AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar zhongmu-4 / Msa0716670

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0716670 MtrunA17_Chr5g0404381 98.718 312 4 0 1 312 1 312 0.0 643
Msa0716670 MtrunA17_Chr5g0396951 32.872 289 175 7 41 312 15 301 1.24e-42 149
Msa0716670 MtrunA17_Chr2g0298101 33.798 287 169 7 43 310 14 298 5.72e-41 145
Msa0716670 MtrunA17_Chr6g0449291 32.056 287 177 7 39 310 1 284 2.42e-36 132
Msa0716670 MtrunA17_Chr7g0275331 31.379 290 179 7 40 311 13 300 8.24e-36 131
Msa0716670 MtrunA17_Chr4g0049381 31.673 281 172 7 50 312 23 301 3.77e-34 127
Msa0716670 MtrunA17_Chr4g0000441 45.161 93 50 1 36 127 21 113 1.17e-19 84.0
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0716670 AT5G66530.1 78.623 276 59 0 37 312 32 307 3.93e-167 466
Msa0716670 AT5G66530.2 78.623 276 59 0 37 312 32 307 3.93e-167 466
Msa0716670 AT5G66530.3 78.623 276 59 0 37 312 32 307 3.93e-167 466
Msa0716670 AT5G66530.4 78.623 276 59 0 37 312 4 279 8.82e-167 464
Msa0716670 AT4G23730.1 34.286 280 163 8 52 312 26 303 8.35e-41 144
Msa0716670 AT5G57330.1 32.993 294 164 8 42 310 9 294 1.63e-40 144
Msa0716670 AT3G01590.1 33.449 287 165 8 45 312 8 287 7.92e-40 142
Msa0716670 AT3G01590.2 33.449 287 165 8 45 312 8 287 7.92e-40 142
Msa0716670 AT4G23730.3 33.916 286 162 9 52 312 26 309 4.98e-39 140
Msa0716670 AT5G14500.1 31.884 276 171 6 52 312 14 287 2.49e-38 138
Msa0716670 AT4G23730.2 34.701 268 154 8 64 312 3 268 2.98e-38 137
Msa0716670 AT4G25900.1 32.180 289 166 10 44 312 34 312 6.61e-38 137
Msa0716670 AT3G61610.2 31.769 277 169 7 52 310 19 293 6.55e-33 124
Msa0716670 AT3G61610.1 31.769 277 169 7 52 310 25 299 8.30e-33 124
Msa0716670 AT5G14500.2 29.236 301 171 7 52 312 14 312 1.19e-32 123

Find 233 sgRNAs with CRISPR-Local

Find 351 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
CTACCCTCAATTGGATTATT+AGG 0.159296 5_1:+10166129 None:intergenic
TCTCGCTTCCAAATGCTATT+TGG 0.165282 5_1:-10164978 Msa0716670:three_prime_UTR
TCTATTTCATGGTTTCTTAA+TGG 0.181570 5_1:+10162873 None:intergenic
AAAGTAAGTAAGAACCTTAT+TGG 0.201080 5_1:+10167589 None:intergenic
AAGCTACAATTTCCTGCTTT+TGG 0.212182 5_1:-10164941 Msa0716670:three_prime_UTR
GCATGGATTTGCAAGGAATT+TGG 0.218398 5_1:-10166792 Msa0716670:CDS
CTTCGTGTCTATGCAATTTC+AGG 0.219985 5_1:+10163348 Msa0716680:CDS
ACTCGTGGGCAACACCATTT+AGG 0.222811 5_1:-10164352 Msa0716670:three_prime_UTR
CTATTTCATGGTTTCTTAAT+GGG 0.229088 5_1:+10162874 None:intergenic
TTATTTATATTTATTATATA+TGG 0.233045 5_1:+10168088 None:intergenic
TGGAATTGCATTTGCGAGTT+TGG 0.237144 5_1:-10167806 Msa0716670:CDS
CAAATTATCAAAAGGGGTTT+TGG 0.241386 5_1:+10163297 Msa0716680:CDS
TAAAACCAAATGCTGCAATA+TGG 0.249420 5_1:+10164114 Msa0716680:CDS
CAGCTTTCATGCTTTATATA+AGG 0.258159 5_1:-10166675 Msa0716670:intron
GCATCAGTTAAGGGGTTAAA+AGG 0.284648 5_1:-10166180 Msa0716670:CDS
CGCCCTGCACACATACTTTC+GGG 0.284931 5_1:-10166470 Msa0716670:intron
CGGATGCATGACAGACCTTC+TGG 0.287736 5_1:+10164040 Msa0716680:CDS
GTTGTATTGTGATTGAAATT+TGG 0.306186 5_1:-10168027 Msa0716670:five_prime_UTR
GTTGCCCACGAGTTCTTTGC+TGG 0.310243 5_1:+10164362 Msa0716680:CDS
CTGAGGATAGTTCTATTTCA+TGG 0.311693 5_1:+10162862 None:intergenic
CATCCGTAATGTTCCATAAC+AGG 0.311851 5_1:-10164023 Msa0716670:three_prime_UTR
TGCAGTACTATCACCCTAAA+TGG 0.313791 5_1:+10164338 Msa0716680:CDS
GGTTCTACATTTGCTATGTT+TGG 0.315155 5_1:-10165021 Msa0716670:three_prime_UTR
TTGCAAGCAGATGATATGTT+AGG 0.317577 5_1:+10164435 None:intergenic
GATGAGAATGAAAATTTATC+TGG 0.317815 5_1:+10164469 None:intergenic
CAGTATTCGGTGAACTTATT+CGG 0.328384 5_1:-10163098 Msa0716670:three_prime_UTR
GGAATTGCATTTGCGAGTTT+GGG 0.335393 5_1:-10167805 Msa0716670:CDS
AAAAGAAGGTCTTTGCCATT+AGG 0.336299 5_1:+10167646 None:intergenic
GTTGAACTTAAGCAGATTCA+TGG 0.338711 5_1:+10162964 Msa0716680:CDS
ATAAGAGCACAACCCAAAAC+TGG 0.339762 5_1:-10163723 Msa0716670:three_prime_UTR
ATGCTGAAAGCGAGCAGCTT+AGG 0.341306 5_1:-10163626 Msa0716670:three_prime_UTR
CGATTTAATTATATCCAAAC+AGG 0.341451 5_1:-10164525 Msa0716670:three_prime_UTR
CCACATTGCTTTCCACAGTT+TGG 0.343104 5_1:-10167107 Msa0716670:CDS
CCTCGCGAGATATTGTTTCA+TGG 0.344010 5_1:+10163409 Msa0716680:CDS
GACTCGAACCCGCGGAAATT+CGG 0.344921 5_1:+10168140 None:intergenic
CTTGAGCTTGGCAAAGAGAT+TGG 0.350647 5_1:+10164173 Msa0716680:CDS
TTATAACATGAAACCTGTTA+TGG 0.354136 5_1:+10164010 Msa0716680:CDS
CTTTCTTCGCTACCCTCAAT+TGG 0.357618 5_1:+10166120 None:intergenic
TTGGTGGTTGCATTACTTCC+TGG 0.357635 5_1:-10167675 Msa0716670:CDS
TTCTATGTCCAAATAGCATT+TGG 0.360732 5_1:+10164970 None:intergenic
CCATGATGGTTGGCTTTGTT+AGG 0.361513 5_1:+10163529 Msa0716680:CDS
GATGAGTTGCAGCTTGATAA+TGG 0.362819 5_1:-10165549 Msa0716670:CDS
TATACATGGACTGCAATAAT+TGG 0.369544 5_1:+10163819 Msa0716680:CDS
AAGGGTCTGCTAAATCTTCC+AGG 0.371042 5_1:+10164314 Msa0716680:CDS
CAGTAATCATGCTCTCAAAC+AGG 0.371980 5_1:-10163986 Msa0716670:three_prime_UTR
CCGCCCTGCACACATACTTT+CGG 0.372782 5_1:-10166471 Msa0716670:CDS
TGCTTTCCACAGTTTGGTCC+TGG 0.376361 5_1:-10167101 Msa0716670:CDS
AAAACCAAATGCTGCAATAT+GGG 0.376873 5_1:+10164115 Msa0716680:CDS
TGTAAGTGGTGCATCAGTTA+AGG 0.379288 5_1:-10166190 Msa0716670:CDS
CTACAGCAAATGCTGGTTGC+CGG 0.386630 5_1:+10163582 Msa0716680:CDS
CACAGCTACTCCAACTCAAT+GGG 0.389408 5_1:+10162902 Msa0716680:CDS
TGACGGCCGGTATATTCATT+TGG 0.391589 5_1:+10164226 Msa0716680:CDS
GATCCCCATATTGCAGCATT+TGG 0.394144 5_1:-10164119 Msa0716670:three_prime_UTR
CTGTTTGGATATAATTAAAT+CGG 0.394862 5_1:+10164526 None:intergenic
TCCATACTCAAATTATCAAA+AGG 0.402075 5_1:+10163289 Msa0716680:CDS
TCAATTGGATTATTAGGATC+TGG 0.402876 5_1:+10166135 None:intergenic
ATATACCGGCCGTCATGATC+AGG 0.405563 5_1:-10164218 Msa0716670:three_prime_UTR
GTAAGTGGTGCATCAGTTAA+GGG 0.409071 5_1:-10166189 Msa0716670:CDS
AAGAGGATAACAATATTAAC+AGG 0.409459 5_1:-10168117 Msa0716670:five_prime_UTR
TAAACACAATCTACAAATCC+TGG 0.409510 5_1:+10165585 None:intergenic
TTTGCCATTAGGAACTTTCC+AGG 0.409997 5_1:+10167657 None:intergenic
TTAATAAGAAGAAACCAATA+AGG 0.410161 5_1:-10167603 Msa0716670:intron
GCAAGCATTCATGCTGCAGC+TGG 0.411902 5_1:+10164248 Msa0716680:CDS
ACATATGCATCAATGGAGTT+TGG 0.415076 5_1:+10163045 Msa0716680:CDS
