Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0845000 | XP_024640958.1 | 77.723 | 202 | 31 | 1 | 1 | 188 | 28 | 229 | 6.61e-103 | 306 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0845000 | G7KB22 | 77.941 | 204 | 29 | 1 | 1 | 188 | 1 | 204 | 6.74e-102 | 301 |
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa0000550 | Msa0845000 | -0.822294 | 2.559016e-53 | -8.615850e-47 |
| Msa0006390 | Msa0845000 | 0.804148 | 2.481958e-49 | -8.615850e-47 |
| Msa0011720 | Msa0845000 | 0.809269 | 2.056407e-50 | -8.615850e-47 |
| Msa0048000 | Msa0845000 | 0.802248 | 6.139321e-49 | -8.615850e-47 |
| Msa0050380 | Msa0845000 | 0.827193 | 1.790570e-54 | -8.615850e-47 |
| Msa0063350 | Msa0845000 | -0.820860 | 5.487806e-53 | -8.615850e-47 |
| Msa0071910 | Msa0845000 | -0.830705 | 2.526636e-55 | -8.615850e-47 |
| Msa0090100 | Msa0845000 | 0.812579 | 3.948505e-51 | -8.615850e-47 |
| Msa0092990 | Msa0845000 | 0.842832 | 2.032696e-58 | -8.615850e-47 |
| Msa0111310 | Msa0845000 | 0.817411 | 3.343802e-52 | -8.615850e-47 |
| Msa0112750 | Msa0845000 | 0.804509 | 2.087895e-49 | -8.615850e-47 |
| Msa0607540 | Msa0845000 | 0.805740 | 1.153654e-49 | -8.615850e-47 |
| Msa0610590 | Msa0845000 | 0.803995 | 2.670689e-49 | -8.615850e-47 |
| Msa0621750 | Msa0845000 | -0.800655 | 1.301464e-48 | -8.615850e-47 |
| Msa0626090 | Msa0845000 | 0.852841 | 3.541882e-61 | -8.615850e-47 |
| Msa0638320 | Msa0845000 | 0.804239 | 2.376346e-49 | -8.615850e-47 |
| Msa0639820 | Msa0845000 | 0.806102 | 9.684244e-50 | -8.615850e-47 |
| Msa0647450 | Msa0845000 | -0.813928 | 1.997113e-51 | -8.615850e-47 |
| Msa0662650 | Msa0845000 | 0.842359 | 2.714056e-58 | -8.615850e-47 |
| Msa0669440 | Msa0845000 | 0.809679 | 1.679425e-50 | -8.615850e-47 |
| Msa0678820 | Msa0845000 | 0.801397 | 9.179356e-49 | -8.615850e-47 |
| Msa0696640 | Msa0845000 | 0.801888 | 7.278449e-49 | -8.615850e-47 |
| Msa0698930 | Msa0845000 | 0.837807 | 4.179579e-57 | -8.615850e-47 |
| Msa0708860 | Msa0845000 | 0.845905 | 3.032913e-59 | -8.615850e-47 |
| Msa0715720 | Msa0845000 | 0.834178 | 3.482158e-56 | -8.615850e-47 |
| Msa0722930 | Msa0845000 | 0.805017 | 1.635435e-49 | -8.615850e-47 |
| Msa0742390 | Msa0845000 | 0.809448 | 1.883185e-50 | -8.615850e-47 |
| Msa0756630 | Msa0845000 | -0.800063 | 1.718278e-48 | -8.615850e-47 |
| Msa0767080 | Msa0845000 | 0.841875 | 3.644206e-58 | -8.615850e-47 |
| Msa0767220 | Msa0845000 | 0.801954 | 7.056460e-49 | -8.615850e-47 |
| Msa0771720 | Msa0845000 | 0.812067 | 5.108945e-51 | -8.615850e-47 |
| Msa0773840 | Msa0845000 | 0.819876 | 9.223403e-53 | -8.615850e-47 |
| Msa0794510 | Msa0845000 | -0.821884 | 3.184957e-53 | -8.615850e-47 |
| Msa0802470 | Msa0845000 | -0.816200 | 6.252372e-52 | -8.615850e-47 |
| Msa0803890 | Msa0845000 | 0.802189 | 6.314183e-49 | -8.615850e-47 |
| Msa0806090 | Msa0845000 | 0.829442 | 5.136647e-55 | -8.615850e-47 |
| Msa0820850 | Msa0845000 | 0.812665 | 3.781185e-51 | -8.615850e-47 |
| Msa0828540 | Msa0845000 | 0.819717 | 1.003193e-52 | -8.615850e-47 |
| Msa0835730 | Msa0845000 | 0.801878 | 7.315668e-49 | -8.615850e-47 |
| Msa0839330 | Msa0845000 | 0.822857 | 1.892299e-53 | -8.615850e-47 |
| Msa0178350 | Msa0845000 | 0.832775 | 7.797031e-56 | -8.615850e-47 |
| Msa0178930 | Msa0845000 | 0.811355 | 7.297965e-51 | -8.615850e-47 |
| Msa0191630 | Msa0845000 | 0.838573 | 2.654388e-57 | -8.615850e-47 |
| Msa0208630 | Msa0845000 | 0.810914 | 9.095648e-51 | -8.615850e-47 |
| Msa0210450 | Msa0845000 | 0.806319 | 8.716122e-50 | -8.615850e-47 |
| Msa0215320 | Msa0845000 | -0.807221 | 5.619645e-50 | -8.615850e-47 |
| Msa0220580 | Msa0845000 | 0.834974 | 2.197535e-56 | -8.615850e-47 |
| Msa0220740 | Msa0845000 | 0.830373 | 3.046799e-55 | -8.615850e-47 |
| Msa0221060 | Msa0845000 | 0.807815 | 4.203689e-50 | -8.615850e-47 |
| Msa0223380 | Msa0845000 | 0.803395 | 3.557787e-49 | -8.615850e-47 |
| Msa0223410 | Msa0845000 | -0.834692 | 2.587972e-56 | -8.615850e-47 |
| Msa0365490 | Msa0845000 | 0.841781 | 3.858796e-58 | -8.615850e-47 |
| Msa0373930 | Msa0845000 | 0.828106 | 1.080984e-54 | -8.615850e-47 |
| Msa0376590 | Msa0845000 | 0.841833 | 3.737985e-58 | -8.615850e-47 |
| Msa0379640 | Msa0845000 | 0.814828 | 1.262803e-51 | -8.615850e-47 |
| Msa0389360 | Msa0845000 | 0.824856 | 6.434030e-54 | -8.615850e-47 |
| Msa0389810 | Msa0845000 | 0.823410 | 1.405813e-53 | -8.615850e-47 |
| Msa0394340 | Msa0845000 | 0.801423 | 9.068126e-49 | -8.615850e-47 |
| Msa0409200 | Msa0845000 | 0.806355 | 8.563989e-50 | -8.615850e-47 |
| Msa0442850 | Msa0845000 | 0.817243 | 3.649075e-52 | -8.615850e-47 |
| Msa0449760 | Msa0845000 | 0.826372 | 2.813264e-54 | -8.615850e-47 |
| Msa0449830 | Msa0845000 | 0.812090 | 5.049161e-51 | -8.615850e-47 |
| Msa0458440 | Msa0845000 | 0.857117 | 2.030022e-62 | -8.615850e-47 |
| Msa0464900 | Msa0845000 | 0.812614 | 3.880235e-51 | -8.615850e-47 |
| Msa0465670 | Msa0845000 | -0.809431 | 1.898484e-50 | -8.615850e-47 |
| Msa0465680 | Msa0845000 | -0.827080 | 1.906491e-54 | -8.615850e-47 |
| Msa0466390 | Msa0845000 | 0.847897 | 8.648081e-60 | -8.615850e-47 |
| Msa0468130 | Msa0845000 | 0.821688 | 3.534874e-53 | -8.615850e-47 |
| Msa0471800 | Msa0845000 | 0.826320 | 2.894893e-54 | -8.615850e-47 |
| Msa0473240 | Msa0845000 | 0.805921 | 1.056951e-49 | -8.615850e-47 |
| Msa0475490 | Msa0845000 | 0.811040 | 8.539763e-51 | -8.615850e-47 |
| Msa0482190 | Msa0845000 | -0.831476 | 1.633985e-55 | -8.615850e-47 |
| Msa0243710 | Msa0845000 | 0.813851 | 2.076519e-51 | -8.615850e-47 |
| Msa0250950 | Msa0845000 | 0.802960 | 4.377462e-49 | -8.615850e-47 |
| Msa0258760 | Msa0845000 | 0.830697 | 2.538368e-55 | -8.615850e-47 |
| Msa0260810 | Msa0845000 | 0.805322 | 1.411996e-49 | -8.615850e-47 |
| Msa0262510 | Msa0845000 | 0.807988 | 3.861540e-50 | -8.615850e-47 |
| Msa0269450 | Msa0845000 | 0.838485 | 2.797181e-57 | -8.615850e-47 |
| Msa0270220 | Msa0845000 | -0.813054 | 3.107799e-51 | -8.615850e-47 |
| Msa0270270 | Msa0845000 | 0.822792 | 1.959429e-53 | -8.615850e-47 |
| Msa0282250 | Msa0845000 | 0.818829 | 1.598206e-52 | -8.615850e-47 |
| Msa0294950 | Msa0845000 | 0.803708 | 3.064715e-49 | -8.615850e-47 |
| Msa0295640 | Msa0845000 | -0.822799 | 1.952165e-53 | -8.615850e-47 |
| Msa0306210 | Msa0845000 | -0.832542 | 8.909112e-56 | -8.615850e-47 |
| Msa0307830 | Msa0845000 | -0.824928 | 6.186064e-54 | -8.615850e-47 |
| Msa0309550 | Msa0845000 | 0.810337 | 1.212135e-50 | -8.615850e-47 |
| Msa0315290 | Msa0845000 | 0.805444 | 1.330751e-49 | -8.615850e-47 |
| Msa0323080 | Msa0845000 | 0.813518 | 2.458496e-51 | -8.615850e-47 |
| Msa0326670 | Msa0845000 | 0.816933 | 4.283885e-52 | -8.615850e-47 |
| Msa0328810 | Msa0845000 | 0.803571 | 3.271594e-49 | -8.615850e-47 |
| Msa0338110 | Msa0845000 | 0.820280 | 7.454095e-53 | -8.615850e-47 |
| Msa0340470 | Msa0845000 | 0.819687 | 1.019236e-52 | -8.615850e-47 |
| Msa0344830 | Msa0845000 | 0.833003 | 6.844050e-56 | -8.615850e-47 |
| Msa0344980 | Msa0845000 | 0.801852 | 7.403610e-49 | -8.615850e-47 |
| Msa0356960 | Msa0845000 | 0.824122 | 9.577366e-54 | -8.615850e-47 |
| Msa0484780 | Msa0845000 | 0.823362 | 1.442868e-53 | -8.615850e-47 |
| Msa0485500 | Msa0845000 | -0.828552 | 8.438741e-55 | -8.615850e-47 |
| Msa0498220 | Msa0845000 | 0.821980 | 3.025458e-53 | -8.615850e-47 |
| Msa0512900 | Msa0845000 | 0.814421 | 1.553973e-51 | -8.615850e-47 |
| Msa0516370 | Msa0845000 | 0.839848 | 1.239489e-57 | -8.615850e-47 |
| Msa0524890 | Msa0845000 | -0.828179 | 1.038056e-54 | -8.615850e-47 |
| Msa0536220 | Msa0845000 | 0.820889 | 5.404237e-53 | -8.615850e-47 |
| Msa0538600 | Msa0845000 | 0.811239 | 7.733644e-51 | -8.615850e-47 |
