Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1373010 | XP_024632360.1 | 71.200 | 250 | 17 | 5 | 51 | 256 | 20 | 258 | 4.42e-108 | 323 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1373010 | A0A072VBD4 | 71.200 | 250 | 17 | 5 | 51 | 256 | 20 | 258 | 2.11e-108 | 323 |
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa0014710 | Msa1373010 | 0.810790 | 9.672336e-51 | -8.615850e-47 |
| Msa0025330 | Msa1373010 | 0.802103 | 6.575600e-49 | -8.615850e-47 |
| Msa0036140 | Msa1373010 | 0.820626 | 6.210230e-53 | -8.615850e-47 |
| Msa0054480 | Msa1373010 | 0.812600 | 3.907929e-51 | -8.615850e-47 |
| Msa0068680 | Msa1373010 | 0.803478 | 3.419916e-49 | -8.615850e-47 |
| Msa0084380 | Msa1373010 | 0.803528 | 3.339469e-49 | -8.615850e-47 |
| Msa0095560 | Msa1373010 | 0.801199 | 1.007612e-48 | -8.615850e-47 |
| Msa0112750 | Msa1373010 | 0.827355 | 1.637376e-54 | -8.615850e-47 |
| Msa0114060 | Msa1373010 | 0.801958 | 7.044091e-49 | -8.615850e-47 |
| Msa1353980 | Msa1373010 | 0.819400 | 1.185048e-52 | -8.615850e-47 |
| Msa1359040 | Msa1373010 | 0.816274 | 6.017297e-52 | -8.615850e-47 |
| Msa1372760 | Msa1373010 | 0.803721 | 3.045373e-49 | -8.615850e-47 |
| Msa1372980 | Msa1373010 | 0.937191 | 5.169254e-98 | -8.615850e-47 |
| Msa1373010 | Msa1373030 | 0.929477 | 6.566673e-93 | -8.615850e-47 |
| Msa1373010 | Msa1392260 | 0.819162 | 1.342224e-52 | -8.615850e-47 |
| Msa1373010 | Msa1413610 | 0.801292 | 9.643660e-49 | -8.615850e-47 |
| Msa1373010 | Msa1415910 | 0.823166 | 1.602899e-53 | -8.615850e-47 |
| Msa1373010 | Msa1424450 | 0.804729 | 1.877970e-49 | -8.615850e-47 |
| Msa1373010 | Msa1429900 | 0.819622 | 1.054279e-52 | -8.615850e-47 |
| Msa1373010 | Msa1438250 | 0.800373 | 1.486128e-48 | -8.615850e-47 |
| Msa1373010 | Msa1452240 | 0.805744 | 1.151641e-49 | -8.615850e-47 |
| Msa1373010 | Msa1463670 | 0.816613 | 5.052710e-52 | -8.615850e-47 |
| Msa1373010 | Msa1464810 | 0.810623 | 1.051177e-50 | -8.615850e-47 |
| Msa1373010 | Msa1466540 | 0.824033 | 1.004631e-53 | -8.615850e-47 |
| Msa0611800 | Msa1373010 | 0.800915 | 1.152037e-48 | -8.615850e-47 |
| Msa0625720 | Msa1373010 | 0.813675 | 2.269952e-51 | -8.615850e-47 |
| Msa0657970 | Msa1373010 | 0.830277 | 3.216100e-55 | -8.615850e-47 |
| Msa0663390 | Msa1373010 | 0.820546 | 6.477200e-53 | -8.615850e-47 |
| Msa0663810 | Msa1373010 | 0.819701 | 1.011723e-52 | -8.615850e-47 |
| Msa0667050 | Msa1373010 | 0.805321 | 1.412382e-49 | -8.615850e-47 |
| Msa0681250 | Msa1373010 | 0.807813 | 4.207903e-50 | -8.615850e-47 |
| Msa0681270 | Msa1373010 | 0.825231 | 5.247975e-54 | -8.615850e-47 |
| Msa0688270 | Msa1373010 | 0.802053 | 6.732481e-49 | -8.615850e-47 |
| Msa0693380 | Msa1373010 | 0.801113 | 1.049316e-48 | -8.615850e-47 |
| Msa0697060 | Msa1373010 | 0.807204 | 5.666904e-50 | -8.615850e-47 |
| Msa0701830 | Msa1373010 | 0.817247 | 3.641625e-52 | -8.615850e-47 |
| Msa0703360 | Msa1373010 | 0.812567 | 3.973347e-51 | -8.615850e-47 |
| Msa0724210 | Msa1373010 | 0.822367 | 2.460565e-53 | -8.615850e-47 |
| Msa0731940 | Msa1373010 | 0.819524 | 1.110308e-52 | -8.615850e-47 |
| Msa0736000 | Msa1373010 | 0.810276 | 1.249021e-50 | -8.615850e-47 |
| Msa0745790 | Msa1373010 | 0.814482 | 1.506306e-51 | -8.615850e-47 |
| Msa0759410 | Msa1373010 | 0.837179 | 6.054280e-57 | -8.615850e-47 |
| Msa0760130 | Msa1373010 | 0.800308 | 1.532045e-48 | -8.615850e-47 |
| Msa0762970 | Msa1373010 | 0.817920 | 2.567062e-52 | -8.615850e-47 |
