AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar zhongmu-4 / Msa0606680


Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0606680 MtrunA17_Chr4g0037681 94.064 219 5 1 31 241 1 219 1.64e-153 426
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0606680 AT3G19900.1 70.886 158 40 1 84 241 67 218 7.28e-72 220
Msa0606680 AT3G19900.2 57.292 96 35 1 84 179 67 156 3.78e-27 103

Find 63 sgRNAs with CRISPR-Local

Find 586 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
ACTCTTATCAGGAACAAATA+TGG 0.244535 4_2:+53286766 Msa0606680:CDS
TTGACCTTGCTACTCTTATC+AGG 0.271521 4_2:+53286755 Msa0606680:CDS
TTTGGTTAGTTTAAGGTTAG+AGG 0.304766 4_2:+53293327 Msa0606680:intron
CCACCTTAGGTGCATGGATT+AGG 0.316591 4_2:+53284660 Msa0606680:CDS
ATTTATGTTGAGCAACATTA+AGG 0.318243 4_2:-53285599 None:intergenic
GGGGAGCTGTTTCACATATT+CGG 0.324568 4_2:+53287652 Msa0606680:CDS
GTCATTATCATCTGAATCAT+AGG 0.330530 4_2:-53285685 None:intergenic
CAGTACAGTGAGTGACAATA+TGG 0.345555 4_2:+53285659 Msa0606680:CDS
TGCAAACTCGTTAAAATGTT+GGG 0.348396 4_2:+53287632 Msa0606680:CDS
TTATTAATACTTCCTTTGTC+AGG 0.354603 4_2:-53285531 None:intergenic
TAATTTATGCTAGGAATTCA+TGG 0.369879 4_2:+53286987 Msa0606680:intron
AACTAACCTTCTTAATCAAC+TGG 0.375297 4_2:-53286804 None:intergenic
ATTAAGGAAGTCTAATCCTT+TGG 0.378502 4_2:-53285583 None:intergenic
TTGGCTTATGAATGAATTAG+AGG 0.380578 4_2:+53284610 Msa0606680:CDS
TGGTTGGCCTCTAAGAATTC+AGG 0.385634 4_2:+53285503 Msa0606680:CDS
GGAAGATTTCAATCAATTGA+TGG 0.407332 4_2:+53293384 Msa0606680:CDS
CTCTTATCAGGAACAAATAT+GGG 0.420619 4_2:+53286767 Msa0606680:CDS
ATTTCTAAGTTCACCACCTT+AGG 0.423161 4_2:+53284647 Msa0606680:CDS
TTGCAAACTCGTTAAAATGT+TGG 0.438360 4_2:+53287631 Msa0606680:CDS
CATATTGTCACTCACTGTAC+TGG 0.450902 4_2:-53285658 None:intergenic
TGATGTCCAGTTGATTAAGA+AGG 0.453415 4_2:+53286798 Msa0606680:CDS
ACAGATGATTCAAGGTTTAG+TGG 0.456616 4_2:+53286730 Msa0606680:CDS
CGAAAGAACGACCTCGGATA+GGG 0.464263 4_2:+53287691 Msa0606680:CDS
TTTATAGATATGGACGAGTC+CGG 0.477851 4_2:+53287901 Msa0606680:CDS
GTCGTTCTTTCGACTTTGCT+AGG 0.484164 4_2:-53287680 None:intergenic
GGGTGATCCTGAATTCTTAG+AGG 0.485445 4_2:-53285510 None:intergenic
TCGAAAGAACGACCTCGGAT+AGG 0.487536 4_2:+53287690 Msa0606680:CDS
AATATATTCTTCTTCAGTCA+AGG 0.492732 4_2:-53287592 None:intergenic
AAGGAAGTCTAATCCTTTGG+AGG 0.499539 4_2:-53285580 None:intergenic
TAGTCGGTACAGATGATTCA+AGG 0.503976 4_2:+53286722 Msa0606680:CDS
ATATATTCTTCTTCAGTCAA+GGG 0.512865 4_2:-53287591 None:intergenic
TCATTATCATCTGAATCATA+GGG 0.525942 4_2:-53285684 None:intergenic
TATTAATACTTCCTTTGTCA+GGG 0.527073 4_2:-53285530 None:intergenic
ATGATCAGGTGAATAGTGAC+AGG 0.536819 4_2:+53286677 Msa0606680:CDS
CATCCTAATCCATGCACCTA+AGG 0.541674 4_2:-53284663 None:intergenic
CCACTCGTTCGCACGTGCAC+CGG 0.543129 4_2:-53287920 None:intergenic
TGTCCACCCACCAGTGTGGT+TGG 0.544450 4_2:+53285487 Msa0606680:CDS
AATTTATGCTAGGAATTCAT+GGG 0.548556 4_2:+53286988 Msa0606680:intron
CAGAATAATGATGAAATCAA+AGG 0.553196 4_2:+53285720 Msa0606680:CDS
GAATGTCATGTGGAAGTACA+TGG 0.561058 4_2:+53287029 Msa0606680:CDS
GGATATCATTCTCCCTCCAA+AGG 0.564889 4_2:+53285567 Msa0606680:intron
AGTTCACCACCTTAGGTGCA+TGG 0.567395 4_2:+53284654 Msa0606680:CDS
CCTAATCCATGCACCTAAGG+TGG 0.574773 4_2:-53284660 None:intergenic
CTTAGGTGCATGGATTAGGA+TGG 0.579542 4_2:+53284664 Msa0606680:CDS
GCAAACTCGTTAAAATGTTG+GGG 0.580293 4_2:+53287633 Msa0606680:CDS
CATGTGGAAGTACATGGAGC+AGG 0.580471 4_2:+53287035 Msa0606680:CDS
GCCATACTGCCAGAAAATGT+AGG 0.581926 4_2:+53285625 Msa0606680:CDS
TTCTTAGAGGCCAACCACAC+TGG 0.581947 4_2:-53285497 None:intergenic
TATATTCTTCTTCAGTCAAG+GGG 0.582965 4_2:-53287590 None:intergenic
AGGAAGTCTAATCCTTTGGA+GGG 0.584257 4_2:-53285579 None:intergenic
GGTGCATGGATTAGGATGGA+TGG 0.592177 4_2:+53284668 Msa0606680:CDS
TCCACATGACATTCATAGCA+AGG 0.612755 4_2:-53287020 None:intergenic
GAAAGTCTCGAGAAAATAGT+CGG 0.613761 4_2:+53286706 Msa0606680:CDS
TTAGAGGCCAACCACACTGG+TGG 0.619099 4_2:-53285494 None:intergenic
ATTCAGGATCACCCTGACAA+AGG 0.623380 4_2:+53285519 Msa0606680:CDS
TGTTCCTGATAAGAGTAGCA+AGG 0.634017 4_2:-53286759 None:intergenic
AGGCCAACCACACTGGTGGG+TGG 0.635187 4_2:-53285490 None:intergenic
TAGAGGCCAACCACACTGGT+GGG 0.636716 4_2:-53285493 None:intergenic
AGAACGACCTCGGATAGGGA+AGG 0.655521 4_2:+53287695 Msa0606680:CDS
CAAAGTCGAAAGAACGACCT+CGG 0.659433 4_2:+53287685 Msa0606680:CDS
TCCTTGCTATGAATGTCATG+TGG 0.672616 4_2:+53287019 Msa0606680:CDS
TTTGTTCGACAACGATTGCG+AGG 0.686305 4_2:+53293363 Msa0606680:CDS
ATTATGTCCACCCACCAGTG+TGG 0.725293 4_2:+53285483 Msa0606680:CDS

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! ATATATATATATATATATAT+TGG + chr4_2:53290411-53290430 Msa0606680:intron 0.0%
!! AATATTAATTATGAAAAAGT+GGG - chr4_2:53290348-53290367 None:intergenic 10.0%
!! AAATATTAATTATGAAAAAG+TGG - chr4_2:53290349-53290368 None:intergenic 10.0%
!! ATTAATATTTAAGTGATTTA+TGG + chr4_2:53290359-53290378 Msa0606680:intron 10.0%
!! TAGAAATAATTAAATTACTA+GGG + chr4_2:53290519-53290538 Msa0606680:intron 10.0%
!! TTTACATCATTATAAATAAT+GGG - chr4_2:53291316-53291335 None:intergenic 10.0%
!! ATTTACATCATTATAAATAA+TGG - chr4_2:53291317-53291336 None:intergenic 10.0%
!!! TTTTAATGAAATTTTTAAGT+TGG + chr4_2:53291878-53291897 Msa0606680:intron 10.0%
!!! TTTAATGAAATTTTTAAGTT+GGG + chr4_2:53291879-53291898 Msa0606680:intron 10.0%
!!! TCAAGAAAGTATTAAATATT+TGG - chr4_2:53285102-53285121 None:intergenic 15.0%
!! AATTAAGAGAATATATGTAA+AGG - chr4_2:53286341-53286360 None:intergenic 15.0%
!!! TTTTTTTTAGAAAAATGATC+AGG + chr4_2:53286663-53286682 Msa0606680:intron 15.0%
!! TAGCATAAATTATGAAAATA+AGG - chr4_2:53286979-53286998 None:intergenic 15.0%
!!! TTATTTTCATAATTTATGCT+AGG + chr4_2:53286978-53286997 Msa0606680:intron 15.0%
!! ATATCATATGTAAATAGATT+GGG + chr4_2:53287741-53287760 Msa0606680:intron 15.0%
!!! AATATAAGTATTTTCTTAAG+TGG + chr4_2:53290476-53290495 Msa0606680:intron 15.0%
!!! ATATAAGTATTTTCTTAAGT+GGG + chr4_2:53290477-53290496 Msa0606680:intron 15.0%
!! GTAGAAATAATTAAATTACT+AGG + chr4_2:53290518-53290537 Msa0606680:intron 15.0%
!! AGAAATAATTAAATTACTAG+GGG + chr4_2:53290520-53290539 Msa0606680:intron 15.0%
!!! TTATTGAATTTTATAAAGAC+AGG + chr4_2:53291761-53291780 Msa0606680:intron 15.0%
!! TTTAACAACAATATAATGAT+GGG - chr4_2:53291809-53291828 None:intergenic 15.0%
!! ATTTAACAACAATATAATGA+TGG - chr4_2:53291810-53291829 None:intergenic 15.0%
!! TAAATAAGACTAAAATGTTT+CGG - chr4_2:53293086-53293105 None:intergenic 15.0%
!!! TATAAATCATTGACTGAAAT+CGG - chr4_2:53284926-53284945 None:intergenic 20.0%
!! TTAAAATTCAGTTACAAAAG+TGG + chr4_2:53285303-53285322 Msa0606680:intron 20.0%
