AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar zhongmu-4 / Msa1219150


Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa1219150 MtrunA17_Chr8g0365801 98.551 414 6 0 1 414 1 414 0.0 845
Msa1219150 MtrunA17_Chr3g0117581 61.463 410 148 3 1 401 45 453 2.54e-173 507
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa1219150 AT4G32180.2 59.670 424 145 8 1 407 50 464 1.50e-168 492
Msa1219150 AT4G32180.3 59.670 424 145 8 1 407 50 464 1.50e-168 492
Msa1219150 AT4G32180.1 59.670 424 145 8 1 407 50 464 7.76e-167 491
Msa1219150 AT1G60440.1 62.595 393 131 1 19 411 4 380 1.24e-159 455
Msa1219150 AT1G60440.2 69.595 296 90 0 116 411 8 303 3.66e-134 387
Msa1219150 AT1G60440.3 55.725 393 119 2 19 411 4 341 6.83e-132 383

Find 99 sgRNAs with CRISPR-Local

Find 319 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
GTATAGGTGGAGGCACTTTC+TGG 0.182686 8_1:-81918968 Msa1219150:CDS
TACTTAAATGCCCTTCGTTT+TGG 0.195161 8_1:-81917529 Msa1219150:CDS
CCATATCTTCTTGTTAATAT+TGG 0.206082 8_1:-81919156 Msa1219150:CDS
TATCTGTTGCTGTTAATTTC+TGG 0.211148 8_1:-81917444 Msa1219150:intron
TACACAAAATGAATGTTATA+TGG 0.232948 8_1:+81922132 None:intergenic
GATTTCTCTGAAGTATTTCT+AGG 0.238490 8_1:+81920502 None:intergenic
GTTGCTGGAATTAAGTTATC+AGG 0.258626 8_1:-81918807 Msa1219150:CDS
ATAGATATTGGTTGACTTCC+GGG 0.270706 8_1:+81920180 None:intergenic
TTAATTACCTTAATAGATAT+TGG 0.275525 8_1:+81920168 None:intergenic
ATGCTTGTCGGAGATATTTA+TGG 0.278415 8_1:-81918764 Msa1219150:CDS
AAAGGCAATGTCTGATAAAA+AGG 0.281844 8_1:-81918547 Msa1219150:CDS
AGAATGATTTCAAATAATAT+TGG 0.285969 8_1:-81918480 Msa1219150:CDS
GGAGGCACTTTCTGGGGTTT+AGG 0.287312 8_1:-81918960 Msa1219150:CDS
ATGGTTCCTCCTACTGCCTT+TGG 0.299915 8_1:+81920480 None:intergenic
CTTCAGCTTTGATGAGTTGC+TGG 0.304425 8_1:-81918822 Msa1219150:intron
ACATGGCCTCAAAGAATTAT+TGG 0.307848 8_1:-81916676 Msa1219150:CDS
AGGAACCATCCTGTTCTTAA+AGG 0.312390 8_1:-81920466 Msa1219150:CDS
AAGTCAACCAATATCTATTA+AGG 0.312782 8_1:-81920175 Msa1219150:intron
GATAGTGTATCCATTGTAAA+AGG 0.314727 8_1:+81917463 None:intergenic
AATAGATATTGGTTGACTTC+CGG 0.321055 8_1:+81920179 None:intergenic
TTGCGGCATGAAGGATTTCT+TGG 0.322380 8_1:-81916729 Msa1219150:CDS
CCGAGAAGCCTATACCTATA+TGG 0.323228 8_1:-81919223 Msa1219150:CDS
ACATGAGTTGTTGATGGATT+AGG 0.328971 8_1:+81922004 None:intergenic
GATGGATTAGGATCGGAATT+TGG 0.330679 8_1:+81922016 None:intergenic
TATCATCTTGCTCTCGATAT+TGG 0.342399 8_1:-81921980 Msa1219150:CDS
ACTGCAATAGCATCTAGTTT+TGG 0.351488 8_1:-81918570 Msa1219150:CDS
TTGATCACCCATATAGGTAT+AGG 0.360507 8_1:+81919215 None:intergenic
CCAATATTAACAAGAAGATA+TGG 0.371904 8_1:+81919156 None:intergenic
CCATATAGGTATAGGCTTCT+CGG 0.381859 8_1:+81919223 None:intergenic
TTGAGCTTTCCTTTAAGAAC+AGG 0.385427 8_1:+81920457 None:intergenic
CTTCTTGTTAATATTGGATC+TGG 0.386128 8_1:-81919150 Msa1219150:CDS
TTGCCTTTGATCACCCATAT+AGG 0.387321 8_1:+81919209 None:intergenic
TATAGGTGGAGGCACTTTCT+GGG 0.396912 8_1:-81918967 Msa1219150:CDS
TATCCCTAGCCTTTCTTTGA+AGG 0.397775 8_1:+81919692 None:intergenic
GGAAAGTTTGAGCGAGTTAG+TGG 0.402390 8_1:-81918996 Msa1219150:CDS
TCTTGACAAGGAAGATGAAA+TGG 0.404418 8_1:-81919667 Msa1219150:CDS
TAACTTGGTAGGACTTTGTT+GGG 0.414963 8_1:+81916641 None:intergenic
TTCATATAGGTGGAAGGAAA+TGG 0.417291 8_1:-81919017 Msa1219150:intron
GCTTGACCAATAATTCTTTG+AGG 0.417859 8_1:+81916670 None:intergenic
TGATAAACATGAGTTGTTGA+TGG 0.420275 8_1:+81921998 None:intergenic
TGCGGCTTAGATGATGTTAT+TGG 0.423231 8_1:-81916541 Msa1219150:exon
AGATTACAGACCCGAAGATA+TGG 0.429533 8_1:-81918517 Msa1219150:CDS
TTACAAAACTTCATTAAAGA+AGG 0.450196 8_1:+81916449 None:intergenic
CAACTAGATGGTGAATTGTT+TGG 0.453366 8_1:-81916591 Msa1219150:CDS
ACACAAAATGAATGTTATAT+GGG 0.453519 8_1:+81922133 None:intergenic
TGTTATATGGGTTGGTAGGT+TGG 0.455446 8_1:+81922145 None:intergenic
GAAATGGATTGTCTTGTTGC+AGG 0.461214 8_1:-81919651 Msa1219150:CDS
ATCAACAGCGAAAGTTAACT+TGG 0.461877 8_1:+81916626 None:intergenic
AAGAGATCGAGCCATATCTT+CGG 0.465688 8_1:+81918506 None:intergenic
TTAACTTGGTAGGACTTTGT+TGG 0.466013 8_1:+81916640 None:intergenic
CGAGTTAGTGGAACGAGTAT+AGG 0.467173 8_1:-81918984 Msa1219150:CDS
ACCTCCAGGATGAAGTTTCA+TGG 0.470308 8_1:+81920381 None:intergenic
ATCCCTAGCCTTTCTTTGAA+GGG 0.482783 8_1:+81919693 None:intergenic
ATGCAGATCCCTTCAAAGAA+AGG 0.484576 8_1:-81919701 Msa1219150:CDS
CGAGAAGCCTATACCTATAT+GGG 0.487207 8_1:-81919222 Msa1219150:CDS
AGAGATCGAGCCATATCTTC+GGG 0.493566 8_1:+81918507 None:intergenic
ACCATTGTTGTGAAGGCCAC+AGG 0.503696 8_1:-81919741 Msa1219150:intron
