AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar zhongmu-4 / Msa1208070


Find 239 sgRNAs with CRISPR-Local

Find 618 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-GE

Chromosome Type Strat End Strand Name
chr8_1 gene 65971532 65982827 65971532 ID=Msa1208070;Name=Msa1208070
chr8_1 mRNA 65971532 65982827 65971532 ID=Msa1208070-mRNA-1;Parent=Msa1208070;Name=Msa1208070-mRNA-1;_AED=0.10;_eAED=0.10;_QI=381|1|1|1|0.92|0.85|27|505|1038
chr8_1 exon 65971532 65971948 65971532 ID=Msa1208070-mRNA-1:exon:21702;Parent=Msa1208070-mRNA-1
chr8_1 exon 65972274 65972574 65972274 ID=Msa1208070-mRNA-1:exon:21701;Parent=Msa1208070-mRNA-1
chr8_1 exon 65972656 65972808 65972656 ID=Msa1208070-mRNA-1:exon:21700;Parent=Msa1208070-mRNA-1
chr8_1 exon 65973160 65973322 65973160 ID=Msa1208070-mRNA-1:exon:21699;Parent=Msa1208070-mRNA-1
chr8_1 exon 65973706 65973927 65973706 ID=Msa1208070-mRNA-1:exon:21698;Parent=Msa1208070-mRNA-1
chr8_1 exon 65974028 65974123 65974028 ID=Msa1208070-mRNA-1:exon:21697;Parent=Msa1208070-mRNA-1
chr8_1 exon 65974211 65974308 65974211 ID=Msa1208070-mRNA-1:exon:21696;Parent=Msa1208070-mRNA-1
chr8_1 exon 65974647 65974678 65974647 ID=Msa1208070-mRNA-1:exon:21695;Parent=Msa1208070-mRNA-1
chr8_1 exon 65974759 65974852 65974759 ID=Msa1208070-mRNA-1:exon:21694;Parent=Msa1208070-mRNA-1
chr8_1 exon 65974993 65975064 65974993 ID=Msa1208070-mRNA-1:exon:21693;Parent=Msa1208070-mRNA-1
chr8_1 exon 65975416 65975496 65975416 ID=Msa1208070-mRNA-1:exon:21692;Parent=Msa1208070-mRNA-1
chr8_1 exon 65975602 65975718 65975602 ID=Msa1208070-mRNA-1:exon:21691;Parent=Msa1208070-mRNA-1
chr8_1 exon 65975829 65975942 65975829 ID=Msa1208070-mRNA-1:exon:21690;Parent=Msa1208070-mRNA-1
chr8_1 exon 65976040 65976135 65976040 ID=Msa1208070-mRNA-1:exon:21689;Parent=Msa1208070-mRNA-1
chr8_1 exon 65976676 65976788 65976676 ID=Msa1208070-mRNA-1:exon:21688;Parent=Msa1208070-mRNA-1
chr8_1 exon 65977030 65977123 65977030 ID=Msa1208070-mRNA-1:exon:21687;Parent=Msa1208070-mRNA-1
chr8_1 exon 65977373 65977486 65977373 ID=Msa1208070-mRNA-1:exon:21686;Parent=Msa1208070-mRNA-1
chr8_1 exon 65977578 65977685 65977578 ID=Msa1208070-mRNA-1:exon:21685;Parent=Msa1208070-mRNA-1
chr8_1 exon 65977806 65977897 65977806 ID=Msa1208070-mRNA-1:exon:21684;Parent=Msa1208070-mRNA-1
chr8_1 exon 65978594 65978630 65978594 ID=Msa1208070-mRNA-1:exon:21683;Parent=Msa1208070-mRNA-1
chr8_1 exon 65979230 65979354 65979230 ID=Msa1208070-mRNA-1:exon:21682;Parent=Msa1208070-mRNA-1
chr8_1 exon 65979485 65979672 65979485 ID=Msa1208070-mRNA-1:exon:21681;Parent=Msa1208070-mRNA-1
chr8_1 exon 65980084 65980343 65980084 ID=Msa1208070-mRNA-1:exon:21680;Parent=Msa1208070-mRNA-1
chr8_1 exon 65980554 65980703 65980554 ID=Msa1208070-mRNA-1:exon:21679;Parent=Msa1208070-mRNA-1
chr8_1 exon 65980820 65980966 65980820 ID=Msa1208070-mRNA-1:exon:21678;Parent=Msa1208070-mRNA-1
