AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar zhongmu-4 / Msa0046700


Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0046700 MtrunA17_Chr3g0121031 97.706 654 13 1 1 654 1 652 0.0 1332
Msa0046700 MtrunA17_Chr5g0413861 40.248 564 323 11 88 645 149 704 2.74e-137 418
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0046700 AT2G04842.1 81.290 620 112 2 39 654 31 650 0.0 1082
Msa0046700 AT2G04842.2 81.290 620 112 2 39 654 31 650 0.0 1082
Msa0046700 AT5G26830.1 39.716 564 326 10 88 645 147 702 2.80e-139 424
Msa0046700 AT1G17960.2 43.253 289 158 3 367 650 96 383 1.50e-73 242
Msa0046700 AT1G17960.1 36.154 390 211 7 266 650 100 456 2.60e-72 241
Msa0046700 AT1G18130.1 35.099 151 92 4 502 650 17 163 2.27e-18 83.2

Find 182 sgRNAs with CRISPR-Local

Find 394 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
GATATTTACGGTACCATAAA+AGG 0.123288 1_1:+79020556 None:intergenic
GAATTGTCCTTATCATATTT+TGG 0.167424 1_1:-79022840 Msa0046700:CDS
CTGAATACTTCTATTAAAAT+TGG 0.183629 1_1:-79020515 Msa0046700:three_prime_UTR
TTGACAATAAGCCACATTTA+TGG 0.188468 1_1:-79020593 Msa0046700:three_prime_UTR
ACCATACAAGATGGAGATTT+TGG 0.189747 1_1:-79024515 Msa0046700:CDS
CCCATCACAATTTATTATAT+TGG 0.226248 1_1:-79024475 Msa0046700:intron
ATCGGGCCTTGGATAGAAAA+TGG 0.232158 1_1:-79024800 Msa0046700:CDS
GAAGAAACATTATCGCAATT+TGG 0.236532 1_1:-79022300 Msa0046700:CDS
ATCTATCTTTGGCCCATAAA+AGG 0.242304 1_1:+79022134 None:intergenic
GGATCCTTGGAAAGATTCTT+TGG 0.273179 1_1:-79021317 Msa0046700:CDS
CTGTCGGAGAAGATGATATA+TGG 0.278013 1_1:-79022233 Msa0046700:CDS
CCAATGCTGCAAAGGATATA+TGG 0.287726 1_1:-79023386 Msa0046700:CDS
TCCTTGAAGGCGGGGAGTGG+TGG 0.306185 1_1:-79023514 Msa0046700:intron
AAAGATGCTTTGGATGATAA+AGG 0.308143 1_1:-79022189 Msa0046700:CDS
AGTCTATTGCTGGTGCTTAC+TGG 0.312521 1_1:-79023427 Msa0046700:CDS
CCTGTTAGGGTAGCAGAATT+AGG 0.317000 1_1:-79022782 Msa0046700:CDS
CCTAATTCTGCTACCCTAAC+AGG 0.323506 1_1:+79022782 None:intergenic
CTCAGCTTTAAAAGATGCTT+TGG 0.325155 1_1:-79022199 Msa0046700:CDS
TTGGAAGATCAGTGGTCATT+TGG 0.329279 1_1:-79022930 Msa0046700:CDS
ATTAAAATTGGATTGAAAGT+TGG 0.331427 1_1:-79020503 Msa0046700:three_prime_UTR
TCAATCTTGACATCTATCTT+TGG 0.338502 1_1:+79022123 None:intergenic
ATCGGAGACCGCGGCGGGTT+GGG 0.342148 1_1:+79026039 None:intergenic
AAGCTAAACGTCGGGATCAT+AGG 0.344843 1_1:-79023310 Msa0046700:CDS
TCTGCATTTCTTATGAGCTT+TGG 0.360438 1_1:+79021042 None:intergenic
AGGATCCAAGCACTGCTCTA+TGG 0.361693 1_1:+79021333 None:intergenic
ATCTTGTTCACACGTGAGTT+TGG 0.362092 1_1:-79020847 Msa0046700:three_prime_UTR
GGTAAAATTCGAGCTTGTAT+TGG 0.363721 1_1:+79021248 None:intergenic
GAACGATAAAATGATATTTA+CGG 0.370970 1_1:+79020544 None:intergenic
GTGTTGGACGATTCATTAGT+AGG 0.373868 1_1:+79025989 None:intergenic
AGAGATGAGGGTGGTGGACT+TGG 0.374389 1_1:-79026276 Msa0046700:five_prime_UTR
CCATATATCCTTTGCAGCAT+TGG 0.378495 1_1:+79023386 None:intergenic
AAAACAGAAAATTCCATTGA+TGG 0.380582 1_1:-79021019 Msa0046700:CDS
TAGAGCAGTGCTTGGATCCT+TGG 0.381818 1_1:-79021330 Msa0046700:CDS
ACTGCTCTATGGATCATTAT+AGG 0.385013 1_1:+79021344 None:intergenic
ACCAGATTAAAGATGAGATC+AGG 0.388099 1_1:-79022341 Msa0046700:CDS
TCCAAAATCTCCATCTTGTA+TGG 0.388459 1_1:+79024514 None:intergenic
TGAAGCTCATAGAAGAATAT+TGG 0.390948 1_1:-79024548 Msa0046700:CDS
GTCTCACGATAGCACCCTTT+GGG 0.401539 1_1:+79023038 None:intergenic
CCCTGATCTCATCTTTAATC+TGG 0.414515 1_1:+79022340 None:intergenic
ATGCAGGAGGATGCTGGTGG+GGG 0.414770 1_1:-79023076 Msa0046700:intron
GTTACCTGGGCATCAGTAAC+AGG 0.414807 1_1:+79021227 None:intergenic
GTTGAACTTGAGTCTATTGC+TGG 0.414953 1_1:-79023437 Msa0046700:CDS
AAACAGTTACCGTTAGATCT+AGG 0.416384 1_1:-79020966 Msa0046700:CDS
TGTATTGGAGAAAGCCATAA+TGG 0.417915 1_1:+79021263 None:intergenic
TGTCTCACGATAGCACCCTT+TGG 0.422035 1_1:+79023037 None:intergenic
TCTAGGTTTGGTGGGGAGCT+TGG 0.423667 1_1:-79020949 Msa0046700:CDS
ATGTGGCAAAAGCTGATCTT+TGG 0.426316 1_1:-79022949 Msa0046700:CDS
TTGTATACCAAAATATGATA+AGG 0.433599 1_1:+79022833 None:intergenic
CCTTGAAGGCGGGGAGTGGT+GGG 0.437435 1_1:-79023513 Msa0046700:intron
GGACCTCATGTTGAATCTAC+TGG 0.441354 1_1:-79023479 Msa0046700:CDS
GAGAAGAATGCAAGTGCAAA+AGG 0.441878 1_1:-79020825 Msa0046700:three_prime_UTR
CAAAAGTCACAATCGGGCCT+TGG 0.442699 1_1:-79024811 Msa0046700:CDS
AGATGAGATCAGGGGTGTCC+TGG 0.443090 1_1:-79022331 Msa0046700:CDS
GAGACCGCGGCGGGTTGGGA+AGG 0.445245 1_1:+79026043 None:intergenic
CCGTTAGATCTAGGTTTGGT+GGG 0.445581 1_1:-79020957 Msa0046700:CDS
AAATTGCGATAATGTTTCTT+CGG 0.448655 1_1:+79022302 None:intergenic
CATTAGTAGGGAGAACAATT+CGG 0.454383 1_1:+79026002 None:intergenic
TCGGTCTTGGCGGTCGGAAT+CGG 0.457890 1_1:+79026021 None:intergenic
TAGGGAGAACAATTCGGTCT+TGG 0.461422 1_1:+79026008 None:intergenic
TGAAACCTCTAACGCGGAAA+AGG 0.462420 1_1:+79022720 None:intergenic
TTGGGAAGGGCTCGTGGCGA+CGG 0.463681 1_1:+79026057 None:intergenic
GTCAAGATTGAGGATGCTCT+TGG 0.464197 1_1:-79022111 Msa0046700:CDS
ACCAATATAATAAATTGTGA+TGG 0.469585 1_1:+79024474 None:intergenic
TTGAAACTTCTTCTCTTACA+AGG 0.474232 1_1:+79024575 None:intergenic
AGACCGCGGCGGGTTGGGAA+GGG 0.475405 1_1:+79026044 None:intergenic
TCGGGCCTTGGATAGAAAAT+GGG 0.479957 1_1:-79024799 Msa0046700:CDS
GGCGAGAGTGGAGAATTTCC+TGG 0.479957 1_1:+79026078 None:intergenic
CCTCAAGCAAAAGTCACAAT+CGG 0.480420 1_1:-79024818 Msa0046700:CDS
TCGGAATCGGAGACCGCGGC+GGG 0.480962 1_1:+79026034 None:intergenic
ATATGATAAGGACAATTCAT+TGG 0.481092 1_1:+79022845 None:intergenic
ATTCCATTGATGGCTGTTGT+AGG 0.483364 1_1:-79021009 Msa0046700:CDS
AAGTTAAGGAATTGCCTGTA+TGG 0.483636 1_1:+79022068 None:intergenic
AATTGGATTGAAAGTTGGAT+AGG 0.488030 1_1:-79020498 Msa0046700:three_prime_UTR
ATGTTTCTTCGGTAAGATCC+AGG 0.488202 1_1:+79022313 None:intergenic
AATCGGAGACCGCGGCGGGT+TGG 0.491466 1_1:+79026038 None:intergenic
TCAAGATTGAGGATGCTCTT+GGG 0.492384 1_1:-79022110 Msa0046700:CDS
GTTTATAGATATGAACTGTC+TGG 0.493569 1_1:-79022755 Msa0046700:CDS
GAAAAGAGTAGAAGCCATCT+TGG 0.494131 1_1:+79026216 None:intergenic