| Msa0540070 | Msa0845000 | 0.817016 | 4.103646e-52 | -8.615850e-47 |
| Msa0548280 | Msa0845000 | -0.864794 | 9.411628e-65 | -8.615850e-47 |
| Msa0553220 | Msa0845000 | -0.802103 | 6.575363e-49 | -8.615850e-47 |
| Msa0553460 | Msa0845000 | 0.802459 | 5.555565e-49 | -8.615850e-47 |
| Msa0558690 | Msa0845000 | 0.806244 | 9.035692e-50 | -8.615850e-47 |
| Msa0562440 | Msa0845000 | 0.811351 | 7.310472e-51 | -8.615850e-47 |
| Msa0564510 | Msa0845000 | 0.816442 | 5.517596e-52 | -8.615850e-47 |
| Msa0566500 | Msa0845000 | -0.804427 | 2.171181e-49 | -8.615850e-47 |
| Msa0578970 | Msa0845000 | 0.808537 | 2.949952e-50 | -8.615850e-47 |
| Msa0585000 | Msa0845000 | -0.831049 | 2.080013e-55 | -8.615850e-47 |
| Msa0843780 | Msa0845000 | -0.806943 | 6.434168e-50 | -8.615850e-47 |
| Msa0844900 | Msa0845000 | 0.924481 | 6.649653e-90 | -8.615850e-47 |
| Msa0845000 | Msa0853170 | 0.812667 | 3.778212e-51 | -8.615850e-47 |
| Msa0845000 | Msa0861130 | 0.804597 | 2.001703e-49 | -8.615850e-47 |
| Msa0845000 | Msa0876580 | 0.835945 | 1.248805e-56 | -8.615850e-47 |
| Msa0845000 | Msa0876850 | -0.824503 | 7.791052e-54 | -8.615850e-47 |
| Msa0845000 | Msa0882690 | 0.815219 | 1.033929e-51 | -8.615850e-47 |
| Msa0845000 | Msa0886330 | -0.810077 | 1.378723e-50 | -8.615850e-47 |
| Msa0845000 | Msa0896220 | 0.814316 | 1.639033e-51 | -8.615850e-47 |
| Msa0845000 | Msa0907070 | 0.811832 | 5.746747e-51 | -8.615850e-47 |
| Msa0845000 | Msa0908170 | 0.811177 | 7.976237e-51 | -8.615850e-47 |
| Msa0845000 | Msa0910980 | -0.827862 | 1.237722e-54 | -8.615850e-47 |
| Msa0845000 | Msa0924310 | 0.812518 | 4.071814e-51 | -8.615850e-47 |
| Msa0845000 | Msa0925290 | 0.809937 | 1.478151e-50 | -8.615850e-47 |
| Msa0845000 | Msa0927670 | 0.822635 | 2.131385e-53 | -8.615850e-47 |
| Msa0845000 | Msa0933230 | 0.800588 | 1.343300e-48 | -8.615850e-47 |
| Msa0845000 | Msa0961420 | -0.822666 | 2.096247e-53 | -8.615850e-47 |
| Msa0845000 | Msa0969520 | 0.806666 | 7.364384e-50 | -8.615850e-47 |
| Msa0845000 | Msa0982270 | 0.831496 | 1.615575e-55 | -8.615850e-47 |
| Msa0845000 | Msa0990960 | 0.805796 | 1.122592e-49 | -8.615850e-47 |
| Msa0845000 | Msa0992490 | -0.808924 | 2.438038e-50 | -8.615850e-47 |
| Msa0845000 | Msa0993290 | 0.801533 | 8.610869e-49 | -8.615850e-47 |
| Msa0845000 | Msa0999040 | 0.817162 | 3.805014e-52 | -8.615850e-47 |
| Msa0845000 | Msa0999960 | -0.804102 | 2.537226e-49 | -8.615850e-47 |
| Msa0845000 | Msa1015790 | 0.804560 | 2.036844e-49 | -8.615850e-47 |
| Msa0845000 | Msa1019840 | -0.834269 | 3.304353e-56 | -8.615850e-47 |
| Msa0845000 | Msa1039880 | 0.829231 | 5.780123e-55 | -8.615850e-47 |
| Msa0845000 | Msa1043390 | 0.814314 | 1.640879e-51 | -8.615850e-47 |
| Msa0845000 | Msa1043450 | 0.811188 | 7.931329e-51 | -8.615850e-47 |
| Msa0845000 | Msa1043510 | 0.823582 | 1.281882e-53 | -8.615850e-47 |
| Msa0845000 | Msa1046300 | 0.806765 | 7.018499e-50 | -8.615850e-47 |
| Msa0845000 | Msa1054410 | 0.811246 | 7.707914e-51 | -8.615850e-47 |
| Msa0845000 | Msa1059570 | 0.840072 | 1.083719e-57 | -8.615850e-47 |
| Msa0845000 | Msa1068200 | -0.835410 | 1.705947e-56 | -8.615850e-47 |
| Msa0845000 | Msa1073070 | -0.801379 | 9.255884e-49 | -8.615850e-47 |
| Msa0845000 | Msa1075080 | -0.827183 | 1.800383e-54 | -8.615850e-47 |
| Msa0845000 | Msa1075220 | -0.836922 | 7.042665e-57 | -8.615850e-47 |
| Msa0845000 | Msa1082500 | 0.820230 | 7.656365e-53 | -8.615850e-47 |
| Msa0845000 | Msa1084260 | 0.837417 | 5.261680e-57 | -8.615850e-47 |
| Msa0845000 | Msa1085920 | 0.804602 | 1.996736e-49 | -8.615850e-47 |
| Msa0845000 | Msa1090260 | 0.821205 | 4.569524e-53 | -8.615850e-47 |
| Msa0845000 | Msa1092090 | 0.805458 | 1.322254e-49 | -8.615850e-47 |
| Msa0845000 | Msa1104610 | 0.806158 | 9.424582e-50 | -8.615850e-47 |
| Msa0845000 | Msa1116690 | 0.836717 | 7.945383e-57 | -8.615850e-47 |
| Msa0845000 | Msa1124540 | -0.827606 | 1.425792e-54 | -8.615850e-47 |
| Msa0845000 | Msa1130270 | -0.828574 | 8.332995e-55 | -8.615850e-47 |
| Msa0845000 | Msa1131940 | -0.868352 | 6.962350e-66 | -8.615850e-47 |
| Msa0845000 | Msa1132970 | 0.806723 | 7.160527e-50 | -8.615850e-47 |
| Msa0845000 | Msa1137600 | 0.803110 | 4.076525e-49 | -8.615850e-47 |
| Msa0845000 | Msa1156340 | -0.818663 | 1.742748e-52 | -8.615850e-47 |
| Msa0845000 | Msa1162550 | -0.815948 | 7.117116e-52 | -8.615850e-47 |
| Msa0845000 | Msa1172670 | 0.821763 | 3.396789e-53 | -8.615850e-47 |
| Msa0845000 | Msa1195920 | 0.807090 | 5.990909e-50 | -8.615850e-47 |
| Msa0845000 | Msa1199560 | 0.813137 | 2.980967e-51 | -8.615850e-47 |
| Msa0845000 | Msa1205010 | -0.800548 | 1.368551e-48 | -8.615850e-47 |
| Msa0845000 | Msa1205130 | 0.815914 | 7.240941e-52 | -8.615850e-47 |
| Msa0845000 | Msa1214880 | 0.831097 | 2.024481e-55 | -8.615850e-47 |
| Msa0845000 | Msa1214890 | 0.805274 | 1.444971e-49 | -8.615850e-47 |
| Msa0845000 | Msa1217810 | 0.841423 | 4.794109e-58 | -8.615850e-47 |
| Msa0845000 | Msa1226510 | 0.804507 | 2.090039e-49 | -8.615850e-47 |
| Msa0845000 | Msa1233500 | 0.828521 | 8.582616e-55 | -8.615850e-47 |
| Msa0845000 | Msa1233890 | 0.821623 | 3.659299e-53 | -8.615850e-47 |
| Msa0845000 | Msa1252070 | 0.812215 | 4.743185e-51 | -8.615850e-47 |
| Msa0845000 | Msa1258380 | -0.831031 | 2.101597e-55 | -8.615850e-47 |
| Msa0845000 | Msa1261250 | 0.814826 | 1.264397e-51 | -8.615850e-47 |
| Msa0845000 | Msa1276440 | 0.810535 | 1.098213e-50 | -8.615850e-47 |
| Msa0845000 | Msa1278840 | 0.801080 | 1.066000e-48 | -8.615850e-47 |
| Msa0845000 | Msa1279210 | 0.809861 | 1.535031e-50 | -8.615850e-47 |
| Msa0845000 | Msa1280130 | 0.827723 | 1.336202e-54 | -8.615850e-47 |
| Msa0845000 | Msa1289010 | 0.804295 | 2.313337e-49 | -8.615850e-47 |
| Msa0845000 | Msa1291660 | 0.837181 | 6.047817e-57 | -8.615850e-47 |
| Msa0845000 | Msa1306750 | 0.805869 | 1.083925e-49 | -8.615850e-47 |
| Msa0845000 | Msa1307740 | 0.811671 | 6.231287e-51 | -8.615850e-47 |
| Msa0845000 | Msa1318990 | 0.805893 | 1.071444e-49 | -8.615850e-47 |
| Msa0845000 | Msa1322190 | 0.828947 | 6.772537e-55 | -8.615850e-47 |
| Msa0845000 | Msa1322860 | 0.804688 | 1.915799e-49 | -8.615850e-47 |
| Msa0845000 | Msa1322890 | 0.803542 | 3.316484e-49 | -8.615850e-47 |
| Msa0845000 | Msa1328700 | 0.813843 | 2.084495e-51 | -8.615850e-47 |
| Msa0845000 | Msa1331920 | 0.804421 | 2.177753e-49 | -8.615850e-47 |
| Msa0845000 | Msa1340650 | 0.820885 | 5.415068e-53 | -8.615850e-47 |
| Msa0845000 | Msa1357530 | 0.808997 | 2.351833e-50 | -8.615850e-47 |
| Msa0845000 | Msa1359040 | 0.815123 | 1.085922e-51 | -8.615850e-47 |
| Msa0845000 | Msa1362880 | 0.828801 | 7.345319e-55 | -8.615850e-47 |
| Msa0845000 | Msa1369530 | 0.828679 | 7.862143e-55 | -8.615850e-47 |
| Msa0845000 | Msa1372580 | 0.830628 | 2.638505e-55 | -8.615850e-47 |
| Msa0845000 | Msa1390050 | 0.805648 | 1.205871e-49 | -8.615850e-47 |
| Msa0845000 | Msa1393040 | 0.818787 | 1.633325e-52 | -8.615850e-47 |
| Msa0845000 | Msa1403580 | -0.801147 | 1.032709e-48 | -8.615850e-47 |
| Msa0845000 | Msa1411020 | 0.800550 | 1.367338e-48 | -8.615850e-47 |
| Msa0845000 | Msa1425010 | 0.805363 | 1.384120e-49 | -8.615850e-47 |
| Msa0845000 | Msa1430680 | 0.821355 | 4.219778e-53 | -8.615850e-47 |
| Msa0845000 | Msa1434350 | 0.801179 | 1.017204e-48 | -8.615850e-47 |
| Msa0845000 | Msa1439320 | 0.802638 | 5.101151e-49 | -8.615850e-47 |
| Msa0845000 | Msa1441190 | 0.810410 | 1.168524e-50 | -8.615850e-47 |
| Msa0845000 | Msa1443290 | -0.815986 | 6.977986e-52 | -8.615850e-47 |
| Msa0845000 | Msa1444250 | -0.830511 | 2.818547e-55 | -8.615850e-47 |
| Msa0845000 | Msa1445030 | 0.819183 | 1.327864e-52 | -8.615850e-47 |