AAGCTTCTCTTCCCTTTCCA+TGG 0.415547 5_1:-10163854 Msa0716670:three_prime_UTR
AGCTCGAGCCTGAACAAACT+TGG 0.418791 5_1:-10165085 Msa0716670:CDS
CACCACTAGCCAACTATTAG+TGG 0.418875 5_1:+10164819 None:intergenic
AGGGATGTGGTCACTTTCCC+AGG 0.421549 5_1:-10165603 Msa0716670:CDS
TAGACATGTCATACATTTCT+CGG 0.424455 5_1:-10164406 Msa0716670:three_prime_UTR
ACTTCCTGGAAAGTTCCTAA+TGG 0.431111 5_1:-10167661 Msa0716670:CDS
TTCATGCTGCAGCTGGAGAA+TGG 0.431186 5_1:+10164255 Msa0716680:CDS
CTCGTGGGCAACACCATTTA+GGG 0.435349 5_1:-10164351 Msa0716670:three_prime_UTR
GGAGAAGTGAGAACAAGTTT+AGG 0.437956 5_1:+10167727 None:intergenic
AGGCAAATTTCCTTCACCTT+CGG 0.440945 5_1:+10167747 None:intergenic
TTGCCCACGAGTTCTTTGCT+GGG 0.441349 5_1:+10164363 Msa0716680:CDS
ACAGCTGTCCAAGTTTGTTC+AGG 0.442315 5_1:+10165077 None:intergenic
TCATGTGGAACACCATGATC+AGG 0.445132 5_1:+10163121 Msa0716680:CDS
TTCAACCAAATGCAGAAAAC+AGG 0.448456 5_1:+10163885 Msa0716680:CDS
CTGACGGCATGTAGTCATAC+AGG 0.448529 5_1:+10163942 Msa0716680:CDS
AGGGAAGAGAAGCTTTAGAT+TGG 0.449987 5_1:+10163862 Msa0716680:CDS
TTCAGTTCCAGAGTTACAAC+AGG 0.450944 5_1:+10166731 None:intergenic
CTTAACTACATATGCATCAA+TGG 0.451147 5_1:+10163038 Msa0716680:CDS
CTTACTAGTGTTCAGTAAGT+TGG 0.451788 5_1:+10163782 Msa0716680:CDS
TTTACTAAGCCACTAATAGT+TGG 0.455991 5_1:-10164828 Msa0716670:three_prime_UTR
CCATACTCAAATTATCAAAA+GGG 0.456263 5_1:+10163290 Msa0716680:CDS
GAGGCTGAGATATATTTGTT+TGG 0.457612 5_1:-10167694 Msa0716670:CDS
AAATAATTGATAGGCCGGTT+CGG 0.458970 5_1:+10164894 None:intergenic
AAGATGTTTGTGCAGGTGGC+AGG 0.460192 5_1:-10164153 Msa0716670:three_prime_UTR
TGCTCGCTTTCAGCATGTGC+AGG 0.460208 5_1:+10163633 Msa0716680:CDS
CAAGAGATGACATTCTTCTC+TGG 0.462501 5_1:-10163501 Msa0716670:three_prime_UTR
GATTTGCAAGGAATTTGGAT+TGG 0.464230 5_1:-10166787 Msa0716670:CDS
ATGGTTGGCTTTGTTAGGAC+AGG 0.466812 5_1:+10163534 Msa0716680:CDS
CACTTTCACTGCAGTTCTGA+CGG 0.467510 5_1:+10163926 Msa0716680:CDS
TATTTCATGGTTTCTTAATG+GGG 0.470177 5_1:+10162875 None:intergenic
TCACAGCTACTCCAACTCAA+TGG 0.472371 5_1:+10162901 Msa0716680:CDS
TCATGGAATACAATGATTGA+TGG 0.472475 5_1:+10163426 Msa0716680:CDS
TGCTGAAAGCGAGCAGCTTA+GGG 0.473888 5_1:-10163625 Msa0716670:three_prime_UTR
GTGTTCCACATGACAGTATT+CGG 0.474379 5_1:-10163111 Msa0716670:three_prime_UTR
ATTGGTGGCTTTGCAATCCA+TGG 0.476981 5_1:+10163837 Msa0716680:CDS
CAACTTACTGAACACTAGTA+AGG 0.482883 5_1:-10163781 Msa0716670:three_prime_UTR
TACTGTCAACTTGTGTCTGA+TGG 0.483315 5_1:-10163007 Msa0716670:three_prime_UTR
GTGGAAACGTGGTTCCGAAC+CGG 0.485039 5_1:-10164908 Msa0716670:three_prime_UTR
AGGAATTTGGATTGGACTGT+TGG 0.486366 5_1:-10166779 Msa0716670:CDS
GCTGAGATATATTTGTTTGG+TGG 0.488082 5_1:-10167691 Msa0716670:CDS
AGAACCGTGGTCGATACAAC+AGG 0.489570 5_1:-10167942 Msa0716670:intron
AAACCTGTTATGGAACATTA+CGG 0.489880 5_1:+10164020 Msa0716680:CDS
AAGTTTGTTCAGGCTCGAGC+TGG 0.490832 5_1:+10165087 None:intergenic
TGCAAGCAGATGATATGTTA+GGG 0.491690 5_1:+10164436 None:intergenic
CTTGTTCTCACTTCTCCAGC+TGG 0.493059 5_1:-10167721 Msa0716670:CDS
CATGCTTCCATTTGAAGATG+AGG 0.495158 5_1:+10165382 None:intergenic
CTTTCAGCATGTGCAGGTCG+TGG 0.496958 5_1:+10163639 Msa0716680:CDS
GACACGAAGGAGGGAGTTTG+TGG 0.498349 5_1:-10163334 Msa0716670:three_prime_UTR
CAGAGAAGAATGTCATCTCT+TGG 0.498603 5_1:+10163502 Msa0716680:CDS
TCATGCTGCAGCTGGAGAAT+GGG 0.499640 5_1:+10164256 Msa0716680:CDS
GCGAGGGAAGCAAATCGAAT+AGG 0.499664 5_1:-10163392 Msa0716670:three_prime_UTR
ACAGACCTTCTGGGTCGCGC+AGG 0.502654 5_1:+10164050 Msa0716680:CDS
TAACTTAACCTATGCACGTA+TGG 0.504762 5_1:+10163068 Msa0716680:CDS
GTGTCTTCTACAGCAAATGC+TGG 0.505455 5_1:+10163575 Msa0716680:CDS
GGCTTTGCAATCCATGGAAA+GGG 0.509415 5_1:+10163843 Msa0716680:CDS
ATTTCTCGGACATGTGGGTG+GGG 0.509589 5_1:-10164392 Msa0716670:three_prime_UTR
TATAAACAGGCTTCTGTAAG+TGG 0.509718 5_1:-10166204 Msa0716670:intron
CATTTCTCGGACATGTGGGT+GGG 0.510807 5_1:-10164393 Msa0716670:three_prime_UTR
GTGGAATCCTCATCTTCAAA+TGG 0.511002 5_1:-10165389 Msa0716670:CDS
TACATATAGTCGTGCTATGT+GGG 0.511650 5_1:-10166702 Msa0716670:CDS
TGGTCCTGGTGCAATTCAGC+AGG 0.511929 5_1:-10167087 Msa0716670:intron
GGATGCATGACAGACCTTCT+GGG 0.512563 5_1:+10164041 Msa0716680:CDS
TTGCAGCTTGATAATGGCTT+GGG 0.512658 5_1:-10165543 Msa0716670:CDS
GGGAAATCCTGTTGTAACTC+TGG 0.512673 5_1:-10166738 Msa0716670:CDS
GATCCTAATAATCCAATTGA+GGG 0.513845 5_1:-10166132 Msa0716670:CDS
CATGGAATACAATGATTGAT+GGG 0.515558 5_1:+10163427 Msa0716680:CDS
ATCTCAGCCTCACTACCAGC+TGG 0.528382 5_1:+10167706 None:intergenic
AGATCCTAATAATCCAATTG+AGG 0.529404 5_1:-10166133 Msa0716670:CDS
AAATCGAATAGGACATGTGC+AGG 0.534475 5_1:-10163381 Msa0716670:three_prime_UTR
CAATTGAGGGTAGCGAAGAA+AGG 0.537959 5_1:-10166119 Msa0716670:intron
GAACATGCTTTGAGAAGGAA+AGG 0.539231 5_1:-10163234 Msa0716670:three_prime_UTR
TAATAGTTGGCTAGTGGTGA+GGG 0.539481 5_1:-10164815 Msa0716670:three_prime_UTR
TTACCCGAAAGTATGTGTGC+AGG 0.539592 5_1:+10166467 None:intergenic
GCAGTGAAAGTGAAGGAAGT+TGG 0.540369 5_1:-10163915 Msa0716670:three_prime_UTR
ATTATACAGAAGATACATGT+TGG 0.543953 5_1:+10164853 None:intergenic
CTGCACAAACATCTTGAGCT+TGG 0.546334 5_1:+10164161 Msa0716680:CDS
CACTTCTCCAGCTGGTAGTG+AGG 0.546966 5_1:-10167713 Msa0716670:CDS
CCTAACAAAGCCAACCATCA+TGG 0.548252 5_1:-10163529 Msa0716670:three_prime_UTR
ACATGGACTGCAATAATTGG+TGG 0.548301 5_1:+10163822 Msa0716680:CDS
TCATACATTTCTCGGACATG+TGG 0.549365 5_1:-10164398 Msa0716670:three_prime_UTR
CATACAGGGCTAGTTGAAGA+AGG 0.550840 5_1:+10163957 Msa0716680:CDS
GCTCAAGATGTTTGTGCAGG+TGG 0.554250 5_1:-10164157 Msa0716670:three_prime_UTR
GGGAATATCCGAATTTCCGC+GGG 0.554408 5_1:-10168148 Msa0716670:five_prime_UTR
TCTTGGACAACCATGATGGT+TGG 0.557098 5_1:+10163519 Msa0716680:CDS
TGGCTTTGCAATCCATGGAA+AGG 0.557135 5_1:+10163842 Msa0716680:CDS
GTTGCAGCTTGATAATGGCT+TGG 0.558868 5_1:-10165544 Msa0716670:CDS
CTAATAGTTGGCTAGTGGTG+AGG 0.561355 5_1:-10164816 Msa0716670:three_prime_UTR
GTTTGAATACGCCCTGATCA+TGG 0.562509 5_1:-10163133 Msa0716670:three_prime_UTR
CAGCCCCAGCAAAGAACTCG+TGG 0.563427 5_1:-10164367 Msa0716670:three_prime_UTR
CAGACCTTCTGGGTCGCGCA+GGG 0.563554 5_1:+10164051 Msa0716680:CDS
GGTGATTCTGAGAATGTTGA+GGG 0.564386 5_1:-10166758 Msa0716670:CDS