GGAGAATTTCCTGGTGAAGA+AGG 0.498283 1_1:+79026087 None:intergenic
TTCAAATCTTTATCTGTCAA+AGG 0.499220 1_1:+79024752 None:intergenic
CTGCTGCCTGTGAGTTCAGA+TGG 0.500082 1_1:-79020722 Msa0046700:three_prime_UTR
GTTACCGTTAGATCTAGGTT+TGG 0.501718 1_1:-79020961 Msa0046700:CDS
TATGCAGGAGGATGCTGGTG+GGG 0.502690 1_1:-79023077 Msa0046700:intron
CTATGTTCTCGTGGTGGCGA+TGG 0.506495 1_1:-79020745 Msa0046700:three_prime_UTR
AACAATTCGGTCTTGGCGGT+CGG 0.508431 1_1:+79026015 None:intergenic
ATGGAGTTTAAGGAAATGAA+TGG 0.509268 1_1:+79026162 None:intergenic
TGAAACTTCTTCTCTTACAA+GGG 0.509459 1_1:+79024576 None:intergenic
GGACCTATCAAATTGATGAC+GGG 0.511120 1_1:-79022164 Msa0046700:CDS
TGTCGGAGAAGATGATATAT+GGG 0.511505 1_1:-79022232 Msa0046700:CDS
CAAAGAAGAAGCTAAACGTC+GGG 0.511632 1_1:-79023318 Msa0046700:CDS
AAATTTATGCAGGAGGATGC+TGG 0.512173 1_1:-79023082 Msa0046700:intron
GTGGCAGTGTTCAACCATAC+AGG 0.514253 1_1:-79022082 Msa0046700:intron
CAACTCCATCCTTCTTCACC+AGG 0.515417 1_1:-79026096 Msa0046700:CDS
ATATTTACGGTACCATAAAA+GGG 0.516179 1_1:+79020557 None:intergenic
GGAGAACAATTCGGTCTTGG+CGG 0.516702 1_1:+79026011 None:intergenic
ACAAATCAAGATCTTGTCCT+AGG 0.517714 1_1:+79023285 None:intergenic
AAAGGAAGCGTCATTCCTAT+CGG 0.520757 1_1:-79022811 Msa0046700:CDS
TTTACCTGTTACTGATGCCC+AGG 0.525812 1_1:-79021231 Msa0046700:intron
AATGTGTATCATAGTGATGT+TGG 0.526267 1_1:+79020874 None:intergenic
TGGTCATTTGGACTTCTACA+AGG 0.528039 1_1:-79022918 Msa0046700:CDS
TTCTCTACACTCGTCCAAGA+TGG 0.529930 1_1:-79026230 Msa0046700:exon
CCAATATAATAAATTGTGAT+GGG 0.530976 1_1:+79024475 None:intergenic
CTCAAGCAAAAGTCACAATC+GGG 0.531108 1_1:-79024817 Msa0046700:CDS
CGTTAGATCTAGGTTTGGTG+GGG 0.533169 1_1:-79020956 Msa0046700:CDS
GGCGGGTTGGGAAGGGCTCG+TGG 0.534175 1_1:+79026051 None:intergenic
ATGTGTATCATAGTGATGTT+GGG 0.539155 1_1:+79020875 None:intergenic
GCACCTACAACAGCCATCAA+TGG 0.541514 1_1:+79021006 None:intergenic
GCTCGTGGCGACGGCGAGAG+TGG 0.544897 1_1:+79026066 None:intergenic
AAGGAAGCGTCATTCCTATC+GGG 0.545437 1_1:-79022810 Msa0046700:CDS
AAAGATAGATGTCAAGATTG+AGG 0.545643 1_1:-79022121 Msa0046700:CDS
AGGATGCTCTTGGGAGAAAG+TGG 0.546331 1_1:-79022101 Msa0046700:CDS
AAAAGAAACCAATGCTGCAA+AGG 0.547530 1_1:-79023394 Msa0046700:CDS
ATGCTTTGGATGATAAAGGC+TGG 0.549323 1_1:-79022185 Msa0046700:CDS
ACCGTTAGATCTAGGTTTGG+TGG 0.549435 1_1:-79020958 Msa0046700:CDS
AATAAAATCATCAATTGTCA+TGG 0.549490 1_1:+79020924 None:intergenic
TGTTGGACGATTCATTAGTA+GGG 0.549494 1_1:+79025990 None:intergenic
GAAGAGAATCAAGAAAGAGA+TGG 0.552555 1_1:-79024732 Msa0046700:intron
GAGTGGTGGGACCTATGTGC+TGG 0.554699 1_1:-79023500 Msa0046700:CDS
ATGATCCATAGAGCAGTGCT+TGG 0.558727 1_1:-79021338 Msa0046700:CDS
TGTTCATCGAAGAACAAAGC+AGG 0.560147 1_1:-79020695 Msa0046700:three_prime_UTR
AATTTCCTGGTGAAGAAGGA+TGG 0.560669 1_1:+79026091 None:intergenic
GGAGAACGAAGAGAACGAAA+AGG 0.567347 1_1:+79026118 None:intergenic
TTGGACGAGTGTAGAGAAGA+AGG 0.568023 1_1:+79026235 None:intergenic
GTTGCAGTGTGCGCATGTGA+TGG 0.569803 1_1:-79024864 Msa0046700:intron
CATCGCCACCACGAGAACAT+AGG 0.569849 1_1:+79020746 None:intergenic
CTCCATGACAAACCTCAGCT+CGG 0.569887 1_1:+79021073 None:intergenic
CTGGTGAAGAAGGATGGAGT+TGG 0.572115 1_1:+79026097 None:intergenic
CCAGATTAAAGATGAGATCA+GGG 0.574580 1_1:-79022340 Msa0046700:CDS
TTCTAAAGCCTATGTTCTCG+TGG 0.575260 1_1:-79020754 Msa0046700:three_prime_UTR
GATGAAAGTGTTGTAGCCAT+GGG 0.575447 1_1:+79026187 None:intergenic
CGTCGGGATCATAGGCGCCT+AGG 0.579199 1_1:-79023302 Msa0046700:CDS
AAAGGATATATGGTACTGCA+TGG 0.580353 1_1:-79023376 Msa0046700:CDS
ACGAATTCTGAGAAGGGTGT+TGG 0.582645 1_1:+79025973 None:intergenic
TACAATAGAGATGAGGGTGG+TGG 0.585478 1_1:-79026282 Msa0046700:five_prime_UTR
AAGCCATAATGGAAAATCAC+CGG 0.586629 1_1:+79021274 None:intergenic
AGATGAAAGTGTTGTAGCCA+TGG 0.586881 1_1:+79026186 None:intergenic
CAACATGAGGTCCAGCACAT+AGG 0.588542 1_1:+79023489 None:intergenic
CCGTGTGACGAATTCTGAGA+AGG 0.591467 1_1:+79025966 None:intergenic
CTGAGGTTTGTCATGGAGAG+CGG 0.592957 1_1:-79021068 Msa0046700:CDS
TGGACCTATCAAATTGATGA+CGG 0.594779 1_1:-79022165 Msa0046700:CDS
TTATGCAGGAGGATGCTGGT+GGG 0.598218 1_1:-79023078 Msa0046700:intron
GAAACTTCTTCTCTTACAAG+GGG 0.600645 1_1:+79024577 None:intergenic
TTTGAATGAACCATACAAGA+TGG 0.602855 1_1:-79024524 Msa0046700:CDS
GATACAATACAATAGAGATG+AGG 0.604561 1_1:-79026289 None:intergenic
CCCACCAAACCTAGATCTAA+CGG 0.604671 1_1:+79020957 None:intergenic
GTTCTTATAGAGCATTATGC+CGG 0.605410 1_1:-79021293 Msa0046700:CDS
GTCGGAATCGGAGACCGCGG+CGG 0.606459 1_1:+79026033 None:intergenic
GAGAACATAGGCTTTAGAAA+CGG 0.607833 1_1:+79020758 None:intergenic
ATACAATACAATAGAGATGA+GGG 0.608705 1_1:-79026288 None:intergenic
AGCAATAGACTCAAGTTCAA+CGG 0.609015 1_1:+79023439 None:intergenic
CAGCTTCCATCTGAACTCAC+AGG 0.609275 1_1:+79020716 None:intergenic
TTTCCAGTAGATTCAACATG+AGG 0.609326 1_1:+79023476 None:intergenic
AAAATATGGCATCCGAGCTG+AGG 0.610578 1_1:-79021085 Msa0046700:CDS
AAGGATATATGGTACTGCAT+GGG 0.617021 1_1:-79023375 Msa0046700:CDS
ATCCGAGCTGAGGTTTGTCA+TGG 0.621334 1_1:-79021075 Msa0046700:CDS
TTTATGCAGGAGGATGCTGG+TGG 0.621910 1_1:-79023079 Msa0046700:intron
CGTGTGACGAATTCTGAGAA+GGG 0.623042 1_1:+79025967 None:intergenic
AACACCAAAGAATCTTTCCA+AGG 0.623750 1_1:+79021313 None:intergenic
GAGAAGAAGGACTTAACTCG+TGG 0.625056 1_1:+79026248 None:intergenic
GACCTATCAAATTGATGACG+GGG 0.628117 1_1:-79022163 Msa0046700:CDS
GTGTGCGCATGTGATGGCAA+TGG 0.630937 1_1:-79024858 Msa0046700:CDS
ATTGCTGGTGCTTACTGGAG+AGG 0.632091 1_1:-79023422 Msa0046700:CDS
TCAAAGAAGAAGCTAAACGT+CGG 0.632292 1_1:-79023319 Msa0046700:CDS
GAACTGTCTGGAAGTTTACA+CGG 0.636774 1_1:-79022743 Msa0046700:CDS
CCTAACAGGAAAATCCCGAT+AGG 0.646763 1_1:+79022796 None:intergenic
TAAAGCCTATGTTCTCGTGG+TGG 0.649753 1_1:-79020751 Msa0046700:three_prime_UTR
GAGCCCTTCCCAACCCGCCG+CGG 0.655956 1_1:-79026047 Msa0046700:CDS
CATCGAAGAACAAAGCAGGA+TGG 0.658557 1_1:-79020691 Msa0046700:three_prime_UTR
GATGGCTGTTGTAGGTGCAA+AGG 0.659873 1_1:-79021001 Msa0046700:CDS
GCGGTCGGAATCGGAGACCG+CGG 0.660960 1_1:+79026030 None:intergenic