| Msa0766630 | Msa1373010 | 0.817213 | 3.704967e-52 | -8.615850e-47 |
| Msa0777790 | Msa1373010 | 0.826891 | 2.114620e-54 | -8.615850e-47 |
| Msa0777850 | Msa1373010 | 0.819977 | 8.745238e-53 | -8.615850e-47 |
| Msa0790510 | Msa1373010 | 0.812960 | 3.258956e-51 | -8.615850e-47 |
| Msa0796700 | Msa1373010 | 0.802593 | 5.211295e-49 | -8.615850e-47 |
| Msa0810220 | Msa1373010 | 0.811827 | 5.761563e-51 | -8.615850e-47 |
| Msa0816710 | Msa1373010 | 0.805566 | 1.254703e-49 | -8.615850e-47 |
| Msa0832340 | Msa1373010 | 0.804434 | 2.163961e-49 | -8.615850e-47 |
| Msa0840820 | Msa1373010 | 0.826379 | 2.802308e-54 | -8.615850e-47 |
| Msa0121380 | Msa1373010 | 0.800290 | 1.544580e-48 | -8.615850e-47 |
| Msa0160130 | Msa1373010 | 0.805701 | 1.175649e-49 | -8.615850e-47 |
| Msa0188830 | Msa1373010 | 0.820028 | 8.514096e-53 | -8.615850e-47 |
| Msa0212990 | Msa1373010 | 0.810684 | 1.019885e-50 | -8.615850e-47 |
| Msa0218240 | Msa1373010 | 0.823205 | 1.570063e-53 | -8.615850e-47 |
| Msa0218270 | Msa1373010 | 0.838179 | 3.354255e-57 | -8.615850e-47 |
| Msa1291660 | Msa1373010 | 0.802659 | 5.050949e-49 | -8.615850e-47 |
| Msa1296760 | Msa1373010 | 0.801131 | 1.040803e-48 | -8.615850e-47 |
| Msa1309030 | Msa1373010 | 0.803375 | 3.591812e-49 | -8.615850e-47 |
| Msa1328710 | Msa1373010 | 0.801286 | 9.674372e-49 | -8.615850e-47 |
| Msa1331000 | Msa1373010 | 0.808805 | 2.586120e-50 | -8.615850e-47 |
| Msa0402290 | Msa1373010 | 0.804593 | 2.005243e-49 | -8.615850e-47 |
| Msa0437560 | Msa1373010 | 0.802831 | 4.654331e-49 | -8.615850e-47 |
| Msa0440750 | Msa1373010 | 0.805970 | 1.032292e-49 | -8.615850e-47 |
| Msa0443260 | Msa1373010 | 0.800785 | 1.224730e-48 | -8.615850e-47 |
| Msa0479170 | Msa1373010 | 0.811565 | 6.569973e-51 | -8.615850e-47 |
| Msa0481530 | Msa1373010 | 0.815438 | 9.242440e-52 | -8.615850e-47 |
| Msa1004840 | Msa1373010 | 0.815834 | 7.546261e-52 | -8.615850e-47 |
| Msa1014540 | Msa1373010 | 0.827545 | 1.474681e-54 | -8.615850e-47 |
| Msa1035300 | Msa1373010 | 0.816315 | 5.890778e-52 | -8.615850e-47 |
| Msa1075540 | Msa1373010 | 0.828972 | 6.677123e-55 | -8.615850e-47 |
| Msa1075650 | Msa1373010 | 0.801975 | 6.985874e-49 | -8.615850e-47 |
| Msa1082500 | Msa1373010 | 0.843121 | 1.702022e-58 | -8.615850e-47 |
| Msa1098400 | Msa1373010 | 0.810195 | 1.300860e-50 | -8.615850e-47 |
| Msa0270100 | Msa1373010 | 0.811341 | 7.348690e-51 | -8.615850e-47 |
| Msa0280090 | Msa1373010 | 0.810014 | 1.422863e-50 | -8.615850e-47 |
| Msa0297050 | Msa1373010 | 0.869936 | 2.130066e-66 | -8.615850e-47 |
| Msa0309770 | Msa1373010 | 0.816437 | 5.533330e-52 | -8.615850e-47 |
| Msa0326940 | Msa1373010 | 0.811456 | 6.939025e-51 | -8.615850e-47 |
| Msa0345970 | Msa1373010 | 0.807407 | 5.132054e-50 | -8.615850e-47 |
| Msa1122520 | Msa1373010 | 0.800461 | 1.425988e-48 | -8.615850e-47 |
| Msa1131220 | Msa1373010 | 0.802503 | 5.440837e-49 | -8.615850e-47 |
| Msa0484780 | Msa1373010 | 0.828192 | 1.030707e-54 | -8.615850e-47 |
| Msa0507680 | Msa1373010 | 0.804567 | 2.030557e-49 | -8.615850e-47 |
| Msa0529890 | Msa1373010 | 0.815125 | 1.084824e-51 | -8.615850e-47 |
| Msa0532350 | Msa1373010 | 0.804904 | 1.726504e-49 | -8.615850e-47 |
| Msa0545210 | Msa1373010 | 0.809887 | 1.515461e-50 | -8.615850e-47 |
| Msa0585560 | Msa1373010 | 0.823343 | 1.457588e-53 | -8.615850e-47 |
| Msa0861130 | Msa1373010 | 0.801463 | 8.897751e-49 | -8.615850e-47 |