CATCTTGCTCTCGATATTGG+AGG 0.519040 8_1:-81921977 Msa1219150:intron
GAAGGATTTCTTGGAGCTGT+AGG 0.521139 8_1:-81916720 Msa1219150:CDS
CGGAGATATTTATGGTGGAA+TGG 0.522518 8_1:-81918756 Msa1219150:CDS
GATTTCAAATAATATTGGAC+AGG 0.523645 8_1:-81918475 Msa1219150:intron
ATAGGTGGAGGCACTTTCTG+GGG 0.526740 8_1:-81918966 Msa1219150:CDS
AAAATGAATGTTATATGGGT+TGG 0.530165 8_1:+81922137 None:intergenic
GTTGTGAAGGCCACAGGTGG+TGG 0.533246 8_1:-81919735 Msa1219150:intron
GCAATGTTCTTGCGGCATGA+AGG 0.537851 8_1:-81916738 Msa1219150:CDS
AAGATGCATGGTCAACTAGA+TGG 0.539599 8_1:-81916603 Msa1219150:CDS
AAAGAGGTAGATATGCTTGT+CGG 0.545876 8_1:-81918776 Msa1219150:CDS
TTTCAATTCATATAGGTGGA+AGG 0.547834 8_1:-81919023 Msa1219150:intron
ATCTGGTGTTAGCATGATCA+AGG 0.553570 8_1:-81919133 Msa1219150:intron
ATCCCTTCAAAGAAAGGCTA+GGG 0.559074 8_1:-81919695 Msa1219150:CDS
TTCGCTGTTGATAAGATGCA+TGG 0.566331 8_1:-81916615 Msa1219150:CDS
AGAATTATTGGTCAAGCAAG+AGG 0.566501 8_1:-81916664 Msa1219150:CDS
TTGCTGGAATTAAGTTATCA+GGG 0.566970 8_1:-81918806 Msa1219150:CDS
AGTTGTTGATGGATTAGGAT+CGG 0.569966 8_1:+81922009 None:intergenic
GATCCCTTCAAAGAAAGGCT+AGG 0.570353 8_1:-81919696 Msa1219150:CDS
TCCTCTTCAGCCCAAAACGA+AGG 0.571979 8_1:+81917518 None:intergenic
AGAAATCCAAAGGCAGTAGG+AGG 0.578395 8_1:-81920486 Msa1219150:CDS
ACAGCGAAAGTTAACTTGGT+AGG 0.580761 8_1:+81916630 None:intergenic
AGTCAGCAGCAAGAAAATCC+CGG 0.580845 8_1:-81920198 Msa1219150:CDS
CAGAGAAATCCAAAGGCAGT+AGG 0.583723 8_1:-81920489 Msa1219150:CDS
AAGACCATGAAACTTCATCC+TGG 0.584192 8_1:-81920385 Msa1219150:CDS
TGAATGTTATATGGGTTGGT+AGG 0.592271 8_1:+81922141 None:intergenic
CTTGTCGGAGATATTTATGG+TGG 0.598989 8_1:-81918761 Msa1219150:CDS
ATACCTATATGGGTGATCAA+AGG 0.601771 8_1:-81919212 Msa1219150:CDS
CCTCTTCAGCCCAAAACGAA+GGG 0.612270 8_1:+81917519 None:intergenic
GTTAGTGGAACGAGTATAGG+TGG 0.612326 8_1:-81918981 Msa1219150:CDS
ATGTTTATCAGAACTCATGA+AGG 0.615934 8_1:+81916695 None:intergenic
AGGCGAAAGCAATGTTCTTG+CGG 0.618547 8_1:-81916746 Msa1219150:CDS
TGGTGGAATGGACTATGCAA+AGG 0.622264 8_1:-81918744 Msa1219150:intron
AATACTTCAGAGAAATCCAA+AGG 0.627707 8_1:-81920496 Msa1219150:CDS
GCTTTCCTTTAAGAACAGGA+TGG 0.628821 8_1:+81920461 None:intergenic
TTTGTATGAACCACCACCTG+TGG 0.635445 8_1:+81919725 None:intergenic
GCTAGGGATAAATCTTGACA+AGG 0.666525 8_1:-81919679 Msa1219150:CDS
AGTGGAACGAGTATAGGTGG+AGG 0.675883 8_1:-81918978 Msa1219150:CDS
TTATCAGGGCAACAACAAAG+AGG 0.690955 8_1:-81918792 Msa1219150:CDS
ACCATGAAACTTCATCCTGG+AGG 0.702347 8_1:-81920382 Msa1219150:intron
TATTGAGTGTAGTGTGTATG+CGG 0.711094 8_1:-81916559 Msa1219150:CDS
ATTGTTGTGAAGGCCACAGG+TGG 0.737174 8_1:-81919738 Msa1219150:intron
TTCATGAGTTCTGATAAACA+TGG 0.742858 8_1:-81916693 Msa1219150:CDS

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! TTTATTTGATGTTTAAATAT+GGG + chr8_1:81918959-81918978 None:intergenic 10.0%
!! ATTTATTTGATGTTTAAATA+TGG + chr8_1:81918960-81918979 None:intergenic 10.0%
!! AATATTAAAAAATTCAGAAT+TGG + chr8_1:81919437-81919456 None:intergenic 10.0%
!! AATTTAAAAAAAAGATTTAG+TGG - chr8_1:81920300-81920319 Msa1219150:intron 10.0%
!! AAGAAGAAAAATAAACAAAA+TGG - chr8_1:81916446-81916465 Msa1219150:three_prime_UTR 15.0%
!! TAATAAACGTTTAAATAAGT+TGG + chr8_1:81916756-81916775 None:intergenic 15.0%
!! TTTAGTAATATTAGAAATGT+GGG + chr8_1:81917689-81917708 None:intergenic 15.0%
!!! TTTTAGTAATATTAGAAATG+TGG + chr8_1:81917690-81917709 None:intergenic 15.0%
!!! TAATGAGTACAATATTATTT+TGG - chr8_1:81917874-81917893 Msa1219150:intron 15.0%
!! TTAATTACCTTAATAGATAT+TGG + chr8_1:81918343-81918362 None:intergenic 15.0%
!! AGAATGATTTCAAATAATAT+TGG - chr8_1:81920028-81920047 Msa1219150:intron 15.0%
!!! AATTTTTTTTTTGTTGAACA+TGG + chr8_1:81921367-81921386 None:intergenic 15.0%
!!! TGAATCTTTGTTTATTTTTT+AGG - chr8_1:81921729-81921748 Msa1219150:intron 15.0%
!! ACACAAAATGAATGTTATAT+GGG + chr8_1:81916378-81916397 None:intergenic 20.0%
!! TACACAAAATGAATGTTATA+TGG + chr8_1:81916379-81916398 None:intergenic 20.0%
!! ATTACTACTAACAGTAAAAA+TGG + chr8_1:81916597-81916616 None:intergenic 20.0%
!! ATCAAAATTGATCAGAATAT+TGG + chr8_1:81916676-81916695 None:intergenic 20.0%
!!! AATATTCTGATCAATTTTGA+TGG - chr8_1:81916675-81916694 Msa1219150:CDS 20.0%
!!! TTTTAGAATTAAGCTGTTTT+TGG - chr8_1:81916726-81916745 Msa1219150:CDS 20.0%
!!! TTTAGAATTAAGCTGTTTTT+GGG - chr8_1:81916727-81916746 Msa1219150:CDS 20.0%
!!! TATGCCTTAAGTTATTTTTT+TGG + chr8_1:81916974-81916993 None:intergenic 20.0%
!! AAAAAAATAACTTAAGGCAT+AGG - chr8_1:81916973-81916992 Msa1219150:intron 20.0%