GCTGATCTTTGGAAGATCAG+TGG 0.662223 1_1:-79022938 Msa0046700:CDS
CCTTCTCAGAATTCGTCACA+CGG 0.668959 1_1:-79025966 Msa0046700:intron
ATGAGATAAATTTATCTACA+CGG 0.670476 1_1:-79022266 Msa0046700:CDS
CCTGTGTGAAACCTCTAACG+CGG 0.672275 1_1:+79022714 None:intergenic
ACCTATCAAATTGATGACGG+GGG 0.675121 1_1:-79022162 Msa0046700:CDS
TCTATTGTATACACCACATG+TGG 0.675720 1_1:-79022966 Msa0046700:CDS
CCGCGTTAGAGGTTTCACAC+AGG 0.685509 1_1:-79022714 Msa0046700:intron
CAATTAGCTTGAATACTGCG+AGG 0.687613 1_1:-79021127 Msa0046700:intron
AAGTGTTGTAGCCATGGGAA+CGG 0.698594 1_1:+79026192 None:intergenic
CAGATTAAAGATGAGATCAG+GGG 0.715213 1_1:-79022339 Msa0046700:CDS
CAATACAATAGAGATGAGGG+TGG 0.727400 1_1:-79026285 None:intergenic
TATGTGATGTCAAAACGCTG+TGG 0.747561 1_1:+79021395 None:intergenic

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! TTCATAATAAAATAAGTAAT+GGG + chr1_1:79024203-79024222 None:intergenic 10.0%
!! TTTCATAATAAAATAAGTAA+TGG + chr1_1:79024204-79024223 None:intergenic 10.0%
!!! TTATTTTATTATGAAATCAA+TGG - chr1_1:79024208-79024227 Msa0046700:intron 10.0%
!! ACTATAACAAAAAAAAAAAA+TGG + chr1_1:79026078-79026097 None:intergenic 10.0%
!!! ATGTAATAAGTTTTTATTTG+AGG - chr1_1:79021362-79021381 Msa0046700:CDS 15.0%
!! TTAATTGAATTAAACATCAA+AGG + chr1_1:79021519-79021538 None:intergenic 15.0%
!!! GATACTTGTTATTTTATAAA+GGG + chr1_1:79021649-79021668 None:intergenic 15.0%
!!! AGATACTTGTTATTTTATAA+AGG + chr1_1:79021650-79021669 None:intergenic 15.0%
!!! TAACAAATTTATTTTGATCA+AGG + chr1_1:79022598-79022617 None:intergenic 15.0%
!!! ATCAAAATAAATTTGTTAAC+CGG - chr1_1:79022600-79022619 Msa0046700:intron 15.0%
!!! TTTTAATTCATTTCTTTAAG+AGG - chr1_1:79024288-79024307 Msa0046700:intron 15.0%
!!! CTTTGAAATATTAAAACAAT+AGG - chr1_1:79024671-79024690 Msa0046700:intron 15.0%
!!! TATTTTCAATTAATCAATAC+AGG + chr1_1:79024845-79024864 None:intergenic 15.0%
!! AGAAAAACAAAATGTTATAT+GGG + chr1_1:79024912-79024931 None:intergenic 15.0%
!! TAGAAAAACAAAATGTTATA+TGG + chr1_1:79024913-79024932 None:intergenic 15.0%
!! TATGATCATAGTTAATTAAT+GGG - chr1_1:79025542-79025561 Msa0046700:intron 15.0%
!!! TTTTATTAGTAGAATAAAGT+TGG - chr1_1:79025801-79025820 Msa0046700:intron 15.0%
!! AAGGAAAAGAAAAAGAAAAA+GGG + chr1_1:79020575-79020594 None:intergenic 20.0%
!! AAAGGAAAAGAAAAAGAAAA+AGG + chr1_1:79020576-79020595 None:intergenic 20.0%
!! TAATGAATTTGACTGAAATA+TGG - chr1_1:79021244-79021263 Msa0046700:CDS 20.0%
!! TATAAAATAACAAGTATCTC+TGG - chr1_1:79021651-79021670 Msa0046700:intron 20.0%
!! ATAAAATAACAAGTATCTCT+GGG - chr1_1:79021652-79021671 Msa0046700:intron 20.0%
!!! GTTTTATTATGACTTTGATA+TGG - chr1_1:79021932-79021951 Msa0046700:intron 20.0%
!! TACATAACTACCAAATATAA+AGG + chr1_1:79022008-79022027 None:intergenic 20.0%
!!! TTATTTCTTATATTGTCTGT+AGG - chr1_1:79022086-79022105 Msa0046700:CDS 20.0%
!! CCAATATAATAAATTGTGAT+GGG + chr1_1:79022237-79022256 None:intergenic 20.0%
!! ACCAATATAATAAATTGTGA+TGG + chr1_1:79022238-79022257 None:intergenic 20.0%
!!! ATTTTGTTGTAAACAAAATG+AGG + chr1_1:79022675-79022694 None:intergenic 20.0%
!!! CATTACTGACTTTAAAAATA+TGG + chr1_1:79022861-79022880 None:intergenic 20.0%
!!! CATATTTTTAAAGTCAGTAA+TGG - chr1_1:79022859-79022878 Msa0046700:CDS 20.0%
!! CAAAATTAGGAATCATAAAA+AGG + chr1_1:79023548-79023567 None:intergenic 20.0%
!!! TTTTATGATTCCTAATTTTG+TGG - chr1_1:79023548-79023567 Msa0046700:intron 20.0%
!!! TTTATGATTCCTAATTTTGT+GGG - chr1_1:79023549-79023568 Msa0046700:intron 20.0%
!! TTCTTCTATTAAATTTATGC+AGG - chr1_1:79023617-79023636 Msa0046700:intron 20.0%
!! TTGTATACCAAAATATGATA+AGG + chr1_1:79023879-79023898 None:intergenic 20.0%
!!! ATCATATTTTGGTATACAAA+AGG - chr1_1:79023880-79023899 Msa0046700:intron 20.0%
!! ATGAGATAAATTTATCTACA+CGG - chr1_1:79024443-79024462 Msa0046700:intron 20.0%
!! AAAACTAACCTATCTTATAT+GGG + chr1_1:79024878-79024897 None:intergenic 20.0%
!! TCCTCATTAGATTTAAAAAA+TGG - chr1_1:79025002-79025021 Msa0046700:intron 20.0%
!! CCTCATTAGATTTAAAAAAT+GGG - chr1_1:79025003-79025022 Msa0046700:intron 20.0%
!! GTATGATCATAGTTAATTAA+TGG - chr1_1:79025541-79025560 Msa0046700:intron 20.0%
!! AATAAAATCATCAATTGTCA+TGG + chr1_1:79025788-79025807 None:intergenic 20.0%
!!! TTTTTTTGTTATAGTTGCAT+TGG - chr1_1:79026083-79026102 Msa0046700:CDS 20.0%
!! GAACGATAAAATGATATTTA+CGG + chr1_1:79026168-79026187 None:intergenic 20.0%
!! CTGAATACTTCTATTAAAAT+TGG - chr1_1:79026194-79026213 Msa0046700:CDS 20.0%
!! ATTAAAATTGGATTGAAAGT+TGG - chr1_1:79026206-79026225 Msa0046700:CDS 20.0%
! AGGAAAAGAAAAAGAAAAAG+GGG + chr1_1:79020574-79020593 None:intergenic 25.0%
! TAAACACAACAAAAGTTTCA+TGG + chr1_1:79020789-79020808 None:intergenic 25.0%
!! CTAAAAAAATGGTGGAAAAT+AGG - chr1_1:79021160-79021179 Msa0046700:intron 25.0%
! TAAAATAACAAGTATCTCTG+GGG - chr1_1:79021653-79021672 Msa0046700:intron 25.0%
! AAATACTGAAACGTATTTCT+GGG - chr1_1:79021733-79021752 Msa0046700:intron 25.0%
! TAGTTTAACTAATAAGTTGC+AGG - chr1_1:79021822-79021841 Msa0046700:intron 25.0%
! AGTTTAACTAATAAGTTGCA+GGG - chr1_1:79021823-79021842 Msa0046700:intron 25.0%
! TTCAAATCTTTATCTGTCAA+AGG + chr1_1:79021960-79021979 None:intergenic 25.0%
! TGAATTATGCTACATATACA+TGG - chr1_1:79022052-79022071 Msa0046700:intron 25.0%
! CCCATCACAATTTATTATAT+TGG - chr1_1:79022234-79022253 Msa0046700:CDS 25.0%
! ACATATGTGTCTATTATTGA+GGG + chr1_1:79022525-79022544 None:intergenic 25.0%
! AACATATGTGTCTATTATTG+AGG + chr1_1:79022526-79022545 None:intergenic 25.0%
!!! TTCTTATCCTTGTTTTGATA+TGG - chr1_1:79022815-79022834 Msa0046700:CDS 25.0%
! AAAGAAAAAGTTATTGTCTG+AGG - chr1_1:79023133-79023152 Msa0046700:intron 25.0%
!!! TCTTGATTTGTTTTCTTTAC+AGG - chr1_1:79023436-79023455 Msa0046700:CDS 25.0%
! ATTTATGTACCCACAAAATT+AGG + chr1_1:79023561-79023580 None:intergenic 25.0%
! TTCTATTAAATTTATGCAGG+AGG - chr1_1:79023620-79023639 Msa0046700:intron 25.0%
!! GACACATAATTGAAGATTTT+TGG - chr1_1:79023691-79023710 Msa0046700:intron 25.0%
! ATATGATAAGGACAATTCAT+TGG + chr1_1:79023867-79023886 None:intergenic 25.0%