chr8_1 exon 65982285 65982552 65982285 ID=Msa1208070-mRNA-1:exon:21677;Parent=Msa1208070-mRNA-1
chr8_1 exon 65982577 65982827 65982577 ID=Msa1208070-mRNA-1:exon:21676;Parent=Msa1208070-mRNA-1
chr8_1 five_prime_UTR 65982577 65982827 65982577 ID=Msa1208070-mRNA-1:five_prime_utr;Parent=Msa1208070-mRNA-1
chr8_1 five_prime_UTR 65982423 65982552 65982423 ID=Msa1208070-mRNA-1:five_prime_utr;Parent=Msa1208070-mRNA-1
chr8_1 CDS 65982285 65982422 65982285 ID=Msa1208070-mRNA-1:cds;Parent=Msa1208070-mRNA-1
chr8_1 CDS 65980820 65980966 65980820 ID=Msa1208070-mRNA-1:cds;Parent=Msa1208070-mRNA-1
chr8_1 CDS 65980554 65980703 65980554 ID=Msa1208070-mRNA-1:cds;Parent=Msa1208070-mRNA-1
chr8_1 CDS 65980084 65980343 65980084 ID=Msa1208070-mRNA-1:cds;Parent=Msa1208070-mRNA-1
chr8_1 CDS 65979485 65979672 65979485 ID=Msa1208070-mRNA-1:cds;Parent=Msa1208070-mRNA-1
chr8_1 CDS 65979230 65979354 65979230 ID=Msa1208070-mRNA-1:cds;Parent=Msa1208070-mRNA-1
chr8_1 CDS 65978594 65978630 65978594 ID=Msa1208070-mRNA-1:cds;Parent=Msa1208070-mRNA-1
chr8_1 CDS 65977806 65977897 65977806 ID=Msa1208070-mRNA-1:cds;Parent=Msa1208070-mRNA-1
chr8_1 CDS 65977578 65977685 65977578 ID=Msa1208070-mRNA-1:cds;Parent=Msa1208070-mRNA-1
chr8_1 CDS 65977373 65977486 65977373 ID=Msa1208070-mRNA-1:cds;Parent=Msa1208070-mRNA-1
chr8_1 CDS 65977030 65977123 65977030 ID=Msa1208070-mRNA-1:cds;Parent=Msa1208070-mRNA-1
chr8_1 CDS 65976676 65976788 65976676 ID=Msa1208070-mRNA-1:cds;Parent=Msa1208070-mRNA-1
chr8_1 CDS 65976040 65976135 65976040 ID=Msa1208070-mRNA-1:cds;Parent=Msa1208070-mRNA-1
chr8_1 CDS 65975829 65975942 65975829 ID=Msa1208070-mRNA-1:cds;Parent=Msa1208070-mRNA-1
chr8_1 CDS 65975602 65975718 65975602 ID=Msa1208070-mRNA-1:cds;Parent=Msa1208070-mRNA-1
chr8_1 CDS 65975416 65975496 65975416 ID=Msa1208070-mRNA-1:cds;Parent=Msa1208070-mRNA-1
chr8_1 CDS 65974993 65975064 65974993 ID=Msa1208070-mRNA-1:cds;Parent=Msa1208070-mRNA-1
chr8_1 CDS 65974759 65974852 65974759 ID=Msa1208070-mRNA-1:cds;Parent=Msa1208070-mRNA-1
chr8_1 CDS 65974647 65974678 65974647 ID=Msa1208070-mRNA-1:cds;Parent=Msa1208070-mRNA-1
chr8_1 CDS 65974211 65974308 65974211 ID=Msa1208070-mRNA-1:cds;Parent=Msa1208070-mRNA-1
chr8_1 CDS 65974028 65974123 65974028 ID=Msa1208070-mRNA-1:cds;Parent=Msa1208070-mRNA-1
chr8_1 CDS 65973706 65973927 65973706 ID=Msa1208070-mRNA-1:cds;Parent=Msa1208070-mRNA-1
chr8_1 CDS 65973160 65973322 65973160 ID=Msa1208070-mRNA-1:cds;Parent=Msa1208070-mRNA-1
chr8_1 CDS 65972656 65972808 65972656 ID=Msa1208070-mRNA-1:cds;Parent=Msa1208070-mRNA-1
chr8_1 CDS 65972362 65972574 65972362 ID=Msa1208070-mRNA-1:cds;Parent=Msa1208070-mRNA-1
chr8_1 three_prime_UTR 65972274 65972361 65972274 ID=Msa1208070-mRNA-1:three_prime_utr;Parent=Msa1208070-mRNA-1
chr8_1 three_prime_UTR 65971532 65971948 65971532 ID=Msa1208070-mRNA-1:three_prime_utr;Parent=Msa1208070-mRNA-1
Gene Sequence