!! TAATAGGATAATCCAATATA+AGG - chr8_1:81917046-81917065 Msa1219150:intron 20.0%
!! ACAAATTTCGAATTTATAGA+AGG - chr8_1:81917180-81917199 Msa1219150:intron 20.0%
!!! ATGATCTTCTTTTTTTATGT+AGG - chr8_1:81917271-81917290 Msa1219150:intron 20.0%
!!! GACTTTTGATTAAAAAGAAA+AGG - chr8_1:81917401-81917420 Msa1219150:intron 20.0%
!! TAATTCTTAGAATTTGGATT+GGG + chr8_1:81917825-81917844 None:intergenic 20.0%
!! ATAATTCTTAGAATTTGGAT+TGG + chr8_1:81917826-81917845 None:intergenic 20.0%
!! TGCAAATAATTCTTAGAATT+TGG + chr8_1:81917831-81917850 None:intergenic 20.0%
!!! ACAATATTATTTTGGTTTCT+TGG - chr8_1:81917882-81917901 Msa1219150:intron 20.0%
!!! ATACATTGCATTTTATTGAA+TGG + chr8_1:81918696-81918715 None:intergenic 20.0%
!! TTAAACATCAAATAAATGAC+TGG - chr8_1:81918963-81918982 Msa1219150:CDS 20.0%
!! AAGATTATTTATTGAACGAA+TGG + chr8_1:81919107-81919126 None:intergenic 20.0%
!!! AACATATATGCTAAACTTTT+GGG + chr8_1:81919136-81919155 None:intergenic 20.0%
!!! TCAATGTTTTCAATTCATAT+AGG - chr8_1:81919478-81919497 Msa1219150:intron 20.0%
!!! TTTTTAGGACATATTCATTA+TGG - chr8_1:81919614-81919633 Msa1219150:intron 20.0%
!!! TTTTAGGACATATTCATTAT+GGG - chr8_1:81919615-81919634 Msa1219150:intron 20.0%
!! ATTGTATCATCATATTAATC+AGG + chr8_1:81919819-81919838 None:intergenic 20.0%
!!! ATTACTCTAAACGTTTTAAA+TGG - chr8_1:81919837-81919856 Msa1219150:intron 20.0%
!! AAAAAATAAAACCAAATTGC+AGG + chr8_1:81920185-81920204 None:intergenic 20.0%
!! AATACAGAGAAGAAAAAAAA+GGG + chr8_1:81920267-81920286 None:intergenic 20.0%
!! TTATGTTAGATATTATCGTT+TGG - chr8_1:81920510-81920529 Msa1219150:CDS 20.0%
!! TTGTTTATTAATCCTATACT+AGG - chr8_1:81920569-81920588 Msa1219150:CDS 20.0%
!! CATTAAAATTGAACAGAAAA+TGG - chr8_1:81920756-81920775 Msa1219150:intron 20.0%
!! ACAATAACTATATAAATAGG+AGG + chr8_1:81920880-81920899 None:intergenic 20.0%
!! TGCACAATAACTATATAAAT+AGG + chr8_1:81920883-81920902 None:intergenic 20.0%
!!! AATATTTATGTCACTTTAAG+CGG - chr8_1:81920902-81920921 Msa1219150:intron 20.0%
!! AATCTCAAATGAGTTATTAT+TGG + chr8_1:81921184-81921203 None:intergenic 20.0%
!!! ACAAAAATTTTTGGTTCTAT+AGG - chr8_1:81921226-81921245 Msa1219150:intron 20.0%
!!! TGTTTATTTTTTAGGTCTAA+AGG - chr8_1:81921737-81921756 Msa1219150:intron 20.0%
!! TTACAAAACTTCATTAAAGA+AGG + chr8_1:81922062-81922081 None:intergenic 20.0%
!!! CTTTAATGAAGTTTTGTAAT+AGG - chr8_1:81922063-81922082 Msa1219150:exon 20.0%
!!! CTATTTTTCTATTACATTTC+TGG + chr8_1:81922091-81922110 None:intergenic 20.0%
!!! TTTTCATTGATATAAACAAG+TGG + chr8_1:81922117-81922136 None:intergenic 20.0%
! AAAATGAATGTTATATGGGT+TGG + chr8_1:81916374-81916393 None:intergenic 25.0%
! ATTGATCAGAATATTGGAAA+AGG + chr8_1:81916670-81916689 None:intergenic 25.0%
! CAAGCCAAAAAAATAACTTA+AGG - chr8_1:81916967-81916986 Msa1219150:intron 25.0%
! TACACAAACACTTGTATAAT+AGG - chr8_1:81917030-81917049 Msa1219150:intron 25.0%
!! CTTGGTAATTTCTTAACAAT+AGG - chr8_1:81917095-81917114 Msa1219150:intron 25.0%
! TCGAATTTATAGAAGGATTA+TGG - chr8_1:81917187-81917206 Msa1219150:intron 25.0%
! TCTAAGTTTATTGTTGAGAA+TGG - chr8_1:81917341-81917360 Msa1219150:intron 25.0%
! CTAAGTTTATTGTTGAGAAT+GGG - chr8_1:81917342-81917361 Msa1219150:intron 25.0%
!! TTCTGATTTTGTTAGAATTG+TGG - chr8_1:81917432-81917451 Msa1219150:intron 25.0%
! ATACAATACAAGAGAATCAA+AGG + chr8_1:81917550-81917569 None:intergenic 25.0%
! GATTCTCTTGTATTGTATAT+AGG - chr8_1:81917552-81917571 Msa1219150:intron 25.0%
! AGGAGATTAAATTAACACTA+AGG - chr8_1:81917572-81917591 Msa1219150:intron 25.0%
! GGAGATTAAATTAACACTAA+GGG - chr8_1:81917573-81917592 Msa1219150:intron 25.0%
! CCTAACAAAACATAATTGTA+AGG + chr8_1:81917792-81917811 None:intergenic 25.0%
!!! CCTTACAATTATGTTTTGTT+AGG - chr8_1:81917789-81917808 Msa1219150:intron 25.0%
! TTATTTGCAATGTAAAGTGT+TGG - chr8_1:81917842-81917861 Msa1219150:intron 25.0%
!!! ATATTATTTTGGTTTCTTGG+TGG - chr8_1:81917885-81917904 Msa1219150:intron 25.0%
!! AAAAGATGAAGATCATTTTG+TGG - chr8_1:81917963-81917982 Msa1219150:intron 25.0%
! TTACGTCAATTAATTGTAAC+TGG - chr8_1:81918273-81918292 Msa1219150:intron 25.0%
! AAGTCAACCAATATCTATTA+AGG - chr8_1:81918333-81918352 Msa1219150:intron 25.0%
!! TTGATTTTTACTAAGCTTCT+AGG + chr8_1:81918566-81918585 None:intergenic 25.0%
! AGCATAATTAGTATGTTAGT+AGG + chr8_1:81918909-81918928 None:intergenic 25.0%
!! CAACATATATGCTAAACTTT+TGG + chr8_1:81919137-81919156 None:intergenic 25.0%
!!! TACCACATTGATTAGTTTTA+TGG - chr8_1:81919160-81919179 Msa1219150:CDS 25.0%
! CCAATATTAACAAGAAGATA+TGG + chr8_1:81919355-81919374 None:intergenic 25.0%