!! GAATTGTCCTTATCATATTT+TGG - chr1_1:79023869-79023888 Msa0046700:intron 25.0%
!! ATTACACATTAAGGTATCAT+AGG + chr1_1:79024234-79024253 None:intergenic 25.0%
!! TAAATGCAGAAACTTTGAAA+AGG + chr1_1:79024266-79024285 None:intergenic 25.0%
! AAATTGCGATAATGTTTCTT+CGG + chr1_1:79024410-79024429 None:intergenic 25.0%
!!! TTCAAAGAACTTTGAAGTTA+AGG + chr1_1:79024658-79024677 None:intergenic 25.0%
!!! AAAACAATAGGTTTTTGAAG+TGG - chr1_1:79024683-79024702 Msa0046700:intron 25.0%
! GAAAACTAACCTATCTTATA+TGG + chr1_1:79024879-79024898 None:intergenic 25.0%
!!! CCCATTTTTTAAATCTAATG+AGG + chr1_1:79025006-79025025 None:intergenic 25.0%
! TTAAAGCTTAAGCTATTAGA+TGG + chr1_1:79025114-79025133 None:intergenic 25.0%
! ATCTAATAGCTTAAGCTTTA+AGG - chr1_1:79025113-79025132 Msa0046700:intron 25.0%
! CAAAAGTAAGAGATTTAAGA+CGG + chr1_1:79025166-79025185 None:intergenic 25.0%
!!! TTAAATCTCTTACTTTTGTC+AGG - chr1_1:79025168-79025187 Msa0046700:intron 25.0%
!!! TAAATCTCTTACTTTTGTCA+GGG - chr1_1:79025169-79025188 Msa0046700:intron 25.0%
! TTAAAATCAACCTGTTTAAG+TGG + chr1_1:79025290-79025309 None:intergenic 25.0%
! ACCAACAAACTGAAAAAATA+TGG - chr1_1:79025610-79025629 Msa0046700:intron 25.0%
! AAAACAGAAAATTCCATTGA+TGG - chr1_1:79025690-79025709 Msa0046700:intron 25.0%
!!! GTCATTTTTTAACCCTTTTA+TGG - chr1_1:79026140-79026159 Msa0046700:CDS 25.0%
! ATATTTACGGTACCATAAAA+GGG + chr1_1:79026155-79026174 None:intergenic 25.0%
ATGGAGTTTAAGGAAATGAA+TGG + chr1_1:79020550-79020569 None:intergenic 30.0%
AAGAAAAAGAAAAAGGGGTA+TGG + chr1_1:79020569-79020588 None:intergenic 30.0%
GTATTTCATGTCATAGAGAA+AGG + chr1_1:79021719-79021738 None:intergenic 30.0%
GAAATACTGAAACGTATTTC+TGG - chr1_1:79021732-79021751 Msa0046700:intron 30.0%
! AATACTGAAACGTATTTCTG+GGG - chr1_1:79021734-79021753 Msa0046700:intron 30.0%
!!! TTTCTGGGGAATTATTTTTG+AGG - chr1_1:79021748-79021767 Msa0046700:intron 30.0%
!!! TTCTGGGGAATTATTTTTGA+GGG - chr1_1:79021749-79021768 Msa0046700:intron 30.0%
! TAAAACCCATTTTCTATCCA+AGG + chr1_1:79021918-79021937 None:intergenic 30.0%
GATGGTAAGTCCTTTATATT+TGG - chr1_1:79021995-79022014 Msa0046700:intron 30.0%
TGAAACTTCTTCTCTTACAA+GGG + chr1_1:79022136-79022155 None:intergenic 30.0%
TTGAAACTTCTTCTCTTACA+AGG + chr1_1:79022137-79022156 None:intergenic 30.0%
TGAAGCTCATAGAAGAATAT+TGG - chr1_1:79022161-79022180 Msa0046700:CDS 30.0%
TTTGAATGAACCATACAAGA+TGG - chr1_1:79022185-79022204 Msa0046700:CDS 30.0%
GAAAACTGATAAGAGATAGA+AGG + chr1_1:79022263-79022282 None:intergenic 30.0%
TGTTGAAGTTTAAAAGCTAG+TGG - chr1_1:79022301-79022320 Msa0046700:CDS 30.0%
GTTGAAGTTTAAAAGCTAGT+GGG - chr1_1:79022302-79022321 Msa0046700:CDS 30.0%
ATGACTATTATACACATGCA+TGG + chr1_1:79022391-79022410 None:intergenic 30.0%
CATGTGTATAATAGTCATTC+TGG - chr1_1:79022393-79022412 Msa0046700:intron 30.0%
GAGAGATAATCGTTATTGTA+TGG - chr1_1:79022420-79022439 Msa0046700:intron 30.0%
! AATTGGCTTCATGATTACTT+AGG + chr1_1:79022707-79022726 None:intergenic 30.0%
AAACTATTTGTGAACTTGTG+GGG + chr1_1:79022740-79022759 None:intergenic 30.0%
CAAACTATTTGTGAACTTGT+GGG + chr1_1:79022741-79022760 None:intergenic 30.0%
CACAAGTTCACAAATAGTTT+GGG - chr1_1:79022740-79022759 Msa0046700:CDS 30.0%
AGAACCAAAGAATTATTCCA+TGG + chr1_1:79022766-79022785 None:intergenic 30.0%
GGATAAGAAACAAAATACAG+TGG + chr1_1:79022804-79022823 None:intergenic 30.0%
AATCATGCCATATCAAAACA+AGG + chr1_1:79022825-79022844 None:intergenic 30.0%
! CAATGTTGTATGTCTGAAAT+TGG - chr1_1:79023026-79023045 Msa0046700:CDS 30.0%
! TTTTCTTTCAATGCAATGCA+AGG + chr1_1:79023121-79023140 None:intergenic 30.0%
! TTATGTTCCTTTTTCCTTGA+AGG - chr1_1:79023182-79023201 Msa0046700:intron 30.0%
AAAAAAGTTCACATAGAACG+TGG - chr1_1:79023714-79023733 Msa0046700:intron 30.0%
GTTTATAGATATGAACTGTC+TGG - chr1_1:79023954-79023973 Msa0046700:intron 30.0%
CTATGCAGTATTACACATTA+AGG + chr1_1:79024243-79024262 None:intergenic 30.0%
!! TGCACACATATTTTGTTTAG+AGG - chr1_1:79024345-79024364 Msa0046700:intron 30.0%
GAAGAAACATTATCGCAATT+TGG - chr1_1:79024409-79024428 Msa0046700:intron 30.0%
! AAAGATGCTTTGGATGATAA+AGG - chr1_1:79024520-79024539 Msa0046700:CDS 30.0%
TCAATCTTGACATCTATCTT+TGG + chr1_1:79024589-79024608 None:intergenic 30.0%
AAAGATAGATGTCAAGATTG+AGG - chr1_1:79024588-79024607 Msa0046700:CDS 30.0%
TTAAATCTAATGAGGAAGCA+AGG + chr1_1:79024998-79025017 None:intergenic 30.0%
!! AAATCTCTTACTTTTGTCAG+GGG - chr1_1:79025170-79025189 Msa0046700:intron 30.0%
AATAGTTACTACATGCAGAA+TGG + chr1_1:79025247-79025266 None:intergenic 30.0%
! AATTCCTTTTCCACTTAAAC+AGG - chr1_1:79025277-79025296 Msa0046700:intron 30.0%
!!! GCCATATTTTTTCAGTTTGT+TGG + chr1_1:79025614-79025633 None:intergenic 30.0%
ATGTGTATCATAGTGATGTT+GGG + chr1_1:79025837-79025856 None:intergenic 30.0%
AATGTGTATCATAGTGATGT+TGG + chr1_1:79025838-79025857 None:intergenic 30.0%
TTGACAATAAGCCACATTTA+TGG - chr1_1:79026116-79026135 Msa0046700:CDS 30.0%
AAAAAATGACGCCATAAATG+TGG + chr1_1:79026130-79026149 None:intergenic 30.0%
GATATTTACGGTACCATAAA+AGG + chr1_1:79026156-79026175 None:intergenic 30.0%
AATTGGATTGAAAGTTGGAT+AGG - chr1_1:79026211-79026230 Msa0046700:CDS 30.0%
! AAAAAGGGGTATGGAGTTTA+AGG + chr1_1:79020560-79020579 None:intergenic 35.0%
CATTAGTAGGGAGAACAATT+CGG + chr1_1:79020710-79020729 None:intergenic 35.0%
TGTTGGACGATTCATTAGTA+GGG + chr1_1:79020722-79020741 None:intergenic 35.0%
TGCACAGATAGTAGAAAAGA+TGG - chr1_1:79020855-79020874 Msa0046700:three_prime_UTR 35.0%
ACAGATAGTAGAAAAGATGG+TGG - chr1_1:79020858-79020877 Msa0046700:three_prime_UTR 35.0%
GAGAGAGAGAGCTAAAAAAA+TGG - chr1_1:79021149-79021168 Msa0046700:intron 35.0%
AGAGAGAGCTAAAAAAATGG+TGG - chr1_1:79021152-79021171 Msa0046700:intron 35.0%
AAGTCATATCCCACTAAGAA+GGG + chr1_1:79021302-79021321 None:intergenic 35.0%
!! ACAATTAGCACGACTGATTT+TGG - chr1_1:79021613-79021632 Msa0046700:intron 35.0%
TCATAGAGAAAGGCAGATAA+AGG + chr1_1:79021709-79021728 None:intergenic 35.0%
!!! TCTGGGGAATTATTTTTGAG+GGG - chr1_1:79021750-79021769 Msa0046700:intron 35.0%
!!! AATTATTTTTGAGGGGGTGT+TGG - chr1_1:79021757-79021776 Msa0046700:intron 35.0%