!!! TATATTGTTTTTTGTTACGA+AGG + chr4_2:53285830-53285849 Msa0606680:intron 20.0%
!! TAGAAATTCTTTGTAAGAAA+TGG + chr4_2:53285934-53285953 Msa0606680:intron 20.0%
!!! TTCTACTTTTAATTGTTCAT+AGG + chr4_2:53285962-53285981 Msa0606680:intron 20.0%
!! CCAAAATTATATCTAATGTA+GGG - chr4_2:53286071-53286090 None:intergenic 20.0%
!!! TCTAAGATACAACATAAAAA+AGG + chr4_2:53286155-53286174 Msa0606680:intron 20.0%
!! AACTAAAAACAAAAAGATAG+AGG - chr4_2:53286453-53286472 None:intergenic 20.0%
!! TTTACCAAAACATATGATTA+CGG - chr4_2:53286523-53286542 None:intergenic 20.0%
!! GAGAAAAAAGCAATAAAAAA+GGG - chr4_2:53286913-53286932 None:intergenic 20.0%
!! AGAGAAAAAAGCAATAAAAA+AGG - chr4_2:53286914-53286933 None:intergenic 20.0%
!! CATATCATATGTAAATAGAT+TGG + chr4_2:53287740-53287759 Msa0606680:intron 20.0%
!! CAAATAACAAGAAGTTATAA+GGG - chr4_2:53287863-53287882 None:intergenic 20.0%
!!! AAGATTTGAAGAAAATGTTT+TGG + chr4_2:53289094-53289113 Msa0606680:intron 20.0%
!! ACAGGAAAAGTAATATTAAT+CGG - chr4_2:53289351-53289370 None:intergenic 20.0%
!!! TATAAGTATTTTCTTAAGTG+GGG + chr4_2:53290478-53290497 Msa0606680:intron 20.0%
!! TCATCTATAATATAAACATC+AGG - chr4_2:53290935-53290954 None:intergenic 20.0%
!! ATTAAACAAAATACGTAACA+AGG - chr4_2:53291640-53291659 None:intergenic 20.0%
!!! AAATTTTTAAGTTGGGAAAA+CGG + chr4_2:53291886-53291905 Msa0606680:intron 20.0%
!!! AAAGTATTGCCTTTATTAAT+AGG + chr4_2:53292399-53292418 Msa0606680:intron 20.0%
!! TCATCTATACCTATTAATAA+AGG - chr4_2:53292411-53292430 None:intergenic 20.0%
!! AGAAAAAAAAAACAACAACT+AGG + chr4_2:53292450-53292469 Msa0606680:intron 20.0%
!!! TGGTAAAACAATATTGATTA+AGG - chr4_2:53293142-53293161 None:intergenic 20.0%
! TAAGATATTCTTCTTATCGA+TGG + chr4_2:53284769-53284788 Msa0606680:intron 25.0%
! AATCTTCAAATATTGATCGT+CGG + chr4_2:53284965-53284984 Msa0606680:intron 25.0%
! TGTGGATAAAAAACAAATTG+GGG - chr4_2:53285148-53285167 None:intergenic 25.0%
! GTGTGGATAAAAAACAAATT+GGG - chr4_2:53285149-53285168 None:intergenic 25.0%
! TGTGTGGATAAAAAACAAAT+TGG - chr4_2:53285150-53285169 None:intergenic 25.0%
! TTAAAACTAGTTGTATGACA+TGG - chr4_2:53285287-53285306 None:intergenic 25.0%
! TATTAATACTTCCTTTGTCA+GGG - chr4_2:53285533-53285552 None:intergenic 25.0%
! TTATTAATACTTCCTTTGTC+AGG - chr4_2:53285534-53285553 None:intergenic 25.0%
!!! TGACAAAGGAAGTATTAATA+AGG + chr4_2:53285533-53285552 Msa0606680:intron 25.0%
!! ATTAATAAGGCTCAATTTTC+AGG + chr4_2:53285546-53285565 Msa0606680:intron 25.0%
! ATTTATGTTGAGCAACATTA+AGG - chr4_2:53285602-53285621 None:intergenic 25.0%
! TCATTATCATCTGAATCATA+GGG - chr4_2:53285687-53285706 None:intergenic 25.0%
! CAGAATAATGATGAAATCAA+AGG + chr4_2:53285720-53285739 Msa0606680:CDS 25.0%
! AGAAATGCTAGAATAATATG+CGG + chr4_2:53285862-53285881 Msa0606680:intron 25.0%
!! CCCTACATTAGATATAATTT+TGG + chr4_2:53286068-53286087 Msa0606680:intron 25.0%
! GCCAAAATTATATCTAATGT+AGG - chr4_2:53286072-53286091 None:intergenic 25.0%
! GTGAGATGATAAAATATGTT+TGG - chr4_2:53286193-53286212 None:intergenic 25.0%
! TTAAGATCTATTGACATTTC+TGG - chr4_2:53286244-53286263 None:intergenic 25.0%
! AATGTCAATAGATCTTAAGA+TGG + chr4_2:53286246-53286265 Msa0606680:intron 25.0%
! TGTTTCAATCTATCAAAACT+AGG - chr4_2:53286405-53286424 None:intergenic 25.0%
! AAGGTAAATATAAGAAATGC+AGG - chr4_2:53286875-53286894 None:intergenic 25.0%
! TAATTTATGCTAGGAATTCA+TGG + chr4_2:53286987-53287006 Msa0606680:intron 25.0%
! AATTTATGCTAGGAATTCAT+GGG + chr4_2:53286988-53287007 Msa0606680:intron 25.0%
! AGACATCAAGATAAAAACAA+AGG + chr4_2:53287146-53287165 Msa0606680:intron 25.0%
! GACATCAAGATAAAAACAAA+GGG + chr4_2:53287147-53287166 Msa0606680:intron 25.0%
! ATCAAAATGAAAACAGCTTA+TGG + chr4_2:53287333-53287352 Msa0606680:intron 25.0%
! AGAACAGAAGAAAAAACAAA+AGG + chr4_2:53287388-53287407 Msa0606680:intron 25.0%
! TGTTTGTCAATTTGTGAAAT+GGG - chr4_2:53287420-53287439 None:intergenic 25.0%
! TTGTTTGTCAATTTGTGAAA+TGG - chr4_2:53287421-53287440 None:intergenic 25.0%
! CTTTGTATAAAGTAGTATCT+CGG + chr4_2:53287442-53287461 Msa0606680:intron 25.0%
! ACATAATCATTAGAAGCTTA+TGG + chr4_2:53287499-53287518 Msa0606680:intron 25.0%
! ATATATTCTTCTTCAGTCAA+GGG - chr4_2:53287594-53287613 None:intergenic 25.0%
! AATATATTCTTCTTCAGTCA+AGG - chr4_2:53287595-53287614 None:intergenic 25.0%
!! CTGAAGAAGAATATATTTTG+AGG + chr4_2:53287598-53287617 Msa0606680:CDS 25.0%
! CCAAATAACAAGAAGTTATA+AGG - chr4_2:53287864-53287883 None:intergenic 25.0%
!!! CCTTATAACTTCTTGTTATT+TGG + chr4_2:53287861-53287880 Msa0606680:intron 25.0%
!! TGTGAGCATTTTTATAGATA+TGG + chr4_2:53287891-53287910 Msa0606680:CDS 25.0%
! AAAATCCTTCAATAAATCGT+CGG - chr4_2:53288231-53288250 None:intergenic 25.0%
!!! CTTTAGTTTGAATTATCATC+CGG + chr4_2:53288681-53288700 Msa0606680:intron 25.0%
!!! TTTAGTTTGAATTATCATCC+GGG + chr4_2:53288682-53288701 Msa0606680:intron 25.0%
! AAAGATCAACAATGAATTTC+TGG + chr4_2:53288852-53288871 Msa0606680:intron 25.0%
!!! ATTTGAAGAAAATGTTTTGG+TGG + chr4_2:53289097-53289116 Msa0606680:intron 25.0%
!! ATAAGTATTTTCTTAAGTGG+GGG + chr4_2:53290479-53290498 Msa0606680:intron 25.0%
! AGGTCAAAAATCATTAAAAG+TGG + chr4_2:53290597-53290616 Msa0606680:intron 25.0%
! TCATTAAAAGTGGAAGAATT+AGG + chr4_2:53290607-53290626 Msa0606680:intron 25.0%
! AACTAATTCATCAAAGATAC+GGG - chr4_2:53290912-53290931 None:intergenic 25.0%
! GAACTAATTCATCAAAGATA+CGG - chr4_2:53290913-53290932 None:intergenic 25.0%
! TAATGTTAGATATATGCTGT+TGG + chr4_2:53291426-53291445 Msa0606680:intron 25.0%
! ACATAAAATCTTGGCATATA+AGG - chr4_2:53291709-53291728 None:intergenic 25.0%
! AATTCAATAATCAAATGCAG+CGG - chr4_2:53291751-53291770 None:intergenic 25.0%
!!! AATTTTTAAGTTGGGAAAAC+GGG + chr4_2:53291887-53291906 Msa0606680:intron 25.0%
!!! AGTTTGTTTGGTTATGATTT+TGG + chr4_2:53292150-53292169 Msa0606680:intron 25.0%
!!! TTTTGGTGTGGTATATTTTA+TGG + chr4_2:53292167-53292186 Msa0606680:intron 25.0%
! TACAATATCCTTTATTGTAC+CGG + chr4_2:53292213-53292232 Msa0606680:intron 25.0%
!!! TAGAGTGGTTTTGTTTTTTT+TGG + chr4_2:53292320-53292339 Msa0606680:intron 25.0%
!! TGGAATTTTTGCAATAATTG+AGG + chr4_2:53292340-53292359 Msa0606680:intron 25.0%
!! GGAATTTTTGCAATAATTGA+GGG + chr4_2:53292341-53292360 Msa0606680:intron 25.0%
!! GAATTTTTGCAATAATTGAG+GGG + chr4_2:53292342-53292361 Msa0606680:intron 25.0%
! GGTAAAATGGGTAAAAAAAT+AGG + chr4_2:53292363-53292382 Msa0606680:intron 25.0%
!! TAAAGGCAATACTTTTCTTT+TGG - chr4_2:53292394-53292413 None:intergenic 25.0%
! AACAACTAGGTCATTAAAAT+GGG + chr4_2:53292463-53292482 Msa0606680:intron 25.0%
! CTTAAACCTTCGTTATTTAT+AGG - chr4_2:53292511-53292530 None:intergenic 25.0%
! CTATAAATAACGAAGGTTTA+AGG + chr4_2:53292509-53292528 Msa0606680:intron 25.0%