! CCATATCTTCTTGTTAATAT+TGG - chr8_1:81919352-81919371 Msa1219150:intron 25.0%
!! ATGTTTTCAATTCATATAGG+TGG - chr8_1:81919481-81919500 Msa1219150:intron 25.0%
!! TTCTTTCATTGATAACAGAT+TGG - chr8_1:81919905-81919924 Msa1219150:intron 25.0%
! GATTTCAAATAATATTGGAC+AGG - chr8_1:81920033-81920052 Msa1219150:intron 25.0%
! GTACCTTTCTATGTTTATAA+TGG - chr8_1:81920220-81920239 Msa1219150:intron 25.0%
! CAACCATTATAAACATAGAA+AGG + chr8_1:81920226-81920245 None:intergenic 25.0%
! CTTTCTATGTTTATAATGGT+TGG - chr8_1:81920224-81920243 Msa1219150:intron 25.0%
! GAATACAGAGAAGAAAAAAA+AGG + chr8_1:81920268-81920287 None:intergenic 25.0%
!! AACATGCAAAGTATCATTTA+GGG + chr8_1:81920357-81920376 None:intergenic 25.0%
!! TAACATGCAAAGTATCATTT+AGG + chr8_1:81920358-81920377 None:intergenic 25.0%
!! TGTTATTGATAGTTGTTTGA+TGG - chr8_1:81920373-81920392 Msa1219150:intron 25.0%
!! TTTTATTAGCGAATCTTCTT+GGG - chr8_1:81920540-81920559 Msa1219150:CDS 25.0%
! AAAATTAGAATTCTGTCCAA+TGG - chr8_1:81920779-81920798 Msa1219150:intron 25.0%
! TAAGAATTTAACTCTGCAAT+TGG + chr8_1:81920846-81920865 None:intergenic 25.0%
!!! ATATTTATGTCACTTTAAGC+GGG - chr8_1:81920903-81920922 Msa1219150:intron 25.0%
!! AACTAATATGGATTATGTTG+TGG - chr8_1:81921138-81921157 Msa1219150:intron 25.0%
!! ACTAATATGGATTATGTTGT+GGG - chr8_1:81921139-81921158 Msa1219150:intron 25.0%
!! AATTTTTGTGAATGTTGCAA+GGG + chr8_1:81921215-81921234 None:intergenic 25.0%
!! AAATTTTTGTGAATGTTGCA+AGG + chr8_1:81921216-81921235 None:intergenic 25.0%
!! GCAACATTCACAAAAATTTT+TGG - chr8_1:81921217-81921236 Msa1219150:intron 25.0%
!! ATGTTCAACTAGTATTGTTT+TGG + chr8_1:81921253-81921272 None:intergenic 25.0%
! TTTCTGATTAAAATCATGTC+AGG + chr8_1:81921697-81921716 None:intergenic 25.0%
TGATAAACATGAGTTGTTGA+TGG + chr8_1:81916513-81916532 None:intergenic 30.0%
!! TGATCAATTTTGATGGAGAT+TGG - chr8_1:81916682-81916701 Msa1219150:CDS 30.0%
! AGCTTGTTTACACCTTATAT+TGG + chr8_1:81917061-81917080 None:intergenic 30.0%
TGTAACTGAATACACCTAAT+TGG - chr8_1:81917231-81917250 Msa1219150:intron 30.0%
TGAATACACCTAATTGGATA+AGG - chr8_1:81917237-81917256 Msa1219150:intron 30.0%
AACAACAACCTTATCCAATT+AGG + chr8_1:81917248-81917267 None:intergenic 30.0%
TAGTTGAATTGCTATCACTT+AGG - chr8_1:81917314-81917333 Msa1219150:intron 30.0%
! TGATTTTGTTAGAATTGTGG+AGG - chr8_1:81917435-81917454 Msa1219150:intron 30.0%
GGCATTATTATAGCAGTAAA+TGG + chr8_1:81917529-81917548 None:intergenic 30.0%
!! GATTTCTCTGAAGTATTTCT+AGG + chr8_1:81918009-81918028 None:intergenic 30.0%
AATACTTCAGAGAAATCCAA+AGG - chr8_1:81918012-81918031 Msa1219150:intron 30.0%
GCAGAATAGTAATAAGAATG+TGG + chr8_1:81918250-81918269 None:intergenic 30.0%
! AATAGATATTGGTTGACTTC+CGG + chr8_1:81918332-81918351 None:intergenic 30.0%
ATAAGGGAAACAGAAACAAA+TGG + chr8_1:81918398-81918417 None:intergenic 30.0%
! ATGTTTAGTATTGAAGCACT+TGG - chr8_1:81918714-81918733 Msa1219150:intron 30.0%
AATGAAAACCATTGTTGTGA+AGG - chr8_1:81918760-81918779 Msa1219150:CDS 30.0%
CACAAACAACTACACTATTA+TGG + chr8_1:81919186-81919205 None:intergenic 30.0%
! AATTCTCAAAGTGCTTAAGA+AGG + chr8_1:81919213-81919232 None:intergenic 30.0%
! TGTCTTGTTCTTCTTTCTAT+AGG - chr8_1:81919255-81919274 Msa1219150:intron 30.0%
CTTCTTGTTAATATTGGATC+TGG - chr8_1:81919358-81919377 Msa1219150:intron 30.0%
TTTCAATTCATATAGGTGGA+AGG - chr8_1:81919485-81919504 Msa1219150:intron 30.0%
TTGCTGGAATTAAGTTATCA+GGG - chr8_1:81919702-81919721 Msa1219150:CDS 30.0%
ATGGAGATCAACATTATCTT+AGG - chr8_1:81919856-81919875 Msa1219150:intron 30.0%
TGGAGATCAACATTATCTTA+GGG - chr8_1:81919857-81919876 Msa1219150:intron 30.0%
AACATTATCTTAGGGCTATT+CGG - chr8_1:81919865-81919884 Msa1219150:intron 30.0%
!!! AATAGCATCTAGTTTTGGAA+AGG - chr8_1:81919943-81919962 Msa1219150:intron 30.0%
AAAGGCAATGTCTGATAAAA+AGG - chr8_1:81919961-81919980 Msa1219150:intron 30.0%
CACTAGATACATTGTACAAA+TGG + chr8_1:81920134-81920153 None:intergenic 30.0%
CTTAGTCGCTAAATAAAAGA+AGG - chr8_1:81920329-81920348 Msa1219150:intron 30.0%
! AGCTTTTACATACATATGCA+TGG - chr8_1:81920487-81920506 Msa1219150:CDS 30.0%
!! GTTTTATTAGCGAATCTTCT+TGG - chr8_1:81920539-81920558 Msa1219150:CDS 30.0%
! GTTTTCATTATGCAGATGTT+AGG + chr8_1:81920651-81920670 None:intergenic 30.0%
CTGTTATGAAGCGAATAAAA+AGG - chr8_1:81920691-81920710 Msa1219150:intron 30.0%
ATGAAGCGAATAAAAAGGAA+TGG - chr8_1:81920696-81920715 Msa1219150:intron 30.0%
! TTTAAGCGGGAAATGAATTT+TGG - chr8_1:81920916-81920935 Msa1219150:intron 30.0%
!!! TTGGTGGATTTTTTATTCAG+AGG - chr8_1:81921019-81921038 Msa1219150:intron 30.0%