| Msa0845000 | Msa1451620 | -0.845217 | 4.660528e-59 | -8.615850e-47 |
| Msa0845000 | Msa1458550 | 0.814139 | 1.794136e-51 | -8.615850e-47 |
| Msa0845000 | Msa1464940 | 0.802684 | 4.991272e-49 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0845000 | MtrunA17_Chr5g0416131 | 77.941 | 204 | 29 | 1 | 1 | 188 | 28 | 231 | 2.01e-105 | 302 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|
Find 52 sgRNAs with CRISPR-Local
Find 426 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| GATGACCAACTCGAAAATTT+TGG | 0.194813 | 5_4:-23620420 | None:intergenic |
| TTCGAGTTGGTCATCGTAAA+TGG | 0.222053 | 5_4:+23620428 | Msa0845000:CDS |
| GATACTCCTACACAGGTTTC+TGG | 0.225437 | 5_4:+23621934 | Msa0845000:intron |
| TTGAAAGGATCGATCAATTC+TGG | 0.265574 | 5_4:+23621355 | Msa0845000:CDS |
| TAGACTTGATGCCAGAAATA+AGG | 0.283087 | 5_4:+23625854 | Msa0845000:CDS |
| GAATCGGCATCTTCACCTTT+AGG | 0.294816 | 5_4:-23621385 | None:intergenic |
| AGACTTGATGCCAGAAATAA+GGG | 0.373397 | 5_4:+23625855 | Msa0845000:CDS |
| TGCTGATTCCGCTGATGCTC+AGG | 0.426663 | 5_4:+23625468 | Msa0845000:CDS |
| TTGGTCATCGTAAATGGAAT+AGG | 0.450217 | 5_4:+23620434 | Msa0845000:CDS |
| TGCTGATTCCACTGATGCTC+AGG | 0.460947 | 5_4:+23621115 | Msa0845000:CDS |
| GTCGCCATCCTTTACTGTTA+CGG | 0.466106 | 5_4:+23620535 | Msa0845000:CDS |
| TCTGGCATCAACTCATGTAC+AGG | 0.472467 | 5_4:-23623140 | None:intergenic |
| ATCAAGTCTATTCCATGCAC+AGG | 0.474232 | 5_4:-23625841 | None:intergenic |
| CAATGTTACCCGCCACCTAC+AGG | 0.475644 | 5_4:+23620567 | Msa0845000:CDS |
| TGCCGATTCCACTGATGCTC+AGG | 0.477881 | 5_4:+23621399 | Msa0845000:CDS |
| TGAAAGGATCGATCAATTCT+GGG | 0.483186 | 5_4:+23621356 | Msa0845000:CDS |
| ATTTCGAAGTGCTATTGCTA+TGG | 0.486080 | 5_4:+23621957 | Msa0845000:CDS |
| TACCTGAGCATCAGTGGAAT+CGG | 0.498451 | 5_4:-23621401 | None:intergenic |
| TGTCGCGCCATGACGATAAG+TGG | 0.509557 | 5_4:+23620395 | Msa0845000:exon |
| TTTCGAAGTGCTATTGCTAT+GGG | 0.511590 | 5_4:+23621958 | Msa0845000:CDS |
| GTTATTAAGCACCCTGTGCA+TGG | 0.516131 | 5_4:+23625829 | Msa0845000:CDS |
| TCGTTGTAGTTGCTGTTGAA+AGG | 0.524604 | 5_4:+23621340 | Msa0845000:intron |
| CTGTAGGTGGCGGGTAACAT+TGG | 0.525660 | 5_4:-23620566 | None:intergenic |
| TTTGGCTCCACTTATCGTCA+TGG | 0.540653 | 5_4:-23620402 | None:intergenic |
| GTAAGAACTTTGACCTCCAC+CGG | 0.553842 | 5_4:-23626491 | None:intergenic |
| ATTTGTTACCTGAGCATCAG+TGG | 0.553896 | 5_4:-23621407 | None:intergenic |
| CTGGCATCAACTCATGTACA+GGG | 0.558861 | 5_4:-23623139 | None:intergenic |
| AATTCTGGGGATCAACCTAA+AGG | 0.566615 | 5_4:+23621370 | Msa0845000:CDS |
| ATTTGTTACCTGAGCATCAG+TGG | 0.569263 | 5_4:-23621123 | None:intergenic |
| AGAATGTGCCGTAACAGTAA+AGG | 0.572863 | 5_4:-23620543 | None:intergenic |
| CACATGTACCTGTAGGTGGC+GGG | 0.575850 | 5_4:-23620575 | None:intergenic |
| AAGTCCGTGGATCAGGCTGA+GGG | 0.580724 | 5_4:+23621077 | Msa0845000:intron |
| ACACATGTACCTGTAGGTGG+CGG | 0.584747 | 5_4:-23620576 | None:intergenic |
| GAGAATATACTAGCCGGTGG+AGG | 0.596819 | 5_4:+23626478 | Msa0845000:CDS |
| CAATACAAATCATTCAAGAT+CGG | 0.599335 | 5_4:+23625807 | Msa0845000:CDS |
| AGCTCGACTATGTCCTCCAC+CGG | 0.602146 | 5_4:-23625440 | None:intergenic |
| CTGAAAGAGAATATACTAGC+CGG | 0.609117 | 5_4:+23626472 | Msa0845000:CDS |
| ACAAGGTACGGGTTTAAACT+CGG | 0.621278 | 5_4:+23620317 | None:intergenic |
| AGAAGACTACGAGCCGGTGG+AGG | 0.626897 | 5_4:+23625427 | Msa0845000:CDS |
| GTTGGTTACCTGAGCATCAG+CGG | 0.636301 | 5_4:-23625476 | None:intergenic |
| TCCGTGGATCAGGCTGAGGG+TGG | 0.641801 | 5_4:+23621080 | Msa0845000:intron |
| GAAAGAAGACTACGAGCCGG+TGG | 0.658227 | 5_4:+23625424 | Msa0845000:CDS |
| AAAGAGAATATACTAGCCGG+TGG | 0.660570 | 5_4:+23626475 | Msa0845000:CDS |
| GCTGAAAGAAGACTACGAGC+CGG | 0.663813 | 5_4:+23625421 | Msa0845000:CDS |
| ACTTGATGCCAGAAATAAGG+GGG | 0.668220 | 5_4:+23625857 | Msa0845000:CDS |
| ACAATGCAAATCATTCAACA+AGG | 0.669533 | 5_4:+23623105 | Msa0845000:CDS |
| TGTGCCGTAACAGTAAAGGA+TGG | 0.670732 | 5_4:-23620539 | None:intergenic |
| CATACACATGTACCTGTAGG+TGG | 0.678311 | 5_4:-23620579 | None:intergenic |
| GAAAGGATCGATCAATTCTG+GGG | 0.687692 | 5_4:+23621357 | Msa0845000:CDS |
| TCAAGTCTATTCCATGCACA+GGG | 0.692928 | 5_4:-23625840 | None:intergenic |
| GACTTGATGCCAGAAATAAG+GGG | 0.695172 | 5_4:+23625856 | Msa0845000:CDS |
| CAATGCAAATCATTCAACAA+GGG | 0.698122 | 5_4:+23623106 | Msa0845000:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !!! | GATTTTACTTTTTTAAATTT+GGG | + | chr5_4:23620727-23620746 | Msa0845000:intron | 10.0% |
| !!! | CTATTTTCAAATTTTTAATA+GGG | - | chr5_4:23622799-23622818 | None:intergenic | 10.0% |
| !!! | TACATATTATTTTAGTAAAA+GGG | - | chr5_4:23623006-23623025 | None:intergenic | 10.0% |
| !!! | ATACATATTATTTTAGTAAA+AGG | - | chr5_4:23623007-23623026 | None:intergenic | 10.0% |
| !! | TAATATCAATAGAATATATA+CGG | + | chr5_4:23624888-23624907 | Msa0845000:intron | 10.0% |
| !! | AACAAAAAATAAATTATACA+AGG | - | chr5_4:23625008-23625027 | None:intergenic | 10.0% |
| !!! | ATACAAAATTATATTTTGTT+TGG | + | chr5_4:23625235-23625254 | Msa0845000:intron | 10.0% |
| ! | GGGGGGGGGGGGGGGGGGGG+GGG | - | chr5_4:23625517-23625536 | None:intergenic | 100.0% |
| ! | GGGGGGGGGGGGGGGGGGGG+GGG | - | chr5_4:23625517-23625536 | None:intergenic | 100.0% |
| ! | GGGGGGGGGGGGGGGGGGGG+GGG | - | chr5_4:23625517-23625536 | None:intergenic | 100.0% |
| !!! | GGATTTTACTTTTTTAAATT+TGG | + | chr5_4:23620726-23620745 | Msa0845000:intron | 15.0% |
| !! | AAAATGTAATGTACTAATTT+AGG | - | chr5_4:23621266-23621285 | None:intergenic | 15.0% |
| !!! | TTTAAACTTTGTAATTTGTA+AGG | + | chr5_4:23621649-23621668 | Msa0845000:intron | 15.0% |
| !!! | TATTATTTTACAAGTTACTT+GGG | + | chr5_4:23621777-23621796 | Msa0845000:intron | 15.0% |
| !! | CATGTTTATAAATTGTAATA+TGG | - | chr5_4:23621878-23621897 | None:intergenic | 15.0% |
| !! | ATTACAATTTATAAACATGA+TGG | + | chr5_4:23621879-23621898 | Msa0845000:intron | 15.0% |
| !! | TTACAATTTATAAACATGAT+GGG | + | chr5_4:23621880-23621899 | Msa0845000:intron | 15.0% |
| !!! | TCATTTTCAATAGAATATTT+AGG | + | chr5_4:23622692-23622711 | Msa0845000:intron | 15.0% |
| !!! | GCTATTTTCAAATTTTTAAT+AGG | - | chr5_4:23622800-23622819 | None:intergenic | 15.0% |
| !!! | ATTAAATCAGTATTTTCTTT+AGG | - | chr5_4:23623071-23623090 | None:intergenic | 15.0% |
| !! | ATGAATATGCAAATTATATT+TGG | + | chr5_4:23623242-23623261 | Msa0845000:intron | 15.0% |
| !! | ATTGAAACAAAATATATCAA+AGG | - | chr5_4:23623936-23623955 | None:intergenic | 15.0% |
| !!! | TTTGTTATTATCAATTGAAT+GGG | - | chr5_4:23623967-23623986 | None:intergenic | 15.0% |
| !! | ATAAAATAACACAATTTATG+GGG | - | chr5_4:23626403-23626422 | None:intergenic | 15.0% |
| !! | CATAAAATAACACAATTTAT+GGG | - | chr5_4:23626404-23626423 | None:intergenic | 15.0% |
| !! | ACATAAAATAACACAATTTA+TGG | - | chr5_4:23626405-23626424 | None:intergenic | 15.0% |
| !!! | GTGTTTTGTTAGTAAAATTT+AGG | + | chr5_4:23620705-23620724 | Msa0845000:intron | 20.0% |
| !!! | CTTTTTTAAATTTGGGTTAT+TGG | + | chr5_4:23620734-23620753 | Msa0845000:intron | 20.0% |
| !!! | ACATTTTACTTCTCAATTAT+AGG | + | chr5_4:23621279-23621298 | Msa0845000:intron | 20.0% |
| !! | AAACTAAAAATCTGAATTTG+TGG | - | chr5_4:23621536-23621555 | None:intergenic | 20.0% |
| !!! | CAAGTAACTTGTAAAATAAT+AGG | - | chr5_4:23621778-23621797 | None:intergenic | 20.0% |
| !!! | CTATTATTTTACAAGTTACT+TGG | + | chr5_4:23621776-23621795 | Msa0845000:intron | 20.0% |
| !! | CTAGTATTTAATAATGAAGA+TGG | + | chr5_4:23622060-23622079 | Msa0845000:intron | 20.0% |
| !!! | AATAATGAAGATGGATATTT+TGG | + | chr5_4:23622069-23622088 | Msa0845000:intron | 20.0% |