!! TTGTATGATGAGATGATTTT+TGG - chr4_2:53292698-53292717 None:intergenic 25.0%
! AAAATATAGTGATACTCGTA+AGG + chr4_2:53292886-53292905 Msa0606680:intron 25.0%
! ATAACACAAAAGATTTATCC+TGG - chr4_2:53292986-53293005 None:intergenic 25.0%
! TTGCAAAGTAGTATCATTAA+TGG + chr4_2:53293285-53293304 Msa0606680:intron 25.0%
!! TAAGTCAATTGTTTGCATTT+TGG + chr4_2:53293309-53293328 Msa0606680:intron 25.0%
!!! TTTGCATTTTGGTTAGTTTA+AGG + chr4_2:53293320-53293339 Msa0606680:intron 25.0%
TTGGCTTATGAATGAATTAG+AGG + chr4_2:53284610-53284629 Msa0606680:CDS 30.0%
!!! ATGGCCTTTTGTTTCTATAA+TGG + chr4_2:53284788-53284807 Msa0606680:intron 30.0%
CAGACCATTATAGAAACAAA+AGG - chr4_2:53284795-53284814 None:intergenic 30.0%
CGTTGAATGAAAAACAGAAA+TGG + chr4_2:53284857-53284876 Msa0606680:intron 30.0%
GTGGATAAAAAACAAATTGG+GGG - chr4_2:53285147-53285166 None:intergenic 30.0%
AGTTGTATGACATGGTAAAA+AGG - chr4_2:53285279-53285298 None:intergenic 30.0%
AAAAACCGGATAGAGAAAAT+CGG - chr4_2:53285393-53285412 None:intergenic 30.0%
GTGTTAGTAACGAAAAAAAC+CGG - chr4_2:53285407-53285426 None:intergenic 30.0%
!!! TTTTTTATGAAACTGAGTGC+AGG + chr4_2:53285447-53285466 Msa0606680:intron 30.0%
ATTAAGGAAGTCTAATCCTT+TGG - chr4_2:53285586-53285605 None:intergenic 30.0%
! AAAAATAGGCCTACATTTTC+TGG - chr4_2:53285637-53285656 None:intergenic 30.0%
GTCATTATCATCTGAATCAT+AGG - chr4_2:53285688-53285707 None:intergenic 30.0%
!! CACCACTTATAATCGTTTTT+CGG - chr4_2:53286094-53286113 None:intergenic 30.0%
! ATGTTGAAGCTCTTTTCAAA+TGG + chr4_2:53286552-53286571 Msa0606680:intron 30.0%
! CTCTTTTCAAATGGAAATAC+AGG + chr4_2:53286561-53286580 Msa0606680:intron 30.0%
AAAGAAAAAAGAAGAAACGC+CGG - chr4_2:53286644-53286663 None:intergenic 30.0%
ACTCTTATCAGGAACAAATA+TGG + chr4_2:53286766-53286785 Msa0606680:CDS 30.0%
CTCTTATCAGGAACAAATAT+GGG + chr4_2:53286767-53286786 Msa0606680:CDS 30.0%
AACTAACCTTCTTAATCAAC+TGG - chr4_2:53286807-53286826 None:intergenic 30.0%
CTGACTCTTAGTTAGAATAA+TGG + chr4_2:53287225-53287244 Msa0606680:intron 30.0%
AATTGGTCAAGAATGGTTAT+TGG - chr4_2:53287271-53287290 None:intergenic 30.0%
TGACAGAATTCCATTAGAAT+TGG - chr4_2:53287288-53287307 None:intergenic 30.0%
! CAGCTTATGGATTTTTAATC+TGG + chr4_2:53287346-53287365 Msa0606680:intron 30.0%
GAAGAAAAAACAAAAGGCAA+AGG + chr4_2:53287394-53287413 Msa0606680:intron 30.0%
TAATAGTACAACTAAGTGTC+TGG - chr4_2:53287476-53287495 None:intergenic 30.0%
TTATACAAGCATTTCCATAG+TGG - chr4_2:53287527-53287546 None:intergenic 30.0%
TATATTCTTCTTCAGTCAAG+GGG - chr4_2:53287593-53287612 None:intergenic 30.0%
TTGCAAACTCGTTAAAATGT+TGG + chr4_2:53287631-53287650 Msa0606680:CDS 30.0%
TGCAAACTCGTTAAAATGTT+GGG + chr4_2:53287632-53287651 Msa0606680:CDS 30.0%
ATTCTGCCAATATTGTATGA+AGG - chr4_2:53287770-53287789 None:intergenic 30.0%
! TTGTAAACTTTTGCTGATGT+TGG - chr4_2:53287795-53287814 None:intergenic 30.0%
! TTGAAGGAAGTAAGTTTTCT+TGG + chr4_2:53288085-53288104 Msa0606680:intron 30.0%
! TACAGAGATTAGAAGCTTTT+TGG + chr4_2:53288189-53288208 Msa0606680:intron 30.0%
! ACAGAGATTAGAAGCTTTTT+GGG + chr4_2:53288190-53288209 Msa0606680:intron 30.0%
TAAAGGTAAAACCTTTGTGT+GGG + chr4_2:53288285-53288304 Msa0606680:intron 30.0%
TCGTATTTGCACTTAAGATT+TGG + chr4_2:53288533-53288552 Msa0606680:intron 30.0%
ATTTGGAGACATTACTTGTA+TGG + chr4_2:53288550-53288569 Msa0606680:intron 30.0%
! GAAGTATTTGTTTGATCAGA+AGG + chr4_2:53288609-53288628 Msa0606680:intron 30.0%
TTCTTCATCTCATCATTATC+AGG - chr4_2:53289009-53289028 None:intergenic 30.0%
AGAAAAGATGAAAGAATCAC+AGG + chr4_2:53289803-53289822 Msa0606680:intron 30.0%
AGGACGTAAATATTCTAAGT+GGG + chr4_2:53290308-53290327 Msa0606680:intron 30.0%
! ATCGATTGTTGTAGGTTTTA+GGG + chr4_2:53290565-53290584 Msa0606680:intron 30.0%
! TGGAAGAATTAGGTGAATTT+TGG + chr4_2:53290617-53290636 Msa0606680:intron 30.0%
TTTGATGTAATGAACTGATG+TGG + chr4_2:53290987-53291006 Msa0606680:intron 30.0%
ACAACTTCATAGTTATTCGA+AGG - chr4_2:53291365-53291384 None:intergenic 30.0%
TTCGAATAACTATGAAGTTG+TGG + chr4_2:53291364-53291383 Msa0606680:intron 30.0%
TACTTAACCTCGTTAAATGA+TGG + chr4_2:53291389-53291408 Msa0606680:intron 30.0%
! CTATTTGAGATGTTAAGTTG+TGG + chr4_2:53291683-53291702 Msa0606680:intron 30.0%
ATCAGAGTTCATCAACATAA+CGG - chr4_2:53291856-53291875 None:intergenic 30.0%
!!! ATTTTTAAGTTGGGAAAACG+GGG + chr4_2:53291888-53291907 Msa0606680:intron 30.0%
! ATTTTGCACAGGTTTTTTGT+GGG + chr4_2:53291985-53292004 Msa0606680:intron 30.0%
!! ATTGAAGCATGTAGTTTGTT+TGG + chr4_2:53292138-53292157 Msa0606680:intron 30.0%
! CGGTTACATATTGTATTTTG+TGG + chr4_2:53292259-53292278 Msa0606680:intron 30.0%
TGGAACATTGTAACAAGTAA+AGG + chr4_2:53292279-53292298 Msa0606680:intron 30.0%
GGAACATTGTAACAAGTAAA+GGG + chr4_2:53292280-53292299 Msa0606680:intron 30.0%
ATATGAAAAAGCAGTTAGAG+TGG + chr4_2:53292305-53292324 Msa0606680:intron 30.0%
CAATAATTGAGGGGTAAAAT+GGG + chr4_2:53292351-53292370 Msa0606680:intron 30.0%
CAACAACTAGGTCATTAAAA+TGG + chr4_2:53292462-53292481 Msa0606680:intron 30.0%
ACATCTCCTATAAATAACGA+AGG + chr4_2:53292502-53292521 Msa0606680:intron 30.0%
GATCTAATGATACAATGAGA+GGG - chr4_2:53292617-53292636 None:intergenic 30.0%
TGATCTAATGATACAATGAG+AGG - chr4_2:53292618-53292637 None:intergenic 30.0%
AAAGACAACACAAGAAAAGT+TGG - chr4_2:53292775-53292794 None:intergenic 30.0%
!! CTGCTAATGTTGATAATACA+AGG + chr4_2:53292835-53292854 Msa0606680:intron 30.0%
! TGAAAATTTTACACGAAGTG+TGG + chr4_2:53292931-53292950 Msa0606680:intron 30.0%
! GAAAATTTTACACGAAGTGT+GGG + chr4_2:53292932-53292951 Msa0606680:intron 30.0%
! AAAATTTTACACGAAGTGTG+GGG + chr4_2:53292933-53292952 Msa0606680:intron 30.0%
CATAGTACTCTGAATTAACT+TGG - chr4_2:53293117-53293136 None:intergenic 30.0%
! CAAGTTAATTCAGAGTACTA+TGG + chr4_2:53293115-53293134 Msa0606680:intron 30.0%
!! TTTGGTTAGTTTAAGGTTAG+AGG + chr4_2:53293327-53293346 Msa0606680:intron 30.0%
GGAAGATTTCAATCAATTGA+TGG + chr4_2:53293384-53293403 Msa0606680:CDS 30.0%
ATTTCTAAGTTCACCACCTT+AGG + chr4_2:53284647-53284666 Msa0606680:CDS 35.0%
AATGGTCTGTTTATCCTATC+CGG + chr4_2:53284806-53284825 Msa0606680:intron 35.0%
! AATCATTGACTGAAATCGGA+TGG - chr4_2:53284922-53284941 None:intergenic 35.0%
TCATGGAGTCAGTATATTAG+AGG - chr4_2:53285006-53285025 None:intergenic 35.0%
!! TAAGTCAGAACTAATGGACT+TGG - chr4_2:53285039-53285058 None:intergenic 35.0%
!! AGTCCATTAGTTCTGACTTA+AGG + chr4_2:53285039-53285058 Msa0606680:intron 35.0%
AGTCCTTAAGTCAGAACTAA+TGG - chr4_2:53285045-53285064 None:intergenic 35.0%
TTAAATATTTGGATTCCGCG+CGG - chr4_2:53285091-53285110 None:intergenic 35.0%
AATTGGGGGTTTGAAAAGTA+GGG - chr4_2:53285133-53285152 None:intergenic 35.0%