| Msa0898750 | Msa1373010 | 0.805693 | 1.180305e-49 | -8.615850e-47 |
| Msa0928130 | Msa1373010 | 0.802867 | 4.576195e-49 | -8.615850e-47 |
| Msa0935670 | Msa1373010 | 0.801609 | 8.307206e-49 | -8.615850e-47 |
| Msa0947660 | Msa1373010 | 0.812985 | 3.218522e-51 | -8.615850e-47 |
| Msa0969450 | Msa1373010 | 0.819517 | 1.114223e-52 | -8.615850e-47 |
| Msa0969520 | Msa1373010 | 0.802382 | 5.760998e-49 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1373010 | MtrunA17_Chr2g0320431 | 71.200 | 250 | 17 | 5 | 51 | 256 | 20 | 258 | 4.07e-112 | 323 |
| Msa1373010 | MtrunA17_Chr2g0320451 | 71.264 | 174 | 13 | 2 | 35 | 171 | 199 | 372 | 1.87e-71 | 236 |
| Msa1373010 | MtrunA17_Chr2g0314241 | 73.103 | 145 | 33 | 1 | 10 | 148 | 10 | 154 | 3.00e-69 | 210 |
| Msa1373010 | MtrunA17_Chr2g0314231 | 55.000 | 140 | 22 | 1 | 49 | 147 | 5 | 144 | 7.47e-42 | 140 |
| Msa1373010 | MtrunA17_Chr3g0079841 | 78.571 | 56 | 12 | 0 | 201 | 256 | 156 | 211 | 2.88e-21 | 90.1 |
| Msa1373010 | MtrunA17_Chr7g0265211 | 26.404 | 178 | 103 | 2 | 1 | 153 | 198 | 372 | 1.72e-12 | 67.0 |
| Msa1373010 | MtrunA17_Chr2g0320401 | 81.818 | 33 | 6 | 0 | 51 | 83 | 50 | 82 | 8.09e-11 | 57.8 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1373010 | AT2G27980.1 | 38.660 | 194 | 76 | 6 | 24 | 179 | 342 | 530 | 6.11e-27 | 109 |
Find 75 sgRNAs with CRISPR-Local
Find 266 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| GAAAGGGAAAATGGGGTTTC+TGG | 0.209531 | tig0019325:-167995 | Msa1373010:CDS |
| TTCTGGGGTTTCGCGGATTA+TGG | 0.250867 | tig0019325:-167978 | Msa1373010:CDS |
| TCTTCTGGCTACTGGGATTC+TGG | 0.255622 | tig0019325:-167918 | Msa1373010:CDS |
| AATGTTGTTGAAAGGGAAAA+TGG | 0.353344 | tig0019325:-168004 | Msa1373010:CDS |
| AGAGGATGCGCTCTTGGTTT+CGG | 0.354013 | tig0019325:-167150 | Msa1373010:CDS |
| TGTCAAGGTGAAGGATCTTC+TGG | 0.356510 | tig0019325:-167933 | Msa1373010:CDS |
| AGTGTCTGTGCTGGACTAAT+TGG | 0.366436 | tig0019325:+166222 | None:intergenic |
| CTCTGGTAGTTGGTGGGAAA+AGG | 0.369985 | tig0019325:-168086 | Msa1373010:CDS |
| GTGAAGGATCTTCTGGCTAC+TGG | 0.382782 | tig0019325:-167926 | Msa1373010:CDS |
| AAAGGGAAAATGGGGTTTCT+GGG | 0.382880 | tig0019325:-167994 | Msa1373010:CDS |
| TGAAATCACCCAGGACCATT+TGG | 0.397269 | tig0019325:+167400 | None:intergenic |
| TGAGAATGGAAAACTCCTTC+GGG | 0.415866 | tig0019325:-167475 | Msa1373010:CDS |
| AAGGATAACGATGTTGTTGT+TGG | 0.429532 | tig0019325:-168052 | Msa1373010:CDS |
| GATTATACTTACCTTGAGAA+TGG | 0.429569 | tig0019325:-167489 | Msa1373010:CDS |
| ATGTTGTTGAAAGGGAAAAT+GGG | 0.431646 | tig0019325:-168003 | Msa1373010:CDS |
| AAAAGAAGAGGATGCGCTCT+TGG | 0.439362 | tig0019325:-167156 | Msa1373010:CDS |
| ATGGGGTTTCTGGGGTTTCG+CGG | 0.444414 | tig0019325:-167985 | Msa1373010:CDS |
| ACTTCTTCCAAGAAAATAAG+AGG | 0.454192 | tig0019325:-167075 | Msa1373010:intron |
| TTGAGAATGGAAAACTCCTT+CGG | 0.454228 | tig0019325:-167476 | Msa1373010:CDS |
| AGAAGATCCTTCACCTTGAC+AGG | 0.462800 | tig0019325:+167935 | None:intergenic |
| ATCCAACGGAAGACTTGAAC+AGG | 0.468127 | tig0019325:+167440 | None:intergenic |
| GTCTCTTTCAACTCCATGCA+TGG | 0.468548 | tig0019325:+167201 | None:intergenic |
| TCAAAATATAAGAGAGAAGA+AGG | 0.468996 | tig0019325:-167126 | Msa1373010:CDS |
| ATATATAGTCACGGTGGACC+TGG | 0.469482 | tig0019325:-166154 | Msa1373010:CDS |
| TAAAGAGGTCCAAATGGTCC+TGG | 0.476200 | tig0019325:-167409 | Msa1373010:CDS |