| !! | AAGTATTATAGAATGTTAAC+AGG | + | chr5_4:23622148-23622167 | Msa0845000:intron | 20.0% |
| !! | TATATCAGTTAGTTATTTGT+TGG | - | chr5_4:23622315-23622334 | None:intergenic | 20.0% |
| !! | ATTATCTATGTTAAGATGAA+AGG | + | chr5_4:23622460-23622479 | Msa0845000:intron | 20.0% |
| !! | ACTAAAATAATATGTATGCA+CGG | + | chr5_4:23623010-23623029 | Msa0845000:intron | 20.0% |
| !!! | AAAATACTGATTTAATAGTC+TGG | + | chr5_4:23623075-23623094 | Msa0845000:intron | 20.0% |
| !! | CATAAACAAGAAATTATTAC+TGG | - | chr5_4:23623225-23623244 | None:intergenic | 20.0% |
| !!! | CTTTGTTATTATCAATTGAA+TGG | - | chr5_4:23623968-23623987 | None:intergenic | 20.0% |
| !! | AATGAAGTAAACAAAAAAGT+TGG | - | chr5_4:23624977-23624996 | None:intergenic | 20.0% |
| !!! | ATCACATCAATATTTTCTTT+AGG | - | chr5_4:23625085-23625104 | None:intergenic | 20.0% |
| !!! | GAATGTAACTATTATTGATT+CGG | + | chr5_4:23625314-23625333 | Msa0845000:intron | 20.0% |
| !! | GCTTTCTGATAATAAAATAT+GGG | - | chr5_4:23625403-23625422 | None:intergenic | 20.0% |
| !! | AGCTTTCTGATAATAAAATA+TGG | - | chr5_4:23625404-23625423 | None:intergenic | 20.0% |
| !!! | AATATACTGATTTTATAGTC+TGG | + | chr5_4:23625776-23625795 | Msa0845000:intron | 20.0% |
| !!! | CAAATATAATTTGCATATTC+AGG | - | chr5_4:23623244-23623263 | None:intergenic | 20.0% |
| !! | CTGAATATGCAAATTATATT+TGG | + | chr5_4:23625949-23625968 | Msa0845000:intron | 20.0% |
| !! | TATGCAAATTATATTTGGTT+TGG | + | chr5_4:23623247-23623266 | Msa0845000:intron | 20.0% |
| !!! | ATTTACAGAACTTGTTTTTT+TGG | - | chr5_4:23626248-23626267 | None:intergenic | 20.0% |
| !! | TAAAATAACACAATTTATGG+GGG | - | chr5_4:23626402-23626421 | None:intergenic | 20.0% |
| !! | TGATCATAACATAGAAATAT+AGG | - | chr5_4:23626448-23626467 | None:intergenic | 20.0% |
| !! | ATGATGGTGATTGTTAATTA+AGG | + | chr5_4:23620632-23620651 | Msa0845000:intron | 25.0% |
| !! | TGATGGTGATTGTTAATTAA+GGG | + | chr5_4:23620633-23620652 | Msa0845000:intron | 25.0% |
| !!! | AATTTCAAGTTGTAAAACCT+TGG | - | chr5_4:23620781-23620800 | None:intergenic | 25.0% |
| !! | TTTACTATTCGAGTTTACTT+AGG | - | chr5_4:23620822-23620841 | None:intergenic | 25.0% |
| ! | TAAACTCGAATAGTAAACAT+CGG | + | chr5_4:23620825-23620844 | Msa0845000:intron | 25.0% |
| ! | TTCATCTCATTCTATGTATT+TGG | + | chr5_4:23621192-23621211 | Msa0845000:intron | 25.0% |
| ! | TACAAGGTAGAAAGAATAAA+TGG | - | chr5_4:23621507-23621526 | None:intergenic | 25.0% |
| !! | TGTGATTTGATTTAAAGGAT+TGG | - | chr5_4:23621597-23621616 | None:intergenic | 25.0% |
| !! | TTCTCTGTGATTTGATTTAA+AGG | - | chr5_4:23621602-23621621 | None:intergenic | 25.0% |
| !!! | TTTTACTGCTTTATTCATTG+AGG | + | chr5_4:23621706-23621725 | Msa0845000:intron | 25.0% |
| !! | AATTTATAAACATGATGGGA+AGG | + | chr5_4:23621884-23621903 | Msa0845000:intron | 25.0% |
| ! | AAGTACTTATACTATGATAC+AGG | - | chr5_4:23622489-23622508 | None:intergenic | 25.0% |
| ! | TGTATCATAGTATAAGTACT+TGG | + | chr5_4:23622488-23622507 | Msa0845000:intron | 25.0% |
| ! | GTATCATAGTATAAGTACTT+GGG | + | chr5_4:23622489-23622508 | Msa0845000:intron | 25.0% |
| ! | CAACTGTAACTAATTGATTA+TGG | - | chr5_4:23622600-23622619 | None:intergenic | 25.0% |
| ! | CATAATCAATTAGTTACAGT+TGG | + | chr5_4:23622598-23622617 | Msa0845000:intron | 25.0% |
| ! | AGTGATTAACTATCTAACTA+GGG | - | chr5_4:23622633-23622652 | None:intergenic | 25.0% |
| ! | TAGTGATTAACTATCTAACT+AGG | - | chr5_4:23622634-23622653 | None:intergenic | 25.0% |
| ! | AATTTGAGAGAAAATTGAGT+TGG | - | chr5_4:23622723-23622742 | None:intergenic | 25.0% |
| ! | TTACACATTGAATTACAACA+TGG | + | chr5_4:23622877-23622896 | Msa0845000:intron | 25.0% |
| ! | AAACAACAGATAATGAATGA+TGG | - | chr5_4:23623274-23623293 | None:intergenic | 25.0% |
| !! | ATTCATTATCTGTTGTTTGT+TGG | + | chr5_4:23623276-23623295 | Msa0845000:intron | 25.0% |
| ! | AAGTACTATAGAATATGAAC+AGG | + | chr5_4:23623438-23623457 | Msa0845000:intron | 25.0% |
| ! | TAGTTGGATTCTGTTATAAA+AGG | - | chr5_4:23623585-23623604 | None:intergenic | 25.0% |
| ! | GTTAGTACTTAATAGTTAGT+TGG | - | chr5_4:23623601-23623620 | None:intergenic | 25.0% |
| ! | CTAACCAATGTTTAAAAAAC+CGG | + | chr5_4:23623681-23623700 | Msa0845000:intron | 25.0% |
| ! | TATCAATTGAATGGGATAAT+AGG | - | chr5_4:23623959-23623978 | None:intergenic | 25.0% |
| !!! | ATAGAAAGTATTCCCAAAAT+CGG | - | chr5_4:23624074-23624093 | None:intergenic | 25.0% |
| ! | TACTTTCTATACCAAAAGAA+AGG | + | chr5_4:23624084-23624103 | Msa0845000:intron | 25.0% |
| ! | TACTTAGTTTCTGAATCATT+TGG | - | chr5_4:23624335-23624354 | None:intergenic | 25.0% |
| ! | GACATAAAAAATTTAAGTGC+TGG | + | chr5_4:23625028-23625047 | Msa0845000:intron | 25.0% |
| ! | AAAATATTGATGTGATAGTC+CGG | + | chr5_4:23625089-23625108 | Msa0845000:intron | 25.0% |
| ! | ACATATCATAGAACATCTTT+AGG | + | chr5_4:23625114-23625133 | Msa0845000:intron | 25.0% |
| ! | CATATCATAGAACATCTTTA+GGG | + | chr5_4:23625115-23625134 | Msa0845000:intron | 25.0% |
| !! | TTTGTCATCCTTTAAAAACA+TGG | + | chr5_4:23625201-23625220 | Msa0845000:intron | 25.0% |
| !!! | CAACAATACCATGTTTTTAA+AGG | - | chr5_4:23625212-23625231 | None:intergenic | 25.0% |
| ! | TACATTCTTTAAGCTCATAA+AGG | - | chr5_4:23625301-23625320 | None:intergenic | 25.0% |
| ! | AAATCAGTATATTCTTTACG+AGG | - | chr5_4:23625769-23625788 | None:intergenic | 25.0% |
| ! | CAATACAAATCATTCAAGAT+CGG | + | chr5_4:23625807-23625826 | Msa0845000:CDS | 25.0% |
| ! | CAGGAACAACAAATTATTAT+TGG | - | chr5_4:23625932-23625951 | None:intergenic | 25.0% |
| ! | TGAAAATTAAAAATCATGCC+AGG | - | chr5_4:23626121-23626140 | None:intergenic | 25.0% |
| ! | ACGGAATTTATATTGAAAAC+AGG | - | chr5_4:23626214-23626233 | None:intergenic | 25.0% |
| ! | GATGGTTAACTATCTAAATA+TGG | - | chr5_4:23626326-23626345 | None:intergenic | 25.0% |
| !! | CAAGTTTAATTTGTGCATGA+TGG | + | chr5_4:23620616-23620635 | Msa0845000:intron | 30.0% |
| AACACATAAACGACTTAGAT+AGG | - | chr5_4:23620690-23620709 | None:intergenic | 30.0% | |
| TACTTAGGTAAAACTAGTTC+AGG | - | chr5_4:23620807-23620826 | None:intergenic | 30.0% | |
| ! | TTTACTGAGGTTGATTAACT+CGG | + | chr5_4:23620872-23620891 | Msa0845000:intron | 30.0% |
| GCATGTAAAAACGTAAACTT+GGG | + | chr5_4:23620960-23620979 | Msa0845000:intron | 30.0% | |
| TGAGTTAAACACTCAATTTG+TGG | + | chr5_4:23620991-23621010 | Msa0845000:intron | 30.0% | |
| TGCTCAGGTAACAAATAAAA+CGG | + | chr5_4:23621130-23621149 | Msa0845000:intron | 30.0% | |
| AAGACAGAAACGAGTTATTT+AGG | - | chr5_4:23621238-23621257 | None:intergenic | 30.0% | |
| ! | ACTTTGTAATTTGTAAGGCT+TGG | + | chr5_4:23621654-23621673 | Msa0845000:intron | 30.0% |
| GCAACAAAAAGTGAATAGAT+TGG | + | chr5_4:23621987-23622006 | Msa0845000:CDS | 30.0% | |
| ! | TTTGCTGGTTAATTGTTAAC+AGG | + | chr5_4:23622028-23622047 | Msa0845000:intron | 30.0% |
| ! | TTGCTGGTTAATTGTTAACA+GGG | + | chr5_4:23622029-23622048 | Msa0845000:intron | 30.0% |
| !!! | AAGATGGATATTTTGGAGTT+TGG | + | chr5_4:23622076-23622095 | Msa0845000:intron | 30.0% |
| CTGATATAGAAGTTAGTTAG+TGG | - | chr5_4:23622289-23622308 | None:intergenic | 30.0% | |
| ! | CTGTATTAATTTTTCGTACG+TGG | + | chr5_4:23622541-23622560 | Msa0845000:intron | 30.0% |
| ATCAATTAGTTACAGTTGGA+TGG | + | chr5_4:23622602-23622621 | Msa0845000:intron | 30.0% | |
| ! | TAACATTGATGACTCAGATA+TGG | - | chr5_4:23622660-23622679 | None:intergenic | 30.0% |
| AAATAATATGTATGCACGGA+AGG | + | chr5_4:23623014-23623033 | Msa0845000:intron | 30.0% | |
| TGATTTAATAGTCTGGTTAC+AGG | + | chr5_4:23623082-23623101 | Msa0845000:intron | 30.0% | |
| ACAATGCAAATCATTCAACA+AGG | + | chr5_4:23623105-23623124 | Msa0845000:CDS | 30.0% | |