AAATTGGGGGTTTGAAAAGT+AGG - chr4_2:53285134-53285153 None:intergenic 35.0%
CTCACTGTACTGGAAAAAAT+AGG - chr4_2:53285651-53285670 None:intergenic 35.0%
TACATGCAGTCATGCAAAAA+GGG - chr4_2:53285767-53285786 None:intergenic 35.0%
TTACATGCAGTCATGCAAAA+AGG - chr4_2:53285768-53285787 None:intergenic 35.0%
ATGCTAGAATAATATGCGGT+AGG + chr4_2:53285866-53285885 Msa0606680:intron 35.0%
! AATTGTTCATAGGAGTGTGT+CGG + chr4_2:53285972-53285991 Msa0606680:intron 35.0%
CGAAAAACGATTATAAGTGG+TGG + chr4_2:53286092-53286111 Msa0606680:intron 35.0%
AGATCTTAAGATGGTGAACT+AGG + chr4_2:53286255-53286274 Msa0606680:intron 35.0%
! GCTTCCGTAATCATATGTTT+TGG + chr4_2:53286516-53286535 Msa0606680:intron 35.0%
GAAAGTCTCGAGAAAATAGT+CGG + chr4_2:53286706-53286725 Msa0606680:CDS 35.0%
ACAGATGATTCAAGGTTTAG+TGG + chr4_2:53286730-53286749 Msa0606680:CDS 35.0%
TGATGTCCAGTTGATTAAGA+AGG + chr4_2:53286798-53286817 Msa0606680:CDS 35.0%
!! GAAGGTTAGTTTCTTACAAG+TGG + chr4_2:53286816-53286835 Msa0606680:intron 35.0%
GGTTATTGGATAAGTCAAAG+TGG - chr4_2:53287257-53287276 None:intergenic 35.0%
CCATTAGAATTGGTCAAGAA+TGG - chr4_2:53287278-53287297 None:intergenic 35.0%
CCATTCTTGACCAATTCTAA+TGG + chr4_2:53287275-53287294 Msa0606680:intron 35.0%
!! TACAACTAAGTGTCTGGTTT+TGG - chr4_2:53287470-53287489 None:intergenic 35.0%
GCAAACTCGTTAAAATGTTG+GGG + chr4_2:53287633-53287652 Msa0606680:CDS 35.0%
!! AACTTCTTGTTATTTGGTGC+AGG + chr4_2:53287867-53287886 Msa0606680:intron 35.0%
TTTATAGATATGGACGAGTC+CGG + chr4_2:53287901-53287920 Msa0606680:CDS 35.0%
! TGATCCATCTAAAGTTGAAG+CGG + chr4_2:53288138-53288157 Msa0606680:intron 35.0%
! CTAATCTCTGTAACTGACTT+CGG - chr4_2:53288181-53288200 None:intergenic 35.0%
!!! TAGAAGCTTTTTGGGTTTAG+CGG + chr4_2:53288198-53288217 Msa0606680:intron 35.0%
TACTACCGACGATTTATTGA+AGG + chr4_2:53288223-53288242 Msa0606680:intron 35.0%
GTAAAGGTAAAACCTTTGTG+TGG + chr4_2:53288284-53288303 Msa0606680:intron 35.0%
ACAAAAGGTTCATCAGGTTT+CGG - chr4_2:53288379-53288398 None:intergenic 35.0%
TACACTACAAAAGGTTCATC+AGG - chr4_2:53288385-53288404 None:intergenic 35.0%
GCATCACAATACACTACAAA+AGG - chr4_2:53288394-53288413 None:intergenic 35.0%
TGTACTTATGCAAGATGGTA+GGG + chr4_2:53288435-53288454 Msa0606680:intron 35.0%
CTAATTCAAGGTCATGAGTA+GGG - chr4_2:53288507-53288526 None:intergenic 35.0%
AATTGAATATGAGACAGCGA+AGG + chr4_2:53288632-53288651 Msa0606680:intron 35.0%
TAGGAAGACTTTACACTTGT+CGG + chr4_2:53288735-53288754 Msa0606680:intron 35.0%
! ATTTCTGGATAGTATCAGAG+AGG + chr4_2:53288867-53288886 Msa0606680:intron 35.0%
!! TGTGAAGTTGGTGGATTTAA+TGG + chr4_2:53288903-53288922 Msa0606680:intron 35.0%
AAGAAGATGATCCTTGAAGA+AGG + chr4_2:53289024-53289043 Msa0606680:intron 35.0%
GAATACTCAAACTGCTTCTA+TGG - chr4_2:53289050-53289069 None:intergenic 35.0%
!!! AAGAAAATGTTTTGGTGGTC+AGG + chr4_2:53289102-53289121 Msa0606680:intron 35.0%
ATACTATCCCATTTCCATTC+CGG - chr4_2:53289231-53289250 None:intergenic 35.0%
GAAATGGGATAGTATATCCA+TGG + chr4_2:53289236-53289255 Msa0606680:intron 35.0%
TCATTCCCTTTGTTGGTATT+CGG - chr4_2:53289279-53289298 None:intergenic 35.0%
AATTGCATCATTCCCTTTGT+TGG - chr4_2:53289286-53289305 None:intergenic 35.0%
ACAAAGGGAATGATGCAATT+TGG + chr4_2:53289286-53289305 Msa0606680:intron 35.0%
CAAAGGGAATGATGCAATTT+GGG + chr4_2:53289287-53289306 Msa0606680:intron 35.0%
AACATAAATCTCTGCTAGCT+GGG - chr4_2:53289376-53289395 None:intergenic 35.0%
TAACATAAATCTCTGCTAGC+TGG - chr4_2:53289377-53289396 None:intergenic 35.0%
TAACTTCAAATTAGTGCCCA+AGG - chr4_2:53289493-53289512 None:intergenic 35.0%
TTGTACGTGAATTCTATCAG+GGG - chr4_2:53289630-53289649 None:intergenic 35.0%
GTTGTACGTGAATTCTATCA+GGG - chr4_2:53289631-53289650 None:intergenic 35.0%
TGTTGTACGTGAATTCTATC+AGG - chr4_2:53289632-53289651 None:intergenic 35.0%
AAAGTTATCATGATAAGCGC+AGG + chr4_2:53289835-53289854 Msa0606680:intron 35.0%
AAGGATCTTGAGTTTCAAGA+AGG + chr4_2:53289858-53289877 Msa0606680:intron 35.0%
!! ACCCTTTCTGAAATCTGATA+CGG - chr4_2:53289969-53289988 None:intergenic 35.0%
TATCAGATTTCAGAAAGGGT+CGG + chr4_2:53289969-53289988 Msa0606680:intron 35.0%
TGTTTCATGTATCGCAACTT+CGG + chr4_2:53290045-53290064 Msa0606680:intron 35.0%
TACCTTGTTCAAACAACTCT+GGG - chr4_2:53290280-53290299 None:intergenic 35.0%
GAGGACGTAAATATTCTAAG+TGG + chr4_2:53290307-53290326 Msa0606680:intron 35.0%
GGACGTAAATATTCTAAGTG+GGG + chr4_2:53290309-53290328 Msa0606680:intron 35.0%
GACGTAAATATTCTAAGTGG+GGG + chr4_2:53290310-53290329 Msa0606680:intron 35.0%
TAGAAGTGATCGATTGTTGT+AGG + chr4_2:53290557-53290576 Msa0606680:intron 35.0%
! GATCGATTGTTGTAGGTTTT+AGG + chr4_2:53290564-53290583 Msa0606680:intron 35.0%
!!! TTGTTGTAGGTTTTAGGGAT+TGG + chr4_2:53290570-53290589 Msa0606680:intron 35.0%
!!! TGTTGTAGGTTTTAGGGATT+GGG + chr4_2:53290571-53290590 Msa0606680:intron 35.0%
TTACATCAAAACAGCATCAC+TGG - chr4_2:53290977-53290996 None:intergenic 35.0%
TAAGGTCATAAAAACCTGTC+AGG - chr4_2:53291100-53291119 None:intergenic 35.0%
! GTTTTTATGACCTTAGCGAT+GGG + chr4_2:53291105-53291124 Msa0606680:intron 35.0%
! TTTTTATGACCTTAGCGATG+GGG + chr4_2:53291106-53291125 Msa0606680:intron 35.0%
CATTTAGCCATCATTTAACG+AGG - chr4_2:53291399-53291418 None:intergenic 35.0%
GGAAAAATTGGGATCTATGA+GGG - chr4_2:53291936-53291955 None:intergenic 35.0%
AGGAAAAATTGGGATCTATG+AGG - chr4_2:53291937-53291956 None:intergenic 35.0%
! TCATAGATCCCAATTTTTCC+TGG + chr4_2:53291936-53291955 Msa0606680:intron 35.0%
! CATAGATCCCAATTTTTCCT+GGG + chr4_2:53291937-53291956 Msa0606680:intron 35.0%
! GATTTTGCACAGGTTTTTTG+TGG + chr4_2:53291984-53292003 Msa0606680:intron 35.0%
! TGTGGGTTTATGTGTTATTG+AGG + chr4_2:53292002-53292021 Msa0606680:intron 35.0%
TCAATTATTGATCCCTTTCC+TGG + chr4_2:53292027-53292046 Msa0606680:intron 35.0%
GGTATATGGGAAAAGATAGT+AGG - chr4_2:53292057-53292076 None:intergenic 35.0%
!! CATGTTTCTAGAATAGACCA+TGG - chr4_2:53292090-53292109 None:intergenic 35.0%
! CATGGTCTATTCTAGAAACA+TGG + chr4_2:53292088-53292107 Msa0606680:intron 35.0%
!! GTTTGGTTATGATTTTGGTG+TGG + chr4_2:53292155-53292174 Msa0606680:intron 35.0%
ATTCATCACCGGTACAATAA+AGG - chr4_2:53292224-53292243 None:intergenic 35.0%
ACTCATCTCATATTCATCAC+CGG - chr4_2:53292235-53292254 None:intergenic 35.0%
TGAATATGAGATGAGTAGTG+CGG + chr4_2:53292239-53292258 Msa0606680:intron 35.0%
GCAATAATTGAGGGGTAAAA+TGG + chr4_2:53292350-53292369 Msa0606680:intron 35.0%
!! TTAAAATGGGTTACTCTCCA+AGG + chr4_2:53292476-53292495 Msa0606680:intron 35.0%
TTTATAGGAGATGTAAGCCT+TGG - chr4_2:53292496-53292515 None:intergenic 35.0%
GACTTGGATTCATGTAGTCA+TGG - chr4_2:53285023-53285042 None:intergenic 40.0%
GAAATACAATCTTGCGTGTG+TGG - chr4_2:53285166-53285185 None:intergenic 40.0%
