msa1204760-mRNA-1
chr8_1 CDS 60564261 60564358 60564261 ID=Msa1204760-mRNA-1:cds;Parent=Msa1204760-mRNA-1
chr8_1 CDS 60566193 60566361 60566193 ID=Msa1204760-mRNA-1:cds;Parent=Msa1204760-mRNA-1
chr8_1 three_prime_UTR 60566362 60566715 60566362 ID=Msa1204760-mRNA-1:three_prime_utr;Parent=Msa1204760-mRNA-1
Gene Sequence

>Msa1204760

ATGGCACGGCCACTAACTCACCTCATCCTAATCTTAATCCTCCACATTACCCACACCATCGCCGGCGACACCGCATTCCTCCGTAACCGCCACCACGCTATGATTCTTCCTCTATACCTAACCACTCCTAATTCATCCACGTCAGCACTCGATCCTCGTCGCCAGCTTCACGGATCCGAATCGAAGCGTCACCCTAACGCTCGTATGAGACTCCACGATGATCTTCTTCTTAACGGATATTATACAACAAGGCTTTGGATCGGTACTCCTCCGCAAATGTTTGCTCTTATTGTTGATACGGGGAGTACTGTTACGTATGTTCCTTGCTCTACTTGTGAACAGTGTGGTAGGCATCAGGATCCGAAGTTTCAGCCAGACTTGTCAAGCACCTATCAACCTGTCAAATGCACATTGGATTGCAACTGTGACAATGACAGGATGCAATGTGTGTATGAGAGACAGTATGCTGAAATGAGTACTAGCAGTGGTGTCCTTGGAGAGGATGTCATATCCTTTGGAAATCAGAGCGAGCTTGCTCCACAGCGTGCTGTTTTTGGTTGTGAAAATGTTGAGACTGGTGATCTTTACAGTCAGCATGCTGATGGCATTATGGGTTTGGGCCGAGGAGATCTTAGTATCATGGATCAGCTGGTTGACAAAAATGTAGTTAGTGATTCATTCTCACTATGCTATGGTGGAATGGATGTTGGTGGGGGTGCAATGGTTCTTGGTGGCATATCTCCCCCGTCAGACATGGTCTTTGCACAATCGGATCCTGTGCGCAGTCCCTATTACAATATTGATTTGAAGGAGATACATGTTGCGGGGAAGCGGCTGCCTCTAAACCCGAGTGTTTTTGATGGAAAACATGGAACGGTCTTGGATAGTGGTACAACTTATGCATACCTACCGGAAGAAGCATTTCTTGCATTTAAAGAAGCTATTGTGAAGGAACTTCAATCTTTCAATCAAATCAGCGGTCCAGATCCAAATTATAATGATTTATGTTTTTCTGGTGCTGGAATTGATGTGTCACAACTCTCTAAAACCTTTCCGGTAGTTGACATGGTATTTGGAAATGGTCACAAGTACTCACTGTCACCTGAAAATTACATGTTCCGGCATTCAAAAGTAAGAGGTGCATATTGTCTGGGAATTTTTCAAAATGGAAAGGATCCAACTACTCTTTTAGGAGGTATCGTCGTCCGAAACACTCTTGTTTTGTATGATCGCGAGCAAACAAAAATTGGTTTTTGGAAAACCAACTGTGCTGAGTTATGGGAGAGACTGCAGATATCCAGTGCCCCACCACCAATGCCTCCAAATACAGAAGCAACAAATTCAACCAAATCAGTGGATCCTTCAGTTGCTCCATCTGTGTCACAACATAATGTACCTCCAGGTGAATTCCAAATCGCAGAAATAACAATAGCAGTTTCATTTAATATCAGCTACGATGATATGAAGCCTCGCCTTAAAGAATTGGCTGGACTCATAGCTCACGAGTTAAATGTTAATACTTCCCAGATCCACTTACTGAATTTTACAGCTTCTGGAAATGATTCTCTCTCTAGATGGGCCATAACCCCGAGGCCATATGCTGATTACTTTTCTAAGTCAACTGCAATGAATATAATTGGCCGGCTTGCTGAACACCGCATGCAACTTCCTGATGCCTTCGGAAGTTATAAGTTGATTGATTGGAATGTTATGCCTCCATCAAAAAGGAATTGGTGGCAGCGATATTACATGATTGTGGGCCTAGCTGTTCTTCTTACATTGCTTCTAGGATTATCAATATTTGGATTCTTTATTTGGAAAAAAAGACGGCAAAGCGCACATTCATATAAACCTGTTGATGTGGCTGTTCCTGAGCAAGAACTCCAGCCATTATGA
Protein sequence

>Msa1204760

MARPLTHLILILILHITHTIAGDTAFLRNRHHAMILPLYLTTPNSSTSALDPRRQLHGSESKRHPNARMRLHDDLLLNGYYTTRLWIGTPPQMFALIVDTGSTVTYVPCSTCEQCGRHQDPKFQPDLSSTYQPVKCTLDCNCDNDRMQCVYERQYAEMSTSSGVLGEDVISFGNQSELAPQRAVFGCENVETGDLYSQHADGIMGLGRGDLSIMDQLVDKNVVSDSFSLCYGGMDVGGGAMVLGGISPPSDMVFAQSDPVRSPYYNIDLKEIHVAGKRLPLNPSVFDGKHGTVLDSGTTYAYLPEEAFLAFKEAIVKELQSFNQISGPDPNYNDLCFSGAGIDVSQLSKTFPVVDMVFGNGHKYSLSPENYMFRHSKVRGAYCLGIFQNGKDPTTLLGGIVVRNTLVLYDREQTKIGFWKTNCAELWERLQISSAPPPMPPNTEATNSTKSVDPSVAPSVSQHNVPPGEFQIAEITIAVSFNISYDDMKPRLKELAGLIAHELNVNTSQIHLLNFTASGNDSLSRWAITPRPYADYFSKSTAMNIIGRLAEHRMQLPDAFGSYKLIDWNVMPPSKRNWWQRYYMIVGLAVLLTLLLGLSIFGFFIWKKRRQSAHSYKPVDVAVPEQELQPL*