| CAATGCAAATCATTCAACAA+GGG | + | chr5_4:23623106-23623125 | Msa0845000:CDS | 30.0% | |
| GTTCTTGTGAATTAATCAAG+AGG | - | chr5_4:23623315-23623334 | None:intergenic | 30.0% | |
| ! | ACGAAGAATATTTTGTAGTC+TGG | + | chr5_4:23623365-23623384 | Msa0845000:intron | 30.0% |
| TCTGTTATAAAAGGTAGTAC+TGG | - | chr5_4:23623576-23623595 | None:intergenic | 30.0% | |
| !!! | CGGTTTTTTAAACATTGGTT+AGG | - | chr5_4:23623683-23623702 | None:intergenic | 30.0% |
| !!! | TGTTCCGGTTTTTTAAACAT+TGG | - | chr5_4:23623688-23623707 | None:intergenic | 30.0% |
| ! | ACGGTTTAAACCAGTTTTTA+CGG | - | chr5_4:23623803-23623822 | None:intergenic | 30.0% |
| !! | TAGAAAGTATTCCCAAAATC+GGG | - | chr5_4:23624073-23624092 | None:intergenic | 30.0% |
| ! | AGTGTTATGAACCTTTCTTT+TGG | - | chr5_4:23624098-23624117 | None:intergenic | 30.0% |
| ! | CAGCAATGTAATGTGAATTT+TGG | + | chr5_4:23624203-23624222 | Msa0845000:intron | 30.0% |
| AAGTTCAAAGAAATTCCACA+CGG | + | chr5_4:23624233-23624252 | Msa0845000:intron | 30.0% | |
| AATATACATTTGCAGCCTAA+TGG | - | chr5_4:23624297-23624316 | None:intergenic | 30.0% | |
| TGATTCAGAAACTAAGTACA+AGG | + | chr5_4:23624337-23624356 | Msa0845000:intron | 30.0% | |
| ATTTGACAAAACTCTGATTG+TGG | - | chr5_4:23624599-23624618 | None:intergenic | 30.0% | |
| TACGAGTTTGTGAAATTTGT+AGG | + | chr5_4:23624676-23624695 | Msa0845000:intron | 30.0% | |
| CAAGATGGTCAATTAGTTAA+AGG | - | chr5_4:23624782-23624801 | None:intergenic | 30.0% | |
| CTATGATGGTTAACTATCTA+TGG | - | chr5_4:23624830-23624849 | None:intergenic | 30.0% | |
| CAATAGAATATATACGGAGT+CGG | + | chr5_4:23624894-23624913 | Msa0845000:intron | 30.0% | |
| !! | AAAAATTTAAGTGCTGGTCT+TGG | + | chr5_4:23625034-23625053 | Msa0845000:intron | 30.0% |
| !! | AAAATTTAAGTGCTGGTCTT+GGG | + | chr5_4:23625035-23625054 | Msa0845000:intron | 30.0% |
| GATGTTCTATGATATGTATC+CGG | - | chr5_4:23625111-23625130 | None:intergenic | 30.0% | |
| !!! | TTTAGGGTTTTGTTTGTACA+TGG | + | chr5_4:23625131-23625150 | Msa0845000:intron | 30.0% |
| !!! | GTTTTGTTTGTACATGGAAA+AGG | + | chr5_4:23625137-23625156 | Msa0845000:intron | 30.0% |
| TTATAATGCGATGGAATCAA+AGG | - | chr5_4:23625659-23625678 | None:intergenic | 30.0% | |
| ! | TGATTTTATAGTCTGGTTAC+AGG | + | chr5_4:23625783-23625802 | Msa0845000:intron | 30.0% |
| ! | CTTCTTTTAATGTTGCATGA+TGG | + | chr5_4:23626088-23626107 | Msa0845000:intron | 30.0% |
| ! | TTGAAATATCAATCTAGCTC+TGG | + | chr5_4:23626159-23626178 | Msa0845000:intron | 30.0% |
| !!! | TTTTTTGGTGCTCACATTTA+CGG | - | chr5_4:23626233-23626252 | None:intergenic | 30.0% |
| ! | GATGACCAACTCGAAAATTT+TGG | - | chr5_4:23620423-23620442 | None:intergenic | 35.0% |
| TTGGTCATCGTAAATGGAAT+AGG | + | chr5_4:23620434-23620453 | Msa0845000:CDS | 35.0% | |
| AAACATACACATGTACCTGT+AGG | - | chr5_4:23620585-23620604 | None:intergenic | 35.0% | |
| TGATTCTAAACTCTTGACCA+AGG | + | chr5_4:23620761-23620780 | Msa0845000:intron | 35.0% | |
| ! | TGTTAACTTGGAGGTAAACT+TGG | - | chr5_4:23620932-23620951 | None:intergenic | 35.0% |
| ATGCCAAAAACGTGTTAACT+TGG | - | chr5_4:23620944-23620963 | None:intergenic | 35.0% | |
| GGCATGTAAAAACGTAAACT+TGG | + | chr5_4:23620959-23620978 | Msa0845000:intron | 35.0% | |
| CAGCGCGAAATTAATATAAC+AGG | - | chr5_4:23621033-23621052 | None:intergenic | 35.0% | |
| AAACGGTTTAATGCTTACAG+AGG | + | chr5_4:23621147-23621166 | Msa0845000:intron | 35.0% | |
| TTGAAAGGATCGATCAATTC+TGG | + | chr5_4:23621355-23621374 | Msa0845000:CDS | 35.0% | |
| TGAAAGGATCGATCAATTCT+GGG | + | chr5_4:23621356-23621375 | Msa0845000:CDS | 35.0% | |
| GGTAGAAAGAATAAATGGCA+AGG | - | chr5_4:23621502-23621521 | None:intergenic | 35.0% | |
| GAATTTGTGGACAAGTTACA+AGG | - | chr5_4:23621523-23621542 | None:intergenic | 35.0% | |
| TGGACGTCAGTTATACAAAA+AGG | - | chr5_4:23621577-23621596 | None:intergenic | 35.0% | |
| CACTTTCAATTCCATTATCC+AGG | - | chr5_4:23621842-23621861 | None:intergenic | 35.0% | |
| GAAGAAATCTGTGGTTAACA+TGG | + | chr5_4:23621910-23621929 | Msa0845000:intron | 35.0% | |
| ! | ATTTCGAAGTGCTATTGCTA+TGG | + | chr5_4:23621957-23621976 | Msa0845000:CDS | 35.0% |
| ! | TTTCGAAGTGCTATTGCTAT+GGG | + | chr5_4:23621958-23621977 | Msa0845000:CDS | 35.0% |
| AAGACAATGAGAGAGAAAAC+AGG | + | chr5_4:23622190-23622209 | Msa0845000:intron | 35.0% | |
| AGACAATGAGAGAGAAAACA+GGG | + | chr5_4:23622191-23622210 | Msa0845000:intron | 35.0% | |
| AACTGATATAATTGCTGCAG+TGG | + | chr5_4:23622325-23622344 | Msa0845000:intron | 35.0% | |
| AGTTTGTGCTCATGACATTA+AGG | + | chr5_4:23622378-23622397 | Msa0845000:intron | 35.0% | |
| AGAACGACTGAGATAGAAAA+AGG | - | chr5_4:23622430-23622449 | None:intergenic | 35.0% | |
| CTATGTGGCTTATTGAGTAT+CGG | - | chr5_4:23622749-23622768 | None:intergenic | 35.0% | |
| CTCAATAAGCCACATAGATT+TGG | + | chr5_4:23622752-23622771 | Msa0845000:intron | 35.0% | |
| TACCTACTTCCAAATCTATG+TGG | - | chr5_4:23622764-23622783 | None:intergenic | 35.0% | |
| TGTATGTGCAATACACCAAA+TGG | + | chr5_4:23622928-23622947 | Msa0845000:intron | 35.0% | |
| !! | ATTTTAGTAAAAGGGCAACC+CGG | - | chr5_4:23622998-23623017 | None:intergenic | 35.0% |
| !! | GGAAGGTTTTGGTATGAAAA+TGG | + | chr5_4:23623031-23623050 | Msa0845000:intron | 35.0% |
| !! | ATGAGTTGATGCCAGAAAAA+AGG | + | chr5_4:23623147-23623166 | Msa0845000:CDS | 35.0% |
| !! | TGAGTTGATGCCAGAAAAAA+GGG | + | chr5_4:23623148-23623167 | Msa0845000:CDS | 35.0% |
| ! | TGTATTTTCCCCCTTTTTTC+TGG | - | chr5_4:23623161-23623180 | None:intergenic | 35.0% |
| AGAAAAAAGGGGGAAAATAC+AGG | + | chr5_4:23623160-23623179 | Msa0845000:CDS | 35.0% | |
| ! | TTATCTGTTGTTTGTTGGTG+TGG | + | chr5_4:23623281-23623300 | Msa0845000:intron | 35.0% |
| ! | TATCTGTTGTTTGTTGGTGT+GGG | + | chr5_4:23623282-23623301 | Msa0845000:intron | 35.0% |
| AGCAATGAGAAAAGAAACAG+AGG | + | chr5_4:23623494-23623513 | Msa0845000:intron | 35.0% | |
| TAACTGTATAAATGCTGCAG+TGG | + | chr5_4:23623617-23623636 | Msa0845000:intron | 35.0% | |
| ACTGTGCCTAGTATATTAAG+CGG | + | chr5_4:23623652-23623671 | Msa0845000:intron | 35.0% | |
| TTTAAAAAACCGGAACAGAC+CGG | + | chr5_4:23623691-23623710 | Msa0845000:intron | 35.0% | |
| AAACAGGTAGTCAGTTAAAC+CGG | + | chr5_4:23623770-23623789 | Msa0845000:intron | 35.0% | |
| ! | CGGTTTAAACCAGTTTTTAC+GGG | - | chr5_4:23623802-23623821 | None:intergenic | 35.0% |
| AGACAATGCTCTAGTATGAA+AGG | + | chr5_4:23623857-23623876 | Msa0845000:intron | 35.0% | |
| TGTGAGTAAGAAGAAGAGAA+TGG | - | chr5_4:23624133-23624152 | None:intergenic | 35.0% | |
| TTCTCTTCTTCTTACTCACA+TGG | + | chr5_4:23624133-23624152 | Msa0845000:intron | 35.0% | |
| AGTTCAAAGAAATTCCACAC+GGG | + | chr5_4:23624234-23624253 | Msa0845000:intron | 35.0% | |
| AAGAAATCACATACTGAGCT+TGG | - | chr5_4:23624461-23624480 | None:intergenic | 35.0% | |
| CTCAGATATGGTAACTATGA+TGG | - | chr5_4:23624844-23624863 | None:intergenic | 35.0% | |
| TTTCGTGTCCTCCATAAAAT+CGG | + | chr5_4:23624929-23624948 | Msa0845000:intron | 35.0% | |
| CTGGTAAATTTAATCTCCAC+AGG | - | chr5_4:23625169-23625188 | None:intergenic | 35.0% | |
| GTGGAGATTAAATTTACCAG+CGG | + | chr5_4:23625169-23625188 | Msa0845000:intron | 35.0% | |
| !!! | TTGGACGATCATTCCTTTTT+TGG | + | chr5_4:23625254-23625273 | Msa0845000:intron | 35.0% |
| !!! | TCATTCCTTTTTTGGTGTGT+TGG | + | chr5_4:23625262-23625281 | Msa0845000:intron | 35.0% |
| TTGACACTTAATCAACCAGT+TGG | - | chr5_4:23625497-23625516 | None:intergenic | 35.0% | |
| AATTCATAGCTGAACAAAGC+TGG | - | chr5_4:23625615-23625634 | None:intergenic | 35.0% | |
| TAGACTTGATGCCAGAAATA+AGG | + | chr5_4:23625854-23625873 | Msa0845000:CDS | 35.0% | |
| AGACTTGATGCCAGAAATAA+GGG | + | chr5_4:23625855-23625874 | Msa0845000:CDS | 35.0% | |