! CATGTCCGATTTTCTCTATC+CGG + chr4_2:53285385-53285404 Msa0606680:intron 40.0%
AGGAAGTCTAATCCTTTGGA+GGG - chr4_2:53285582-53285601 None:intergenic 40.0%
AAGGAAGTCTAATCCTTTGG+AGG - chr4_2:53285583-53285602 None:intergenic 40.0%
CATATTGTCACTCACTGTAC+TGG - chr4_2:53285661-53285680 None:intergenic 40.0%
CAGTACAGTGAGTGACAATA+TGG + chr4_2:53285659-53285678 Msa0606680:CDS 40.0%
GGCCGAAAAACGATTATAAG+TGG + chr4_2:53286089-53286108 Msa0606680:intron 40.0%
TACGTTCCAAGTCAGATTTG+AGG + chr4_2:53286127-53286146 Msa0606680:intron 40.0%
ACGTTCCAAGTCAGATTTGA+GGG + chr4_2:53286128-53286147 Msa0606680:intron 40.0%
AACTTCCCTCAAATCTGACT+TGG - chr4_2:53286136-53286155 None:intergenic 40.0%
TTCTTCCTCCAATGATGAAC+CGG + chr4_2:53286366-53286385 Msa0606680:intron 40.0%
ACTAGGATTTCACATCCAAC+CGG - chr4_2:53286388-53286407 None:intergenic 40.0%
ATGATCAGGTGAATAGTGAC+AGG + chr4_2:53286677-53286696 Msa0606680:CDS 40.0%
TAGTCGGTACAGATGATTCA+AGG + chr4_2:53286722-53286741 Msa0606680:CDS 40.0%
TTGACCTTGCTACTCTTATC+AGG + chr4_2:53286755-53286774 Msa0606680:CDS 40.0%
TGTTCCTGATAAGAGTAGCA+AGG - chr4_2:53286762-53286781 None:intergenic 40.0%
AGGGAGAGAAATTGAAGAGA+AGG - chr4_2:53286894-53286913 None:intergenic 40.0%
GCAGAACTTAACACATCGTT+TGG - chr4_2:53286951-53286970 None:intergenic 40.0%
! TCCTTGCTATGAATGTCATG+TGG + chr4_2:53287019-53287038 Msa0606680:CDS 40.0%
TCCACATGACATTCATAGCA+AGG - chr4_2:53287023-53287042 None:intergenic 40.0%
! GAATGTCATGTGGAAGTACA+TGG + chr4_2:53287029-53287048 Msa0606680:CDS 40.0%
TTGGATAAGTCAAAGTGGTG+AGG - chr4_2:53287252-53287271 None:intergenic 40.0%
AGAAGCTTATGGTACCACTA+TGG + chr4_2:53287510-53287529 Msa0606680:intron 40.0%
! AATTTTACCTTCCCTATCCG+AGG - chr4_2:53287705-53287724 None:intergenic 40.0%
GGGACACCTTCATACAATAT+TGG + chr4_2:53287761-53287780 Msa0606680:intron 40.0%
AATCGTCTAAGTGTGAGTTC+TGG + chr4_2:53288062-53288081 Msa0606680:intron 40.0%
! TAAGTGTGAGTTCTGGTTGA+AGG + chr4_2:53288069-53288088 Msa0606680:intron 40.0%
!! TTTCTTGGCCATGTTGTTTC+TGG + chr4_2:53288100-53288119 Msa0606680:intron 40.0%
TACCACTACCAGAAACAACA+TGG - chr4_2:53288111-53288130 None:intergenic 40.0%
GATACCGCTTCAACTTTAGA+TGG - chr4_2:53288145-53288164 None:intergenic 40.0%
AAGTTGAAGCGGTATCACAA+TGG + chr4_2:53288149-53288168 Msa0606680:intron 40.0%
AGTTGAAGCGGTATCACAAT+GGG + chr4_2:53288150-53288169 Msa0606680:intron 40.0%
!!! AGAAGCTTTTTGGGTTTAGC+GGG + chr4_2:53288199-53288218 Msa0606680:intron 40.0%
TTACACGTCAACTGCGTTAA+CGG - chr4_2:53288268-53288287 None:intergenic 40.0%
TTAACGCAGTTGACGTGTAA+AGG + chr4_2:53288268-53288287 Msa0606680:intron 40.0%
GCAATGAATATCCCACACAA+AGG - chr4_2:53288299-53288318 None:intergenic 40.0%
!! ATTGAAGAAGCGTTTGACGA+CGG + chr4_2:53288336-53288355 Msa0606680:intron 40.0%
GGTTTCGGCAAGATCAAAAT+CGG - chr4_2:53288364-53288383 None:intergenic 40.0%
TATTGTGATGCGTCCAAGTT+GGG + chr4_2:53288403-53288422 Msa0606680:intron 40.0%
GTGTACTTATGCAAGATGGT+AGG + chr4_2:53288434-53288453 Msa0606680:intron 40.0%
GCTAATTCAAGGTCATGAGT+AGG - chr4_2:53288508-53288527 None:intergenic 40.0%
ATACGACTGCAGCTAATTCA+AGG - chr4_2:53288519-53288538 None:intergenic 40.0%
CTTGTATGGTTCGAGATTTG+AGG + chr4_2:53288564-53288583 Msa0606680:intron 40.0%
!! GCAACAACATTAGCTTTACC+CGG - chr4_2:53288703-53288722 None:intergenic 40.0%
GTGTAAAGTCTTCCTACTCA+AGG - chr4_2:53288731-53288750 None:intergenic 40.0%
ACAGTTCAGAGACTTGAGTT+TGG + chr4_2:53288789-53288808 Msa0606680:intron 40.0%
GCAGAAAGTAGATGTGAAGT+TGG + chr4_2:53288891-53288910 Msa0606680:intron 40.0%
GAAAGTAGATGTGAAGTTGG+TGG + chr4_2:53288894-53288913 Msa0606680:intron 40.0%
TTAAAGTCACTGTCTACAGC+AGG - chr4_2:53288940-53288959 None:intergenic 40.0%
TGCTGTAGACAGTGACTTTA+AGG + chr4_2:53288939-53288958 Msa0606680:intron 40.0%
!! GACTTTAAGGTTGATGACCA+AGG + chr4_2:53288952-53288971 Msa0606680:intron 40.0%
AGCAGTTTGAGTATTCATCC+AGG + chr4_2:53289054-53289073 Msa0606680:intron 40.0%
!! TGATACATTTTAGCAGCTCC+TGG - chr4_2:53289075-53289094 None:intergenic 40.0%
TAGAGATTCCGGAATGGAAA+TGG + chr4_2:53289220-53289239 Msa0606680:intron 40.0%
AGAGATTCCGGAATGGAAAT+GGG + chr4_2:53289221-53289240 Msa0606680:intron 40.0%
AGTTTGCCGAATACCAACAA+AGG + chr4_2:53289270-53289289 Msa0606680:intron 40.0%
GTTTGCCGAATACCAACAAA+GGG + chr4_2:53289271-53289290 Msa0606680:intron 40.0%
CGTAGATAGATTGACGAAGT+CGG + chr4_2:53289314-53289333 Msa0606680:intron 40.0%
TATCCGACACAATGCTTGAT+GGG - chr4_2:53289425-53289444 None:intergenic 40.0%
AACAGTTACCACGCTAGTAT+TGG + chr4_2:53289651-53289670 Msa0606680:intron 40.0%
! TTACCACGCTAGTATTGGAA+TGG + chr4_2:53289656-53289675 Msa0606680:intron 40.0%
TTATCATGATAAGCGCAGGA+AGG + chr4_2:53289839-53289858 Msa0606680:intron 40.0%
GAGTGACTCTCAAAAACACA+TGG - chr4_2:53289887-53289906 None:intergenic 40.0%
!! TGTGTTTTTGAGAGTCACTC+CGG + chr4_2:53289887-53289906 Msa0606680:intron 40.0%
! AAGTTGACTCCGAGGTTTAT+TGG + chr4_2:53289942-53289961 Msa0606680:intron 40.0%
!! CCCTTTCTGAAATCTGATAC+GGG - chr4_2:53289968-53289987 None:intergenic 40.0%
CCCGTATCAGATTTCAGAAA+GGG + chr4_2:53289965-53289984 Msa0606680:intron 40.0%
TCATGCAAGTTCGAAAGATG+TGG - chr4_2:53290023-53290042 None:intergenic 40.0%
TCTCTATCCTCTATTCTCAC+CGG - chr4_2:53290149-53290168 None:intergenic 40.0%
TAGAGGATAGAGAAGTGAAG+AGG + chr4_2:53290156-53290175 Msa0606680:intron 40.0%
TACCTCTTGTGAAGGTTGTT+TGG + chr4_2:53290195-53290214 Msa0606680:intron 40.0%
ACCTCTTGTGAAGGTTGTTT+GGG + chr4_2:53290196-53290215 Msa0606680:intron 40.0%
!! TGAAAGTTTGACTTGGGAGT+TGG + chr4_2:53290232-53290251 Msa0606680:intron 40.0%
TACCCAGAGTTGTTTGAACA+AGG + chr4_2:53290275-53290294 Msa0606680:intron 40.0%
GTACCTTGTTCAAACAACTC+TGG - chr4_2:53290281-53290300 None:intergenic 40.0%
TTGAACAAGGTACGTTTACG+AGG + chr4_2:53290288-53290307 Msa0606680:intron 40.0%
!!! AGGTTTTAGGGATTGGGATT+AGG + chr4_2:53290577-53290596 Msa0606680:intron 40.0%
GAACACGTTTAGATGCTGAT+TGG + chr4_2:53290675-53290694 Msa0606680:intron 40.0%
!! CTGATTGGTGACGAATTAGA+GGG + chr4_2:53290690-53290709 Msa0606680:intron 40.0%
ACACAATTTCGCACAACATC+AGG - chr4_2:53290882-53290901 None:intergenic 40.0%
! GGTTTTTATGACCTTAGCGA+TGG + chr4_2:53291104-53291123 Msa0606680:intron 40.0%
! TTTTATGACCTTAGCGATGG+GGG + chr4_2:53291107-53291126 Msa0606680:intron 40.0%
TAAGGTCATATTTGGACCGT+CGG - chr4_2:53291141-53291160 None:intergenic 40.0%
TCCAAATATGACCTTAGCGA+TGG + chr4_2:53291145-53291164 Msa0606680:intron 40.0%
CCAAATATGACCTTAGCGAT+GGG + chr4_2:53291146-53291165 Msa0606680:intron 40.0%
CAAATATGACCTTAGCGATG+GGG + chr4_2:53291147-53291166 Msa0606680:intron 40.0%
AAATATGACCTTAGCGATGG+GGG + chr4_2:53291148-53291167 Msa0606680:intron 40.0%