GATAGTGTATCCATTGTAAA+AGG + chr8_1:81921048-81921067 None:intergenic 30.0%
! TATCTGTTGCTGTTAATTTC+TGG - chr8_1:81921064-81921083 Msa1219150:intron 30.0%
! TTAGTTATGAAGCACCAAAT+TGG + chr8_1:81921124-81921143 None:intergenic 30.0%
! TTGGTGCTTCATAACTAATA+TGG - chr8_1:81921126-81921145 Msa1219150:intron 30.0%
AAGCCAATGTTTATCTATGT+TGG - chr8_1:81921472-81921491 Msa1219150:intron 30.0%
ATGCCAACATAGATAAACAT+TGG + chr8_1:81921478-81921497 None:intergenic 30.0%
!! ACAATTTTAGCACATTCCTA+AGG - chr8_1:81921532-81921551 Msa1219150:intron 30.0%
!! CAATTTTAGCACATTCCTAA+GGG - chr8_1:81921533-81921552 Msa1219150:intron 30.0%
TAATGCATGGAAAGTTTGAT+AGG - chr8_1:81921638-81921657 Msa1219150:intron 30.0%
!!! ATTTTTTAGGTCTAAAGGTG+AGG - chr8_1:81921742-81921761 Msa1219150:intron 30.0%
ATGTTTATCAGAACTCATGA+AGG + chr8_1:81921816-81921835 None:intergenic 30.0%
! TTCATGAGTTCTGATAAACA+TGG - chr8_1:81921815-81921834 Msa1219150:intron 30.0%
!! TGAATGTTATATGGGTTGGT+AGG + chr8_1:81916370-81916389 None:intergenic 35.0%
!! AGTTGTTGATGGATTAGGAT+CGG + chr8_1:81916502-81916521 None:intergenic 35.0%
!! ACATGAGTTGTTGATGGATT+AGG + chr8_1:81916507-81916526 None:intergenic 35.0%
TATCATCTTGCTCTCGATAT+TGG - chr8_1:81916528-81916547 Msa1219150:three_prime_UTR 35.0%
!! TCAATTTTGATGGAGATTGG+TGG - chr8_1:81916685-81916704 Msa1219150:CDS 35.0%
TCAATTGAAGTCCAATCGTT+CGG - chr8_1:81916811-81916830 Msa1219150:intron 35.0%
TTCAGCTAGCAATTGAACTA+AGG + chr8_1:81916842-81916861 None:intergenic 35.0%
AATCTATACTAGTGCGCTTA+CGG - chr8_1:81916941-81916960 Msa1219150:intron 35.0%
TAGCACTTGTGATCAACAAT+AGG - chr8_1:81917132-81917151 Msa1219150:intron 35.0%
TAGAAGGATTATGGTTCAAC+AGG - chr8_1:81917196-81917215 Msa1219150:intron 35.0%
! TATGTAGGTTGAAGTGATCA+TGG - chr8_1:81917286-81917305 Msa1219150:intron 35.0%
!! TTATTGTTGAGAATGGGTTG+TGG - chr8_1:81917348-81917367 Msa1219150:intron 35.0%
!! TATTGTTGAGAATGGGTTGT+GGG - chr8_1:81917349-81917368 Msa1219150:intron 35.0%
TTCTTAGACTAGAAAACCGT+AGG - chr8_1:81917635-81917654 Msa1219150:intron 35.0%
TGGTAATCTTACTTGACCTA+CGG + chr8_1:81917654-81917673 None:intergenic 35.0%
AATGTGGGAAACAAACACAA+TGG + chr8_1:81917674-81917693 None:intergenic 35.0%
TTTGACAATCTTTCACAGTC+TGG - chr8_1:81917743-81917762 Msa1219150:intron 35.0%
TATTGTACTCATTAAACGCC+AGG + chr8_1:81917868-81917887 None:intergenic 35.0%
AATGTTCTCTGTCTGTTGAT+AGG - chr8_1:81917913-81917932 Msa1219150:intron 35.0%
! GATGAAGATCATTTTGTGGA+CGG - chr8_1:81917967-81917986 Msa1219150:intron 35.0%
! TTGAGCTTTCCTTTAAGAAC+AGG + chr8_1:81918054-81918073 None:intergenic 35.0%
GACAAACACTATCAAGTATC+AGG + chr8_1:81918187-81918206 None:intergenic 35.0%
! TTGTAACTGGTGATGAATTC+AGG - chr8_1:81918286-81918305 Msa1219150:intron 35.0%
! ATAGATATTGGTTGACTTCC+GGG + chr8_1:81918331-81918350 None:intergenic 35.0%
GGACACAAATTCAATAGCTA+AGG + chr8_1:81918524-81918543 None:intergenic 35.0%
TAGCTATTGAATTTGTGTCC+TGG - chr8_1:81918524-81918543 Msa1219150:CDS 35.0%
TCTTGACAAGGAAGATGAAA+TGG - chr8_1:81918841-81918860 Msa1219150:intron 35.0%
GGCCATAAAACTAATCAATG+TGG + chr8_1:81919165-81919184 None:intergenic 35.0%
! CTTTGAGAATTTCGCAATAC+AGG - chr8_1:81919222-81919241 Msa1219150:CDS 35.0%
TTGATCACCCATATAGGTAT+AGG + chr8_1:81919296-81919315 None:intergenic 35.0%
ATACCTATATGGGTGATCAA+AGG - chr8_1:81919296-81919315 Msa1219150:intron 35.0%
TTCATATAGGTGGAAGGAAA+TGG - chr8_1:81919491-81919510 Msa1219150:intron 35.0%
!! AGCTTTTAACTCAATGCAAG+AGG - chr8_1:81919573-81919592 Msa1219150:intron 35.0%
GTTAACATCAATGCACTTTG+TGG - chr8_1:81919657-81919676 Msa1219150:CDS 35.0%
GTTGCTGGAATTAAGTTATC+AGG - chr8_1:81919701-81919720 Msa1219150:CDS 35.0%
AAAGAGGTAGATATGCTTGT+CGG - chr8_1:81919732-81919751 Msa1219150:intron 35.0%
ATGCTTGTCGGAGATATTTA+TGG - chr8_1:81919744-81919763 Msa1219150:intron 35.0%
!! ACTGCAATAGCATCTAGTTT+TGG - chr8_1:81919938-81919957 Msa1219150:intron 35.0%
AGAATATTGTTGTGTGCACA+AGG - chr8_1:81920403-81920422 Msa1219150:CDS 35.0%
GAATATTGTTGTGTGCACAA+GGG - chr8_1:81920404-81920423 Msa1219150:CDS 35.0%
CTACTGAAATCAGTGCAAAA+TGG + chr8_1:81920440-81920459 None:intergenic 35.0%
!!! CATTTTGCACTGATTTCAGT+AGG - chr8_1:81920438-81920457 Msa1219150:CDS 35.0%
GGCAGAGTTAAATATGATTG+TGG - chr8_1:81920459-81920478 Msa1219150:CDS 35.0%
! CTATACTAGGTGTCAGTTTT+CGG - chr8_1:81920582-81920601 Msa1219150:intron 35.0%
ATGTTAGGTTAGAGAATGGT+AGG + chr8_1:81920636-81920655 None:intergenic 35.0%
! TACTTAAATGCCCTTCGTTT+TGG - chr8_1:81920979-81920998 Msa1219150:intron 35.0%
! ACTTAAATGCCCTTCGTTTT+GGG - chr8_1:81920980-81920999 Msa1219150:intron 35.0%