| TTATGGTGAAGCCTGGTAAG+AGG | 0.482687 | tig0019325:-167961 | Msa1373010:CDS |
| TGAAGAGAGGCTCTGGTAGT+TGG | 0.485357 | tig0019325:-168096 | Msa1373010:CDS |
| TCAGTGCATGGAACAATTGA+CGG | 0.496206 | tig0019325:-166192 | Msa1373010:CDS |
| TCTGGTAGTTGGTGGGAAAA+GGG | 0.496285 | tig0019325:-168085 | Msa1373010:CDS |
| GTTGGATACATTGGATAAAG+AGG | 0.497086 | tig0019325:-167424 | Msa1373010:CDS |
| GAGATATGTCAAGGGACATA+AGG | 0.497217 | tig0019325:-167882 | Msa1373010:intron |
| TGCTGCTAATGTTGTTGAAA+GGG | 0.499182 | tig0019325:-168011 | Msa1373010:CDS |
| AAGTCTTCCGTTGGATACAT+TGG | 0.504489 | tig0019325:-167433 | Msa1373010:CDS |
| TTCTCAAGGTAAGTATAATC+CGG | 0.505601 | tig0019325:+167492 | None:intergenic |
| ATTGGATAAAGAGGTCCAAA+TGG | 0.516952 | tig0019325:-167415 | Msa1373010:CDS |
| CTGGCTACTGGGATTCTGGA+GGG | 0.517418 | tig0019325:-167914 | Msa1373010:CDS |
| TCGCGGATTATGGTGAAGCC+TGG | 0.518339 | tig0019325:-167968 | Msa1373010:CDS |
| TGTTGTTGAAAGGGAAAATG+GGG | 0.518988 | tig0019325:-168002 | Msa1373010:CDS |
| CAAACAATGAAGAGAGGCTC+TGG | 0.525976 | tig0019325:-168103 | None:intergenic |
| TAGTGCTAGTAAACGTCCTC+CGG | 0.529930 | tig0019325:-167511 | Msa1373010:CDS |
| TGCCTGTTCAAGTCTTCCGT+TGG | 0.532331 | tig0019325:-167442 | Msa1373010:CDS |
| TTGACAGGAAACCTCTTACC+AGG | 0.534154 | tig0019325:+167950 | None:intergenic |
| TGAAGGATCTTCTGGCTACT+GGG | 0.535951 | tig0019325:-167925 | Msa1373010:CDS |
| GGAAAAGGGTGAAGAAATCA+AGG | 0.538672 | tig0019325:-168071 | Msa1373010:CDS |
| AATATTTGTTTCAACTGCAG+AGG | 0.546957 | tig0019325:-167363 | Msa1373010:intron |
| AGAGAGGCTCTGGTAGTTGG+TGG | 0.551590 | tig0019325:-168093 | Msa1373010:CDS |
| TTGCTGCTAATGTTGTTGAA+AGG | 0.552470 | tig0019325:-168012 | Msa1373010:CDS |
| TGGTAAGAGGTTTCCTGTCA+AGG | 0.557637 | tig0019325:-167948 | Msa1373010:CDS |
| TCTGGCTACTGGGATTCTGG+AGG | 0.573761 | tig0019325:-167915 | Msa1373010:CDS |
| ATTGAAAGTGAGATATGTCA+AGG | 0.573844 | tig0019325:-167891 | Msa1373010:CDS |
| GTCAATTTCTGAATCTAACA+AGG | 0.573857 | tig0019325:-167247 | Msa1373010:CDS |
| GAAGAACCGAGTGTCTGTGC+TGG | 0.576107 | tig0019325:+166213 | None:intergenic |
| CAGTGCATGGAACAATTGAC+GGG | 0.580953 | tig0019325:-166191 | Msa1373010:CDS |
| GAGTTGAAAGAGACTTCTGC+AGG | 0.582564 | tig0019325:-167192 | Msa1373010:CDS |
| CTGGGTTCTGAACAGCTGAA+AGG | 0.586271 | tig0019325:-166135 | Msa1373010:CDS |
| TATATAGTCACGGTGGACCT+GGG | 0.588733 | tig0019325:-166153 | Msa1373010:CDS |
| ACTAGTATGCAATCCATGCA+TGG | 0.592882 | tig0019325:-167214 | Msa1373010:CDS |
| ACTTCTTCCAAGAAAAGAAG+AGG | 0.593684 | tig0019325:-167168 | Msa1373010:CDS |
| AAAGAGGTCCAAATGGTCCT+GGG | 0.599169 | tig0019325:-167408 | Msa1373010:CDS |
| GAGAGGCTCTGGTAGTTGGT+GGG | 0.603424 | tig0019325:-168092 | Msa1373010:CDS |
| GAGGTTTCCTGTCAAGGTGA+AGG | 0.604010 | tig0019325:-167942 | Msa1373010:CDS |
| AAGGGAAAATGGGGTTTCTG+GGG | 0.606981 | tig0019325:-167993 | Msa1373010:CDS |
| CTTTCAGCTGTTCAGAACCC+AGG | 0.626176 | tig0019325:+166136 | None:intergenic |
| ATTGACGGGAAATTTGATGA+CGG | 0.626327 | tig0019325:-166177 | Msa1373010:CDS |
| ACACTCGGTTCTTCAGTGCA+TGG | 0.628634 | tig0019325:-166204 | Msa1373010:CDS |
| ATTAGTCCAGCACAGACACT+CGG | 0.635032 | tig0019325:-166219 | Msa1373010:CDS |
| TCTTTATCCAATGTATCCAA+CGG | 0.644524 | tig0019325:+167426 | None:intergenic |
| TCAATTTCTGAATCTAACAA+GGG | 0.669663 | tig0019325:-167246 | Msa1373010:CDS |