ACAATGTTACATATGTAATG+AGG 0.564932 5_1:+10164745 None:intergenic
AAAATTTATCTGGCGAGAGT+AGG 0.565092 5_1:+10164479 None:intergenic
ACATTTCTCGGACATGTGGG+TGG 0.565171 5_1:-10164394 Msa0716670:three_prime_UTR
ATCTTCGTAATGCAGGGATG+TGG 0.567372 5_1:-10165616 Msa0716670:intron
CAAGCTCAAGATGTTTGTGC+AGG 0.567522 5_1:-10164160 Msa0716670:three_prime_UTR
ATGTGCAGGTCGTGGTGCAT+TGG 0.569476 5_1:+10163647 Msa0716680:CDS
GGTCGTGGTGCATTGGAGCA+AGG 0.569689 5_1:+10163654 Msa0716680:CDS
AGAAGAAATGTGTCTATACA+TGG 0.570047 5_1:+10163805 Msa0716680:CDS
TTTAACAGCATGGATTTGCA+AGG 0.571252 5_1:-10166799 Msa0716670:intron
AAATGTAGCTTTGCATCGTG+TGG 0.573078 5_1:+10164566 None:intergenic
CCATGAAACAATATCTCGCG+AGG 0.573529 5_1:-10163409 Msa0716670:three_prime_UTR
TGCTTGCCAAATGAATATAC+CGG 0.574218 5_1:-10164232 Msa0716670:three_prime_UTR
CATACTCAAATTATCAAAAG+GGG 0.575942 5_1:+10163291 Msa0716680:CDS
GACACAAGTTGACAGTAAGC+AGG 0.577366 5_1:+10163013 Msa0716680:CDS
ACATCTCTCAAATAAATACA+TGG 0.581610 5_1:-10162932 Msa0716670:three_prime_UTR
AAACCAAATGCTGCAATATG+GGG 0.583156 5_1:+10164116 Msa0716680:CDS
ATACATATAGTCGTGCTATG+TGG 0.586796 5_1:-10166703 Msa0716670:CDS
AAACACAATCTACAAATCCT+GGG 0.586977 5_1:+10165586 None:intergenic
GCTGGTCAGATGCGGTGTTG+TGG 0.588359 5_1:-10165408 Msa0716670:CDS
TACCCGAAAGTATGTGTGCA+GGG 0.589772 5_1:+10166468 None:intergenic
TGTTTGTGTTGAAAATGCTA+AGG 0.590805 5_1:-10165347 Msa0716670:intron
CACGGTTACTGATCATGCAA+TGG 0.591147 5_1:+10165043 None:intergenic
AGGGTGATAGTACTGCATCC+TGG 0.591218 5_1:-10164332 Msa0716670:three_prime_UTR
ACCGCACGACAACCAAAAGC+AGG 0.594748 5_1:+10164929 None:intergenic
CATGTGGAACACCATGATCA+GGG 0.594774 5_1:+10163122 Msa0716680:CDS
GTGCAGAACATGCTTTGAGA+AGG 0.596206 5_1:-10163239 Msa0716670:three_prime_UTR
AGGGCTAGTTGAAGAAGGAA+AGG 0.598867 5_1:+10163962 Msa0716680:CDS
TGTTGTAACTCTGGAACTGA+AGG 0.600817 5_1:-10166729 Msa0716670:CDS
TGCCCACGAGTTCTTTGCTG+GGG 0.600883 5_1:+10164364 Msa0716680:CDS
TTCCGCGGGTTCGAGTCAAG+AGG 0.601857 5_1:-10168134 Msa0716670:five_prime_UTR
CAAACTGTGGAAAGCAATGT+GGG 0.602638 5_1:+10167108 None:intergenic
TGGTATGCACCCCATTGAGT+TGG 0.602869 5_1:-10162912 Msa0716670:three_prime_UTR
ATTGATGGGTATATAAAATG+TGG 0.604528 5_1:+10163441 Msa0716680:CDS
GTGCATTGGAGCAAGGCAAG+TGG 0.604821 5_1:+10163661 Msa0716680:CDS
GTATCGACCACGGTTCTGAA+AGG 0.608253 5_1:+10167948 None:intergenic
ACAACCCTGCGCGACCCAGA+AGG 0.610824 5_1:-10164055 Msa0716670:three_prime_UTR
CCCATGTAGCTGGTCAGATG+CGG 0.613904 5_1:-10165416 Msa0716670:intron
TGGACCCTGATCATGACGGC+CGG 0.615568 5_1:+10164213 Msa0716680:CDS
TATACCGGCCGTCATGATCA+GGG 0.615693 5_1:-10164217 Msa0716670:three_prime_UTR
CCAAACTGTGGAAAGCAATG+TGG 0.616463 5_1:+10167107 None:intergenic
CATCTCTTGGACAACCATGA+TGG 0.621464 5_1:+10163515 Msa0716680:CDS
CATACCTGCTGAATTGCACC+AGG 0.622503 5_1:+10167083 None:intergenic
TAAGAGCACAACCCAAAACT+GGG 0.623332 5_1:-10163722 Msa0716670:three_prime_UTR
AGTAATCATGCTCTCAAACA+GGG 0.623519 5_1:-10163985 Msa0716670:three_prime_UTR
CAGAACTGCAGTGAAAGTGA+AGG 0.624088 5_1:-10163922 Msa0716670:three_prime_UTR
GTAAAAGTTACCGAAGGTGA+AGG 0.624136 5_1:-10167757 Msa0716670:CDS
TGGTGATTCTGAGAATGTTG+AGG 0.627538 5_1:-10166759 Msa0716670:CDS
AACATGCTTTGAGAAGGAAA+GGG 0.632316 5_1:-10163233 Msa0716670:three_prime_UTR
TGGGAATATCCGAATTTCCG+CGG 0.632474 5_1:-10168149 Msa0716670:five_prime_UTR
GGGATTTGATAATTTGCGAG+AGG 0.639122 5_1:-10164795 Msa0716670:three_prime_UTR
CATACATTTCTCGGACATGT+GGG 0.639227 5_1:-10164397 Msa0716670:three_prime_UTR
AGGGTTGTTGAAAGAAGCAA+AGG 0.640818 5_1:+10164070 Msa0716680:CDS
ATCCTCTTGACTCGAACCCG+CGG 0.640920 5_1:+10168132 None:intergenic
TAAGTGGTGCATCAGTTAAG+GGG 0.648460 5_1:-10166188 Msa0716670:CDS
GTTGTCGTGCGGTGGAAACG+TGG 0.651404 5_1:-10164919 Msa0716670:three_prime_UTR
CTGAAATTGCATAGACACGA+AGG 0.652942 5_1:-10163347 Msa0716670:three_prime_UTR
AGCCACTAATAGTTGGCTAG+TGG 0.654669 5_1:-10164821 Msa0716670:three_prime_UTR
GTTCACCGAATACTGTCATG+TGG 0.655593 5_1:+10163106 Msa0716680:CDS
AAATTGCATAGACACGAAGG+AGG 0.657145 5_1:-10163344 Msa0716670:three_prime_UTR
TTGGGAGTAAAAGTTACCGA+AGG 0.657529 5_1:-10167763 Msa0716670:CDS
ACAGTTACCTTTCAGAACCG+TGG 0.663805 5_1:-10167955 Msa0716670:CDS
AGCCCCAGCAAAGAACTCGT+GGG 0.664328 5_1:-10164366 Msa0716670:three_prime_UTR
GGGAAAGTGTAAGCATTGTG+AGG 0.669895 5_1:-10163213 Msa0716670:three_prime_UTR
AAAATGTGGAAATGTAGACA+TGG 0.670127 5_1:+10163455 Msa0716680:CDS
TTAACCTGTTGTATCGACCA+CGG 0.670147 5_1:+10167938 None:intergenic
ATGGCTTCAATGGCATTCTG+TGG 0.671150 5_1:-10167985 Msa0716670:CDS
GATTTAATTATATCCAAACA+GGG 0.671483 5_1:-10164524 Msa0716670:three_prime_UTR
GAATTGGACCCTGATCATGA+CGG 0.672137 5_1:+10164209 Msa0716680:CDS
CATGAAACAATATCTCGCGA+GGG 0.672294 5_1:-10163408 Msa0716670:three_prime_UTR
TGACGGCATGTAGTCATACA+GGG 0.678991 5_1:+10163943 Msa0716680:CDS
TTAATTATATCCAAACAGGG+TGG 0.685106 5_1:-10164521 Msa0716670:three_prime_UTR
ATAGACATGTATGTCAAATG+CGG 0.685781 5_1:+10163744 Msa0716680:CDS
AATTGCATAGACACGAAGGA+GGG 0.692147 5_1:-10163343 Msa0716670:three_prime_UTR
ATTGCACCAGGACCAAACTG+TGG 0.695286 5_1:+10167095 None:intergenic
ACATAGCAAATGTAGAACCA+CGG 0.703222 5_1:+10165025 None:intergenic
CATTGCATGATCAGTAACCG+TGG 0.704081 5_1:-10165042 Msa0716670:exon
ACAGCTACTCCAACTCAATG+GGG 0.729999 5_1:+10162903 Msa0716680:CDS
CCGAAAGTATGTGTGCAGGG+CGG 0.758965 5_1:+10166471 None:intergenic

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! TTATTTATATTTATTATATA+TGG + chr5_1:10162928-10162947 Msa0716680:CDS 0.0%
!!! TCTTAAATTAAAATTTTACA+TGG - chr5_1:10164944-10164963 Msa0716670:three_prime_UTR 10.0%
!! AAATAAAGAAAAAACTACTT+TGG - chr5_1:10163231-10163250 Msa0716670:three_prime_UTR 15.0%
!! AATAAAGAAAAAACTACTTT+GGG - chr5_1:10163232-10163251 Msa0716670:three_prime_UTR 15.0%
!!! TATTACATTGTTATTTACAA+AGG - chr5_1:10163578-10163597 Msa0716670:three_prime_UTR 15.0%
!! AAGAAAATAACATTGAATAA+AGG + chr5_1:10163958-10163977 Msa0716680:CDS 15.0%
!! AATTTGAATAATCACTAAAT+AGG - chr5_1:10164568-10164587 Msa0716670:three_prime_UTR 15.0%
!! ATTTGAATAATCACTAAATA+GGG - chr5_1:10164569-10164588 Msa0716670:three_prime_UTR 15.0%