! TTGAGGGTAAAGCTTTTGAA+CGG + chr1_1:79021877-79021896 None:intergenic 35.0%
GAAGAGAATCAAGAAAGAGA+TGG - chr1_1:79021977-79021996 Msa0046700:intron 35.0%
GAAACTTCTTCTCTTACAAG+GGG + chr1_1:79022135-79022154 None:intergenic 35.0%
! ACCATACAAGATGGAGATTT+TGG - chr1_1:79022194-79022213 Msa0046700:CDS 35.0%
TCCAAAATCTCCATCTTGTA+TGG + chr1_1:79022198-79022217 None:intergenic 35.0%
! TACAAGATGGAGATTTTGGA+AGG - chr1_1:79022198-79022217 Msa0046700:CDS 35.0%
! GCTTTTAAACTTCAACATGC+AGG + chr1_1:79022298-79022317 None:intergenic 35.0%
CTATGGAGGGAAAAAGAAAT+GGG - chr1_1:79022331-79022350 Msa0046700:CDS 35.0%
! CAAGGTACTTTGTTAGAGAA+AGG + chr1_1:79022580-79022599 None:intergenic 35.0%
CCAAACTATTTGTGAACTTG+TGG + chr1_1:79022742-79022761 None:intergenic 35.0%
CCACAAGTTCACAAATAGTT+TGG - chr1_1:79022739-79022758 Msa0046700:CDS 35.0%
AAACAAAATACAGTGGAGCA+TGG + chr1_1:79022797-79022816 None:intergenic 35.0%
!! AAGTCAGTAATGGTGTTATG+AGG - chr1_1:79022869-79022888 Msa0046700:CDS 35.0%
! TAACTTCCACACTAGTTTGA+AGG + chr1_1:79022907-79022926 None:intergenic 35.0%
CTCTAAATACTTGAGCTTAG+TGG + chr1_1:79022943-79022962 None:intergenic 35.0%
ATGCTTCAGCAGAATGAAAA+TGG - chr1_1:79023002-79023021 Msa0046700:CDS 35.0%
TGAAATTGGAACTGTGAAGA+TGG - chr1_1:79023040-79023059 Msa0046700:CDS 35.0%
GGAAAAAGGAACATAAGTTG+AGG + chr1_1:79023178-79023197 None:intergenic 35.0%
TTTCCAGTAGATTCAACATG+AGG + chr1_1:79023236-79023255 None:intergenic 35.0%
AGCAATAGACTCAAGTTCAA+CGG + chr1_1:79023273-79023292 None:intergenic 35.0%
AAAAGAAACCAATGCTGCAA+AGG - chr1_1:79023315-79023334 Msa0046700:CDS 35.0%
AAAGGATATATGGTACTGCA+TGG - chr1_1:79023333-79023352 Msa0046700:CDS 35.0%
AAGGATATATGGTACTGCAT+GGG - chr1_1:79023334-79023353 Msa0046700:CDS 35.0%
TCAAAGAAGAAGCTAAACGT+CGG - chr1_1:79023390-79023409 Msa0046700:CDS 35.0%
ACAAATCAAGATCTTGTCCT+AGG + chr1_1:79023427-79023446 None:intergenic 35.0%
AACTTGCAGAACATATAGAC+AGG + chr1_1:79023475-79023494 None:intergenic 35.0%
TCTATTGTATACACCACATG+TGG - chr1_1:79023743-79023762 Msa0046700:intron 35.0%
! GTAATGGGATCAACAATCAA+TGG + chr1_1:79024188-79024207 None:intergenic 35.0%
!! ATGCTCATAAGTTGGTTCTT+TGG - chr1_1:79024312-79024331 Msa0046700:intron 35.0%
!! ATAAGTTGGTTCTTTGGTAC+AGG - chr1_1:79024318-79024337 Msa0046700:intron 35.0%
ACCAGATTAAAGATGAGATC+AGG - chr1_1:79024368-79024387 Msa0046700:intron 35.0%
CCAGATTAAAGATGAGATCA+GGG - chr1_1:79024369-79024388 Msa0046700:intron 35.0%
CAGATTAAAGATGAGATCAG+GGG - chr1_1:79024370-79024389 Msa0046700:intron 35.0%
TGTCGGAGAAGATGATATAT+GGG - chr1_1:79024477-79024496 Msa0046700:CDS 35.0%
!!! CAAAGCATCTTTTAAAGCTG+AGG + chr1_1:79024512-79024531 None:intergenic 35.0%
!! CTCAGCTTTAAAAGATGCTT+TGG - chr1_1:79024510-79024529 Msa0046700:CDS 35.0%
TGGACCTATCAAATTGATGA+CGG - chr1_1:79024544-79024563 Msa0046700:CDS 35.0%
ATCTATCTTTGGCCCATAAA+AGG + chr1_1:79024578-79024597 None:intergenic 35.0%
AAGTTAAGGAATTGCCTGTA+TGG + chr1_1:79024644-79024663 None:intergenic 35.0%
ACCTGATAGCTCTTCATTTA+AGG - chr1_1:79024726-79024745 Msa0046700:intron 35.0%
TCCTTAAATGAAGAGCTATC+AGG + chr1_1:79024730-79024749 None:intergenic 35.0%
TTGCGAAACCCATATAAGAT+AGG - chr1_1:79024867-79024886 Msa0046700:intron 35.0%
TGTTTAGCCAAACGAGATTA+AGG - chr1_1:79024965-79024984 Msa0046700:intron 35.0%
GTTTAGCCAAACGAGATTAA+GGG - chr1_1:79024966-79024985 Msa0046700:intron 35.0%
ATTAAGCCCTTAATCTCGTT+TGG + chr1_1:79024975-79024994 None:intergenic 35.0%
!! ATGACTTGTTCAAGATCCTT+TGG + chr1_1:79025053-79025072 None:intergenic 35.0%
AGGATCTTGAACAAGTCATT+AGG - chr1_1:79025054-79025073 Msa0046700:intron 35.0%
GGATCTTGAACAAGTCATTA+GGG - chr1_1:79025055-79025074 Msa0046700:intron 35.0%
GATCTTGAACAAGTCATTAG+GGG - chr1_1:79025056-79025075 Msa0046700:intron 35.0%
ATCTTGAACAAGTCATTAGG+GGG - chr1_1:79025057-79025076 Msa0046700:intron 35.0%
AAGCTTAAGCTATTAGATGG+AGG + chr1_1:79025111-79025130 None:intergenic 35.0%
TCAACCTGTTTAAGTGGAAA+AGG + chr1_1:79025284-79025303 None:intergenic 35.0%
ACTGCTCTATGGATCATTAT+AGG + chr1_1:79025368-79025387 None:intergenic 35.0%
AACACCAAAGAATCTTTCCA+AGG + chr1_1:79025399-79025418 None:intergenic 35.0%
! AAGCCATAATGGAAAATCAC+CGG + chr1_1:79025438-79025457 None:intergenic 35.0%
TGTATTGGAGAAAGCCATAA+TGG + chr1_1:79025449-79025468 None:intergenic 35.0%
GGTAAAATTCGAGCTTGTAT+TGG + chr1_1:79025464-79025483 None:intergenic 35.0%
TCTGCATTTCTTATGAGCTT+TGG + chr1_1:79025670-79025689 None:intergenic 35.0%
AAACAGTTACCGTTAGATCT+AGG - chr1_1:79025743-79025762 Msa0046700:intron 35.0%
!! GAGAACATAGGCTTTAGAAA+CGG + chr1_1:79025954-79025973 None:intergenic 35.0%
AGTTGGATAGGTAAAAATGC+TGG - chr1_1:79026223-79026242 Msa0046700:exon 35.0%
GAAAAGAGTAGAAGCCATCT+TGG + chr1_1:79020496-79020515 None:intergenic 40.0%
!! GATGAAAGTGTTGTAGCCAT+GGG + chr1_1:79020525-79020544 None:intergenic 40.0%
!! AGATGAAAGTGTTGTAGCCA+TGG + chr1_1:79020526-79020545 None:intergenic 40.0%
AATTTCCTGGTGAAGAAGGA+TGG + chr1_1:79020621-79020640 None:intergenic 40.0%
GTGTTGGACGATTCATTAGT+AGG + chr1_1:79020723-79020742 None:intergenic 40.0%
TTTATGTCGTTGACGAGTTG+AGG - chr1_1:79020830-79020849 Msa0046700:three_prime_UTR 40.0%
! TTATGTCGTTGACGAGTTGA+GGG - chr1_1:79020831-79020850 Msa0046700:three_prime_UTR 40.0%
CAAGTCATATCCCACTAAGA+AGG + chr1_1:79021303-79021322 None:intergenic 40.0%
CTTCTTAGTGGGATATGACT+TGG - chr1_1:79021301-79021320 Msa0046700:CDS 40.0%
! CTTTCTTTCTGAGAGCAATG+TGG + chr1_1:79021432-79021451 None:intergenic 40.0%
! TCTGGGGTACTCAAATTGAA+AGG - chr1_1:79021669-79021688 Msa0046700:intron 40.0%
!!! CTGGGGAATTATTTTTGAGG+GGG - chr1_1:79021751-79021770 Msa0046700:intron 40.0%
! CGATTGTGACTTTTGCTTGA+GGG + chr1_1:79021893-79021912 None:intergenic 40.0%
CCTCAAGCAAAAGTCACAAT+CGG - chr1_1:79021891-79021910 Msa0046700:intron 40.0%
CTCAAGCAAAAGTCACAATC+GGG - chr1_1:79021892-79021911 Msa0046700:intron 40.0%
!!! GGAGATTTTGGAAGGCATTA+AGG - chr1_1:79022206-79022225 Msa0046700:CDS 40.0%
! GTTTAAAAGCTAGTGGGTGA+AGG - chr1_1:79022308-79022327 Msa0046700:CDS 40.0%