| TTGAAAGTGAGATATGTCAA+GGG | 0.671458 | tig0019325:-167890 | Msa1373010:CDS |
| TGTGACCAAACAATGAAGAG+AGG | 0.676612 | tig0019325:-168109 | None:intergenic |
| TGATGACGGATATATAGTCA+CGG | 0.676944 | tig0019325:-166163 | Msa1373010:CDS |
| AGGCATTCATGACATCCCGA+AGG | 0.693693 | tig0019325:+167460 | None:intergenic |
| TCAAGGTAAGTATAATCCGG+AGG | 0.695456 | tig0019325:+167495 | None:intergenic |
| ACTGCATTGTGAAATCACCC+AGG | 0.736544 | tig0019325:+167391 | None:intergenic |
| TGACGGATATATAGTCACGG+TGG | 0.799576 | tig0019325:-166160 | Msa1373010:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | AAATTACAAGTTTAATCAAA+AGG | + | tig0019325:166928-166947 | None:intergenic | 15.0% |
| !! | AAATTACAAGTTTAATCAAA+AGG | + | tig0019325:166928-166947 | None:intergenic | 15.0% |
| !!! | GTTTTGAACTTTTTTGATTT+TGG | - | tig0019325:166360-166379 | Msa1373010:intron | 20.0% |
| !!! | AATTTTGATGAACTATTTGT+AGG | - | tig0019325:166943-166962 | Msa1373010:intron | 20.0% |
| !!! | ATTTTGATGAACTATTTGTA+GGG | - | tig0019325:166944-166963 | Msa1373010:intron | 20.0% |
| !!! | TATAATATTTTTCTGTGATG+TGG | - | tig0019325:167311-167330 | Msa1373010:intron | 20.0% |
| !!! | GTTTTGAACTTTTTTGATTT+TGG | - | tig0019325:166360-166379 | Msa1373010:intron | 20.0% |
| !!! | AATTTTGATGAACTATTTGT+AGG | - | tig0019325:166943-166962 | Msa1373010:intron | 20.0% |
| !!! | ATTTTGATGAACTATTTGTA+GGG | - | tig0019325:166944-166963 | Msa1373010:intron | 20.0% |
| !!! | TATAATATTTTTCTGTGATG+TGG | - | tig0019325:167311-167330 | Msa1373010:intron | 20.0% |
| ! | TTTATTCGTAAATGATGTGT+AGG | - | tig0019325:166454-166473 | Msa1373010:intron | 25.0% |
| !!! | TATTGTTTTTTTTGCTTGTG+TGG | - | tig0019325:166584-166603 | Msa1373010:intron | 25.0% |
| !!! | ATTGTTTTTTTTGCTTGTGT+GGG | - | tig0019325:166585-166604 | Msa1373010:intron | 25.0% |
| ! | TCAATTTCTGAATCTAACAA+GGG | - | tig0019325:166967-166986 | Msa1373010:intron | 25.0% |
| ! | TCAAAATATAAGAGAGAAGA+AGG | - | tig0019325:167087-167106 | Msa1373010:CDS | 25.0% |
| !!! | TGTAATACCTCTTATTTTCT+TGG | + | tig0019325:167148-167167 | None:intergenic | 25.0% |
| !!! | GATATTTGATTGACTTCTTT+TGG | - | tig0019325:167353-167372 | Msa1373010:intron | 25.0% |
| !!! | TGATTCTTTTGTTTTGAAAC+TGG | - | tig0019325:167416-167435 | Msa1373010:CDS | 25.0% |
| !! | TCGTTTCTTTAATTTAGACT+TGG | - | tig0019325:167472-167491 | Msa1373010:CDS | 25.0% |
| ! | ATTATGACATCGTTTAATCT+GGG | - | tig0019325:167569-167588 | Msa1373010:intron | 25.0% |
| ! | AACTAATGGAAACAACTTAT+AGG | - | tig0019325:167754-167773 | Msa1373010:intron | 25.0% |
| ! | AACAAAGTTCTTATCTATGT+TGG | - | tig0019325:167908-167927 | Msa1373010:CDS | 25.0% |
| ! | TTTATTCGTAAATGATGTGT+AGG | - | tig0019325:166454-166473 | Msa1373010:intron | 25.0% |
| !!! | TATTGTTTTTTTTGCTTGTG+TGG | - | tig0019325:166584-166603 | Msa1373010:intron | 25.0% |
| !!! | ATTGTTTTTTTTGCTTGTGT+GGG | - | tig0019325:166585-166604 | Msa1373010:intron | 25.0% |
| ! | TCAATTTCTGAATCTAACAA+GGG | - | tig0019325:166967-166986 | Msa1373010:intron | 25.0% |
| ! | TCAAAATATAAGAGAGAAGA+AGG | - | tig0019325:167087-167106 | Msa1373010:CDS | 25.0% |
| !!! | TGTAATACCTCTTATTTTCT+TGG | + | tig0019325:167148-167167 | None:intergenic | 25.0% |
| !!! | GATATTTGATTGACTTCTTT+TGG | - | tig0019325:167353-167372 | Msa1373010:intron | 25.0% |
| !!! | TGATTCTTTTGTTTTGAAAC+TGG | - | tig0019325:167416-167435 | Msa1373010:CDS | 25.0% |