!! AGTTTACAAACTTTATAAAA+AGG - chr5_1:10165694-10165713 Msa0716670:intron 15.0%
!!! TATTTTGTTTTTACAAATGT+AGG - chr5_1:10167322-10167341 Msa0716670:intron 15.0%
!! GAAAAAACAAATACTATACT+TGG - chr5_1:10162959-10162978 Msa0716670:three_prime_UTR 20.0%
!! ATTTGGAAACAAAGAAAAAA+TGG - chr5_1:10163003-10163022 Msa0716670:three_prime_UTR 20.0%
!! ATTTGGAAGAGAAAAAAAAA+AGG + chr5_1:10163138-10163157 Msa0716680:CDS 20.0%
!! TGGTTTCTTCTTATTAAAAA+CGG + chr5_1:10163407-10163426 Msa0716680:CDS 20.0%
!! TTAATAAGAAGAAACCAATA+AGG - chr5_1:10163410-10163429 Msa0716670:three_prime_UTR 20.0%
!!! ACATTTTAAATATGAAGTGA+GGG - chr5_1:10163544-10163563 Msa0716670:three_prime_UTR 20.0%
!!! ACAAAAATTTGATGACTAAT+TGG - chr5_1:10164028-10164047 Msa0716670:three_prime_UTR 20.0%
!! AGTTAAAAATACTGACAATA+AGG - chr5_1:10164504-10164523 Msa0716670:three_prime_UTR 20.0%
!! TTGAATATTATTGTGACATT+TGG - chr5_1:10164606-10164625 Msa0716670:intron 20.0%
!!! ATCATTTTGTCATTATAAAC+AGG - chr5_1:10164796-10164815 Msa0716670:three_prime_UTR 20.0%
!!! TTAAAATTTTACATGGTAAG+TGG - chr5_1:10164951-10164970 Msa0716670:three_prime_UTR 20.0%
!!! GATAATTTGAAATACTTCAT+AGG + chr5_1:10165067-10165086 None:intergenic 20.0%
!! TTCAAATTCATACAAAATGA+TGG + chr5_1:10165170-10165189 None:intergenic 20.0%
!!! TTTATCATTCAATGCAATTT+TGG + chr5_1:10165332-10165351 None:intergenic 20.0%
!! CAAGACAAAAAATAATTGAT+AGG + chr5_1:10166131-10166150 None:intergenic 20.0%
!! CTGTTTGGATATAATTAAAT+CGG + chr5_1:10166490-10166509 None:intergenic 20.0%
!! GATTTAATTATATCCAAACA+GGG - chr5_1:10166489-10166508 Msa0716670:CDS 20.0%
! AAGAGGATAACAATATTAAC+AGG - chr5_1:10162896-10162915 Msa0716670:three_prime_UTR 25.0%
! GTTGTATTGTGATTGAAATT+TGG - chr5_1:10162986-10163005 Msa0716670:three_prime_UTR 25.0%
! TTACTACAAGCTAGAAAATT+TGG + chr5_1:10163155-10163174 Msa0716680:CDS 25.0%
! AAAGTAAGTAAGAACCTTAT+TGG + chr5_1:10163427-10163446 Msa0716680:CDS 25.0%
!! CACATTTTAAATATGAAGTG+AGG - chr5_1:10163543-10163562 Msa0716670:three_prime_UTR 25.0%
! GAAAATTAATCAGTATCCAA+GGG + chr5_1:10163865-10163884 Msa0716680:CDS 25.0%
! AGAAAATTAATCAGTATCCA+AGG + chr5_1:10163866-10163885 Msa0716680:CDS 25.0%
!!! GATACTGATTAATTTTCTTC+TGG - chr5_1:10163868-10163887 Msa0716670:three_prime_UTR 25.0%
!!! ATTCAATGTTATTTTCTTGC+AGG - chr5_1:10163960-10163979 Msa0716670:three_prime_UTR 25.0%
!!! ATTTGATGACTAATTGGTTT+TGG - chr5_1:10164034-10164053 Msa0716670:three_prime_UTR 25.0%
!!! GACTTGTTAAAATGTTTGTT+TGG - chr5_1:10164184-10164203 Msa0716670:three_prime_UTR 25.0%
! CATGAAATTACATCATGATT+TGG + chr5_1:10164431-10164450 None:intergenic 25.0%
! CAACTCATTCAAACAATAAT+TGG + chr5_1:10164705-10164724 None:intergenic 25.0%
! GTTGAAATTATTCAAATGCA+TGG - chr5_1:10164721-10164740 Msa0716670:three_prime_UTR 25.0%
! ATTAGAAATTAGCCACTAAA+TGG + chr5_1:10165215-10165234 None:intergenic 25.0%
!!! AATGCAATTTTGGTCTTATA+TGG + chr5_1:10165322-10165341 None:intergenic 25.0%
!!! CTATTTTTAATGCTTCAGAT+TGG - chr5_1:10165897-10165916 Msa0716670:intron 25.0%
! ACAAAAAATAATTGATAGGC+CGG + chr5_1:10166127-10166146 None:intergenic 25.0%
! ATTATACAGAAGATACATGT+TGG + chr5_1:10166163-10166182 None:intergenic 25.0%
! ACAATGTTACATATGTAATG+AGG + chr5_1:10166271-10166290 None:intergenic 25.0%
! CGATTTAATTATATCCAAAC+AGG - chr5_1:10166488-10166507 Msa0716670:CDS 25.0%
! GATGAGAATGAAAATTTATC+TGG + chr5_1:10166547-10166566 None:intergenic 25.0%
! AGAAGCCAGATAAAAAATAA+GGG + chr5_1:10166720-10166739 None:intergenic 25.0%
! TGGAAAAATTCTGATTGAAT+TGG + chr5_1:10166823-10166842 None:intergenic 25.0%
! TTATAACATGAAACCTGTTA+TGG + chr5_1:10167006-10167025 None:intergenic 25.0%
!! ATAAAAATAGACCCAGTTTT+GGG + chr5_1:10167305-10167324 None:intergenic 25.0%
!! AATAAAAATAGACCCAGTTT+TGG + chr5_1:10167306-10167325 None:intergenic 25.0%
!! ATTGATGGGTATATAAAATG+TGG + chr5_1:10167575-10167594 None:intergenic 25.0%
! CATACTCAAATTATCAAAAG+GGG + chr5_1:10167725-10167744 None:intergenic 25.0%
! CCATACTCAAATTATCAAAA+GGG + chr5_1:10167726-10167745 None:intergenic 25.0%
! TCCATACTCAAATTATCAAA+AGG + chr5_1:10167727-10167746 None:intergenic 25.0%
! ACATCTCTCAAATAAATACA+TGG - chr5_1:10168081-10168100 Msa0716670:five_prime_UTR 25.0%
! TATTTCATGGTTTCTTAATG+GGG + chr5_1:10168141-10168160 None:intergenic 25.0%
! CTATTTCATGGTTTCTTAAT+GGG + chr5_1:10168142-10168161 None:intergenic 25.0%
! TCTATTTCATGGTTTCTTAA+TGG + chr5_1:10168143-10168162 None:intergenic 25.0%
AAACAAAGAAAAAATGGCGA+TGG - chr5_1:10163009-10163028 Msa0716670:three_prime_UTR 30.0%
! GAAAGAAAACTATGGATTGA+TGG + chr5_1:10163108-10163127 Msa0716680:CDS 30.0%
!!! TTTTTATTTTTGCGATGCAG+TGG - chr5_1:10163187-10163206 Msa0716670:three_prime_UTR 30.0%
! TTTAAAATGTGTCTGACACA+TGG + chr5_1:10163534-10163553 Msa0716680:CDS 30.0%
TTAAGCTGTTTATCCAAACA+GGG + chr5_1:10163604-10163623 Msa0716680:CDS 30.0%
ATTAAGCTGTTTATCCAAAC+AGG + chr5_1:10163605-10163624 Msa0716680:CDS 30.0%
!!! GTTGTTTTAATAAGCTGTCT+TGG - chr5_1:10163699-10163718 Msa0716670:three_prime_UTR 30.0%
TAAACACTTGTGAGATTGTT+TGG + chr5_1:10163790-10163809 Msa0716680:CDS 30.0%
! GTTCATTTGAGTTTATCTAC+CGG + chr5_1:10163815-10163834 Msa0716680:CDS 30.0%
!!! TTAATTTTCTTCTGGAACAG+TGG - chr5_1:10163876-10163895 Msa0716670:three_prime_UTR 30.0%
CAGCTTTCATGCTTTATATA+AGG - chr5_1:10164338-10164357 Msa0716670:three_prime_UTR 30.0%
TGCTTTATATAAGGTTGTCA+AGG - chr5_1:10164347-10164366 Msa0716670:three_prime_UTR 30.0%
!! TTTCATGCTTTCATTTTTGC+AGG - chr5_1:10164444-10164463 Msa0716670:three_prime_UTR 30.0%
ACATTTGGTATTATGTTTGC+TGG - chr5_1:10164621-10164640 Msa0716670:intron 30.0%
AAAATCATCTGTACTTGGTT+AGG + chr5_1:10164679-10164698 None:intergenic 30.0%
TCAATTGGATTATTAGGATC+TGG + chr5_1:10164881-10164900 None:intergenic 30.0%
AGATCCTAATAATCCAATTG+AGG - chr5_1:10164880-10164899 Msa0716670:three_prime_UTR 30.0%
GATCCTAATAATCCAATTGA+GGG - chr5_1:10164881-10164900 Msa0716670:three_prime_UTR 30.0%
TCTGTAACATACTTTACTTC+TGG - chr5_1:10164917-10164936 Msa0716670:three_prime_UTR 30.0%
CTGTAACATACTTTACTTCT+GGG - chr5_1:10164918-10164937 Msa0716670:three_prime_UTR 30.0%
! CAAAATGATGGAGATAAAGA+AGG + chr5_1:10165158-10165177 None:intergenic 30.0%
GTATCATTTCATCCATTTAG+TGG - chr5_1:10165200-10165219 Msa0716670:intron 30.0%