AGACAACAACAACATGCATG+TGG - chr4_2:53291192-53291211 None:intergenic 40.0%
CAGCAACAACAGCATCAAAA+CGG - chr4_2:53291292-53291311 None:intergenic 40.0%
TATTACCTGCACATTACCCA+CGG - chr4_2:53291525-53291544 None:intergenic 40.0%
TAGGATGCTCTGATACGTAA+CGG + chr4_2:53291589-53291608 Msa0606680:intron 40.0%
CGCAACGTCACATAAAATCT+TGG - chr4_2:53291718-53291737 None:intergenic 40.0%
TAGGCAACCCAGGAAAAATT+GGG - chr4_2:53291947-53291966 None:intergenic 40.0%
TCAGAGAAGGAGAAGATAGT+AGG - chr4_2:53291966-53291985 None:intergenic 40.0%
AACCTGTGCAAAATCAGAGA+AGG - chr4_2:53291979-53291998 None:intergenic 40.0%
ATAGTAGGCAATCCAGGAAA+GGG - chr4_2:53292042-53292061 None:intergenic 40.0%
GAAAAGATAGTAGGCAATCC+AGG - chr4_2:53292048-53292067 None:intergenic 40.0%
! CTATCTTTTCCCATATACCC+AGG + chr4_2:53292058-53292077 Msa0606680:intron 40.0%
TGGATGAAACCTGGGTATAT+GGG - chr4_2:53292070-53292089 None:intergenic 40.0%
ATGGATGAAACCTGGGTATA+TGG - chr4_2:53292071-53292090 None:intergenic 40.0%
ATATACCCAGGTTTCATCCA+TGG + chr4_2:53292070-53292089 Msa0606680:intron 40.0%
ATAGACCATGGATGAAACCT+GGG - chr4_2:53292078-53292097 None:intergenic 40.0%
AATAGACCATGGATGAAACC+TGG - chr4_2:53292079-53292098 None:intergenic 40.0%
AACATGGAAGTTATTGCCGA+TGG + chr4_2:53292104-53292123 Msa0606680:intron 40.0%
ACATGCTTCAATGCACACAT+TGG - chr4_2:53292130-53292149 None:intergenic 40.0%
TAGTGATACTCGTAAGGTTC+TGG + chr4_2:53292892-53292911 Msa0606680:intron 40.0%
TTATCCTGGTTCACCAAAGT+CGG - chr4_2:53292972-53292991 None:intergenic 40.0%
!! GTTTTATGACCAGAGTGTTC+TGG - chr4_2:53293195-53293214 None:intergenic 40.0%
CATCCTAATCCATGCACCTA+AGG - chr4_2:53284666-53284685 None:intergenic 45.0%
!! CTTAGGTGCATGGATTAGGA+TGG + chr4_2:53284664-53284683 Msa0606680:CDS 45.0%
! GTGTGATTTTTCTAACCGCG+CGG + chr4_2:53285073-53285092 Msa0606680:intron 45.0%
!! TGGTTGGCCTCTAAGAATTC+AGG + chr4_2:53285503-53285522 Msa0606680:CDS 45.0%
GGGTGATCCTGAATTCTTAG+AGG - chr4_2:53285513-53285532 None:intergenic 45.0%
ATTCAGGATCACCCTGACAA+AGG + chr4_2:53285519-53285538 Msa0606680:CDS 45.0%
GGATATCATTCTCCCTCCAA+AGG + chr4_2:53285567-53285586 Msa0606680:intron 45.0%
GCCATACTGCCAGAAAATGT+AGG + chr4_2:53285625-53285644 Msa0606680:CDS 45.0%
!! GCCTACATTTTCTGGCAGTA+TGG - chr4_2:53285629-53285648 None:intergenic 45.0%
!! CTGACTTGGAACGTAAGATG+AGG - chr4_2:53286122-53286141 None:intergenic 45.0%
! ACATCCAACCGGTTCATCAT+TGG - chr4_2:53286377-53286396 None:intergenic 45.0%
! CGGATTGAGAGCACATCAAT+GGG - chr4_2:53286624-53286643 None:intergenic 45.0%
CCATTGATGTGCTCTCAATC+CGG + chr4_2:53286622-53286641 Msa0606680:intron 45.0%
! GGGGAGCTGTTTCACATATT+CGG + chr4_2:53287652-53287671 Msa0606680:CDS 45.0%
GTCGTTCTTTCGACTTTGCT+AGG - chr4_2:53287683-53287702 None:intergenic 45.0%
CAAAGTCGAAAGAACGACCT+CGG + chr4_2:53287685-53287704 Msa0606680:CDS 45.0%
!! TTGAAGAAGCGTTTGACGAC+GGG + chr4_2:53288337-53288356 Msa0606680:intron 45.0%
GTATTGTGATGCGTCCAAGT+TGG + chr4_2:53288402-53288421 Msa0606680:intron 45.0%
! GGAGGTGTACTTATGCAAGA+TGG + chr4_2:53288430-53288449 Msa0606680:intron 45.0%
ACTTATGCAAGATGGTAGGG+TGG + chr4_2:53288438-53288457 Msa0606680:intron 45.0%
CGTATGCATCAAGACAGTTG+AGG + chr4_2:53288464-53288483 Msa0606680:intron 45.0%
TGAATATGAGACAGCGAAGG+TGG + chr4_2:53288635-53288654 Msa0606680:intron 45.0%
TTGTTGCAGATGCCTTGAGT+AGG + chr4_2:53288716-53288735 Msa0606680:intron 45.0%
! TTTACACTTGTCGGCACTGA+TGG + chr4_2:53288744-53288763 Msa0606680:intron 45.0%
!! GGCACTGATGGTTAAAGAGA+TGG + chr4_2:53288756-53288775 Msa0606680:intron 45.0%
! TCGCCAAGGAGTGTGAAATT+GGG + chr4_2:53288823-53288842 Msa0606680:intron 45.0%
ATCCCCAATTTCACACTCCT+TGG - chr4_2:53288829-53288848 None:intergenic 45.0%
CTCGAAATCTCAACACTCCT+TGG - chr4_2:53288972-53288991 None:intergenic 45.0%
!! CAAGGAGTGTTGAGATTTCG+AGG + chr4_2:53288970-53288989 Msa0606680:intron 45.0%
TGCTTCTATGGCCTTCTTCA+AGG - chr4_2:53289038-53289057 None:intergenic 45.0%
TTGAGCATCAGAAACCTGCT+GGG + chr4_2:53289184-53289203 Msa0606680:intron 45.0%
ATTGACACCGCTAGAGATTC+CGG + chr4_2:53289209-53289228 Msa0606680:intron 45.0%
TTCCATTCCGGAATCTCTAG+CGG - chr4_2:53289219-53289238 None:intergenic 45.0%
CAAACTCGTCACGAAATCCA+TGG - chr4_2:53289256-53289275 None:intergenic 45.0%
AGAGATGTCGTGAAGTTGCA+TGG + chr4_2:53289396-53289415 Msa0606680:intron 45.0%
! TGTCCCATCAAGCATTGTGT+CGG + chr4_2:53289419-53289438 Msa0606680:intron 45.0%
CTATCCGACACAATGCTTGA+TGG - chr4_2:53289426-53289445 None:intergenic 45.0%
CAGAACCTCGATGTAAACCT+CGG - chr4_2:53289453-53289472 None:intergenic 45.0%
!! GTTCTGGAAGAGTTTGCATG+AGG + chr4_2:53289467-53289486 Msa0606680:intron 45.0%
AAGAGTTTGCATGAGGCCTT+GGG + chr4_2:53289474-53289493 Msa0606680:intron 45.0%
AGAGTTTGTGTGCTTGAGCA+AGG + chr4_2:53289582-53289601 Msa0606680:intron 45.0%
CGACCATACAATGCTTCGAA+GGG - chr4_2:53289684-53289703 None:intergenic 45.0%
!! CCTTCGAAGCATTGTATGGT+CGG + chr4_2:53289682-53289701 Msa0606680:intron 45.0%
CCGGATTCAAACCAACACAA+CGG - chr4_2:53289720-53289739 None:intergenic 45.0%
!! CCGTTGTGTTGGTTTGAATC+CGG + chr4_2:53289717-53289736 Msa0606680:intron 45.0%
GTAGTCTGTTGGACAATCTC+TGG - chr4_2:53289762-53289781 None:intergenic 45.0%
TGTCCAACAGACTACTGAGA+AGG + chr4_2:53289767-53289786 Msa0606680:intron 45.0%
TCACCTTCTCAGTAGTCTGT+TGG - chr4_2:53289773-53289792 None:intergenic 45.0%
! AGTCAAAGAAGTTGACTCCG+AGG + chr4_2:53289934-53289953 Msa0606680:intron 45.0%
TGATACGGGCCAATAAACCT+CGG - chr4_2:53289954-53289973 None:intergenic 45.0%
GCCCGTATCAGATTTCAGAA+AGG + chr4_2:53289964-53289983 Msa0606680:intron 45.0%
GATTTCAGAAAGGGTCGGAA+CGG + chr4_2:53289974-53289993 Msa0606680:intron 45.0%
TGCAAGTTCGAAAGATGTGG+TGG - chr4_2:53290020-53290039 None:intergenic 45.0%
TCTCTTGGAATCACATGGGA+TGG - chr4_2:53290086-53290105 None:intergenic 45.0%
ATCCTCTATTCTCACCGGTA+GGG - chr4_2:53290144-53290163 None:intergenic 45.0%
TATCCTCTATTCTCACCGGT+AGG - chr4_2:53290145-53290164 None:intergenic 45.0%
AGAGAAGTGAAGAGGCTTAG+AGG + chr4_2:53290164-53290183 Msa0606680:intron 45.0%
CAAGGAGATACCTCTTGTGA+AGG + chr4_2:53290187-53290206 Msa0606680:intron 45.0%
TCCCAAACAACCTTCACAAG+AGG - chr4_2:53290200-53290219 None:intergenic 45.0%
CTTGTGAAGGTTGTTTGGGA+AGG + chr4_2:53290200-53290219 Msa0606680:intron 45.0%
! AGCCGGTGAAAGTTTGACTT+GGG + chr4_2:53290226-53290245 Msa0606680:intron 45.0%
CTCCCAAGTCAAACTTTCAC+CGG - chr4_2:53290231-53290250 None:intergenic 45.0%
!! GCTGATTGGTGACGAATTAG+AGG + chr4_2:53290689-53290708 Msa0606680:intron 45.0%
!! TTGGTGACGAATTAGAGGGT+TGG + chr4_2:53290694-53290713 Msa0606680:intron 45.0%
! TGGTGACGAATTAGAGGGTT+GGG + chr4_2:53290695-53290714 Msa0606680:intron 45.0%