| !! | TCGTTTCTTTAATTTAGACT+TGG | - | tig0019325:167472-167491 | Msa1373010:CDS | 25.0% |
| ! | ATTATGACATCGTTTAATCT+GGG | - | tig0019325:167569-167588 | Msa1373010:intron | 25.0% |
| ! | AACTAATGGAAACAACTTAT+AGG | - | tig0019325:167754-167773 | Msa1373010:intron | 25.0% |
| ! | AACAAAGTTCTTATCTATGT+TGG | - | tig0019325:167908-167927 | Msa1373010:CDS | 25.0% |
| AATGTTGTTGAAAGGGAAAA+TGG | - | tig0019325:166209-166228 | Msa1373010:CDS | 30.0% | |
| ATGTTGTTGAAAGGGAAAAT+GGG | - | tig0019325:166210-166229 | Msa1373010:CDS | 30.0% | |
| ATTGAAAGTGAGATATGTCA+AGG | - | tig0019325:166322-166341 | Msa1373010:intron | 30.0% | |
| TTGAAAGTGAGATATGTCAA+GGG | - | tig0019325:166323-166342 | Msa1373010:intron | 30.0% | |
| !!! | GAACTTTTTTGATTTTGGTC+TGG | - | tig0019325:166365-166384 | Msa1373010:intron | 30.0% |
| GTGAAATTGAGAATGATGTT+CGG | - | tig0019325:166391-166410 | Msa1373010:intron | 30.0% | |
| !!! | GGATTTTTTTTGCTATCTTG+TGG | - | tig0019325:166412-166431 | Msa1373010:intron | 30.0% |
| !!! | TGTTGTTTTTTGTTGAGAGT+AGG | - | tig0019325:166645-166664 | Msa1373010:intron | 30.0% |
| TTCTCAAGGTAAGTATAATC+CGG | + | tig0019325:166724-166743 | None:intergenic | 30.0% | |
| GATTATACTTACCTTGAGAA+TGG | - | tig0019325:166724-166743 | Msa1373010:intron | 30.0% | |
| TCTTTATCCAATGTATCCAA+CGG | + | tig0019325:166790-166809 | None:intergenic | 30.0% | |
| AATATTTGTTTCAACTGCAG+AGG | - | tig0019325:166850-166869 | Msa1373010:intron | 30.0% | |
| GTCAATTTCTGAATCTAACA+AGG | - | tig0019325:166966-166985 | Msa1373010:intron | 30.0% | |
| !!! | TTCTGCAGAAGTAGTTTTTT+CGG | + | tig0019325:167118-167137 | None:intergenic | 30.0% |
| ACTTCTTCCAAGAAAATAAG+AGG | - | tig0019325:167138-167157 | Msa1373010:CDS | 30.0% | |
| GGACGTATAGTCAATATTAT+TGG | + | tig0019325:167217-167236 | None:intergenic | 30.0% | |
| AGAAACGAATCATCTATGAA+TGG | + | tig0019325:167460-167479 | None:intergenic | 30.0% | |
| CATTATGACATCGTTTAATC+TGG | - | tig0019325:167568-167587 | Msa1373010:intron | 30.0% | |
| AATGTTGTTGAAAGGGAAAA+TGG | - | tig0019325:166209-166228 | Msa1373010:CDS | 30.0% | |
| ATGTTGTTGAAAGGGAAAAT+GGG | - | tig0019325:166210-166229 | Msa1373010:CDS | 30.0% | |
| ATTGAAAGTGAGATATGTCA+AGG | - | tig0019325:166322-166341 | Msa1373010:intron | 30.0% | |
| TTGAAAGTGAGATATGTCAA+GGG | - | tig0019325:166323-166342 | Msa1373010:intron | 30.0% | |
| !!! | GAACTTTTTTGATTTTGGTC+TGG | - | tig0019325:166365-166384 | Msa1373010:intron | 30.0% |
| GTGAAATTGAGAATGATGTT+CGG | - | tig0019325:166391-166410 | Msa1373010:intron | 30.0% | |
| !!! | GGATTTTTTTTGCTATCTTG+TGG | - | tig0019325:166412-166431 | Msa1373010:intron | 30.0% |
| !!! | TGTTGTTTTTTGTTGAGAGT+AGG | - | tig0019325:166645-166664 | Msa1373010:intron | 30.0% |
| TTCTCAAGGTAAGTATAATC+CGG | + | tig0019325:166724-166743 | None:intergenic | 30.0% | |
| GATTATACTTACCTTGAGAA+TGG | - | tig0019325:166724-166743 | Msa1373010:intron | 30.0% | |
| TCTTTATCCAATGTATCCAA+CGG | + | tig0019325:166790-166809 | None:intergenic | 30.0% | |
| AATATTTGTTTCAACTGCAG+AGG | - | tig0019325:166850-166869 | Msa1373010:intron | 30.0% | |
| GTCAATTTCTGAATCTAACA+AGG | - | tig0019325:166966-166985 | Msa1373010:intron | 30.0% | |
| !!! | TTCTGCAGAAGTAGTTTTTT+CGG | + | tig0019325:167118-167137 | None:intergenic | 30.0% |
| ACTTCTTCCAAGAAAATAAG+AGG | - | tig0019325:167138-167157 | Msa1373010:CDS | 30.0% | |
| GGACGTATAGTCAATATTAT+TGG | + | tig0019325:167217-167236 | None:intergenic | 30.0% | |