AAACACAATCTACAAATCCT+GGG + chr5_1:10165430-10165449 None:intergenic 30.0%
TAAACACAATCTACAAATCC+TGG + chr5_1:10165431-10165450 None:intergenic 30.0%
TGTTTGTGTTGAAAATGCTA+AGG - chr5_1:10165666-10165685 Msa0716670:intron 30.0%
TTCTATGTCCAAATAGCATT+TGG + chr5_1:10166046-10166065 None:intergenic 30.0%
TTTACTAAGCCACTAATAGT+TGG - chr5_1:10166185-10166204 Msa0716670:CDS 30.0%
TTAATTATATCCAAACAGGG+TGG - chr5_1:10166492-10166511 Msa0716670:CDS 30.0%
TAGACATGTCATACATTTCT+CGG - chr5_1:10166607-10166626 Msa0716670:intron 30.0%
GAGAAGCCAGATAAAAAATA+AGG + chr5_1:10166721-10166740 None:intergenic 30.0%
AAAACCAAATGCTGCAATAT+GGG + chr5_1:10166901-10166920 None:intergenic 30.0%
TAAAACCAAATGCTGCAATA+TGG + chr5_1:10166902-10166921 None:intergenic 30.0%
!!! TATTGCAGCATTTGGTTTTA+TGG - chr5_1:10166902-10166921 Msa0716670:intron 30.0%
!!! ATTGCAGCATTTGGTTTTAT+GGG - chr5_1:10166903-10166922 Msa0716670:intron 30.0%
AAACCTGTTATGGAACATTA+CGG + chr5_1:10166996-10167015 None:intergenic 30.0%
! TAATTCCTGTTTTCTGCATT+TGG - chr5_1:10167123-10167142 Msa0716670:intron 30.0%
! TATACATGGACTGCAATAAT+TGG + chr5_1:10167197-10167216 None:intergenic 30.0%
AGAAGAAATGTGTCTATACA+TGG + chr5_1:10167211-10167230 None:intergenic 30.0%
ATAGACATGTATGTCAAATG+CGG + chr5_1:10167272-10167291 None:intergenic 30.0%
! TATTTTATCAGGTTTGATGC+CGG - chr5_1:10167412-10167431 Msa0716670:intron 30.0%
AAAATGTGGAAATGTAGACA+TGG + chr5_1:10167561-10167580 None:intergenic 30.0%
CATGGAATACAATGATTGAT+GGG + chr5_1:10167589-10167608 None:intergenic 30.0%
TCATGGAATACAATGATTGA+TGG + chr5_1:10167590-10167609 None:intergenic 30.0%
! CAAATTATCAAAAGGGGTTT+TGG + chr5_1:10167719-10167738 None:intergenic 30.0%
!! CCCTTTTGATAATTTGAGTA+TGG - chr5_1:10167723-10167742 Msa0716670:CDS 30.0%
!!! TACAAAACCAATGCTTTTTC+TGG - chr5_1:10167848-10167867 Msa0716670:intron 30.0%
!!! ACAAAACCAATGCTTTTTCT+GGG - chr5_1:10167849-10167868 Msa0716670:intron 30.0%
CTTAACTACATATGCATCAA+TGG + chr5_1:10167978-10167997 None:intergenic 30.0%
CATGGTCAATTGTTGAAAAA+AGG + chr5_1:10168034-10168053 None:intergenic 30.0%
GCTGAAGTGAAAGAAAACTA+TGG + chr5_1:10163116-10163135 Msa0716680:CDS 35.0%
GAGGCTGAGATATATTTGTT+TGG - chr5_1:10163319-10163338 Msa0716670:three_prime_UTR 35.0%
GCTGAGATATATTTGTTTGG+TGG - chr5_1:10163322-10163341 Msa0716670:three_prime_UTR 35.0%
AAAAGAAGGTCTTTGCCATT+AGG + chr5_1:10163370-10163389 Msa0716680:CDS 35.0%
TTCTTATTAAAAACGGCGTC+AGG + chr5_1:10163400-10163419 Msa0716680:CDS 35.0%
! ATCTGTGTCACTATTATGTC+TGG + chr5_1:10163492-10163511 Msa0716680:CDS 35.0%
TTATTTACAAAGGCCCTGTT+TGG - chr5_1:10163588-10163607 Msa0716670:three_prime_UTR 35.0%
AATCTCACAAGTGTTTATGC+CGG - chr5_1:10163793-10163812 Msa0716670:three_prime_UTR 35.0%
TCAAATGAACCAATCCAAAC+AGG - chr5_1:10163825-10163844 Msa0716670:three_prime_UTR 35.0%
AAATTAGGACCTGTTTGGAT+TGG + chr5_1:10163837-10163856 Msa0716680:CDS 35.0%
AATCCAAACAGGTCCTAATT+TGG - chr5_1:10163836-10163855 Msa0716670:three_prime_UTR 35.0%
ATCCAAACAGGTCCTAATTT+GGG - chr5_1:10163837-10163856 Msa0716670:three_prime_UTR 35.0%
TGGTTGAGTATTTAACAGCA+TGG - chr5_1:10164204-10164223 Msa0716670:three_prime_UTR 35.0%
TTTAACAGCATGGATTTGCA+AGG - chr5_1:10164214-10164233 Msa0716670:three_prime_UTR 35.0%
GATTTGCAAGGAATTTGGAT+TGG - chr5_1:10164226-10164245 Msa0716670:three_prime_UTR 35.0%
ATACATATAGTCGTGCTATG+TGG - chr5_1:10164310-10164329 Msa0716670:three_prime_UTR 35.0%
TACATATAGTCGTGCTATGT+GGG - chr5_1:10164311-10164330 Msa0716670:three_prime_UTR 35.0%
! ATGTTTGCTGGATATCTGAA+CGG - chr5_1:10164633-10164652 Msa0716670:intron 35.0%
GGATGAAAATCATCTGTACT+TGG + chr5_1:10164684-10164703 None:intergenic 35.0%
TATAAACAGGCTTCTGTAAG+TGG - chr5_1:10164809-10164828 Msa0716670:three_prime_UTR 35.0%
CTACCCTCAATTGGATTATT+AGG + chr5_1:10164887-10164906 None:intergenic 35.0%
TAAGTGGTAACTACTTGTAC+AGG - chr5_1:10164967-10164986 Msa0716670:three_prime_UTR 35.0%
! CAACTTTTTATCCAACCACT+TGG + chr5_1:10165039-10165058 None:intergenic 35.0%
GCACATGAAAATGCATGTAT+GGG + chr5_1:10165108-10165127 None:intergenic 35.0%
TGCACATGAAAATGCATGTA+TGG + chr5_1:10165109-10165128 None:intergenic 35.0%
! ATGATGGAGATAAAGAAGGT+AGG + chr5_1:10165154-10165173 None:intergenic 35.0%
AAAGTGTAAGCACTTGACTT+GGG + chr5_1:10165566-10165585 None:intergenic 35.0%
GGCGATTGAATTCAAATAAC+TGG - chr5_1:10165775-10165794 Msa0716670:intron 35.0%
TCATGCAGTGTTATGATATC+TGG - chr5_1:10165826-10165845 Msa0716670:intron 35.0%
ACATAGCAAATGTAGAACCA+CGG + chr5_1:10165991-10166010 None:intergenic 35.0%
!! GGTTCTACATTTGCTATGTT+TGG - chr5_1:10165992-10166011 Msa0716670:intron 35.0%
! AAGCTACAATTTCCTGCTTT+TGG - chr5_1:10166072-10166091 Msa0716670:intron 35.0%
AAATAATTGATAGGCCGGTT+CGG + chr5_1:10166122-10166141 None:intergenic 35.0%
AAAATTTATCTGGCGAGAGT+AGG + chr5_1:10166537-10166556 None:intergenic 35.0%
TGCAAGCAGATGATATGTTA+GGG + chr5_1:10166580-10166599 None:intergenic 35.0%
TTGCAAGCAGATGATATGTT+AGG + chr5_1:10166581-10166600 None:intergenic 35.0%
!!! GCAGACCCTTATTTTTTATC+TGG - chr5_1:10166712-10166731 Msa0716670:CDS 35.0%
TGCTTGCCAAATGAATATAC+CGG - chr5_1:10166781-10166800 Msa0716670:CDS 35.0%
AAACCAAATGCTGCAATATG+GGG + chr5_1:10166900-10166919 None:intergenic 35.0%
AGTAATCATGCTCTCAAACA+GGG - chr5_1:10167028-10167047 Msa0716670:intron 35.0%
TTCAACCAAATGCAGAAAAC+AGG + chr5_1:10167131-10167150 None:intergenic 35.0%
CTTACTAGTGTTCAGTAAGT+TGG + chr5_1:10167234-10167253 None:intergenic 35.0%
CAACTTACTGAACACTAGTA+AGG - chr5_1:10167232-10167251 Msa0716670:intron 35.0%
!! CAGCTTAGGGTTATTTTATC+AGG - chr5_1:10167401-10167420 Msa0716670:intron 35.0%
!! AACATGCTTTGAGAAGGAAA+GGG - chr5_1:10167780-10167799 Msa0716670:CDS 35.0%
! TAATGACCCAGAAAAAGCAT+TGG + chr5_1:10167858-10167877 None:intergenic 35.0%
! CAGTATTCGGTGAACTTATT+CGG - chr5_1:10167915-10167934 Msa0716670:intron 35.0%
TAACTTAACCTATGCACGTA+TGG + chr5_1:10167948-10167967 None:intergenic 35.0%
ACATATGCATCAATGGAGTT+TGG + chr5_1:10167971-10167990 None:intergenic 35.0%
GTTGAACTTAAGCAGATTCA+TGG + chr5_1:10168052-10168071 None:intergenic 35.0%
AAAAATGGCGATGGCTTCAA+TGG - chr5_1:10163018-10163037 Msa0716670:three_prime_UTR 40.0%