GCTATGGAGGGAAAAAGAAA+TGG - chr1_1:79022330-79022349 Msa0046700:CDS 40.0%
GTATGGATCTACTAACTCTG+TGG - chr1_1:79022437-79022456 Msa0046700:intron 40.0%
CTACTAACTCTGTGGTTCTT+AGG - chr1_1:79022445-79022464 Msa0046700:intron 40.0%
!! TATCATGTGCAGCTTGTTAC+TGG - chr1_1:79022545-79022564 Msa0046700:intron 40.0%
TGGGATTGCTCTTGGATAAA+GGG - chr1_1:79022641-79022660 Msa0046700:intron 40.0%
TTCACAAATAGTTTGGGCCA+TGG - chr1_1:79022746-79022765 Msa0046700:CDS 40.0%
TGGGCCATGGAATAATTCTT+TGG - chr1_1:79022759-79022778 Msa0046700:CDS 40.0%
TGATCACCTTCAAACTAGTG+TGG - chr1_1:79022898-79022917 Msa0046700:CDS 40.0%
TTCTGCTGAAGCATGTCAAT+TGG + chr1_1:79022996-79023015 None:intergenic 40.0%
! TGTTCCTTTTTCCTTGAAGG+CGG - chr1_1:79023185-79023204 Msa0046700:intron 40.0%
GTTGAACTTGAGTCTATTGC+TGG - chr1_1:79023272-79023291 Msa0046700:intron 40.0%
CCATATATCCTTTGCAGCAT+TGG + chr1_1:79023326-79023345 None:intergenic 40.0%
CCAATGCTGCAAAGGATATA+TGG - chr1_1:79023323-79023342 Msa0046700:CDS 40.0%
CAAAGAAGAAGCTAAACGTC+GGG - chr1_1:79023391-79023410 Msa0046700:CDS 40.0%
AAATTTATGCAGGAGGATGC+TGG - chr1_1:79023627-79023646 Msa0046700:intron 40.0%
!!! TTTAGTTTTCTGGCACCCAA+AGG - chr1_1:79023656-79023675 Msa0046700:intron 40.0%
!! TTAGTTTTCTGGCACCCAAA+GGG - chr1_1:79023657-79023676 Msa0046700:intron 40.0%
ATGTGGCAAAAGCTGATCTT+TGG - chr1_1:79023760-79023779 Msa0046700:intron 40.0%
TTGGAAGATCAGTGGTCATT+TGG - chr1_1:79023779-79023798 Msa0046700:intron 40.0%
TGGTCATTTGGACTTCTACA+AGG - chr1_1:79023791-79023810 Msa0046700:intron 40.0%
!! AAAGGAAGCGTCATTCCTAT+CGG - chr1_1:79023898-79023917 Msa0046700:intron 40.0%
! CTATCGGGATTTTCCTGTTA+GGG - chr1_1:79023914-79023933 Msa0046700:intron 40.0%
GAACTGTCTGGAAGTTTACA+CGG - chr1_1:79023966-79023985 Msa0046700:intron 40.0%
! TCATGCAACCTTACTAGTCT+TGG + chr1_1:79024149-79024168 None:intergenic 40.0%
! TAAGAGGCATGCTCATAAGT+TGG - chr1_1:79024304-79024323 Msa0046700:intron 40.0%
CCCTGATCTCATCTTTAATC+TGG + chr1_1:79024372-79024391 None:intergenic 40.0%
ATGTTTCTTCGGTAAGATCC+AGG + chr1_1:79024399-79024418 None:intergenic 40.0%
! TCTTCTCCGACAGATTTTTC+AGG + chr1_1:79024469-79024488 None:intergenic 40.0%
CTGTCGGAGAAGATGATATA+TGG - chr1_1:79024476-79024495 Msa0046700:CDS 40.0%
! ATGCTTTGGATGATAAAGGC+TGG - chr1_1:79024524-79024543 Msa0046700:CDS 40.0%
! GGACCTATCAAATTGATGAC+GGG - chr1_1:79024545-79024564 Msa0046700:CDS 40.0%
!! GACCTATCAAATTGATGACG+GGG - chr1_1:79024546-79024565 Msa0046700:CDS 40.0%
!! ACCTATCAAATTGATGACGG+GGG - chr1_1:79024547-79024566 Msa0046700:CDS 40.0%
TCAAGATTGAGGATGCTCTT+GGG - chr1_1:79024599-79024618 Msa0046700:CDS 40.0%
TCTTGAACAAGTCATTAGGG+GGG - chr1_1:79025058-79025077 Msa0046700:intron 40.0%
TATGTGATGTCAAAACGCTG+TGG + chr1_1:79025317-79025336 None:intergenic 40.0%
GGATCCTTGGAAAGATTCTT+TGG - chr1_1:79025392-79025411 Msa0046700:intron 40.0%
! ATGCCGGTGATTTTCCATTA+TGG - chr1_1:79025432-79025451 Msa0046700:intron 40.0%
! CAATTAGCTTGAATACTGCG+AGG - chr1_1:79025582-79025601 Msa0046700:intron 40.0%
! ATTCCATTGATGGCTGTTGT+AGG - chr1_1:79025700-79025719 Msa0046700:intron 40.0%
GTTACCGTTAGATCTAGGTT+TGG - chr1_1:79025748-79025767 Msa0046700:intron 40.0%
ATCTTGTTCACACGTGAGTT+TGG - chr1_1:79025862-79025881 Msa0046700:intron 40.0%
GAGAAGAATGCAAGTGCAAA+AGG - chr1_1:79025884-79025903 Msa0046700:intron 40.0%
!! TTCTAAAGCCTATGTTCTCG+TGG - chr1_1:79025955-79025974 Msa0046700:intron 40.0%
TGTTCATCGAAGAACAAAGC+AGG - chr1_1:79026014-79026033 Msa0046700:CDS 40.0%
GAGAAGAAGGACTTAACTCG+TGG + chr1_1:79020464-79020483 None:intergenic 45.0%
TTGGACGAGTGTAGAGAAGA+AGG + chr1_1:79020477-79020496 None:intergenic 45.0%
TTCTCTACACTCGTCCAAGA+TGG - chr1_1:79020479-79020498 Msa0046700:three_prime_UTR 45.0%
! TACTCTTTTCACCGTTCCCA+TGG - chr1_1:79020506-79020525 Msa0046700:three_prime_UTR 45.0%
! AAGTGTTGTAGCCATGGGAA+CGG + chr1_1:79020520-79020539 None:intergenic 45.0%
GGAGAACGAAGAGAACGAAA+AGG + chr1_1:79020594-79020613 None:intergenic 45.0%
GGAGAATTTCCTGGTGAAGA+AGG + chr1_1:79020625-79020644 None:intergenic 45.0%
TAGGGAGAACAATTCGGTCT+TGG + chr1_1:79020704-79020723 None:intergenic 45.0%
! ACGAATTCTGAGAAGGGTGT+TGG + chr1_1:79020739-79020758 None:intergenic 45.0%
! CGTGTGACGAATTCTGAGAA+GGG + chr1_1:79020745-79020764 None:intergenic 45.0%
CCTTCTCAGAATTCGTCACA+CGG - chr1_1:79020743-79020762 Msa0046700:three_prime_UTR 45.0%
CATATCCCACTAAGAAGGGT+CGG + chr1_1:79021298-79021317 None:intergenic 45.0%
GGTTGTTGTCGTTGTCTTTC+TGG - chr1_1:79021322-79021341 Msa0046700:CDS 45.0%
! CCGATTGTGACTTTTGCTTG+AGG + chr1_1:79021894-79021913 None:intergenic 45.0%
ATCGGGCCTTGGATAGAAAA+TGG - chr1_1:79021909-79021928 Msa0046700:intron 45.0%
TCGGGCCTTGGATAGAAAAT+GGG - chr1_1:79021910-79021929 Msa0046700:intron 45.0%
CTGGGATTGCTCTTGGATAA+AGG - chr1_1:79022640-79022659 Msa0046700:intron 45.0%
! TGTGGGGATGATGGTGAAAT+TGG + chr1_1:79022724-79022743 None:intergenic 45.0%
TTGTGAACTTGTGGGGATGA+TGG + chr1_1:79022733-79022752 None:intergenic 45.0%
! GTTCCTTTTTCCTTGAAGGC+GGG - chr1_1:79023186-79023205 Msa0046700:intron 45.0%
! TTCCTTTTTCCTTGAAGGCG+GGG - chr1_1:79023187-79023206 Msa0046700:intron 45.0%
GGACCTCATGTTGAATCTAC+TGG - chr1_1:79023230-79023249 Msa0046700:intron 45.0%
AGTCTATTGCTGGTGCTTAC+TGG - chr1_1:79023282-79023301 Msa0046700:CDS 45.0%
AAGCTAAACGTCGGGATCAT+AGG - chr1_1:79023399-79023418 Msa0046700:CDS 45.0%
! AGATCAGCTTTTGCCACATG+TGG + chr1_1:79023759-79023778 None:intergenic 45.0%
! GCTGATCTTTGGAAGATCAG+TGG - chr1_1:79023771-79023790 Msa0046700:intron 45.0%
!! AAGGAAGCGTCATTCCTATC+GGG - chr1_1:79023899-79023918 Msa0046700:intron 45.0%
CCTAACAGGAAAATCCCGAT+AGG + chr1_1:79023916-79023935 None:intergenic 45.0%
! CCTATCGGGATTTTCCTGTT+AGG - chr1_1:79023913-79023932 Msa0046700:intron 45.0%
CCTAATTCTGCTACCCTAAC+AGG + chr1_1:79023930-79023949 None:intergenic 45.0%
CCTGTTAGGGTAGCAGAATT+AGG - chr1_1:79023927-79023946 Msa0046700:intron 45.0%
TGAAACCTCTAACGCGGAAA+AGG + chr1_1:79023992-79024011 None:intergenic 45.0%
TGAGCTTGCCAAGACTAGTA+AGG - chr1_1:79024138-79024157 Msa0046700:intron 45.0%