| AGAAACGAATCATCTATGAA+TGG | + | tig0019325:167460-167479 | None:intergenic | 30.0% | |
| CATTATGACATCGTTTAATC+TGG | - | tig0019325:167568-167587 | Msa1373010:intron | 30.0% | |
| AAGGATAACGATGTTGTTGT+TGG | - | tig0019325:166161-166180 | Msa1373010:CDS | 35.0% | |
| TTGCTGCTAATGTTGTTGAA+AGG | - | tig0019325:166201-166220 | Msa1373010:CDS | 35.0% | |
| TGCTGCTAATGTTGTTGAAA+GGG | - | tig0019325:166202-166221 | Msa1373010:CDS | 35.0% | |
| TGTTGTTGAAAGGGAAAATG+GGG | - | tig0019325:166211-166230 | Msa1373010:CDS | 35.0% | |
| ! | TCAGGAATTTTGTGCTTTTG+TGG | - | tig0019325:166521-166540 | Msa1373010:intron | 35.0% |
| ! | CAGGAATTTTGTGCTTTTGT+GGG | - | tig0019325:166522-166541 | Msa1373010:intron | 35.0% |
| GCATGCAACTCAAAAACATT+CGG | + | tig0019325:166679-166698 | None:intergenic | 35.0% | |
| !!! | AATGTTTTTGAGTTGCATGC+TGG | - | tig0019325:166679-166698 | Msa1373010:intron | 35.0% |
| TTGAGAATGGAAAACTCCTT+CGG | - | tig0019325:166737-166756 | Msa1373010:intron | 35.0% | |
| GTTGGATACATTGGATAAAG+AGG | - | tig0019325:166789-166808 | Msa1373010:intron | 35.0% | |
| ATTGGATAAAGAGGTCCAAA+TGG | - | tig0019325:166798-166817 | Msa1373010:intron | 35.0% | |
| AATTACATAGTGTCACAGCT+AGG | + | tig0019325:166899-166918 | None:intergenic | 35.0% | |
| ACTTCTTCCAAGAAAAGAAG+AGG | - | tig0019325:167045-167064 | Msa1373010:intron | 35.0% | |
| TATACGTCCATCATGAGTTA+GGG | - | tig0019325:167228-167247 | Msa1373010:CDS | 35.0% | |
| ATGTATACCCTAACTCATGA+TGG | + | tig0019325:167238-167257 | None:intergenic | 35.0% | |
| TCTATCATAAGTTGTGTCGA+TGG | + | tig0019325:167547-167566 | None:intergenic | 35.0% | |
| ATTTACTGCCATAAGCACAT+AGG | - | tig0019325:167643-167662 | Msa1373010:intron | 35.0% | |
| AAACTCTCCTAGAGAACTAA+TGG | - | tig0019325:167740-167759 | Msa1373010:intron | 35.0% | |
| ! | GTTGTTTCCATTAGTTCTCT+AGG | + | tig0019325:167750-167769 | None:intergenic | 35.0% |
| ATTGACGGGAAATTTGATGA+CGG | - | tig0019325:168036-168055 | Msa1373010:CDS | 35.0% | |
| !! | TGATGACGGATATATAGTCA+CGG | - | tig0019325:168050-168069 | Msa1373010:CDS | 35.0% |
| AAGGATAACGATGTTGTTGT+TGG | - | tig0019325:166161-166180 | Msa1373010:CDS | 35.0% | |
| TTGCTGCTAATGTTGTTGAA+AGG | - | tig0019325:166201-166220 | Msa1373010:CDS | 35.0% | |
| TGCTGCTAATGTTGTTGAAA+GGG | - | tig0019325:166202-166221 | Msa1373010:CDS | 35.0% | |
| TGTTGTTGAAAGGGAAAATG+GGG | - | tig0019325:166211-166230 | Msa1373010:CDS | 35.0% | |
| ! | TCAGGAATTTTGTGCTTTTG+TGG | - | tig0019325:166521-166540 | Msa1373010:intron | 35.0% |
| ! | CAGGAATTTTGTGCTTTTGT+GGG | - | tig0019325:166522-166541 | Msa1373010:intron | 35.0% |
| GCATGCAACTCAAAAACATT+CGG | + | tig0019325:166679-166698 | None:intergenic | 35.0% | |
| !!! | AATGTTTTTGAGTTGCATGC+TGG | - | tig0019325:166679-166698 | Msa1373010:intron | 35.0% |
| TTGAGAATGGAAAACTCCTT+CGG | - | tig0019325:166737-166756 | Msa1373010:intron | 35.0% | |
| GTTGGATACATTGGATAAAG+AGG | - | tig0019325:166789-166808 | Msa1373010:intron | 35.0% | |
| ATTGGATAAAGAGGTCCAAA+TGG | - | tig0019325:166798-166817 | Msa1373010:intron | 35.0% | |
| AATTACATAGTGTCACAGCT+AGG | + | tig0019325:166899-166918 | None:intergenic | 35.0% | |
| ACTTCTTCCAAGAAAAGAAG+AGG | - | tig0019325:167045-167064 | Msa1373010:intron | 35.0% | |
| TATACGTCCATCATGAGTTA+GGG | - | tig0019325:167228-167247 | Msa1373010:CDS | 35.0% | |
| ATGTATACCCTAACTCATGA+TGG | + | tig0019325:167238-167257 | None:intergenic | 35.0% | |