! TTAACCTGTTGTATCGACCA+CGG + chr5_1:10163078-10163097 Msa0716680:CDS 40.0%
TGGAATTGCATTTGCGAGTT+TGG - chr5_1:10163207-10163226 Msa0716670:three_prime_UTR 40.0%
GGAATTGCATTTGCGAGTTT+GGG - chr5_1:10163208-10163227 Msa0716670:three_prime_UTR 40.0%
TTGGGAGTAAAAGTTACCGA+AGG - chr5_1:10163250-10163269 Msa0716670:three_prime_UTR 40.0%
GTAAAAGTTACCGAAGGTGA+AGG - chr5_1:10163256-10163275 Msa0716670:three_prime_UTR 40.0%
AGGCAAATTTCCTTCACCTT+CGG + chr5_1:10163269-10163288 Msa0716680:CDS 40.0%
GGAGAAGTGAGAACAAGTTT+AGG + chr5_1:10163289-10163308 Msa0716680:CDS 40.0%
ACTTCCTGGAAAGTTCCTAA+TGG - chr5_1:10163352-10163371 Msa0716670:three_prime_UTR 40.0%
TTTGCCATTAGGAACTTTCC+AGG + chr5_1:10163359-10163378 Msa0716680:CDS 40.0%
ATCCCAAATTAGGACCTGTT+TGG + chr5_1:10163842-10163861 Msa0716680:CDS 40.0%
TATCCAAGGGATCCCAAATT+AGG + chr5_1:10163852-10163871 Msa0716680:CDS 40.0%
!!! ATTTTCTTCTGGAACAGTGG+AGG - chr5_1:10163879-10163898 Msa0716670:three_prime_UTR 40.0%
CAAACTGTGGAAAGCAATGT+GGG + chr5_1:10163908-10163927 Msa0716680:CDS 40.0%
GCATGGATTTGCAAGGAATT+TGG - chr5_1:10164221-10164240 Msa0716670:three_prime_UTR 40.0%
! AGGAATTTGGATTGGACTGT+TGG - chr5_1:10164234-10164253 Msa0716670:three_prime_UTR 40.0%
! TGGTGATTCTGAGAATGTTG+AGG - chr5_1:10164254-10164273 Msa0716670:three_prime_UTR 40.0%
! GGTGATTCTGAGAATGTTGA+GGG - chr5_1:10164255-10164274 Msa0716670:three_prime_UTR 40.0%
TTCAGTTCCAGAGTTACAAC+AGG + chr5_1:10164285-10164304 Msa0716680:CDS 40.0%
!! TGTTGTAACTCTGGAACTGA+AGG - chr5_1:10164284-10164303 Msa0716670:three_prime_UTR 40.0%
TGTAAGTGGTGCATCAGTTA+AGG - chr5_1:10164823-10164842 Msa0716670:three_prime_UTR 40.0%
GTAAGTGGTGCATCAGTTAA+GGG - chr5_1:10164824-10164843 Msa0716670:three_prime_UTR 40.0%
TAAGTGGTGCATCAGTTAAG+GGG - chr5_1:10164825-10164844 Msa0716670:three_prime_UTR 40.0%
GCATCAGTTAAGGGGTTAAA+AGG - chr5_1:10164833-10164852 Msa0716670:three_prime_UTR 40.0%
TTTATCCAACCACTTGGCTA+AGG + chr5_1:10165033-10165052 None:intergenic 40.0%
ATAGACCATCTTCGTAATGC+AGG - chr5_1:10165390-10165409 Msa0716670:CDS 40.0%
TAGACCATCTTCGTAATGCA+GGG - chr5_1:10165391-10165410 Msa0716670:CDS 40.0%
GATGAGTTGCAGCTTGATAA+TGG - chr5_1:10165464-10165483 Msa0716670:intron 40.0%
!! TTGCAGCTTGATAATGGCTT+GGG - chr5_1:10165470-10165489 Msa0716670:intron 40.0%
! GAAAGTGTAAGCACTTGACT+TGG + chr5_1:10165567-10165586 None:intergenic 40.0%
GTGGAATCCTCATCTTCAAA+TGG - chr5_1:10165624-10165643 Msa0716670:intron 40.0%
CATGCTTCCATTTGAAGATG+AGG + chr5_1:10165634-10165653 None:intergenic 40.0%
TGACTACATCGTCAACATGA+TGG - chr5_1:10165754-10165773 Msa0716670:intron 40.0%
TCTCGCTTCCAAATGCTATT+TGG - chr5_1:10166035-10166054 Msa0716670:intron 40.0%
TAATAGTTGGCTAGTGGTGA+GGG - chr5_1:10166198-10166217 Msa0716670:CDS 40.0%
! GGGATTTGATAATTTGCGAG+AGG - chr5_1:10166218-10166237 Msa0716670:intron 40.0%
! AAATGTAGCTTTGCATCGTG+TGG + chr5_1:10166450-10166469 None:intergenic 40.0%
! TAGTAGTTTTCCACCCTGTT+TGG + chr5_1:10166505-10166524 None:intergenic 40.0%
TCATACATTTCTCGGACATG+TGG - chr5_1:10166615-10166634 Msa0716670:intron 40.0%
CATACATTTCTCGGACATGT+GGG - chr5_1:10166616-10166635 Msa0716670:intron 40.0%
TGCAGTACTATCACCCTAAA+TGG + chr5_1:10166678-10166697 None:intergenic 40.0%
!!! AGCATTTGGTTTTATGGGCA+TGG - chr5_1:10166908-10166927 Msa0716670:intron 40.0%
AGGGTTGTTGAAAGAAGCAA+AGG + chr5_1:10166946-10166965 None:intergenic 40.0%
CATCCGTAATGTTCCATAAC+AGG - chr5_1:10166990-10167009 Msa0716670:intron 40.0%
CAGTAATCATGCTCTCAAAC+AGG - chr5_1:10167027-10167046 Msa0716670:intron 40.0%
!! AGGGAAGAGAAGCTTTAGAT+TGG + chr5_1:10167154-10167173 None:intergenic 40.0%
! ACATGGACTGCAATAATTGG+TGG + chr5_1:10167194-10167213 None:intergenic 40.0%
! ATAAGAGCACAACCCAAAAC+TGG - chr5_1:10167290-10167309 Msa0716670:intron 40.0%
! TAAGAGCACAACCCAAAACT+GGG - chr5_1:10167291-10167310 Msa0716670:intron 40.0%
CAGAGAAGAATGTCATCTCT+TGG + chr5_1:10167514-10167533 None:intergenic 40.0%
CAAGAGATGACATTCTTCTC+TGG - chr5_1:10167512-10167531 Msa0716670:intron 40.0%
CATGAAACAATATCTCGCGA+GGG - chr5_1:10167605-10167624 Msa0716670:CDS 40.0%
AAATCGAATAGGACATGTGC+AGG - chr5_1:10167632-10167651 Msa0716670:CDS 40.0%
CTTCGTGTCTATGCAATTTC+AGG + chr5_1:10167668-10167687 None:intergenic 40.0%
CTGAAATTGCATAGACACGA+AGG - chr5_1:10167666-10167685 Msa0716670:CDS 40.0%
AAATTGCATAGACACGAAGG+AGG - chr5_1:10167669-10167688 Msa0716670:CDS 40.0%
AATTGCATAGACACGAAGGA+GGG - chr5_1:10167670-10167689 Msa0716670:CDS 40.0%
!! GAACATGCTTTGAGAAGGAA+AGG - chr5_1:10167779-10167798 Msa0716670:CDS 40.0%
GTGTTCCACATGACAGTATT+CGG - chr5_1:10167902-10167921 Msa0716670:intron 40.0%
GTCAAAAACCATACGTGCAT+AGG - chr5_1:10167937-10167956 Msa0716670:intron 40.0%
TACTGTCAACTTGTGTCTGA+TGG - chr5_1:10168006-10168025 Msa0716670:exon 40.0%
ATGGCTTCAATGGCATTCTG+TGG - chr5_1:10163028-10163047 Msa0716670:three_prime_UTR 45.0%
ACAGTTACCTTTCAGAACCG+TGG - chr5_1:10163058-10163077 Msa0716670:three_prime_UTR 45.0%
! TTGGTGGTTGCATTACTTCC+TGG - chr5_1:10163338-10163357 Msa0716670:three_prime_UTR 45.0%
CGTCAGGACGAACAAAAAGA+AGG + chr5_1:10163384-10163403 Msa0716680:CDS 45.0%
CCAAACTGTGGAAAGCAATG+TGG + chr5_1:10163909-10163928 Msa0716680:CDS 45.0%
CCACATTGCTTTCCACAGTT+TGG - chr5_1:10163906-10163925 Msa0716670:three_prime_UTR 45.0%
GGGAAATCCTGTTGTAACTC+TGG - chr5_1:10164275-10164294 Msa0716670:three_prime_UTR 45.0%
! TACCCGAAAGTATGTGTGCA+GGG + chr5_1:10164548-10164567 None:intergenic 45.0%
! TTACCCGAAAGTATGTGTGC+AGG + chr5_1:10164549-10164568 None:intergenic 45.0%
CTTTCTTCGCTACCCTCAAT+TGG + chr5_1:10164896-10164915 None:intergenic 45.0%
CAATTGAGGGTAGCGAAGAA+AGG - chr5_1:10164894-10164913 Msa0716670:three_prime_UTR 45.0%
AACCACTTGGCTAAGGCTAA+GGG + chr5_1:10165026-10165045 None:intergenic 45.0%
ACATCCCTGCATTACGAAGA+TGG + chr5_1:10165398-10165417 None:intergenic 45.0%
ATCTTCGTAATGCAGGGATG+TGG - chr5_1:10165397-10165416 Msa0716670:CDS 45.0%
!! GTTGCAGCTTGATAATGGCT+TGG - chr5_1:10165469-10165488 Msa0716670:intron 45.0%
TTTCCTCTTACCCATGTAGC+TGG - chr5_1:10165587-10165606 Msa0716670:CDS 45.0%
! ACAGCTGTCCAAGTTTGTTC+AGG + chr5_1:10165939-10165958 None:intergenic 45.0%
CACGGTTACTGATCATGCAA+TGG + chr5_1:10165973-10165992 None:intergenic 45.0%