>Msa1208070

ATGGAAACATCATCATCATCATCATCATCATCGGAGAATTGTTCAGTCAAAGTTGCTCTTCACATTCGTCCTCTCATTTCTGATGAAAAACAACAAGGTTGCACTCAATGTGTTTCTGTTAACCCTTCTAAACCTCAGGTTCAAATTGGGTCTCATTCTTTTACATTTGATCATGTTTATGGAAATGGTGGATCTCCTTCATCTGAAATGTTTGAGGAATGTGTTGCTCCATTGGTTGATGGCTTATTTCAAGGGTTCAATGCTACTGTACTTGCTTATGGTCAGACGGGATCCGGCAAAACATATACCATGGGAACTGCCTACAATGACAATAGTGGGATTGGGTTAATTCCTCAGGTTATGAATGCCTTGTTCAACAAGATTGAAACTCTAAAGCATCAAACAGAATTTCAGTTGCATGTTTCCTTCATTGAGATTTTGAAGGAAGAGGTAAGGGATTTGTTGGATATGGTGTCTATGGGCAAATCAGATAACTCTGGTTCTAATGGCCATTCTGGAAAATTAAATATTCCTGGGAAGCCACCGATACAAATTCGTGAATCTTCGAGTGGAGTTATAACACTGGCAGGGTCAACTGAAGTTTCTGTAAGCACATTACAGGAGATGGCTTCTTACTTGGAGCAGGGTTCTCTAAATAGGGCGACAGGAAGTACAAATATGAACAACCAATCCAGTCGGTCACACGCCATCTTCACAATTACATTAGAACAGATGCGCAAACTTCATTCATCTTCTCCCAGCAATGACACTTCGGATGAAGATATGGGTGAAGAATATCTTTCAGCAAAGCTCCATTTGGTAGATCTAGCTGGATCCGAGCGAGCTAAAAGAACTGGTTCTGATGGTCTTCGTTTAAAAGAAGGTATACACATTAATAGAGGTCTTCTTGCACTTGGTAATGTCATAAGTGCACTGGGAGACGAGAAAAAGCGAAAGGAGGGTGTTCATGTCCCTTATCGAGATAGCAAACTCACTCGACTGTTACAGGATTCACTTGGTGGAAACAGCAGAACTGTCATGATAGCTTGCATTAGCCCTGCTGACATCAATGCTGATGAAACTCTTAATACCCTTAAGTATGCGAATCGTGCACGAAACATTCAAAATAAGCCTGTTGCCAATCGAGATCTGATATCAAATGAGATGCAGCAAATGCGCCAACAGTTAAAGTACTTGCAGTCTGAGCTCTGTTCTCGAGGAGGAGGTTCGGTTGATGAAATGCAGGTTCTTAAGGAAAGGATTGCTTGGCTTGAGGAAACTAACGAGGAACTCTGTCGAGAACTTCATAAATATCGCAGTAGATGTTCTTTTACAGAAAGATGTGATATTGACGAAACAGATCGACATACTTATTTCTTGAAAAATGATGGGCTTGAGAGGCTGTTTCGGAGTTCAGAGTTATCTGACCATCTAATAGCTGGAAGCATGTCAGGTGAGGTTTCAAGGGAAGCTGATGAAGTAGAAAAAGAGTTGGAGCATACACTCCTGCTAAATACCATGGATAAAGAGATGCACGAGTTAAATAAGCAATTGGAGCAGAAAGAGACTGAGATGAAGCTCGTGGGAGTTGATACTGAAGCACTCAGGCTGCACTTTGGAAAAAAAATTATGGAACTCGAGGAAGAGAAGAGAAAAGTGCAGCAAGAAAGAGACCGACTGTTGCATGAAGTAGAGAATCTTGTAGTTAATTCAAATGGTCTGGCACATAAAACGCAAGATGTTCGAGGCCAAAAATTGAAAGCATTGGAAGCACAGATTTTAGACCTCAAGAAGAAACAAGAAAACCAAGTGCAGCTACTAAAGCAAAAGGAGAAGAGTGAAGAAGCTGCCAAAAAACTGCAAGCTGAGATACAATATATCAAGGCTCAAAAGGTTCAGTTGCAGCATAAAATAAAGCAAGAGGCAGAACAATTTCGACAATGGAAAGCTTCCCGTGAAAAGGAGTTACTTCAGTTGAAAAAGGAGGGAAGAAGGAATGAGTATGAAAGACATAAACTTGAGGCTCTAAACCAGCGCCAGAAAATGGTTCTTCATAGAAAGACCGAGGAAGCAACTATGGCTACCAAAAGGCTAAAAGAATTGTTGGAATCCCGCAAATCTTCTCCTCGTGACCACTCTGCTTATTCAAATGGACATCTACAGCCTGGGCAGATCAATGAAAAATCCCTCCAGAGGTGGCTTGATCAGGAGTTGGAGGTGATGGTACATGTGCATGAAGTTCGTGCTGAATTTGATAAACAAAACCAAGTGCATGCTTCGCTGGAAGAAGAATTGGCATTCCTGAAACAAGCAGATCAGTTTTCAGATAGGCAGAGTATCCCCGCAGGAAACAACCGATATTCAAGACTGTTATCCATGTCACAAGATGCAAAAGTTGCGAGAATAGCTTCTATTGAGAACATGCTACTAATGTCTTCAGCTGCTTTGAAAGCCATGACTTCCCAACTTACTGAGGCAGAAGAAAGAGAACGTGCATTAAATAGCCGTGGACGTTGGAATCAGTTACGCTCAATGGGAGAAGCTAAGAATGTGCTTCAGTATTTGTTCAATGCTACAGCAGAAGCAAGGTGCCAATTGTGGGAAAAGAATACGGAACTGAAGGACTTAAAAGAGCAACTTAATGAGCTTGTTATACTATTACAACAAAGTGAAACACAAAGGAAGGAACTTGTAAAAGAGAGAGAAATTGGCGAACAAGCTGTTGCCAGCACATTGAATACACCAGCATCGGAAAGCTCGCGGTCCTTGAAACACCTTGCGGATGAAATGAGTGGTCCATTGTCCCCAATGTCACTTCCTGCACCAAAGCAACTCAAATTCACCCCTGGAGTTGTTAATGGGTCAGTCAAGGAGTCATCTACATTTCTAGATGATGCACGGAAGATGGTACCCATTGGAGATTTGTCAATGAAGAGACTAGCAGCTATAGGACAAGCCGGAAAACTTTGGAGGTGGAAGAGAAGTCATCATCAATGGCTGCTCCAGTTTAAATGGAAGTGGCAAAAGCCCTGGAAACTCTCAGAATTGATCAAACACAGTGATGAAACAATCATGCGGTCAAGACCTCGAGCACAAGCTTTGATTAATGTAATGTGA