ATGACAGAACAGGGTTCTGT+CGG - chr4_2:53290758-53290777 None:intergenic 45.0%
TCATCAAAGATACGGGCGAA+AGG - chr4_2:53290905-53290924 None:intergenic 45.0%
! GAGTCGAGTTGTTGCATAGT+CGG + chr4_2:53291058-53291077 Msa0606680:intron 45.0%
AAGGTCATATTTGGACCGTC+GGG - chr4_2:53291140-53291159 None:intergenic 45.0%
CCCATCGCTAAGGTCATATT+TGG - chr4_2:53291149-53291168 None:intergenic 45.0%
AGGCAACATATACGCAGAAG+GGG - chr4_2:53291499-53291518 None:intergenic 45.0%
GAGGCAACATATACGCAGAA+GGG - chr4_2:53291500-53291519 None:intergenic 45.0%
AGGATGCTCTGATACGTAAC+GGG + chr4_2:53291590-53291609 Msa0606680:intron 45.0%
GTAGGCAACCCAGGAAAAAT+TGG - chr4_2:53291948-53291967 None:intergenic 45.0%
! CTCCTTCTCTGATTTTGCAC+AGG + chr4_2:53291974-53291993 Msa0606680:intron 45.0%
GATAGTAGGCAATCCAGGAA+AGG - chr4_2:53292043-53292062 None:intergenic 45.0%
TCAATGCACACATTGGCCAT+CGG - chr4_2:53292123-53292142 None:intergenic 45.0%
TTTACACGAAGTGTGGGGAT+TGG + chr4_2:53292938-53292957 Msa0606680:intron 45.0%
TATCCTGGTTCACCAAAGTC+GGG - chr4_2:53292971-53292990 None:intergenic 45.0%
TAACTGCTTCCAGAACACTC+TGG + chr4_2:53293183-53293202 Msa0606680:intron 45.0%
TTTGTTCGACAACGATTGCG+AGG + chr4_2:53293363-53293382 Msa0606680:CDS 45.0%
!! ATGATTAATATTAAATAAAA+TGG - chr4_2:53293162-53293181 None:intergenic 5.0%
AGTTCACCACCTTAGGTGCA+TGG + chr4_2:53284654-53284673 Msa0606680:CDS 50.0%
CCTAATCCATGCACCTAAGG+TGG - chr4_2:53284663-53284682 None:intergenic 50.0%
CCACCTTAGGTGCATGGATT+AGG + chr4_2:53284660-53284679 Msa0606680:CDS 50.0%
!! GGTGCATGGATTAGGATGGA+TGG + chr4_2:53284668-53284687 Msa0606680:CDS 50.0%
CTATCCGGATTCCTTGCAGT+CGG + chr4_2:53284821-53284840 Msa0606680:intron 50.0%
TATCCGGATTCCTTGCAGTC+GGG + chr4_2:53284822-53284841 Msa0606680:intron 50.0%
ATTATGTCCACCCACCAGTG+TGG + chr4_2:53285483-53285502 Msa0606680:CDS 50.0%
TTCTTAGAGGCCAACCACAC+TGG - chr4_2:53285500-53285519 None:intergenic 50.0%
TCCTCCAATGATGAACCGGT+TGG + chr4_2:53286370-53286389 Msa0606680:intron 50.0%
! TCCAACCGGTTCATCATTGG+AGG - chr4_2:53286374-53286393 None:intergenic 50.0%
! CCGGATTGAGAGCACATCAA+TGG - chr4_2:53286625-53286644 None:intergenic 50.0%
! CATGTGGAAGTACATGGAGC+AGG + chr4_2:53287035-53287054 Msa0606680:CDS 50.0%
TCGAAAGAACGACCTCGGAT+AGG + chr4_2:53287690-53287709 Msa0606680:CDS 50.0%
CGAAAGAACGACCTCGGATA+GGG + chr4_2:53287691-53287710 Msa0606680:CDS 50.0%
!! GGCCATGTTGTTTCTGGTAG+TGG + chr4_2:53288106-53288125 Msa0606680:intron 50.0%
! TGATGCGTCCAAGTTGGGTT+TGG + chr4_2:53288408-53288427 Msa0606680:intron 50.0%
! GATGCGTCCAAGTTGGGTTT+GGG + chr4_2:53288409-53288428 Msa0606680:intron 50.0%
TACACCTCCCAAACCCAACT+TGG - chr4_2:53288419-53288438 None:intergenic 50.0%
! GTCGCCAAGGAGTGTGAAAT+TGG + chr4_2:53288822-53288841 Msa0606680:intron 50.0%
! CGCCAAGGAGTGTGAAATTG+GGG + chr4_2:53288824-53288843 Msa0606680:intron 50.0%
GTCACTGTCTACAGCAGGAT+CGG - chr4_2:53288935-53288954 None:intergenic 50.0%
GTTGAGCATCAGAAACCTGC+TGG + chr4_2:53289183-53289202 Msa0606680:intron 50.0%
TTGTGTCGGATAGAGATCCG+AGG + chr4_2:53289433-53289452 Msa0606680:intron 50.0%
GAGATCCGAGGTTTACATCG+AGG + chr4_2:53289445-53289464 Msa0606680:intron 50.0%
CGAGGTTTACATCGAGGTTC+TGG + chr4_2:53289451-53289470 Msa0606680:intron 50.0%
GAAGAGTTTGCATGAGGCCT+TGG + chr4_2:53289473-53289492 Msa0606680:intron 50.0%
AGACGGATGGACAATCGGAA+AGG + chr4_2:53289532-53289551 Msa0606680:intron 50.0%
GGAAAGGACAATTCAGTCGC+TGG + chr4_2:53289548-53289567 Msa0606680:intron 50.0%
GTTTGTGTGCTTGAGCAAGG+TGG + chr4_2:53289585-53289604 Msa0606680:intron 50.0%
TGCTTGAGCAAGGTGGAACT+TGG + chr4_2:53289592-53289611 Msa0606680:intron 50.0%
GCTTGAGCAAGGTGGAACTT+GGG + chr4_2:53289593-53289612 Msa0606680:intron 50.0%
! GTGCCATTCCAATACTAGCG+TGG - chr4_2:53289662-53289681 None:intergenic 50.0%
!! GCACCCTTCGAAGCATTGTA+TGG + chr4_2:53289678-53289697 Msa0606680:intron 50.0%
CCGACCATACAATGCTTCGA+AGG - chr4_2:53289685-53289704 None:intergenic 50.0%
GATGCAGAACTCCGTTGTGT+TGG + chr4_2:53289706-53289725 Msa0606680:intron 50.0%
GTTTGAATCCGGTGAGAGTG+TGG + chr4_2:53289728-53289747 Msa0606680:intron 50.0%
! ATCCGGTGAGAGTGTGGTAT+TGG + chr4_2:53289734-53289753 Msa0606680:intron 50.0%
! TCCGGTGAGAGTGTGGTATT+GGG + chr4_2:53289735-53289754 Msa0606680:intron 50.0%
TCCCAATACCACACTCTCAC+CGG - chr4_2:53289739-53289758 None:intergenic 50.0%
TTTGAGAGTCACTCCGGTGA+CGG + chr4_2:53289893-53289912 Msa0606680:intron 50.0%
GGTCGGAACGGTTGCTTATA+GGG + chr4_2:53289986-53290005 Msa0606680:intron 50.0%
GGAACGGTTGCTTATAGGGT+GGG + chr4_2:53289990-53290009 Msa0606680:intron 50.0%
! GCAACTTCGGAAGTATGTGC+CGG + chr4_2:53290058-53290077 Msa0606680:intron 50.0%
GGAATCACATGGGATGGATC+CGG - chr4_2:53290080-53290099 None:intergenic 50.0%
CCTTACAATCGAGACCCTAC+CGG + chr4_2:53290127-53290146 Msa0606680:intron 50.0%
AGTGAAGAGGCTTAGAGGCA+AGG + chr4_2:53290169-53290188 Msa0606680:intron 50.0%
CAGCCGGTGAAAGTTTGACT+TGG + chr4_2:53290225-53290244 Msa0606680:intron 50.0%
GGGAGTTGGAGAGTAAGATG+CGG + chr4_2:53290246-53290265 Msa0606680:intron 50.0%
GGAGTTGGAGAGTAAGATGC+GGG + chr4_2:53290247-53290266 Msa0606680:intron 50.0%
GAGCAAAAAGGGTTACTCGC+AGG - chr4_2:53290811-53290830 None:intergenic 50.0%
AGTTGTTGCATAGTCGGCGA+TGG + chr4_2:53291064-53291083 Msa0606680:intron 50.0%
GTTGTTGCATAGTCGGCGAT+GGG + chr4_2:53291065-53291084 Msa0606680:intron 50.0%
TTGTTGCATAGTCGGCGATG+GGG + chr4_2:53291066-53291085 Msa0606680:intron 50.0%
ACATGCATGTGGTACCACCA+GGG - chr4_2:53291181-53291200 None:intergenic 50.0%
AACATGCATGTGGTACCACC+AGG - chr4_2:53291182-53291201 None:intergenic 50.0%
CGAGGCAACATATACGCAGA+AGG - chr4_2:53291501-53291520 None:intergenic 50.0%
GTATATGTTGCCTCGACCGT+GGG + chr4_2:53291506-53291525 Msa0606680:intron 50.0%
ATCCTAGACGACACGAAGTG+AGG - chr4_2:53291575-53291594 None:intergenic 50.0%
! TGCTCTGATACGTAACGGGA+TGG + chr4_2:53291594-53291613 Msa0606680:intron 50.0%
! GCTCTGATACGTAACGGGAT+GGG + chr4_2:53291595-53291614 Msa0606680:intron 50.0%
! CTCTGATACGTAACGGGATG+GGG + chr4_2:53291596-53291615 Msa0606680:intron 50.0%
! TCTGATACGTAACGGGATGG+GGG + chr4_2:53291597-53291616 Msa0606680:intron 50.0%
GAGAAGATAGTAGGCAACCC+AGG - chr4_2:53291957-53291976 None:intergenic 50.0%
ATTGGAAGTAGCCCCGACTT+TGG + chr4_2:53292956-53292975 Msa0606680:intron 50.0%
ATCCTGGTTCACCAAAGTCG+GGG - chr4_2:53292970-53292989 None:intergenic 50.0%
CGACTGCAAGGAATCCGGAT+AGG - chr4_2:53284823-53284842 None:intergenic 55.0%
ATCCGGATTCCTTGCAGTCG+GGG + chr4_2:53284823-53284842 Msa0606680:intron 55.0%
AACCCCGACTGCAAGGAATC+CGG - chr4_2:53284828-53284847 None:intergenic 55.0%
! TCCTTGCAGTCGGGGTTAGT+TGG + chr4_2:53284831-53284850 Msa0606680:intron 55.0%