CATTGCATGATCAGTAACCG+TGG - chr5_1:10165971-10165990 Msa0716670:intron 45.0%
AGCCACTAATAGTTGGCTAG+TGG - chr5_1:10166192-10166211 Msa0716670:CDS 45.0%
CACCACTAGCCAACTATTAG+TGG + chr5_1:10166197-10166216 None:intergenic 45.0%
CTAATAGTTGGCTAGTGGTG+AGG - chr5_1:10166197-10166216 Msa0716670:CDS 45.0%
AAGGGTCTGCTAAATCTTCC+AGG + chr5_1:10166702-10166721 None:intergenic 45.0%
TGACGGCCGGTATATTCATT+TGG + chr5_1:10166790-10166809 None:intergenic 45.0%
GAATTGGACCCTGATCATGA+CGG + chr5_1:10166807-10166826 None:intergenic 45.0%
CTTGAGCTTGGCAAAGAGAT+TGG + chr5_1:10166843-10166862 None:intergenic 45.0%
CTGCACAAACATCTTGAGCT+TGG + chr5_1:10166855-10166874 None:intergenic 45.0%
CAAGCTCAAGATGTTTGTGC+AGG - chr5_1:10166853-10166872 Msa0716670:intron 45.0%
GATCCCCATATTGCAGCATT+TGG - chr5_1:10166894-10166913 Msa0716670:intron 45.0%
!! AGGGCTAGTTGAAGAAGGAA+AGG + chr5_1:10167054-10167073 None:intergenic 45.0%
!! CATACAGGGCTAGTTGAAGA+AGG + chr5_1:10167059-10167078 None:intergenic 45.0%
TGACGGCATGTAGTCATACA+GGG + chr5_1:10167073-10167092 None:intergenic 45.0%
! CACTTTCACTGCAGTTCTGA+CGG + chr5_1:10167090-10167109 None:intergenic 45.0%
CAGAACTGCAGTGAAAGTGA+AGG - chr5_1:10167091-10167110 Msa0716670:CDS 45.0%
GCAGTGAAAGTGAAGGAAGT+TGG - chr5_1:10167098-10167117 Msa0716670:CDS 45.0%
AAGCTTCTCTTCCCTTTCCA+TGG - chr5_1:10167159-10167178 Msa0716670:intron 45.0%
GGCTTTGCAATCCATGGAAA+GGG + chr5_1:10167173-10167192 None:intergenic 45.0%
! TGGCTTTGCAATCCATGGAA+AGG + chr5_1:10167174-10167193 None:intergenic 45.0%
! ATTGGTGGCTTTGCAATCCA+TGG + chr5_1:10167179-10167198 None:intergenic 45.0%
GTGTCTTCTACAGCAAATGC+TGG + chr5_1:10167441-10167460 None:intergenic 45.0%
!! ATGGTTGGCTTTGTTAGGAC+AGG + chr5_1:10167482-10167501 None:intergenic 45.0%
!! CCATGATGGTTGGCTTTGTT+AGG + chr5_1:10167487-10167506 None:intergenic 45.0%
CCTAACAAAGCCAACCATCA+TGG - chr5_1:10167484-10167503 Msa0716670:intron 45.0%
TCTTGGACAACCATGATGGT+TGG + chr5_1:10167497-10167516 None:intergenic 45.0%
CATCTCTTGGACAACCATGA+TGG + chr5_1:10167501-10167520 None:intergenic 45.0%
CCTCGCGAGATATTGTTTCA+TGG + chr5_1:10167607-10167626 None:intergenic 45.0%
CCATGAAACAATATCTCGCG+AGG - chr5_1:10167604-10167623 Msa0716670:CDS 45.0%
!!! CAAAAGGGGTTTTGGTTCAG+AGG + chr5_1:10167711-10167730 None:intergenic 45.0%
!! GTGCAGAACATGCTTTGAGA+AGG - chr5_1:10167774-10167793 Msa0716670:CDS 45.0%
! GGGAAAGTGTAAGCATTGTG+AGG - chr5_1:10167800-10167819 Msa0716670:CDS 45.0%
GTTTGAATACGCCCTGATCA+TGG - chr5_1:10167880-10167899 Msa0716670:intron 45.0%
CATGTGGAACACCATGATCA+GGG + chr5_1:10167894-10167913 None:intergenic 45.0%
TCATGTGGAACACCATGATC+AGG + chr5_1:10167895-10167914 None:intergenic 45.0%
GTTCACCGAATACTGTCATG+TGG + chr5_1:10167910-10167929 None:intergenic 45.0%
! GACACAAGTTGACAGTAAGC+AGG + chr5_1:10168003-10168022 None:intergenic 45.0%
ACAGCTACTCCAACTCAATG+GGG + chr5_1:10168113-10168132 None:intergenic 45.0%
CACAGCTACTCCAACTCAAT+GGG + chr5_1:10168114-10168133 None:intergenic 45.0%
TCACAGCTACTCCAACTCAA+TGG + chr5_1:10168115-10168134 None:intergenic 45.0%
!! GTATCGACCACGGTTCTGAA+AGG + chr5_1:10163068-10163087 Msa0716680:CDS 50.0%
AGAACCGTGGTCGATACAAC+AGG - chr5_1:10163071-10163090 Msa0716670:three_prime_UTR 50.0%
CTTGTTCTCACTTCTCCAGC+TGG - chr5_1:10163292-10163311 Msa0716670:three_prime_UTR 50.0%
! GGTCCTAATTTGGGATCCCT+TGG - chr5_1:10163846-10163865 Msa0716670:three_prime_UTR 50.0%
TGCTTTCCACAGTTTGGTCC+TGG - chr5_1:10163912-10163931 Msa0716670:three_prime_UTR 50.0%
ATTGCACCAGGACCAAACTG+TGG + chr5_1:10163921-10163940 Msa0716680:CDS 50.0%
CATACCTGCTGAATTGCACC+AGG + chr5_1:10163933-10163952 Msa0716680:CDS 50.0%
ACTTGGCTAAGGCTAAGGGA+AGG + chr5_1:10165022-10165041 None:intergenic 50.0%
!! TTCCCTTAGCCTTAGCCAAG+TGG - chr5_1:10165021-10165040 Msa0716670:three_prime_UTR 50.0%
CAACCACTTGGCTAAGGCTA+AGG + chr5_1:10165027-10165046 None:intergenic 50.0%
!! CTTAGCCTTAGCCAAGTGGT+TGG - chr5_1:10165025-10165044 Msa0716670:three_prime_UTR 50.0%
TGACCAGCTACATGGGTAAG+AGG + chr5_1:10165593-10165612 None:intergenic 50.0%
GAACAGTGCACAGTCTAGCA+GGG + chr5_1:10165733-10165752 None:intergenic 50.0%
AGAACAGTGCACAGTCTAGC+AGG + chr5_1:10165734-10165753 None:intergenic 50.0%
! AAGTTTGTTCAGGCTCGAGC+TGG + chr5_1:10165929-10165948 None:intergenic 50.0%
AGCTCGAGCCTGAACAAACT+TGG - chr5_1:10165928-10165947 Msa0716670:intron 50.0%
!! TCCTGCTTTTGGTTGTCGTG+CGG - chr5_1:10166083-10166102 Msa0716670:intron 50.0%
ACATTTCTCGGACATGTGGG+TGG - chr5_1:10166619-10166638 Msa0716670:intron 50.0%
CATTTCTCGGACATGTGGGT+GGG - chr5_1:10166620-10166639 Msa0716670:intron 50.0%
ATTTCTCGGACATGTGGGTG+GGG - chr5_1:10166621-10166640 Msa0716670:intron 50.0%
TTGCCCACGAGTTCTTTGCT+GGG + chr5_1:10166653-10166672 None:intergenic 50.0%
ACTCGTGGGCAACACCATTT+AGG - chr5_1:10166661-10166680 Msa0716670:intron 50.0%
CTCGTGGGCAACACCATTTA+GGG - chr5_1:10166662-10166681 Msa0716670:intron 50.0%
AGGGTGATAGTACTGCATCC+TGG - chr5_1:10166681-10166700 Msa0716670:CDS 50.0%
TCATGCTGCAGCTGGAGAAT+GGG + chr5_1:10166760-10166779 None:intergenic 50.0%
TTCATGCTGCAGCTGGAGAA+TGG + chr5_1:10166761-10166780 None:intergenic 50.0%
ATATACCGGCCGTCATGATC+AGG - chr5_1:10166795-10166814 Msa0716670:intron 50.0%
TATACCGGCCGTCATGATCA+GGG - chr5_1:10166796-10166815 Msa0716670:intron 50.0%
GCTCAAGATGTTTGTGCAGG+TGG - chr5_1:10166856-10166875 Msa0716670:intron 50.0%
AAGATGTTTGTGCAGGTGGC+AGG - chr5_1:10166860-10166879 Msa0716670:intron 50.0%
GGATGCATGACAGACCTTCT+GGG + chr5_1:10166975-10166994 None:intergenic 50.0%
CTGACGGCATGTAGTCATAC+AGG + chr5_1:10167074-10167093 None:intergenic 50.0%
ATGCTGAAAGCGAGCAGCTT+AGG - chr5_1:10167387-10167406 Msa0716670:intron 50.0%
TGCTGAAAGCGAGCAGCTTA+GGG - chr5_1:10167388-10167407 Msa0716670:intron 50.0%
! CTACAGCAAATGCTGGTTGC+CGG + chr5_1:10167434-10167453 None:intergenic 50.0%
GCGAGGGAAGCAAATCGAAT+AGG - chr5_1:10167621-10167640 Msa0716670:CDS 50.0%
TGGTATGCACCCCATTGAGT+TGG - chr5_1:10168101-10168120 Msa0716670:five_prime_UTR 50.0%
GACTCGAACCCGCGGAAATT+CGG + chr5_1:10162876-10162895 None:intergenic 55.0%
! ATCCTCTTGACTCGAACCCG+CGG + chr5_1:10162884-10162903 None:intergenic 55.0%
! CACTTCTCCAGCTGGTAGTG+AGG - chr5_1:10163300-10163319 Msa0716670:three_prime_UTR 55.0%