| !! | TGTATTTTCCCCCTTATTTC+TGG | - | chr5_4:23625868-23625887 | None:intergenic | 35.0% |
| AGAAATAAGGGGGAAAATAC+AGG | + | chr5_4:23625867-23625886 | Msa0845000:CDS | 35.0% | |
| CTCAGATATGGTAACTATGA+TGG | - | chr5_4:23624844-23624863 | None:intergenic | 35.0% | |
| CTGAAAGAGAATATACTAGC+CGG | + | chr5_4:23626472-23626491 | Msa0845000:CDS | 35.0% | |
| !!! | TGGAGCCAAAATTTTCGAGT+TGG | + | chr5_4:23620415-23620434 | Msa0845000:CDS | 40.0% |
| !! | TTCGAGTTGGTCATCGTAAA+TGG | + | chr5_4:23620428-23620447 | Msa0845000:CDS | 40.0% |
| AGAATGTGCCGTAACAGTAA+AGG | - | chr5_4:23620546-23620565 | None:intergenic | 40.0% | |
| AAACTCGTACGAGTTTACTG+AGG | + | chr5_4:23620859-23620878 | Msa0845000:intron | 40.0% | |
| ! | TTGGAGGTAAACTTGGTTTG+TGG | - | chr5_4:23620925-23620944 | None:intergenic | 40.0% |
| ! | CCAAAAACGTGTTAACTTGG+AGG | - | chr5_4:23620941-23620960 | None:intergenic | 40.0% |
| ! | CCTCCAAGTTAACACGTTTT+TGG | + | chr5_4:23620938-23620957 | Msa0845000:intron | 40.0% |
| ! | ATTTGTTACCTGAGCATCAG+TGG | - | chr5_4:23621126-23621145 | None:intergenic | 40.0% |
| ! | TCGTTGTAGTTGCTGTTGAA+AGG | + | chr5_4:23621340-23621359 | Msa0845000:intron | 40.0% |
| GAAAGGATCGATCAATTCTG+GGG | + | chr5_4:23621357-23621376 | Msa0845000:CDS | 40.0% | |
| ! | AATTCTGGGGATCAACCTAA+AGG | + | chr5_4:23621370-23621389 | Msa0845000:CDS | 40.0% |
| ! | ATTTGTTACCTGAGCATCAG+TGG | - | chr5_4:23621126-23621145 | None:intergenic | 40.0% |
| TCAATTCCATTATCCAGGAC+AGG | - | chr5_4:23621837-23621856 | None:intergenic | 40.0% | |
| GGAAGGAAAGAAGAAATCTG+TGG | + | chr5_4:23621901-23621920 | Msa0845000:intron | 40.0% | |
| !! | GTTTTGTTGCATGCATTTGC+TGG | + | chr5_4:23622013-23622032 | Msa0845000:intron | 40.0% |
| GACAATGAGAGAGAAAACAG+GGG | + | chr5_4:23622192-23622211 | Msa0845000:intron | 40.0% | |
| CTTGGGTTTACTGAATCTAC+CGG | + | chr5_4:23622506-23622525 | Msa0845000:intron | 40.0% | |
| AGCCACATAGATTTGGAAGT+AGG | + | chr5_4:23622759-23622778 | Msa0845000:intron | 40.0% | |
| ATGTGCAATACACCAAATGG+TGG | + | chr5_4:23622931-23622950 | Msa0845000:intron | 40.0% | |
| TGTGCAATACACCAAATGGT+GGG | + | chr5_4:23622932-23622951 | Msa0845000:intron | 40.0% | |
| ! | TATGTATGCACGGAAGGTTT+TGG | + | chr5_4:23623020-23623039 | Msa0845000:intron | 40.0% |
| !! | GAGTTGATGCCAGAAAAAAG+GGG | + | chr5_4:23623149-23623168 | Msa0845000:CDS | 40.0% |
| ! | AGTTGATGCCAGAAAAAAGG+GGG | + | chr5_4:23623150-23623169 | Msa0845000:CDS | 40.0% |
| CTGTGCCTAGTATATTAAGC+GGG | + | chr5_4:23623653-23623672 | Msa0845000:intron | 40.0% | |
| GAGTACCCGCTTAATATACT+AGG | - | chr5_4:23623661-23623680 | None:intergenic | 40.0% | |
| TTAAACAATCCGGTCTGTTC+CGG | - | chr5_4:23623703-23623722 | None:intergenic | 40.0% | |
| AACAGACCGGATTGTTTAAC+CGG | + | chr5_4:23623704-23623723 | Msa0845000:intron | 40.0% | |
| ! | ACCTGTTTTGTACAGATGTC+CGG | - | chr5_4:23623758-23623777 | None:intergenic | 40.0% |
| !! | CAGTTTTTACGGGCTTTTTC+CGG | - | chr5_4:23623792-23623811 | None:intergenic | 40.0% |
| ATGAAAGGAGAATGCTCCTT+TGG | + | chr5_4:23623872-23623891 | Msa0845000:intron | 40.0% | |
| TGAAAGGAGAATGCTCCTTT+GGG | + | chr5_4:23623873-23623892 | Msa0845000:intron | 40.0% | |
| AAGATGATACCTTGCACACA+AGG | - | chr5_4:23623904-23623923 | None:intergenic | 40.0% | |
| ! | TATCCATTTCAGCCCGATTT+TGG | + | chr5_4:23624058-23624077 | Msa0845000:intron | 40.0% |
| ! | ATCCATTTCAGCCCGATTTT+GGG | + | chr5_4:23624059-23624078 | Msa0845000:intron | 40.0% |
| AGAAGAGAATGGATGTGCAT+TGG | - | chr5_4:23624122-23624141 | None:intergenic | 40.0% | |
| ! | GGTTTGCTTGGTGGTTTATT+AGG | - | chr5_4:23624161-23624180 | None:intergenic | 40.0% |
| ATAAACCACCAAGCAAACCT+TGG | + | chr5_4:23624162-23624181 | Msa0845000:intron | 40.0% | |
| TAATGGTACCTGTTTAGAGG+GGG | - | chr5_4:23624280-23624299 | None:intergenic | 40.0% | |
| CTAATGGTACCTGTTTAGAG+GGG | - | chr5_4:23624281-23624300 | None:intergenic | 40.0% | |
| CCTAATGGTACCTGTTTAGA+GGG | - | chr5_4:23624282-23624301 | None:intergenic | 40.0% | |
| CAATTATTCTGCTACTGCCT+TGG | + | chr5_4:23624428-23624447 | Msa0845000:intron | 40.0% | |
| AGTCACCAGATATGAGCTTT+GGG | + | chr5_4:23624494-23624513 | Msa0845000:intron | 40.0% | |
| CAATAGTGACGACTCAGATA+TGG | - | chr5_4:23624856-23624875 | None:intergenic | 40.0% | |
| ! | ATGGAAAAGGCTTTAACCTG+TGG | + | chr5_4:23625150-23625169 | Msa0845000:intron | 40.0% |
| !!! | CTTTTTTGGTGTGTTGGTGA+GGG | + | chr5_4:23625268-23625287 | Msa0845000:intron | 40.0% |
| TAGCTGAACAAAGCTGGATT+TGG | - | chr5_4:23625609-23625628 | None:intergenic | 40.0% | |
| AATCAAAGGCTTGCACAATG+AGG | - | chr5_4:23625645-23625664 | None:intergenic | 40.0% | |
| TGTGCAGTGTTATAATGCGA+TGG | - | chr5_4:23625668-23625687 | None:intergenic | 40.0% | |
| TCAAGTCTATTCCATGCACA+GGG | - | chr5_4:23625843-23625862 | None:intergenic | 40.0% | |
| ATCAAGTCTATTCCATGCAC+AGG | - | chr5_4:23625844-23625863 | None:intergenic | 40.0% | |
| GACTTGATGCCAGAAATAAG+GGG | + | chr5_4:23625856-23625875 | Msa0845000:CDS | 40.0% | |
| ACTTGATGCCAGAAATAAGG+GGG | + | chr5_4:23625857-23625876 | Msa0845000:CDS | 40.0% | |
| ! | CTATCTGTTGCTGTTGTTGT+GGG | + | chr5_4:23625995-23626014 | Msa0845000:intron | 40.0% |
| CAAGATCTTCAAGCTCATCA+AGG | - | chr5_4:23626028-23626047 | None:intergenic | 40.0% | |
| CGTATTGAGCTTAGGGATTT+GGG | - | chr5_4:23626287-23626306 | None:intergenic | 40.0% | |
| AAATCCCTAAGCTCAATACG+CGG | + | chr5_4:23626287-23626306 | Msa0845000:intron | 40.0% | |
| CAACAGTGATGACTCAGATA+TGG | - | chr5_4:23626356-23626375 | None:intergenic | 40.0% | |
| AAAGAGAATATACTAGCCGG+TGG | + | chr5_4:23626475-23626494 | Msa0845000:CDS | 40.0% | |
| ! | TTTGGCTCCACTTATCGTCA+TGG | - | chr5_4:23620405-23620424 | None:intergenic | 45.0% |
| TGATTCCGCATCGTTCCTTT+AGG | + | chr5_4:23620508-23620527 | Msa0845000:intron | 45.0% | |
| CGATACCTAAAGGAACGATG+CGG | - | chr5_4:23620516-23620535 | None:intergenic | 45.0% | |
| GTCGCCATCCTTTACTGTTA+CGG | + | chr5_4:23620535-23620554 | Msa0845000:CDS | 45.0% | |
| TGTGCCGTAACAGTAAAGGA+TGG | - | chr5_4:23620542-23620561 | None:intergenic | 45.0% | |
| CATACACATGTACCTGTAGG+TGG | - | chr5_4:23620582-23620601 | None:intergenic | 45.0% | |
| GAATCGGCATCTTCACCTTT+AGG | - | chr5_4:23621388-23621407 | None:intergenic | 45.0% | |
| TACCTGAGCATCAGTGGAAT+CGG | - | chr5_4:23621120-23621139 | None:intergenic | 45.0% | |
| AAATCTCCTCCCGCAAATGT+AGG | + | chr5_4:23621426-23621445 | Msa0845000:intron | 45.0% | |
| AATCTCCTCCCGCAAATGTA+GGG | + | chr5_4:23621427-23621446 | Msa0845000:intron | 45.0% | |
| ATTGACACCCCTACATTTGC+GGG | - | chr5_4:23621438-23621457 | None:intergenic | 45.0% | |
| CATTGACACCCCTACATTTG+CGG | - | chr5_4:23621439-23621458 | None:intergenic | 45.0% | |
| CAAGGAATAGAGAAAGCAGC+TGG | - | chr5_4:23621484-23621503 | None:intergenic | 45.0% | |
| ATTGAATTGCGTTCCTGTCC+TGG | + | chr5_4:23621821-23621840 | Msa0845000:intron | 45.0% | |
| ACATGGTGATACTCCTACAC+AGG | + | chr5_4:23621927-23621946 | Msa0845000:intron | 45.0% | |
| GATACTCCTACACAGGTTTC+TGG | + | chr5_4:23621934-23621953 | Msa0845000:intron | 45.0% | |
| CGAAATCCAGAAACCTGTGT+AGG | - | chr5_4:23621943-23621962 | None:intergenic | 45.0% | |
| TTTACTGAATCTACCGGCAC+AGG | + | chr5_4:23622512-23622531 | Msa0845000:intron | 45.0% | |
| AATACAGAGTAGTCCTGTGC+CGG | - | chr5_4:23622528-23622547 | None:intergenic | 45.0% | |
| !! | TGTGGCTTATTGAGTATCGG+AGG | - | chr5_4:23622746-23622765 | None:intergenic | 45.0% |
| GTGCAATACACCAAATGGTG+GGG | + | chr5_4:23622933-23622952 | Msa0845000:intron | 45.0% | |
| CTGGCATCAACTCATGTACA+GGG | - | chr5_4:23623142-23623161 | None:intergenic | 45.0% | |