TCCAACTAACCCCGACTGCA+AGG - chr4_2:53284835-53284854 None:intergenic 55.0%
TAGAGGCCAACCACACTGGT+GGG - chr4_2:53285496-53285515 None:intergenic 55.0%
TTAGAGGCCAACCACACTGG+TGG - chr4_2:53285497-53285516 None:intergenic 55.0%
! GTTCATAGGAGTGTGTCGGC+AGG + chr4_2:53285976-53285995 Msa0606680:intron 55.0%
AGAACGACCTCGGATAGGGA+AGG + chr4_2:53287695-53287714 Msa0606680:CDS 55.0%
! TGGTTTGCGAGATGTCGCCA+AGG + chr4_2:53288809-53288828 Msa0606680:intron 55.0%
! AGCGGTGTCAATAACCCAGC+AGG - chr4_2:53289201-53289220 None:intergenic 55.0%
CACCGCTAGAGATTCCGGAA+TGG + chr4_2:53289214-53289233 Msa0606680:intron 55.0%
ATCTCTGCTAGCTGGGACAC+AGG - chr4_2:53289369-53289388 None:intergenic 55.0%
TTCAGCATACCACCCGCAGA+CGG + chr4_2:53289515-53289534 Msa0606680:intron 55.0%
TCCGATTGTCCATCCGTCTG+CGG - chr4_2:53289531-53289550 None:intergenic 55.0%
TTGAGAGTCACTCCGGTGAC+GGG + chr4_2:53289894-53289913 Msa0606680:intron 55.0%
GGGTCGGAACGGTTGCTTAT+AGG + chr4_2:53289985-53290004 Msa0606680:intron 55.0%
CGGAACGGTTGCTTATAGGG+TGG + chr4_2:53289989-53290008 Msa0606680:intron 55.0%
CCGGTAGGGTCTCGATTGTA+AGG - chr4_2:53290130-53290149 None:intergenic 55.0%
GACCCTACCGGTGAGAATAG+AGG + chr4_2:53290139-53290158 Msa0606680:intron 55.0%
GTTGTTTGGGAAGGAGCAGC+CGG + chr4_2:53290209-53290228 Msa0606680:intron 55.0%
GTGCGAGCGATGACAGAACA+GGG - chr4_2:53290767-53290786 None:intergenic 55.0%
CTCGCAGTGGCGAGCAAAAA+GGG - chr4_2:53290822-53290841 None:intergenic 55.0%
TGTTGCATAGTCGGCGATGG+GGG + chr4_2:53291067-53291086 Msa0606680:intron 55.0%
ATGGGGGCTTAATGCCTGAC+AGG + chr4_2:53291083-53291102 Msa0606680:intron 55.0%
GCATTAAGCCCCCATCGCTA+AGG - chr4_2:53291118-53291137 None:intergenic 55.0%
GCATTAAGCCCCCATCGCTA+AGG - chr4_2:53291118-53291137 None:intergenic 55.0%
CGTATATGTTGCCTCGACCG+TGG + chr4_2:53291505-53291524 Msa0606680:intron 55.0%
CTCCTCACTTCGTGTCGTCT+AGG + chr4_2:53291570-53291589 Msa0606680:intron 55.0%
TGTCCACCCACCAGTGTGGT+TGG + chr4_2:53285487-53285506 Msa0606680:CDS 60.0%
! GCGTCCAAGTTGGGTTTGGG+AGG + chr4_2:53288412-53288431 Msa0606680:intron 60.0%
! GTCAGGTTTGAAGCGCGACG+TGG + chr4_2:53289119-53289138 Msa0606680:intron 60.0%
ATTGTCCATCCGTCTGCGGG+TGG - chr4_2:53289527-53289546 None:intergenic 60.0%
CCGATTGTCCATCCGTCTGC+GGG - chr4_2:53289530-53289549 None:intergenic 60.0%
CCCGCAGACGGATGGACAAT+CGG + chr4_2:53289527-53289546 Msa0606680:intron 60.0%
GGTGCGAGCGATGACAGAAC+AGG - chr4_2:53290768-53290787 None:intergenic 60.0%
GGTTACTCGCAGGTGCGAGT+AGG - chr4_2:53290801-53290820 None:intergenic 60.0%
GCTCGCAGTGGCGAGCAAAA+AGG - chr4_2:53290823-53290842 None:intergenic 60.0%
GCGTACAACGTTGCTCGCAG+TGG - chr4_2:53290835-53290854 None:intergenic 60.0%
GATGGGGGCTTAATGCCCGA+CGG + chr4_2:53291122-53291141 Msa0606680:intron 60.0%
ATGGGGGCTTAATGCCCTGG+TGG + chr4_2:53291164-53291183 Msa0606680:intron 60.0%
CTGCACATTACCCACGGTCG+AGG - chr4_2:53291519-53291538 None:intergenic 60.0%
CTCGACCGTGGGTAATGTGC+AGG + chr4_2:53291517-53291536 Msa0606680:intron 60.0%
AGCCCCGACTTTGGTGAACC+AGG + chr4_2:53292965-53292984 Msa0606680:intron 60.0%
AGGCCAACCACACTGGTGGG+TGG - chr4_2:53285493-53285512 None:intergenic 65.0%
CCACTCGTTCGCACGTGCAC+CGG - chr4_2:53287923-53287942 None:intergenic 65.0%
GCATACCACCCGCAGACGGA+TGG + chr4_2:53289519-53289538 Msa0606680:intron 65.0%
!! GTCACTCCGGTGACGGGTGT+TGG + chr4_2:53289900-53289919 Msa0606680:intron 65.0%
GCACGTCCAACACCCGTCAC+CGG - chr4_2:53289909-53289928 None:intergenic 65.0%
GTGCGAGTAGGAACGCTCGC+AGG - chr4_2:53290789-53290808 None:intergenic 65.0%
GCGATGGGGGCTTAATGCCC+TGG + chr4_2:53291120-53291139 Msa0606680:intron 65.0%
CCGGTGCACGTGCGAACGAG+TGG + chr4_2:53287920-53287939 Msa0606680:intron 70.0%
Chromosome Type Strat End Strand Name
chr4_2 gene 53284608 53293411 53284608 ID=Msa0606680;Name=Msa0606680
chr4_2 mRNA 53284608 53293411 53284608 ID=Msa0606680-mRNA-1;Parent=Msa0606680;Name=Msa0606680-mRNA-1;_AED=0.13;_eAED=0.13;_QI=0|0|0|0.75|0.57|0.75|8|0|263
chr4_2 exon 53284608 53284689 53284608 ID=Msa0606680-mRNA-1:exon:13120;Parent=Msa0606680-mRNA-1
chr4_2 exon 53285469 53285543 53285469 ID=Msa0606680-mRNA-1:exon:13121;Parent=Msa0606680-mRNA-1
chr4_2 exon 53285568 53285743 53285568 ID=Msa0606680-mRNA-1:exon:13122;Parent=Msa0606680-mRNA-1
chr4_2 exon 53286673 53286819 53286673 ID=Msa0606680-mRNA-1:exon:13123;Parent=Msa0606680-mRNA-1
chr4_2 exon 53287000 53287056 53287000 ID=Msa0606680-mRNA-1:exon:13124;Parent=Msa0606680-mRNA-1
chr4_2 exon 53287582 53287716 53287582 ID=Msa0606680-mRNA-1:exon:13125;Parent=Msa0606680-mRNA-1
chr4_2 exon 53287889 53287938 53287889 ID=Msa0606680-mRNA-1:exon:13126;Parent=Msa0606680-mRNA-1
chr4_2 exon 53293342 53293411 53293342 ID=Msa0606680-mRNA-1:exon:13127;Parent=Msa0606680-mRNA-1
chr4_2 CDS 53284608 53284689 53284608 ID=Msa0606680-mRNA-1:cds;Parent=Msa0606680-mRNA-1
chr4_2 CDS 53285469 53285543 53285469 ID=Msa0606680-mRNA-1:cds;Parent=Msa0606680-mRNA-1
chr4_2 CDS 53285568 53285743 53285568 ID=Msa0606680-mRNA-1:cds;Parent=Msa0606680-mRNA-1
chr4_2 CDS 53286673 53286819 53286673 ID=Msa0606680-mRNA-1:cds;Parent=Msa0606680-mRNA-1
chr4_2 CDS 53287000 53287056 53287000 ID=Msa0606680-mRNA-1:cds;Parent=Msa0606680-mRNA-1
chr4_2 CDS 53287582 53287716 53287582 ID=Msa0606680-mRNA-1:cds;Parent=Msa0606680-mRNA-1
chr4_2 CDS 53287889 53287938 53287889 ID=Msa0606680-mRNA-1:cds;Parent=Msa0606680-mRNA-1
chr4_2 CDS 53293342 53293411 53293342 ID=Msa0606680-mRNA-1:cds;Parent=Msa0606680-mRNA-1
Gene Sequence

>Msa0606680

TATTGGCTTATGAATGAATTAGAGGAAATAAAACAAATGATTTCTAAGTTCACCACCTTAGGTGCATGGATTAGGATGGATGGACACACAATGAACATTATGTCCACCCACCAGTGTGGTTGGCCTCTAAGAATTCAGGATCACCCTGACAAAGGAAGATATCATTCTCCCTCCAAAGGATTAGACTTCCTTAATGTTGCTCAACATAAATGTTGCCATACTGCCAGAAAATGTAGGCCTATTTTTTCCAGTACAGTGAGTGACAATATGGATCCCTATGATTCAGATGATAATGACAAGAACAAATCTCAGAATAATGATGAAATCAAAGGAAAAAATGATCAGGTGAATAGTGACAGGCTCAGAGAAAGTCTCGAGAAAATAGTCGGTACAGATGATTCAAGGTTTAGTGGATTTGACCTTGCTACTCTTATCAGGAACAAATATGGGAAATCTTATGATGTCCAGTTGATTAAGAAGGAATTCATGGGAAGAAATTTCCTTGCTATGAATGTCATGTGGAAGTACATGGAGCAGAGATCATTCCCCTTGACTGAAGAAGAATATATTTTGAGGCTCGATGATGTTGCAAACTCGTTAAAATGTTGGGGAGCTGTTTCACATATTCGGAACAGCCTAGCAAAGTCGAAAGAACGACCTCGGATAGGGAAGGCTGTGAGCATTTTTATAGATATGGACGAGTCCGGTGCACGTGCGAACGAGTTAGAGGATAGTTACTACAATTTGTTCGACAACGATTGCGAGGAAGATTTCAATCAATTGATGGAATAA

Protein sequence

>Msa0606680

YWLMNELEEIKQMISKFTTLGAWIRMDGHTMNIMSTHQCGWPLRIQDHPDKGRYHSPSKGLDFLNVAQHKCCHTARKCRPIFSSTVSDNMDPYDSDDNDKNKSQNNDEIKGKNDQVNSDRLRESLEKIVGTDDSRFSGFDLATLIRNKYGKSYDVQLIKKEFMGRNFLAMNVMWKYMEQRSFPLTEEEYILRLDDVANSLKCWGAVSHIRNSLAKSKERPRIGKAVSIFIDMDESGARANELEDSYYNLFDNDCEEDFNQLME*