Protein sequence

>Msa1208070

METSSSSSSSSENCSVKVALHIRPLISDEKQQGCTQCVSVNPSKPQVQIGSHSFTFDHVYGNGGSPSSEMFEECVAPLVDGLFQGFNATVLAYGQTGSGKTYTMGTAYNDNSGIGLIPQVMNALFNKIETLKHQTEFQLHVSFIEILKEEVRDLLDMVSMGKSDNSGSNGHSGKLNIPGKPPIQIRESSSGVITLAGSTEVSVSTLQEMASYLEQGSLNRATGSTNMNNQSSRSHAIFTITLEQMRKLHSSSPSNDTSDEDMGEEYLSAKLHLVDLAGSERAKRTGSDGLRLKEGIHINRGLLALGNVISALGDEKKRKEGVHVPYRDSKLTRLLQDSLGGNSRTVMIACISPADINADETLNTLKYANRARNIQNKPVANRDLISNEMQQMRQQLKYLQSELCSRGGGSVDEMQVLKERIAWLEETNEELCRELHKYRSRCSFTERCDIDETDRHTYFLKNDGLERLFRSSELSDHLIAGSMSGEVSREADEVEKELEHTLLLNTMDKEMHELNKQLEQKETEMKLVGVDTEALRLHFGKKIMELEEEKRKVQQERDRLLHEVENLVVNSNGLAHKTQDVRGQKLKALEAQILDLKKKQENQVQLLKQKEKSEEAAKKLQAEIQYIKAQKVQLQHKIKQEAEQFRQWKASREKELLQLKKEGRRNEYERHKLEALNQRQKMVLHRKTEEATMATKRLKELLESRKSSPRDHSAYSNGHLQPGQINEKSLQRWLDQELEVMVHVHEVRAEFDKQNQVHASLEEELAFLKQADQFSDRQSIPAGNNRYSRLLSMSQDAKVARIASIENMLLMSSAALKAMTSQLTEAEERERALNSRGRWNQLRSMGEAKNVLQYLFNATAEARCQLWEKNTELKDLKEQLNELVILLQQSETQRKELVKEREIGEQAVASTLNTPASESSRSLKHLADEMSGPLSPMSLPAPKQLKFTPGVVNGSVKESSTFLDDARKMVPIGDLSMKRLAAIGQAGKLWRWKRSHHQWLLQFKWKWQKPWKLSELIKHSDETIMRSRPRAQALINVM*