| TCTGGCATCAACTCATGTAC+AGG | - | chr5_4:23623143-23623162 | None:intergenic | 45.0% | |
| ! | TTTTGTACAGATGTCCGGAC+CGG | - | chr5_4:23623753-23623772 | None:intergenic | 45.0% |
| TCCGGACATCTGTACAAAAC+AGG | + | chr5_4:23623754-23623773 | Msa0845000:intron | 45.0% | |
| CGGAAAAAGCCCGTAAAAAC+TGG | + | chr5_4:23623790-23623809 | Msa0845000:intron | 45.0% | |
| CTAAACCCTGCACGTTAGTA+CGG | - | chr5_4:23623832-23623851 | None:intergenic | 45.0% | |
| TTCCCAAAATCGGGCTGAAA+TGG | - | chr5_4:23624064-23624083 | None:intergenic | 45.0% | |
| TACATTGCTGCAAGCCATGT+GGG | - | chr5_4:23624193-23624212 | None:intergenic | 45.0% | |
| TTACATTGCTGCAAGCCATG+TGG | - | chr5_4:23624194-23624213 | None:intergenic | 45.0% | |
| CCCTCTAAACAGGTACCATT+AGG | + | chr5_4:23624279-23624298 | Msa0845000:intron | 45.0% | |
| GCCTAATGGTACCTGTTTAG+AGG | - | chr5_4:23624283-23624302 | None:intergenic | 45.0% | |
| CTGAGCTTGGAAGTTAACCA+AGG | - | chr5_4:23624448-23624467 | None:intergenic | 45.0% | |
| CAGTCACCAGATATGAGCTT+TGG | + | chr5_4:23624493-23624512 | Msa0845000:intron | 45.0% | |
| GTCACCAGATATGAGCTTTG+GGG | + | chr5_4:23624495-23624514 | Msa0845000:intron | 45.0% | |
| ! | TCACCAGATATGAGCTTTGG+GGG | + | chr5_4:23624496-23624515 | Msa0845000:intron | 45.0% |
| !! | ATGAGCTTTGGGGGTGTATT+AGG | + | chr5_4:23624505-23624524 | Msa0845000:intron | 45.0% |
| !! | TGAGCTTTGGGGGTGTATTA+GGG | + | chr5_4:23624506-23624525 | Msa0845000:intron | 45.0% |
| CTTACTGAACCCACTTACAC+AGG | + | chr5_4:23624529-23624548 | Msa0845000:intron | 45.0% | |
| CAACGAAGTCCTGTGTAAGT+GGG | - | chr5_4:23624541-23624560 | None:intergenic | 45.0% | |
| ACAACGAAGTCCTGTGTAAG+TGG | - | chr5_4:23624542-23624561 | None:intergenic | 45.0% | |
| AGGAAGGGATCATCGTGAAT+CGG | - | chr5_4:23624727-23624746 | None:intergenic | 45.0% | |
| ATCCTACACAGGATCAGGAA+GGG | - | chr5_4:23624742-23624761 | None:intergenic | 45.0% | |
| TCAAGATCCTACACAGGATC+AGG | - | chr5_4:23624747-23624766 | None:intergenic | 45.0% | |
| AGACAGTCAAGATCCTACAC+AGG | - | chr5_4:23624753-23624772 | None:intergenic | 45.0% | |
| CAGCTGTGACTAACTCAAGA+TGG | - | chr5_4:23624797-23624816 | None:intergenic | 45.0% | |
| CATCTTGAGTTAGTCACAGC+TGG | + | chr5_4:23624795-23624814 | Msa0845000:intron | 45.0% | |
| TTGAGTTAGTCACAGCTGGA+TGG | + | chr5_4:23624799-23624818 | Msa0845000:intron | 45.0% | |
| TCCTCCATAAAATCGGAAGC+TGG | + | chr5_4:23624936-23624955 | Msa0845000:intron | 45.0% | |
| ! | CATGCCAGCTTCCGATTTTA+TGG | - | chr5_4:23624943-23624962 | None:intergenic | 45.0% |
| !! | TGCTGGTCTTGGGATGAAAA+TGG | + | chr5_4:23625045-23625064 | Msa0845000:intron | 45.0% |
| TGACAAACAACAAAAGCCGC+TGG | - | chr5_4:23625188-23625207 | None:intergenic | 45.0% | |
| CCTCACCAACACACCAAAAA+AGG | - | chr5_4:23625270-23625289 | None:intergenic | 45.0% | |
| !!! | CCTTTTTTGGTGTGTTGGTG+AGG | + | chr5_4:23625267-23625286 | Msa0845000:intron | 45.0% |
| !!! | TGCATTTTGTGGTGGATTGG+GGG | - | chr5_4:23625540-23625559 | None:intergenic | 45.0% |
| !!! | CTGCATTTTGTGGTGGATTG+GGG | - | chr5_4:23625541-23625560 | None:intergenic | 45.0% |
| !!! | CCTGCATTTTGTGGTGGATT+GGG | - | chr5_4:23625542-23625561 | None:intergenic | 45.0% |
| CCAATCCACCACAAAATGCA+GGG | + | chr5_4:23625540-23625559 | Msa0845000:intron | 45.0% | |
| GTTATTAAGCACCCTGTGCA+TGG | + | chr5_4:23625829-23625848 | Msa0845000:CDS | 45.0% | |
| ! | GCTATCTGTTGCTGTTGTTG+TGG | + | chr5_4:23625994-23626013 | Msa0845000:intron | 45.0% |
| ! | TTGCATGATGGTTTGTAGCC+TGG | + | chr5_4:23626100-23626119 | Msa0845000:intron | 45.0% |
| GCGTATTGAGCTTAGGGATT+TGG | - | chr5_4:23626288-23626307 | None:intergenic | 45.0% | |
| GTAAGAACTTTGACCTCCAC+CGG | - | chr5_4:23626494-23626513 | None:intergenic | 45.0% | |
| !!! | GATTATTATTTTTTTTTTTA+AGG | - | chr5_4:23620364-23620383 | None:intergenic | 5.0% |
| !!! | ATACTTTTTTTTTTTTTTAA+TGG | + | chr5_4:23625718-23625737 | Msa0845000:intron | 5.0% |
| AGGATGGCGACGATACCTAA+AGG | - | chr5_4:23620526-23620545 | None:intergenic | 50.0% | |
| ACACATGTACCTGTAGGTGG+CGG | - | chr5_4:23620579-23620598 | None:intergenic | 50.0% | |
| !! | TGCTGATTCCACTGATGCTC+AGG | + | chr5_4:23621115-23621134 | Msa0845000:CDS | 50.0% |
| ATCTCCTCCCGCAAATGTAG+GGG | + | chr5_4:23621428-23621447 | Msa0845000:intron | 50.0% | |
| TGCGTTCCTGTCCTGGATAA+TGG | + | chr5_4:23621828-23621847 | Msa0845000:intron | 50.0% | |
| CACGTTAGTACGGTTTCGGA+CGG | - | chr5_4:23623822-23623841 | None:intergenic | 50.0% | |
| CCTGCACGTTAGTACGGTTT+CGG | - | chr5_4:23623826-23623845 | None:intergenic | 50.0% | |
| CGAAACCGTACTAACGTGCA+GGG | + | chr5_4:23623824-23623843 | Msa0845000:intron | 50.0% | |
| GCACACAAGGCTAAACCCAA+AGG | - | chr5_4:23623891-23623910 | None:intergenic | 50.0% | |
| !! | TGGGTTTAGCCTTGTGTGCA+AGG | + | chr5_4:23623892-23623911 | Msa0845000:intron | 50.0% |
| ACATTGCTGCAAGCCATGTG+GGG | - | chr5_4:23624192-23624211 | None:intergenic | 50.0% | |
| ACACCCCCAAAGCTCATATC+TGG | - | chr5_4:23624502-23624521 | None:intergenic | 50.0% | |
| TGAATCGGGGGATCGTAACA+CGG | - | chr5_4:23624712-23624731 | None:intergenic | 50.0% | |
| AAGGGATCATCGTGAATCGG+GGG | - | chr5_4:23624724-23624743 | None:intergenic | 50.0% | |
| GAAGGGATCATCGTGAATCG+GGG | - | chr5_4:23624725-23624744 | None:intergenic | 50.0% | |
| GGAAGGGATCATCGTGAATC+GGG | - | chr5_4:23624726-23624745 | None:intergenic | 50.0% | |
| ATCCCTTCCTGATCCTGTGT+AGG | + | chr5_4:23624737-23624756 | Msa0845000:intron | 50.0% | |
| GATCCTACACAGGATCAGGA+AGG | - | chr5_4:23624743-23624762 | None:intergenic | 50.0% | |
| ! | GCCAGCTTCCGATTTTATGG+AGG | - | chr5_4:23624940-23624959 | None:intergenic | 50.0% |
| GCTGAAAGAAGACTACGAGC+CGG | + | chr5_4:23625421-23625440 | Msa0845000:CDS | 50.0% | |
| GTTGGTTACCTGAGCATCAG+CGG | - | chr5_4:23625479-23625498 | None:intergenic | 50.0% | |
| CTGATGCTCAGGTAACCAAC+TGG | + | chr5_4:23625479-23625498 | Msa0845000:intron | 50.0% | |
| !!! | ATTTTGTGGTGGATTGGGGG+GGG | - | chr5_4:23625537-23625556 | None:intergenic | 50.0% |
| !!! | CATTTTGTGGTGGATTGGGG+GGG | - | chr5_4:23625538-23625557 | None:intergenic | 50.0% |
| !!! | GCATTTTGTGGTGGATTGGG+GGG | - | chr5_4:23625539-23625558 | None:intergenic | 50.0% |
| CCCAATCCACCACAAAATGC+AGG | + | chr5_4:23625539-23625558 | Msa0845000:intron | 50.0% | |
| !!! | CCCTGCATTTTGTGGTGGAT+TGG | - | chr5_4:23625543-23625562 | None:intergenic | 50.0% |
| ! | GACATCCCTGCATTTTGTGG+TGG | - | chr5_4:23625548-23625567 | None:intergenic | 50.0% |
| ! | CGTGACATCCCTGCATTTTG+TGG | - | chr5_4:23625551-23625570 | None:intergenic | 50.0% |
| CTAGCCGCGTATTGAGCTTA+GGG | - | chr5_4:23626294-23626313 | None:intergenic | 50.0% | |
| TCTAGCCGCGTATTGAGCTT+AGG | - | chr5_4:23626295-23626314 | None:intergenic | 50.0% | |
| AAGCTCAATACGCGGCTAGA+TGG | + | chr5_4:23626295-23626314 | Msa0845000:intron | 50.0% | |
| GAGAATATACTAGCCGGTGG+AGG | + | chr5_4:23626478-23626497 | Msa0845000:CDS | 50.0% | |
| TGTCGCGCCATGACGATAAG+TGG | + | chr5_4:23620395-23620414 | Msa0845000:exon | 55.0% | |
| !! | CTGTAGGTGGCGGGTAACAT+TGG | - | chr5_4:23620569-23620588 | None:intergenic | 55.0% |
| CAATGTTACCCGCCACCTAC+AGG | + | chr5_4:23620567-23620586 | Msa0845000:CDS | 55.0% | |
| CACATGTACCTGTAGGTGGC+GGG | - | chr5_4:23620578-23620597 | None:intergenic | 55.0% | |
| ! | GCGCTGCAGTTGCTGTTGAA+TGG | + | chr5_4:23621047-23621066 | Msa0845000:intron | 55.0% |
| TCAGCCTGATCCACGGACTT+GGG | - | chr5_4:23621077-23621096 | None:intergenic | 55.0% | |
| AAGTCCGTGGATCAGGCTGA+GGG | + | chr5_4:23621077-23621096 | Msa0845000:intron | 55.0% | |
| !! | TGCCGATTCCACTGATGCTC+AGG | + | chr5_4:23621399-23621418 | Msa0845000:CDS | 55.0% |