!!! CTGAAGAGGATATTTTTTGG+TGG - chr8_1:81921003-81921022 Msa1219150:intron 35.0%
TGAACACAAAAGATAGCCTT+TGG - chr8_1:81921285-81921304 Msa1219150:intron 35.0%
GAACACAAAAGATAGCCTTT+GGG - chr8_1:81921286-81921305 Msa1219150:intron 35.0%
!! CTCTCATTTGCTATAATGCA+TGG - chr8_1:81921625-81921644 Msa1219150:intron 35.0%
ACATGGCCTCAAAGAATTAT+TGG - chr8_1:81921832-81921851 Msa1219150:intron 35.0%
GCTTGACCAATAATTCTTTG+AGG + chr8_1:81921841-81921860 None:intergenic 35.0%
AGAATTATTGGTCAAGCAAG+AGG - chr8_1:81921844-81921863 Msa1219150:intron 35.0%
TAACTTGGTAGGACTTTGTT+GGG + chr8_1:81921870-81921889 None:intergenic 35.0%
! TTAACTTGGTAGGACTTTGT+TGG + chr8_1:81921871-81921890 None:intergenic 35.0%
ATCAACAGCGAAAGTTAACT+TGG + chr8_1:81921885-81921904 None:intergenic 35.0%
CAACTAGATGGTGAATTGTT+TGG - chr8_1:81921917-81921936 Msa1219150:intron 35.0%
TATTGAGTGTAGTGTGTATG+CGG - chr8_1:81921949-81921968 Msa1219150:intron 35.0%
!! TGTTATATGGGTTGGTAGGT+TGG + chr8_1:81916366-81916385 None:intergenic 40.0%
!! GATGGATTAGGATCGGAATT+TGG + chr8_1:81916495-81916514 None:intergenic 40.0%
!! GCTATTTTCGTAAGCTCTCT+CGG - chr8_1:81917002-81917021 Msa1219150:intron 40.0%
AGCTCTTTCAAATGCACTCT+TGG - chr8_1:81917077-81917096 Msa1219150:intron 40.0%
!! ATTGTTGAGAATGGGTTGTG+GGG - chr8_1:81917350-81917369 Msa1219150:intron 40.0%
AGGAACCATCCTGTTCTTAA+AGG - chr8_1:81918042-81918061 Msa1219150:intron 40.0%
! GCTTTCCTTTAAGAACAGGA+TGG + chr8_1:81918050-81918069 None:intergenic 40.0%
AAGACCATGAAACTTCATCC+TGG - chr8_1:81918123-81918142 Msa1219150:intron 40.0%
! ACCTATCTGCAGAAGCATAA+GGG + chr8_1:81918414-81918433 None:intergenic 40.0%
TTGCTTCAGATCATAGCAGA+GGG + chr8_1:81918493-81918512 None:intergenic 40.0%
ATTGCTTCAGATCATAGCAG+AGG + chr8_1:81918494-81918513 None:intergenic 40.0%
GGAATATATGTATGCTGACC+AGG + chr8_1:81918545-81918564 None:intergenic 40.0%
ATGCAGATCCCTTCAAAGAA+AGG - chr8_1:81918807-81918826 Msa1219150:CDS 40.0%
ATCCCTTCAAAGAAAGGCTA+GGG - chr8_1:81918813-81918832 Msa1219150:CDS 40.0%
! ATCCCTAGCCTTTCTTTGAA+GGG + chr8_1:81918818-81918837 None:intergenic 40.0%
! TATCCCTAGCCTTTCTTTGA+AGG + chr8_1:81918819-81918838 None:intergenic 40.0%
GCTAGGGATAAATCTTGACA+AGG - chr8_1:81918829-81918848 Msa1219150:intron 40.0%
!! GAAATGGATTGTCTTGTTGC+AGG - chr8_1:81918857-81918876 Msa1219150:intron 40.0%
! AGGAGCAAATTTTCTTCTCG+AGG - chr8_1:81918877-81918896 Msa1219150:intron 40.0%
! GCAAATTTTCTTCTCGAGGT+AGG - chr8_1:81918881-81918900 Msa1219150:intron 40.0%
CCATATAGGTATAGGCTTCT+CGG + chr8_1:81919288-81919307 None:intergenic 40.0%
CGAGAAGCCTATACCTATAT+GGG - chr8_1:81919286-81919305 Msa1219150:intron 40.0%
TTGCCTTTGATCACCCATAT+AGG + chr8_1:81919302-81919321 None:intergenic 40.0%
! ATCTGGTGTTAGCATGATCA+AGG - chr8_1:81919375-81919394 Msa1219150:intron 40.0%
TGGGTTCTATATAGACTCAC+AGG - chr8_1:81919634-81919653 Msa1219150:CDS 40.0%
GGGTTCTATATAGACTCACA+GGG - chr8_1:81919635-81919654 Msa1219150:CDS 40.0%
TTATCAGGGCAACAACAAAG+AGG - chr8_1:81919716-81919735 Msa1219150:CDS 40.0%
CTTGTCGGAGATATTTATGG+TGG - chr8_1:81919747-81919766 Msa1219150:intron 40.0%
! CGGAGATATTTATGGTGGAA+TGG - chr8_1:81919752-81919771 Msa1219150:intron 40.0%
AGATTACAGACCCGAAGATA+TGG - chr8_1:81919991-81920010 Msa1219150:intron 40.0%
AAGAGATCGAGCCATATCTT+CGG + chr8_1:81920005-81920024 None:intergenic 40.0%
CAGTAGCATTTCGAAATCCA+CGG + chr8_1:81920070-81920089 None:intergenic 40.0%
!! AGGTATCGAGACATGCAAAA+AGG + chr8_1:81920165-81920184 None:intergenic 40.0%
ATGTCTCGATACCTGCAATT+TGG - chr8_1:81920171-81920190 Msa1219150:intron 40.0%
CGAAAACTGACACCTAGTAT+AGG + chr8_1:81920584-81920603 None:intergenic 40.0%
! GTCAGTTTTCGGTATCTAAG+AGG - chr8_1:81920593-81920612 Msa1219150:intron 40.0%
TTAGAGAATGGTAGGAAGAG+AGG + chr8_1:81920628-81920647 None:intergenic 40.0%
GCAGATGTTAGGTTAGAGAA+TGG + chr8_1:81920640-81920659 None:intergenic 40.0%
CTTTGTGAAGAGGAAACCAT+TGG + chr8_1:81920798-81920817 None:intergenic 40.0%
CAATGGTTTCCTCTTCACAA+AGG - chr8_1:81920796-81920815 Msa1219150:intron 40.0%
AGAAGTGATCCTTTGTGAAG+AGG + chr8_1:81920808-81920827 None:intergenic 40.0%
!!! GGGCTGAAGAGGATATTTTT+TGG - chr8_1:81921000-81921019 Msa1219150:intron 40.0%
!!! TCAGAGGCATCCTTTTACAA+TGG - chr8_1:81921035-81921054 Msa1219150:intron 40.0%
!! AATTGGCAGTTGATGAACAG+AGG + chr8_1:81921107-81921126 None:intergenic 40.0%
CTGTTCATCAACTGCCAATT+TGG - chr8_1:81921107-81921126 Msa1219150:intron 40.0%
! CTGATCATGGTGATGTTTGT+CGG + chr8_1:81921318-81921337 None:intergenic 40.0%
TTTAGCACATTCCTAAGGGT+TGG - chr8_1:81921537-81921556 Msa1219150:intron 40.0%