ATCTCAGCCTCACTACCAGC+TGG + chr5_1:10163310-10163329 Msa0716680:CDS 55.0%
TGGTCCTGGTGCAATTCAGC+AGG - chr5_1:10163926-10163945 Msa0716670:three_prime_UTR 55.0%
! CCGAAAGTATGTGTGCAGGG+CGG + chr5_1:10164545-10164564 None:intergenic 55.0%
CCGCCCTGCACACATACTTT+CGG - chr5_1:10164542-10164561 Msa0716670:three_prime_UTR 55.0%
CGCCCTGCACACATACTTTC+GGG - chr5_1:10164543-10164562 Msa0716670:three_prime_UTR 55.0%
! AGGGATGTGGTCACTTTCCC+AGG - chr5_1:10165410-10165429 Msa0716670:CDS 55.0%
CCGCATCTGACCAGCTACAT+GGG + chr5_1:10165600-10165619 None:intergenic 55.0%
CCCATGTAGCTGGTCAGATG+CGG - chr5_1:10165597-10165616 Msa0716670:CDS 55.0%
ACCGCATCTGACCAGCTACA+TGG + chr5_1:10165601-10165620 None:intergenic 55.0%
ACCGCACGACAACCAAAAGC+AGG + chr5_1:10166087-10166106 None:intergenic 55.0%
!! TGCTTTTGGTTGTCGTGCGG+TGG - chr5_1:10166086-10166105 Msa0716670:intron 55.0%
GTGGAAACGTGGTTCCGAAC+CGG - chr5_1:10166105-10166124 Msa0716670:intron 55.0%
AGCCCCAGCAAAGAACTCGT+GGG - chr5_1:10166647-10166666 Msa0716670:intron 55.0%
TGCCCACGAGTTCTTTGCTG+GGG + chr5_1:10166652-10166671 None:intergenic 55.0%
GTTGCCCACGAGTTCTTTGC+TGG + chr5_1:10166654-10166673 None:intergenic 55.0%
GCAAGCATTCATGCTGCAGC+TGG + chr5_1:10166768-10166787 None:intergenic 55.0%
CGGATGCATGACAGACCTTC+TGG + chr5_1:10166976-10166995 None:intergenic 55.0%
GTGCATTGGAGCAAGGCAAG+TGG + chr5_1:10167355-10167374 None:intergenic 55.0%
ATGTGCAGGTCGTGGTGCAT+TGG + chr5_1:10167369-10167388 None:intergenic 55.0%
CTTTCAGCATGTGCAGGTCG+TGG + chr5_1:10167377-10167396 None:intergenic 55.0%
TGCTCGCTTTCAGCATGTGC+AGG + chr5_1:10167383-10167402 None:intergenic 55.0%
GACACGAAGGAGGGAGTTTG+TGG - chr5_1:10167679-10167698 Msa0716670:CDS 55.0%
TTCCGCGGGTTCGAGTCAAG+AGG - chr5_1:10162879-10162898 Msa0716670:three_prime_UTR 60.0%
! GCTGGTCAGATGCGGTGTTG+TGG - chr5_1:10165605-10165624 Msa0716670:intron 60.0%
GTTGTCGTGCGGTGGAAACG+TGG - chr5_1:10166094-10166113 Msa0716670:intron 60.0%
CAGCCCCAGCAAAGAACTCG+TGG - chr5_1:10166646-10166665 Msa0716670:intron 60.0%
TGGACCCTGATCATGACGGC+CGG + chr5_1:10166803-10166822 None:intergenic 60.0%
GGTCGTGGTGCATTGGAGCA+AGG + chr5_1:10167362-10167381 None:intergenic 60.0%
ACAACCCTGCGCGACCCAGA+AGG - chr5_1:10166958-10166977 Msa0716670:intron 65.0%
CAGACCTTCTGGGTCGCGCA+GGG + chr5_1:10166965-10166984 None:intergenic 65.0%
ACAGACCTTCTGGGTCGCGC+AGG + chr5_1:10166966-10166985 None:intergenic 65.0%
Chromosome Type Strat End Strand Name
chr5_1 gene 10162866 10168169 10162866 ID=Msa0716670;Name=Msa0716670
chr5_1 mRNA 10162866 10168169 10162866 ID=Msa0716670-mRNA-1;Parent=Msa0716670;Name=Msa0716670-mRNA-1;_AED=0.04;_eAED=0.04;_QI=156|1|1|1|0.88|0.8|10|2089|312
chr5_1 exon 10162866 10164609 10162866 ID=Msa0716670-mRNA-1:exon:4081;Parent=Msa0716670-mRNA-1
chr5_1 exon 10164710 10165120 10164710 ID=Msa0716670-mRNA-1:exon:4080;Parent=Msa0716670-mRNA-1
chr5_1 exon 10165348 10165429 10165348 ID=Msa0716670-mRNA-1:exon:4079;Parent=Msa0716670-mRNA-1
chr5_1 exon 10165516 10165623 10165516 ID=Msa0716670-mRNA-1:exon:4078;Parent=Msa0716670-mRNA-1
chr5_1 exon 10166120 10166217 10166120 ID=Msa0716670-mRNA-1:exon:4077;Parent=Msa0716670-mRNA-1
chr5_1 exon 10166471 10166569 10166471 ID=Msa0716670-mRNA-1:exon:4076;Parent=Msa0716670-mRNA-1
chr5_1 exon 10166676 10166813 10166676 ID=Msa0716670-mRNA-1:exon:4075;Parent=Msa0716670-mRNA-1
chr5_1 exon 10167088 10167139 10167088 ID=Msa0716670-mRNA-1:exon:4074;Parent=Msa0716670-mRNA-1
chr5_1 exon 10167604 10167828 10167604 ID=Msa0716670-mRNA-1:exon:4073;Parent=Msa0716670-mRNA-1
chr5_1 exon 10167943 10168169 10167943 ID=Msa0716670-mRNA-1:exon:4072;Parent=Msa0716670-mRNA-1
chr5_1 five_prime_UTR 10168014 10168169 10168014 ID=Msa0716670-mRNA-1:five_prime_utr;Parent=Msa0716670-mRNA-1
chr5_1 CDS 10167943 10168013 10167943 ID=Msa0716670-mRNA-1:cds;Parent=Msa0716670-mRNA-1
chr5_1 CDS 10167604 10167828 10167604 ID=Msa0716670-mRNA-1:cds;Parent=Msa0716670-mRNA-1
chr5_1 CDS 10167088 10167139 10167088 ID=Msa0716670-mRNA-1:cds;Parent=Msa0716670-mRNA-1
chr5_1 CDS 10166676 10166813 10166676 ID=Msa0716670-mRNA-1:cds;Parent=Msa0716670-mRNA-1
chr5_1 CDS 10166471 10166569 10166471 ID=Msa0716670-mRNA-1:cds;Parent=Msa0716670-mRNA-1
chr5_1 CDS 10166120 10166217 10166120 ID=Msa0716670-mRNA-1:cds;Parent=Msa0716670-mRNA-1
chr5_1 CDS 10165516 10165623 10165516 ID=Msa0716670-mRNA-1:cds;Parent=Msa0716670-mRNA-1
chr5_1 CDS 10165348 10165429 10165348 ID=Msa0716670-mRNA-1:cds;Parent=Msa0716670-mRNA-1
chr5_1 CDS 10165055 10165120 10165055 ID=Msa0716670-mRNA-1:cds;Parent=Msa0716670-mRNA-1
chr5_1 three_prime_UTR 10164710 10165054 10164710 ID=Msa0716670-mRNA-1:three_prime_utr;Parent=Msa0716670-mRNA-1
chr5_1 three_prime_UTR 10162866 10164609 10162866 ID=Msa0716670-mRNA-1:three_prime_utr;Parent=Msa0716670-mRNA-1
Gene Sequence

>Msa0716670

ATGGCGATGGCTTCAATGGCATTCTGTGGTGTCAACACAGTTACCTTTCAGAACCGTGGTCGATACAACAGTGGAATTGCATTTGCGAGTTTGGGAAATAAAGAAAAAACTACTTTGGGAGTAAAAGTTACCGAAGGTGAAGGAAATTTGCCTAAACTTGTTCTCACTTCTCCAGCTGGTAGTGAGGCTGAGATATATTTGTTTGGTGGTTGCATTACTTCCTGGAAAGTTCCTAATGGCAAAGACCTTCTTTTTGTTCGTCCTGACGCCGTTTTTAATAAGAAGAAACCAATAAGTGGAGGTATCCCACATTGCTTTCCACAGTTTGGTCCTGGTGCAATTCAGCAGCATGGATTTGCAAGGAATTTGGATTGGACTGTTGGTGATTCTGAGAATGTTGAGGGAAATCCTGTTGTAACTCTGGAACTGAAGGATGATACATATAGTCGTGCTATGTGGGATTTCAGCTTTCATGCTTTATATAAGGTCACACTAAATGCTAAAAGTCTTTCGACTGAGTTAAAAGTTAAAAATACTGACAATAAGGCATTCTCATTCAATACCGCCCTGCACACATACTTTCGGGCTTCTGTAAGTGGTGCATCAGTTAAGGGGTTAAAAGGTTGCAAAACTCTGAACAAACATCCAGATCCTAATAATCCAATTGAGGGTAGCGAAGAAAGGGATGTGGTCACTTTCCCAGGATTTGTAGATTGTGTTTATCTTAACGCTTCAGATGAGTTGCAGCTTGATAATGGCTTGGGTGATATAATTTCTATCAAGAACACGAACTGGTCAGATGCGGTGTTGTGGAATCCTCATCTTCAAATGGAAGCATGTTACAAAGATTTTGTTTGTGTTGAAAATGCTAAGATTGGAAATGTCCAGCTCGAGCCTGAACAAACTTGGACAGCTGTGCAGCATCTTACCATTGCATGA
Protein sequence

>Msa0716670

MAMASMAFCGVNTVTFQNRGRYNSGIAFASLGNKEKTTLGVKVTEGEGNLPKLVLTSPAGSEAEIYLFGGCITSWKVPNGKDLLFVRPDAVFNKKKPISGGIPHCFPQFGPGAIQQHGFARNLDWTVGDSENVEGNPVVTLELKDDTYSRAMWDFSFHALYKVTLNAKSLSTELKVKNTDNKAFSFNTALHTYFRASVSGASVKGLKGCKTLNKHPDPNNPIEGSEERDVVTFPGFVDCVYLNASDELQLDNGLGDIISIKNTNWSDAVLWNPHLQMEACYKDFVCVENAKIGNVQLEPEQTWTAVQHLTIA*