TTGCATGACATGACTGTCCT+GGG - chr1_1:79024161-79024180 Msa0046700:intron 45.0%
ACACGGCCTGAAAAATCTGT+CGG - chr1_1:79024460-79024479 Msa0046700:intron 45.0%
TCCCCCGTCATCAATTTGAT+AGG + chr1_1:79024551-79024570 None:intergenic 45.0%
!! TATCAAATTGATGACGGGGG+AGG - chr1_1:79024550-79024569 Msa0046700:CDS 45.0%
GTCAAGATTGAGGATGCTCT+TGG - chr1_1:79024598-79024617 Msa0046700:CDS 45.0%
CTTGAAGCAGGAAGATGCAA+AGG + chr1_1:79025029-79025048 None:intergenic 45.0%
CTTTGCATCTTCCTGCTTCA+AGG - chr1_1:79025027-79025046 Msa0046700:intron 45.0%
!! CTTACTTTTGTCAGGGGTTG+TGG - chr1_1:79025176-79025195 Msa0046700:intron 45.0%
ATGATCCATAGAGCAGTGCT+TGG - chr1_1:79025371-79025390 Msa0046700:intron 45.0%
TTTACCTGTTACTGATGCCC+AGG - chr1_1:79025478-79025497 Msa0046700:intron 45.0%
CAAGTAGTCGAACGTTACCT+GGG + chr1_1:79025498-79025517 None:intergenic 45.0%
TCAAGTAGTCGAACGTTACC+TGG + chr1_1:79025499-79025518 None:intergenic 45.0%
AAAATATGGCATCCGAGCTG+AGG - chr1_1:79025624-79025643 Msa0046700:intron 45.0%
ACCGTTAGATCTAGGTTTGG+TGG - chr1_1:79025751-79025770 Msa0046700:intron 45.0%
CCCACCAAACCTAGATCTAA+CGG + chr1_1:79025755-79025774 None:intergenic 45.0%
! CCGTTAGATCTAGGTTTGGT+GGG - chr1_1:79025752-79025771 Msa0046700:intron 45.0%
!! CGTTAGATCTAGGTTTGGTG+GGG - chr1_1:79025753-79025772 Msa0046700:intron 45.0%
TAAAGCCTATGTTCTCGTGG+TGG - chr1_1:79025958-79025977 Msa0046700:intron 45.0%
CATCGAAGAACAAAGCAGGA+TGG - chr1_1:79026018-79026037 Msa0046700:CDS 45.0%
CTGGTGAAGAAGGATGGAGT+TGG + chr1_1:79020615-79020634 None:intergenic 50.0%
CAACTCCATCCTTCTTCACC+AGG - chr1_1:79020613-79020632 Msa0046700:three_prime_UTR 50.0%
AACAATTCGGTCTTGGCGGT+CGG + chr1_1:79020697-79020716 None:intergenic 50.0%
GGAGAACAATTCGGTCTTGG+CGG + chr1_1:79020701-79020720 None:intergenic 50.0%
! CCGTGTGACGAATTCTGAGA+AGG + chr1_1:79020746-79020765 None:intergenic 50.0%
ATGTAGCCGACCCTTCTTAG+TGG - chr1_1:79021289-79021308 Msa0046700:CDS 50.0%
TGTAGCCGACCCTTCTTAGT+GGG - chr1_1:79021290-79021309 Msa0046700:CDS 50.0%
! CTTTCTGAGAGCAATGTGGC+AGG + chr1_1:79021428-79021447 None:intergenic 50.0%
CAAAAGTCACAATCGGGCCT+TGG - chr1_1:79021898-79021917 Msa0046700:intron 50.0%
! AAGCTAGTGGGTGAAGGCTA+TGG - chr1_1:79022314-79022333 Msa0046700:CDS 50.0%
! TAGTGGGTGAAGGCTATGGA+GGG - chr1_1:79022318-79022337 Msa0046700:CDS 50.0%
AGCAAGGACTTAGAGAGGAC+CGG + chr1_1:79022622-79022641 None:intergenic 50.0%
GTCCTCTCTAAGTCCTTGCT+GGG - chr1_1:79022622-79022641 Msa0046700:intron 50.0%
ATCCCAGCAAGGACTTAGAG+AGG + chr1_1:79022627-79022646 None:intergenic 50.0%
ATCCAAGAGCAATCCCAGCA+AGG + chr1_1:79022638-79022657 None:intergenic 50.0%
CAACATGAGGTCCAGCACAT+AGG + chr1_1:79023223-79023242 None:intergenic 50.0%
ATTGCTGGTGCTTACTGGAG+AGG - chr1_1:79023287-79023306 Msa0046700:CDS 50.0%
TTTATGCAGGAGGATGCTGG+TGG - chr1_1:79023630-79023649 Msa0046700:intron 50.0%
TTATGCAGGAGGATGCTGGT+GGG - chr1_1:79023631-79023650 Msa0046700:intron 50.0%
!!! CTGGTGGGGGTTTAGTTTTC+TGG - chr1_1:79023646-79023665 Msa0046700:intron 50.0%
GTCTCACGATAGCACCCTTT+GGG + chr1_1:79023674-79023693 None:intergenic 50.0%
TGTCTCACGATAGCACCCTT+TGG + chr1_1:79023675-79023694 None:intergenic 50.0%
CCTGTGTGAAACCTCTAACG+CGG + chr1_1:79023998-79024017 None:intergenic 50.0%
GTTGCATGACATGACTGTCC+TGG - chr1_1:79024160-79024179 Msa0046700:intron 50.0%
TGCATGACATGACTGTCCTG+GGG - chr1_1:79024162-79024181 Msa0046700:intron 50.0%
GATCAACAATCAATGGCCCC+AGG + chr1_1:79024181-79024200 None:intergenic 50.0%
AGGATGCTCTTGGGAGAAAG+TGG - chr1_1:79024608-79024627 Msa0046700:intron 50.0%
GTGGCAGTGTTCAACCATAC+AGG - chr1_1:79024627-79024646 Msa0046700:intron 50.0%
TCTTCCTGCTTCAAGGCCAA+AGG - chr1_1:79025034-79025053 Msa0046700:intron 50.0%
!! AGATCCTTTGGCCTTGAAGC+AGG + chr1_1:79025041-79025060 None:intergenic 50.0%
! AGGATCCAAGCACTGCTCTA+TGG + chr1_1:79025379-79025398 None:intergenic 50.0%
TAGAGCAGTGCTTGGATCCT+TGG - chr1_1:79025379-79025398 Msa0046700:intron 50.0%
GTTACCTGGGCATCAGTAAC+AGG + chr1_1:79025485-79025504 None:intergenic 50.0%
ATCCGAGCTGAGGTTTGTCA+TGG - chr1_1:79025634-79025653 Msa0046700:intron 50.0%
CTCCATGACAAACCTCAGCT+CGG + chr1_1:79025639-79025658 None:intergenic 50.0%
CTGAGGTTTGTCATGGAGAG+CGG - chr1_1:79025641-79025660 Msa0046700:intron 50.0%
GCACCTACAACAGCCATCAA+TGG + chr1_1:79025706-79025725 None:intergenic 50.0%
GATGGCTGTTGTAGGTGCAA+AGG - chr1_1:79025708-79025727 Msa0046700:intron 50.0%
CAGCTTCCATCTGAACTCAC+AGG + chr1_1:79025996-79026015 None:intergenic 50.0%
!! AGAGATGAGGGTGGTGGACT+TGG - chr1_1:79020433-79020452 Msa0046700:three_prime_UTR 55.0%
GGCGAGAGTGGAGAATTTCC+TGG + chr1_1:79020634-79020653 None:intergenic 55.0%
GTTGCAGTGTGCGCATGTGA+TGG - chr1_1:79021845-79021864 Msa0046700:intron 55.0%
GTGTGCGCATGTGATGGCAA+TGG - chr1_1:79021851-79021870 Msa0046700:intron 55.0%
! CTAGTGGGTGAAGGCTATGG+AGG - chr1_1:79022317-79022336 Msa0046700:CDS 55.0%
GGTCCTCTCTAAGTCCTTGC+TGG - chr1_1:79022621-79022640 Msa0046700:intron 55.0%
GTCCTTGCTGGGATTGCTCT+TGG - chr1_1:79022633-79022652 Msa0046700:intron 55.0%
CTCCCCGCCTTCAAGGAAAA+AGG + chr1_1:79023192-79023211 None:intergenic 55.0%
! TTTTCCTTGAAGGCGGGGAG+TGG - chr1_1:79023192-79023211 Msa0046700:intron 55.0%
TATGCAGGAGGATGCTGGTG+GGG - chr1_1:79023632-79023651 Msa0046700:intron 55.0%
CCGCGTTAGAGGTTTCACAC+AGG - chr1_1:79023995-79024014 Msa0046700:intron 55.0%
!! AGATGAGATCAGGGGTGTCC+TGG - chr1_1:79024378-79024397 Msa0046700:intron 55.0%
!!! ACGGGGGAGGTGCCTTTTAT+GGG - chr1_1:79024563-79024582 Msa0046700:CDS 55.0%
!! TCTAGGTTTGGTGGGGAGCT+TGG - chr1_1:79025760-79025779 Msa0046700:intron 55.0%
CATCGCCACCACGAGAACAT+AGG + chr1_1:79025966-79025985 None:intergenic 55.0%
! CTATGTTCTCGTGGTGGCGA+TGG - chr1_1:79025964-79025983 Msa0046700:intron 55.0%
CTGCTGCCTGTGAGTTCAGA+TGG - chr1_1:79025987-79026006 Msa0046700:CDS 55.0%
TCGGTCTTGGCGGTCGGAAT+CGG + chr1_1:79020691-79020710 None:intergenic 60.0%
! GAGTGGTGGGACCTATGTGC+TGG - chr1_1:79023209-79023228 Msa0046700:intron 60.0%
ATGCAGGAGGATGCTGGTGG+GGG - chr1_1:79023633-79023652 Msa0046700:intron 60.0%