GGAAGCAAGTTATGGTTTGA+AGG - chr8_1:81921562-81921581 Msa1219150:intron 40.0%
! ACAGCGAAAGTTAACTTGGT+AGG + chr8_1:81921881-81921900 None:intergenic 40.0%
! TTCGCTGTTGATAAGATGCA+TGG - chr8_1:81921893-81921912 Msa1219150:intron 40.0%
AAGATGCATGGTCAACTAGA+TGG - chr8_1:81921905-81921924 Msa1219150:intron 40.0%
TGCGGCTTAGATGATGTTAT+TGG - chr8_1:81921967-81921986 Msa1219150:intron 40.0%
CATCTTGCTCTCGATATTGG+AGG - chr8_1:81916531-81916550 Msa1219150:three_prime_UTR 45.0%
CTAAGGTTCTACCGAACGAT+TGG + chr8_1:81916825-81916844 None:intergenic 45.0%
ATCATTGATCCGCTTCTCTG+TGG - chr8_1:81916865-81916884 Msa1219150:intron 45.0%
TCATTGATCCGCTTCTCTGT+GGG - chr8_1:81916866-81916885 Msa1219150:intron 45.0%
ACAGCTTAACTGCATTCCTC+CGG + chr8_1:81916893-81916912 None:intergenic 45.0%
CAATCTTTCACAGTCTGGTG+AGG - chr8_1:81917748-81917767 Msa1219150:intron 45.0%
!! TGCAATGTAAAGTGTTGGCC+TGG - chr8_1:81917847-81917866 Msa1219150:intron 45.0%
! AGATCATTTTGTGGACGGTG+AGG - chr8_1:81917972-81917991 Msa1219150:intron 45.0%
CAGAGAAATCCAAAGGCAGT+AGG - chr8_1:81918019-81918038 Msa1219150:intron 45.0%
AGAAATCCAAAGGCAGTAGG+AGG - chr8_1:81918022-81918041 Msa1219150:intron 45.0%
ACCATGAAACTTCATCCTGG+AGG - chr8_1:81918126-81918145 Msa1219150:intron 45.0%
ACCTCCAGGATGAAGTTTCA+TGG + chr8_1:81918130-81918149 None:intergenic 45.0%
AAAATTCTGCACACACCTCC+AGG + chr8_1:81918144-81918163 None:intergenic 45.0%
AGTCAGCAGCAAGAAAATCC+CGG - chr8_1:81918310-81918329 Msa1219150:intron 45.0%
TCCCTTATGCTTCTGCAGAT+AGG - chr8_1:81918410-81918429 Msa1219150:intron 45.0%
! CACCTATCTGCAGAAGCATA+AGG + chr8_1:81918415-81918434 None:intergenic 45.0%
CATAGCAGAGGGACTCAAAT+TGG + chr8_1:81918482-81918501 None:intergenic 45.0%
GCACATGCAGATGTAGAAGT+TGG - chr8_1:81918645-81918664 Msa1219150:intron 45.0%
TTTGTATGAACCACCACCTG+TGG + chr8_1:81918786-81918805 None:intergenic 45.0%
GATCCCTTCAAAGAAAGGCT+AGG - chr8_1:81918812-81918831 Msa1219150:CDS 45.0%
CCGAGAAGCCTATACCTATA+TGG - chr8_1:81919285-81919304 Msa1219150:intron 45.0%
GGAAAGTTTGAGCGAGTTAG+TGG - chr8_1:81919512-81919531 Msa1219150:intron 45.0%
CGAGTTAGTGGAACGAGTAT+AGG - chr8_1:81919524-81919543 Msa1219150:intron 45.0%
GTTAGTGGAACGAGTATAGG+TGG - chr8_1:81919527-81919546 Msa1219150:intron 45.0%
!! TATAGGTGGAGGCACTTTCT+GGG - chr8_1:81919541-81919560 Msa1219150:intron 45.0%
! CTTCAGCTTTGATGAGTTGC+TGG - chr8_1:81919686-81919705 Msa1219150:CDS 45.0%
!! TGGTGGAATGGACTATGCAA+AGG - chr8_1:81919764-81919783 Msa1219150:intron 45.0%
AGAGATCGAGCCATATCTTC+GGG + chr8_1:81920004-81920023 None:intergenic 45.0%
CGACAAACATCACCATGATC+AGG - chr8_1:81921316-81921335 Msa1219150:intron 45.0%
GTTCAGACATAGCCTGATCA+TGG + chr8_1:81921331-81921350 None:intergenic 45.0%
CTCAGAAGCAAGTGTCAAGT+GGG + chr8_1:81921673-81921692 None:intergenic 45.0%
ACTCAGAAGCAAGTGTCAAG+TGG + chr8_1:81921674-81921693 None:intergenic 45.0%
AGGCGAAAGCAATGTTCTTG+CGG - chr8_1:81921762-81921781 Msa1219150:intron 45.0%
TTGCGGCATGAAGGATTTCT+TGG - chr8_1:81921779-81921798 Msa1219150:intron 45.0%
GAAGGATTTCTTGGAGCTGT+AGG - chr8_1:81921788-81921807 Msa1219150:intron 45.0%
!!! TTTATTACTTATTTATTTTT+AGG - chr8_1:81919599-81919618 Msa1219150:intron 5.0%
! ATGGGTTGTGGGGTTGACAT+TGG - chr8_1:81917360-81917379 Msa1219150:intron 50.0%
! TCATTTTGTGGACGGTGAGG+CGG - chr8_1:81917975-81917994 Msa1219150:intron 50.0%
ATGGTTCCTCCTACTGCCTT+TGG + chr8_1:81918031-81918050 None:intergenic 50.0%
ACCATTGTTGTGAAGGCCAC+AGG - chr8_1:81918767-81918786 Msa1219150:CDS 50.0%
ACCTGTGGCCTTCACAACAA+TGG + chr8_1:81918771-81918790 None:intergenic 50.0%
ATTGTTGTGAAGGCCACAGG+TGG - chr8_1:81918770-81918789 Msa1219150:CDS 50.0%
AGTGGAACGAGTATAGGTGG+AGG - chr8_1:81919530-81919549 Msa1219150:intron 50.0%
!! GTATAGGTGGAGGCACTTTC+TGG - chr8_1:81919540-81919559 Msa1219150:intron 50.0%
!! ATAGGTGGAGGCACTTTCTG+GGG - chr8_1:81919542-81919561 Msa1219150:intron 50.0%
GACAGGTCAGTATTGTACCG+TGG - chr8_1:81920050-81920069 Msa1219150:intron 50.0%
CCTCTTCAGCCCAAAACGAA+GGG + chr8_1:81920992-81921011 None:intergenic 50.0%
TCCTCTTCAGCCCAAAACGA+AGG + chr8_1:81920993-81921012 None:intergenic 50.0%
GTTTGTCGGTGACTTCCCAA+AGG + chr8_1:81921304-81921323 None:intergenic 50.0%
GGTTGGCAGGAAGCAAGTTA+TGG - chr8_1:81921554-81921573 Msa1219150:intron 50.0%
GCAATGTTCTTGCGGCATGA+AGG - chr8_1:81921770-81921789 Msa1219150:intron 50.0%
!! GGAGGCACTTTCTGGGGTTT+AGG - chr8_1:81919548-81919567 Msa1219150:intron 55.0%
!! CCCTTCGTTTTGGGCTGAAG+AGG - chr8_1:81920989-81921008 Msa1219150:intron 55.0%