| CTAAAGCTCCCGCATACGCA+GGG | - | chr5_4:23622971-23622990 | None:intergenic | 55.0% | |
| ACTAAAGCTCCCGCATACGC+AGG | - | chr5_4:23622972-23622991 | None:intergenic | 55.0% | |
| ! | ATGCGGGAGCTTTAGTGCAC+CGG | + | chr5_4:23622976-23622995 | Msa0845000:intron | 55.0% |
| GACCGGATTGTTTAACCGGC+TGG | + | chr5_4:23623708-23623727 | Msa0845000:intron | 55.0% | |
| GGCCAGCCGGTTAAACAATC+CGG | - | chr5_4:23623713-23623732 | None:intergenic | 55.0% | |
| GGATTGTTTAACCGGCTGGC+CGG | + | chr5_4:23623712-23623731 | Msa0845000:intron | 55.0% | |
| CCGAAACCGTACTAACGTGC+AGG | + | chr5_4:23623823-23623842 | Msa0845000:intron | 55.0% | |
| ! | GTTGGCCAAGGTTTGCTTGG+TGG | - | chr5_4:23624170-23624189 | None:intergenic | 55.0% |
| AAACCTTGGCCAACCCCACA+TGG | + | chr5_4:23624176-23624195 | Msa0845000:intron | 55.0% | |
| GGGAGAGAGAGAGAGAGACA+AGG | - | chr5_4:23624260-23624279 | None:intergenic | 55.0% | |
| CTCTCTCTCCCCCTCTAAAC+AGG | + | chr5_4:23624269-23624288 | Msa0845000:intron | 55.0% | |
| GAAAGAAGACTACGAGCCGG+TGG | + | chr5_4:23625424-23625443 | Msa0845000:CDS | 55.0% | |
| AGCTCGACTATGTCCTCCAC+CGG | - | chr5_4:23625443-23625462 | None:intergenic | 55.0% | |
| !! | TGCTGATTCCGCTGATGCTC+AGG | + | chr5_4:23625468-23625487 | Msa0845000:CDS | 55.0% |
| !!! | TTTTGTGGTGGATTGGGGGG+GGG | - | chr5_4:23625536-23625555 | None:intergenic | 55.0% |
| GCAGGGATGTCACGATCTGT+TGG | + | chr5_4:23625557-23625576 | Msa0845000:intron | 55.0% | |
| GAATGGATCGCCCAAGTCCG+TGG | + | chr5_4:23621064-23621083 | Msa0845000:intron | 60.0% | |
| ATCGCCCAAGTCCGTGGATC+AGG | + | chr5_4:23621070-23621089 | Msa0845000:intron | 60.0% | |
| CTCAGCCTGATCCACGGACT+TGG | - | chr5_4:23621078-23621097 | None:intergenic | 60.0% | |
| CAAGTCCGTGGATCAGGCTG+AGG | + | chr5_4:23621076-23621095 | Msa0845000:intron | 60.0% | |
| ACCACCCTCAGCCTGATCCA+CGG | - | chr5_4:23621084-23621103 | None:intergenic | 60.0% | |
| GACACCCCTACATTTGCGGG+AGG | - | chr5_4:23621435-23621454 | None:intergenic | 60.0% | |
| ! | TGCGGGAGCTTTAGTGCACC+GGG | + | chr5_4:23622977-23622996 | Msa0845000:intron | 60.0% |
| ! | TAACCGGCTGGCCGGTAATC+CGG | + | chr5_4:23623720-23623739 | Msa0845000:intron | 60.0% |
| CCGGAAACAGCCCGGATTAC+CGG | - | chr5_4:23623734-23623753 | None:intergenic | 60.0% | |
| ! | CCGGTAATCCGGGCTGTTTC+CGG | + | chr5_4:23623731-23623750 | Msa0845000:intron | 60.0% |
| ! | AATCCGGGCTGTTTCCGGTC+CGG | + | chr5_4:23623736-23623755 | Msa0845000:intron | 60.0% |
| !! | GGGGTTGGCCAAGGTTTGCT+TGG | - | chr5_4:23624173-23624192 | None:intergenic | 60.0% |
| !! | AAGCCATGTGGGGTTGGCCA+AGG | - | chr5_4:23624182-23624201 | None:intergenic | 60.0% |
| TGCTGCAAGCCATGTGGGGT+TGG | - | chr5_4:23624188-23624207 | None:intergenic | 60.0% | |
| AGAGAGAGACAAGGCCCGTG+TGG | - | chr5_4:23624251-23624270 | None:intergenic | 60.0% | |
| AGAAGACTACGAGCCGGTGG+AGG | + | chr5_4:23625427-23625446 | Msa0845000:CDS | 60.0% | |
| !! | TTTGTGGTGGATTGGGGGGG+GGG | - | chr5_4:23625535-23625554 | None:intergenic | 60.0% |
| TCCGTGGATCAGGCTGAGGG+TGG | + | chr5_4:23621080-23621099 | Msa0845000:intron | 65.0% | |
| ! | CAAATGGTGGGGCCCCTTCC+CGG | + | chr5_4:23622944-23622963 | Msa0845000:intron | 65.0% |
| CATACGCAGGGTCCGGGAAG+GGG | - | chr5_4:23622959-23622978 | None:intergenic | 65.0% | |
| GCATACGCAGGGTCCGGGAA+GGG | - | chr5_4:23622960-23622979 | None:intergenic | 65.0% | |
| CTTCCCGGACCCTGCGTATG+CGG | + | chr5_4:23622959-23622978 | Msa0845000:intron | 65.0% | |
| TTCCCGGACCCTGCGTATGC+GGG | + | chr5_4:23622960-23622979 | Msa0845000:intron | 65.0% | |
| ! | AACCGGCTGGCCGGTAATCC+GGG | + | chr5_4:23623721-23623740 | Msa0845000:intron | 65.0% |
| TGTCCGGACCGGAAACAGCC+CGG | - | chr5_4:23623742-23623761 | None:intergenic | 65.0% | |
| !! | TTGTGGTGGATTGGGGGGGG+GGG | - | chr5_4:23625534-23625553 | None:intergenic | 65.0% |
| CGGGAAGGGGCCCCACCATT+TGG | - | chr5_4:23622946-23622965 | None:intergenic | 70.0% | |
| CGCATACGCAGGGTCCGGGA+AGG | - | chr5_4:23622961-23622980 | None:intergenic | 70.0% | |
| CTCCCGCATACGCAGGGTCC+GGG | - | chr5_4:23622965-23622984 | None:intergenic | 70.0% | |
| GCTCCCGCATACGCAGGGTC+CGG | - | chr5_4:23622966-23622985 | None:intergenic | 70.0% | |
| AGCCCGGATTACCGGCCAGC+CGG | - | chr5_4:23623726-23623745 | None:intergenic | 70.0% | |
| !! | TGTGGTGGATTGGGGGGGGG+GGG | - | chr5_4:23625533-23625552 | None:intergenic | 70.0% |
| !! | TGGTGGATTGGGGGGGGGGG+GGG | - | chr5_4:23625531-23625550 | None:intergenic | 75.0% |
| !! | GTGGTGGATTGGGGGGGGGG+GGG | - | chr5_4:23625532-23625551 | None:intergenic | 75.0% |
| !! | TGGATTGGGGGGGGGGGGGG+GGG | - | chr5_4:23625528-23625547 | None:intergenic | 80.0% |
| !!! | GTGGATTGGGGGGGGGGGGG+GGG | - | chr5_4:23625529-23625548 | None:intergenic | 80.0% |
| !!! | GGTGGATTGGGGGGGGGGGG+GGG | - | chr5_4:23625530-23625549 | None:intergenic | 80.0% |
| ! | ATTGGGGGGGGGGGGGGGGG+GGG | - | chr5_4:23625525-23625544 | None:intergenic | 85.0% |
| ! | GATTGGGGGGGGGGGGGGGG+GGG | - | chr5_4:23625526-23625545 | None:intergenic | 85.0% |
| ! | GGATTGGGGGGGGGGGGGGG+GGG | - | chr5_4:23625527-23625546 | None:intergenic | 85.0% |
| ! | TTGGGGGGGGGGGGGGGGGG+GGG | - | chr5_4:23625524-23625543 | None:intergenic | 90.0% |
| ! | TGGGGGGGGGGGGGGGGGGG+GGG | - | chr5_4:23625523-23625542 | None:intergenic | 95.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr5_4 | gene | 23620328 | 23626516 | 23620328 | ID=Msa0845000;Name=Msa0845000 |
| chr5_4 | mRNA | 23620328 | 23626516 | 23620328 | ID=Msa0845000-mRNA-1;Parent=Msa0845000;Name=Msa0845000-mRNA-1;_AED=0.14;_eAED=0.14;_QI=76|0.87|0.77|1|1|1|9|0|189 |
| chr5_4 | exon | 23620328 | 23620455 | 23620328 | ID=Msa0845000-mRNA-1:exon:9667;Parent=Msa0845000-mRNA-1 |
| chr5_4 | exon | 23620530 | 23620588 | 23620530 | ID=Msa0845000-mRNA-1:exon:9668;Parent=Msa0845000-mRNA-1 |
| chr5_4 | exon | 23621092 | 23621136 | 23621092 | ID=Msa0845000-mRNA-1:exon:9669;Parent=Msa0845000-mRNA-1 |
| chr5_4 | exon | 23621349 | 23621420 | 23621349 | ID=Msa0845000-mRNA-1:exon:9670;Parent=Msa0845000-mRNA-1 |
| chr5_4 | exon | 23621949 | 23622008 | 23621949 | ID=Msa0845000-mRNA-1:exon:9671;Parent=Msa0845000-mRNA-1 |
| chr5_4 | exon | 23623104 | 23623181 | 23623104 | ID=Msa0845000-mRNA-1:exon:9672;Parent=Msa0845000-mRNA-1 |
| chr5_4 | exon | 23625418 | 23625489 | 23625418 | ID=Msa0845000-mRNA-1:exon:9673;Parent=Msa0845000-mRNA-1 |
| chr5_4 | exon | 23625805 | 23625888 | 23625805 | ID=Msa0845000-mRNA-1:exon:9674;Parent=Msa0845000-mRNA-1 |
| chr5_4 | exon | 23626469 | 23626516 | 23626469 | ID=Msa0845000-mRNA-1:exon:9675;Parent=Msa0845000-mRNA-1 |
| chr5_4 | five_prime_UTR | 23620328 | 23620403 | 23620328 | ID=Msa0845000-mRNA-1:five_prime_utr;Parent=Msa0845000-mRNA-1 |
| chr5_4 | CDS | 23620404 | 23620455 | 23620404 | ID=Msa0845000-mRNA-1:cds;Parent=Msa0845000-mRNA-1 |
| chr5_4 | CDS | 23620530 | 23620588 | 23620530 | ID=Msa0845000-mRNA-1:cds;Parent=Msa0845000-mRNA-1 |
| chr5_4 | CDS | 23621092 | 23621136 | 23621092 | ID=Msa0845000-mRNA-1:cds;Parent=Msa0845000-mRNA-1 |
| chr5_4 | CDS | 23621349 | 23621420 | 23621349 | ID=Msa0845000-mRNA-1:cds;Parent=Msa0845000-mRNA-1 |
| chr5_4 | CDS | 23621949 | 23622008 | 23621949 | ID=Msa0845000-mRNA-1:cds;Parent=Msa0845000-mRNA-1 |
| chr5_4 | CDS | 23623104 | 23623181 | 23623104 | ID=Msa0845000-mRNA-1:cds;Parent=Msa0845000-mRNA-1 |
| chr5_4 | CDS | 23625418 | 23625489 | 23625418 | ID=Msa0845000-mRNA-1:cds;Parent=Msa0845000-mRNA-1 |
| chr5_4 | CDS | 23625805 | 23625888 | 23625805 | ID=Msa0845000-mRNA-1:cds;Parent=Msa0845000-mRNA-1 |
| chr5_4 | CDS | 23626469 | 23626516 | 23626469 | ID=Msa0845000-mRNA-1:cds;Parent=Msa0845000-mRNA-1 |
| Gene Sequence |
| Protein sequence |