! CACGGCCTTTTCCGCGTTAG+AGG - chr1_1:79023984-79024003 Msa0046700:intron 60.0%
!!! GACGGGGGAGGTGCCTTTTA+TGG - chr1_1:79024562-79024581 Msa0046700:CDS 60.0%
TTGGGAAGGGCTCGTGGCGA+CGG + chr1_1:79020655-79020674 None:intergenic 65.0%
TCCTTGAAGGCGGGGAGTGG+TGG - chr1_1:79023195-79023214 Msa0046700:intron 65.0%
CCTTGAAGGCGGGGAGTGGT+GGG - chr1_1:79023196-79023215 Msa0046700:intron 65.0%
CGTCGGGATCATAGGCGCCT+AGG - chr1_1:79023407-79023426 Msa0046700:CDS 65.0%
!! AGACCGCGGCGGGTTGGGAA+GGG + chr1_1:79020668-79020687 None:intergenic 70.0%
! ATCGGAGACCGCGGCGGGTT+GGG + chr1_1:79020673-79020692 None:intergenic 70.0%
AATCGGAGACCGCGGCGGGT+TGG + chr1_1:79020674-79020693 None:intergenic 70.0%
TCGGAATCGGAGACCGCGGC+GGG + chr1_1:79020678-79020697 None:intergenic 70.0%
GTCGGAATCGGAGACCGCGG+CGG + chr1_1:79020679-79020698 None:intergenic 70.0%
GCGGTCGGAATCGGAGACCG+CGG + chr1_1:79020682-79020701 None:intergenic 70.0%
CCCACCACTCCCCGCCTTCA+AGG + chr1_1:79023199-79023218 None:intergenic 70.0%
GCTCGTGGCGACGGCGAGAG+TGG + chr1_1:79020646-79020665 None:intergenic 75.0%
!! GGCGGGTTGGGAAGGGCTCG+TGG + chr1_1:79020661-79020680 None:intergenic 75.0%
GAGCCCTTCCCAACCCGCCG+CGG - chr1_1:79020662-79020681 Msa0046700:three_prime_UTR 75.0%
!! GAGACCGCGGCGGGTTGGGA+AGG + chr1_1:79020669-79020688 None:intergenic 75.0%
Chromosome Type Strat End Strand Name
chr1_1 gene 79020430 79026301 79020430 ID=Msa0046700;Name=Msa0046700
chr1_1 mRNA 79020430 79026301 79020430 ID=Msa0046700-mRNA-1;Parent=Msa0046700;Name=Msa0046700-mRNA-1;_AED=0.01;_eAED=0.01;_QI=68|1|1|1|1|1|8|452|654
chr1_1 exon 79020430 79021142 79020430 ID=Msa0046700-mRNA-1:exon:27222;Parent=Msa0046700-mRNA-1
chr1_1 exon 79021232 79021432 79021232 ID=Msa0046700-mRNA-1:exon:27221;Parent=Msa0046700-mRNA-1
chr1_1 exon 79022083 79022391 79022083 ID=Msa0046700-mRNA-1:exon:27220;Parent=Msa0046700-mRNA-1
chr1_1 exon 79022715 79023092 79022715 ID=Msa0046700-mRNA-1:exon:27219;Parent=Msa0046700-mRNA-1
chr1_1 exon 79023274 79023527 79023274 ID=Msa0046700-mRNA-1:exon:27218;Parent=Msa0046700-mRNA-1
chr1_1 exon 79024476 79024623 79024476 ID=Msa0046700-mRNA-1:exon:27217;Parent=Msa0046700-mRNA-1
chr1_1 exon 79024733 79024879 79024733 ID=Msa0046700-mRNA-1:exon:27216;Parent=Msa0046700-mRNA-1
chr1_1 exon 79025967 79026301 79025967 ID=Msa0046700-mRNA-1:exon:27215;Parent=Msa0046700-mRNA-1
chr1_1 five_prime_UTR 79026234 79026301 79026234 ID=Msa0046700-mRNA-1:five_prime_utr;Parent=Msa0046700-mRNA-1
chr1_1 CDS 79025967 79026233 79025967 ID=Msa0046700-mRNA-1:cds;Parent=Msa0046700-mRNA-1
chr1_1 CDS 79024733 79024879 79024733 ID=Msa0046700-mRNA-1:cds;Parent=Msa0046700-mRNA-1
chr1_1 CDS 79024476 79024623 79024476 ID=Msa0046700-mRNA-1:cds;Parent=Msa0046700-mRNA-1
chr1_1 CDS 79023274 79023527 79023274 ID=Msa0046700-mRNA-1:cds;Parent=Msa0046700-mRNA-1
chr1_1 CDS 79022715 79023092 79022715 ID=Msa0046700-mRNA-1:cds;Parent=Msa0046700-mRNA-1
chr1_1 CDS 79022083 79022391 79022083 ID=Msa0046700-mRNA-1:cds;Parent=Msa0046700-mRNA-1
chr1_1 CDS 79021232 79021432 79021232 ID=Msa0046700-mRNA-1:cds;Parent=Msa0046700-mRNA-1
chr1_1 CDS 79020882 79021142 79020882 ID=Msa0046700-mRNA-1:cds;Parent=Msa0046700-mRNA-1
chr1_1 three_prime_UTR 79020430 79020881 79020430 ID=Msa0046700-mRNA-1:three_prime_utr;Parent=Msa0046700-mRNA-1
Gene Sequence

>Msa0046700

ATGGCTTCTACTCTTTTCACCGTTCCCATGGCTACAACACTTTCATCTTCCATTCATTTCCTTAAACTCCATACCCCTTTTTCTTTTTCTTTTCCTTTTCGTTCTCTTCGTTCTCCAACTCCATCCTTCTTCACCAGGAAATTCTCCACTCTCGCCGTCGCCACGAGCCCTTCCCAACCCGCCGCGGTCTCCGATTCCGACCGCCAAGACCGAATTGTTCTCCCTACTAATGAATCGTCCAACACCCTTCTCAGAATTCGTCACACGTGTGCGCATGTGATGGCAATGGCCGTTCAAAAGCTTTACCCTCAAGCAAAAGTCACAATCGGGCCTTGGATAGAAAATGGGTTTTATTATGACTTTGATATGGAGCCTTTGACAGATAAAGATTTGAAGAGAATCAAGAAAGAGATGGATCGAATTATTAGCAAAAATTTACCCCTTGTAAGAGAAGAAGTTTCAAGAGATGAAGCTCATAGAAGAATATTGGCTTTGAATGAACCATACAAGATGGAGATTTTGGAAGGCATTAAGGAAGAACCCATCACAATTTATTATATTGGCGGGGAGTGGTGGGACCTATGTGCTGGACCTCATGTTGAATCTACTGGAAATATCAAAAGAAATGCCGTTGAACTTGAGTCTATTGCTGGTGCTTACTGGAGAGGAGATGAAAAGAAACCAATGCTGCAAAGGATATATGGTACTGCATGGGAGACTGAAGAGCAGTTGAAAGCGTATCTTCATTTCAAAGAAGAAGCTAAACGTCGGGATCATAGGCGCCTAGGACAAGATCTTGATTTGTTTTCTTTACAGGAGGATGCTGGTGGGGGTTTAGTTTTCTGGCACCCAAAGGGTGCTATCGTGAGACACATAATTGAAGATTTTTGGAAAAAAGTTCACATAGAACGTGGTTATGATCTATTGTATACACCACATGTGGCAAAAGCTGATCTTTGGAAGATCAGTGGTCATTTGGACTTCTACAAGGAAAATATGTATGATCAGATGAGCATCGAAGATGAGCAGTATCAACTTCGACCAATGAATTGTCCTTATCATATTTTGGTATACAAAAGGAAGCGTCATTCCTATCGGGATTTTCCTGTTAGGGTAGCAGAATTAGGTACTGTTTATAGATATGAACTGTCTGGAAGTTTACACGGCCTTTTCCGCGTTAGAGGTTTCACACAGGATGATGCACACATATTTTGTTTAGAGGACCAGATTAAAGATGAGATCAGGGGTGTCCTGGATCTTACCGAAGAAACATTATCGCAATTTGGTTTTGATAAATATGAGATAAATTTATCTACACGGCCTGAAAAATCTGTCGGAGAAGATGATATATGGGAGAAAGCTACCTCAGCTTTAAAAGATGCTTTGGATGATAAAGGCTGGACCTATCAAATTGATGACGGGGGAGGTGCCTTTTATGGGCCAAAGATAGATGTCAAGATTGAGGATGCTCTTGGGAGAAAGTGGCAGTGTTCAACCATACAGGTTGATTTTAATTTACCACAGCGTTTTGACATCACATATGTCGACTCTAACTCTGAAAAAAAGAGACCTATAATGATCCATAGAGCAGTGCTTGGATCCTTGGAAAGATTCTTTGGTGTTCTTATAGAGCATTATGCCGGTGATTTTCCATTATGGCTTTCTCCAATACAAGCTCGAATTTTACCTGTTACTGATGCCCAGCTTGAATACTGCGAGGATGTGACCAACAAACTGAAAAAATATGGCATCCGAGCTGAGGTTTGTCATGGAGAGCGGCTGCCAAAGCTCATAAGAAATGCAGAAAAACAGAAAATTCCATTGATGGCTGTTGTAGGTGCAAAGGAAATTGAAACACAAACAGTTACCGTTAGATCTAGGTTTGGTGGGGAGCTTGGAACCATGACAATTGATGATTTTATTAGTAGAATAAAGTTGGCAATAGAAAACCCAACATCACTATGA

Protein sequence

>Msa0046700

MASTLFTVPMATTLSSSIHFLKLHTPFSFSFPFRSLRSPTPSFFTRKFSTLAVATSPSQPAAVSDSDRQDRIVLPTNESSNTLLRIRHTCAHVMAMAVQKLYPQAKVTIGPWIENGFYYDFDMEPLTDKDLKRIKKEMDRIISKNLPLVREEVSRDEAHRRILALNEPYKMEILEGIKEEPITIYYIGGEWWDLCAGPHVESTGNIKRNAVELESIAGAYWRGDEKKPMLQRIYGTAWETEEQLKAYLHFKEEAKRRDHRRLGQDLDLFSLQEDAGGGLVFWHPKGAIVRHIIEDFWKKVHIERGYDLLYTPHVAKADLWKISGHLDFYKENMYDQMSIEDEQYQLRPMNCPYHILVYKRKRHSYRDFPVRVAELGTVYRYELSGSLHGLFRVRGFTQDDAHIFCLEDQIKDEIRGVLDLTEETLSQFGFDKYEINLSTRPEKSVGEDDIWEKATSALKDALDDKGWTYQIDDGGGAFYGPKIDVKIEDALGRKWQCSTIQVDFNLPQRFDITYVDSNSEKKRPIMIHRAVLGSLERFFGVLIEHYAGDFPLWLSPIQARILPVTDAQLEYCEDVTNKLKKYGIRAEVCHGERLPKLIRNAEKQKIPLMAVVGAKEIETQTVTVRSRFGGELGTMTIDDFISRIKLAIENPTSL*