! GCACATTCCTAAGGGTTGGC+AGG - chr8_1:81921541-81921560 Msa1219150:intron 55.0%
CTTGCTTCCTGCCAACCCTT+AGG + chr8_1:81921551-81921570 None:intergenic 55.0%
GATCCGCTTCTCTGTGGGAC+CGG - chr8_1:81916871-81916890 Msa1219150:intron 60.0%
GTTGTGAAGGCCACAGGTGG+TGG - chr8_1:81918773-81918792 Msa1219150:CDS 60.0%
CCTCCGGTCCCACAGAGAAG+CGG + chr8_1:81916877-81916896 None:intergenic 65.0%
CCGCTTCTCTGTGGGACCGG+AGG - chr8_1:81916874-81916893 Msa1219150:intron 70.0%
Chromosome Type Strat End Strand Name
chr8_1 gene 81916356 81922174 81916356 ID=Msa1219150;Name=Msa1219150
chr8_1 mRNA 81916356 81922174 81916356 ID=Msa1219150-mRNA-1;Parent=Msa1219150;Name=Msa1219150-mRNA-1;_AED=0.10;_eAED=0.10;_QI=109|1|1|1|1|1|10|198|414
chr8_1 exon 81916356 81916779 81916356 ID=Msa1219150-mRNA-1:exon:29057;Parent=Msa1219150-mRNA-1
chr8_1 exon 81917445 81917557 81917445 ID=Msa1219150-mRNA-1:exon:29056;Parent=Msa1219150-mRNA-1
chr8_1 exon 81918476 81918607 81918476 ID=Msa1219150-mRNA-1:exon:29055;Parent=Msa1219150-mRNA-1
chr8_1 exon 81918745 81918838 81918745 ID=Msa1219150-mRNA-1:exon:29054;Parent=Msa1219150-mRNA-1
chr8_1 exon 81918936 81919030 81918936 ID=Msa1219150-mRNA-1:exon:29053;Parent=Msa1219150-mRNA-1
chr8_1 exon 81919134 81919253 81919134 ID=Msa1219150-mRNA-1:exon:29052;Parent=Msa1219150-mRNA-1
chr8_1 exon 81919632 81919748 81919632 ID=Msa1219150-mRNA-1:exon:29051;Parent=Msa1219150-mRNA-1
chr8_1 exon 81920176 81920222 81920176 ID=Msa1219150-mRNA-1:exon:29050;Parent=Msa1219150-mRNA-1
chr8_1 exon 81920383 81920595 81920383 ID=Msa1219150-mRNA-1:exon:29049;Parent=Msa1219150-mRNA-1
chr8_1 exon 81921978 81922174 81921978 ID=Msa1219150-mRNA-1:exon:29048;Parent=Msa1219150-mRNA-1
chr8_1 five_prime_UTR 81922066 81922174 81922066 ID=Msa1219150-mRNA-1:five_prime_utr;Parent=Msa1219150-mRNA-1
chr8_1 CDS 81921978 81922065 81921978 ID=Msa1219150-mRNA-1:cds;Parent=Msa1219150-mRNA-1
chr8_1 CDS 81920383 81920595 81920383 ID=Msa1219150-mRNA-1:cds;Parent=Msa1219150-mRNA-1
chr8_1 CDS 81920176 81920222 81920176 ID=Msa1219150-mRNA-1:cds;Parent=Msa1219150-mRNA-1
chr8_1 CDS 81919632 81919748 81919632 ID=Msa1219150-mRNA-1:cds;Parent=Msa1219150-mRNA-1
chr8_1 CDS 81919134 81919253 81919134 ID=Msa1219150-mRNA-1:cds;Parent=Msa1219150-mRNA-1
chr8_1 CDS 81918936 81919030 81918936 ID=Msa1219150-mRNA-1:cds;Parent=Msa1219150-mRNA-1
chr8_1 CDS 81918745 81918838 81918745 ID=Msa1219150-mRNA-1:cds;Parent=Msa1219150-mRNA-1
chr8_1 CDS 81918476 81918607 81918476 ID=Msa1219150-mRNA-1:cds;Parent=Msa1219150-mRNA-1
chr8_1 CDS 81917445 81917557 81917445 ID=Msa1219150-mRNA-1:cds;Parent=Msa1219150-mRNA-1
chr8_1 CDS 81916554 81916779 81916554 ID=Msa1219150-mRNA-1:cds;Parent=Msa1219150-mRNA-1
chr8_1 three_prime_UTR 81916356 81916553 81916356 ID=Msa1219150-mRNA-1:three_prime_utr;Parent=Msa1219150-mRNA-1
Gene Sequence

>Msa1219150

ATGGATCAAAGAGAGTTTGAAATTCAACCAAATTCCGATCCTAATCCATCAACAACTCATGTTTATCATCTTGCTCTCGATATTGGAGGATCTCTTAACAAATTAGTATACTTCACAAAAGATGAAGATCATTTTGTGGACGGTGAGGCGGAGATATCTCCTAGAAATACTTCAGAGAAATCCAAAGGCAGTAGGAGGAACCATCCTGTTCTTAAAGGAAAGCTCAATTTTAAGAAGTTTGAAACAAGCAAGATAAATGATTGTATAGATTTTATCAAGACCATGAAACTTCATCCTGGAGGTAGTCAGCAGCAAGAAAATCCCGGAAGTCAACCAATATCTATTAAGGCCACAGGTGGTGGTTCATACAAATATGCAGATCCCTTCAAAGAAAGGCTAGGGATAAATCTTGACAAGGAAGATGAAATGGATTGTCTTGTTGCAGGAGCAAATTTTCTTCTCGAGGTAGTCGACCGAGAAGCCTATACCTATATGGGTGATCAAAGGCAATTTGTGCAGATAGATCAAAATGATCTGTATCCATATCTTCTTGTTAATATTGGATCTGGTGTTAGCATGATCAAGGTGGAAGGAAATGGAAAGTTTGAGCGAGTTAGTGGAACGAGTATAGGTGGAGGCACTTTCTGGGGTTTAGGAAAGCTTTTAACTCAATGCAAGAGCTTTGATGAGTTGCTGGAATTAAGTTATCAGGGCAACAACAAAGAGGTAGATATGCTTGTCGGAGATATTTATGGTGGAATGGACTATGCAAAGATTGGTCTTTCATCTACTGCAATAGCATCTAGTTTTGGAAAGGCAATGTCTGATAAAAAGGAGCGAGAAGATTACAGACCCGAAGATATGGCTCGATCTCTTCTAAGAATGATTTCAAATAATATTGGACAGATCTCTTACTTAAATGCCCTTCGTTTTGGGCTGAAGAGGATATTTTTTGGTGGATTTTTTATTCAGAGGCATCCTTTTACAATGGATACACTATCTGTTGCTGTTAATTTCTGGTCTAAAGGTGAGGCGAAAGCAATGTTCTTGCGGCATGAAGGATTTCTTGGAGCTGTAGGTGCCTTCATGAGTTCTGATAAACATGGCCTCAAAGAATTATTGGTCAAGCAAGAGGCCCAACAAAGTCCTACCAAGTTAACTTTCGCTGTTGATAAGATGCATGGTCAACTAGATGGTGAATTGTTTGGTGATGAAAGTATTGAGTGTAGTGTGTATGCGGCTTAG

Protein sequence

>Msa1219150

MDQREFEIQPNSDPNPSTTHVYHLALDIGGSLNKLVYFTKDEDHFVDGEAEISPRNTSEKSKGSRRNHPVLKGKLNFKKFETSKINDCIDFIKTMKLHPGGSQQQENPGSQPISIKATGGGSYKYADPFKERLGINLDKEDEMDCLVAGANFLLEVVDREAYTYMGDQRQFVQIDQNDLYPYLLVNIGSGVSMIKVEGNGKFERVSGTSIGGGTFWGLGKLLTQCKSFDELLELSYQGNNKEVDMLVGDIYGGMDYAKIGLSSTAIASSFGKAMSDKKEREDYRPEDMARSLLRMISNNIGQISYLNALRFGLKRIFFGGFFIQRHPFTMDTLSVAVNFWSKGEAKAMFLRHEGFLGAVGAFMSSDKHGLKELLVKQEAQQSPTKLTFAVDKMHGQLDGELFGDESIECSVYAA*