| TCTATCATAAGTTGTGTCGA+TGG | + | tig0019325:167547-167566 | None:intergenic | 35.0% | |
| ATTTACTGCCATAAGCACAT+AGG | - | tig0019325:167643-167662 | Msa1373010:intron | 35.0% | |
| AAACTCTCCTAGAGAACTAA+TGG | - | tig0019325:167740-167759 | Msa1373010:intron | 35.0% | |
| ! | GTTGTTTCCATTAGTTCTCT+AGG | + | tig0019325:167750-167769 | None:intergenic | 35.0% |
| ATTGACGGGAAATTTGATGA+CGG | - | tig0019325:168036-168055 | Msa1373010:CDS | 35.0% | |
| !! | TGATGACGGATATATAGTCA+CGG | - | tig0019325:168050-168069 | Msa1373010:CDS | 35.0% |
| GGAAAAGGGTGAAGAAATCA+AGG | - | tig0019325:166142-166161 | Msa1373010:CDS | 40.0% | |
| AAAGGGAAAATGGGGTTTCT+GGG | - | tig0019325:166219-166238 | Msa1373010:CDS | 40.0% | |
| GAGATATGTCAAGGGACATA+AGG | - | tig0019325:166331-166350 | Msa1373010:intron | 40.0% | |
| ! | CCTTGTAAATCCTTTTCTCC+CGG | + | tig0019325:166488-166507 | None:intergenic | 40.0% |
| CAAGGTGTGATCAAAGATTC+AGG | - | tig0019325:166503-166522 | Msa1373010:intron | 40.0% | |
| ! | TGCTTTTGTGGGAGTTGTAA+GGG | - | tig0019325:166533-166552 | Msa1373010:intron | 40.0% |
| GAATCAGGCAAGTAAATGGA+GGG | - | tig0019325:166556-166575 | Msa1373010:intron | 40.0% | |
| TCAAGGTAAGTATAATCCGG+AGG | + | tig0019325:166721-166740 | None:intergenic | 40.0% | |
| ! | GAAGGAGTTTTCCATTCTCA+AGG | + | tig0019325:166738-166757 | None:intergenic | 40.0% |
| TGAGAATGGAAAACTCCTTC+GGG | - | tig0019325:166738-166757 | Msa1373010:intron | 40.0% | |
| AAGTCTTCCGTTGGATACAT+TGG | - | tig0019325:166780-166799 | Msa1373010:intron | 40.0% | |
| ACTAGTATGCAATCCATGCA+TGG | - | tig0019325:166999-167018 | Msa1373010:intron | 40.0% | |
| !!! | GCAGAAGTAGTTTTTTCGGA+AGG | + | tig0019325:167114-167133 | None:intergenic | 40.0% |
| CTATACGTCCATCATGAGTT+AGG | - | tig0019325:167227-167246 | Msa1373010:CDS | 40.0% | |
| GTGATGTGGAAATAGAAGCA+AGG | - | tig0019325:167325-167344 | Msa1373010:intron | 40.0% | |
| ! | ATCGAAAGCTTTATCGCACT+AGG | + | tig0019325:167607-167626 | None:intergenic | 40.0% |
| AACAGTCACCTATGTGCTTA+TGG | + | tig0019325:167654-167673 | None:intergenic | 40.0% | |
| TAAGCACATAGGTGACTGTT+TGG | - | tig0019325:167654-167673 | Msa1373010:intron | 40.0% | |
| AAGCACATAGGTGACTGTTT+GGG | - | tig0019325:167655-167674 | Msa1373010:intron | 40.0% | |
| TTGGGAGAGCTTATGGATAT+TGG | - | tig0019325:167673-167692 | Msa1373010:intron | 40.0% | |
| TCAGTGCATGGAACAATTGA+CGG | - | tig0019325:168021-168040 | Msa1373010:CDS | 40.0% | |
| GGAAAAGGGTGAAGAAATCA+AGG | - | tig0019325:166142-166161 | Msa1373010:CDS | 40.0% | |
| AAAGGGAAAATGGGGTTTCT+GGG | - | tig0019325:166219-166238 | Msa1373010:CDS | 40.0% | |
| GAGATATGTCAAGGGACATA+AGG | - | tig0019325:166331-166350 | Msa1373010:intron | 40.0% | |
| ! | CCTTGTAAATCCTTTTCTCC+CGG | + | tig0019325:166488-166507 | None:intergenic | 40.0% |
| CAAGGTGTGATCAAAGATTC+AGG | - | tig0019325:166503-166522 | Msa1373010:intron | 40.0% | |
| ! | TGCTTTTGTGGGAGTTGTAA+GGG | - | tig0019325:166533-166552 | Msa1373010:intron | 40.0% |
| GAATCAGGCAAGTAAATGGA+GGG | - | tig0019325:166556-166575 | Msa1373010:intron | 40.0% | |
| TCAAGGTAAGTATAATCCGG+AGG | + | tig0019325:166721-166740 | None:intergenic | 40.0% | |
| ! | GAAGGAGTTTTCCATTCTCA+AGG | + | tig0019325:166738-166757 | None:intergenic | 40.0% |
| TGAGAATGGAAAACTCCTTC+GGG | - | tig0019325:166738-166757 | Msa1373010:intron | 40.0% | |
| AAGTCTTCCGTTGGATACAT+TGG | - | tig0019325:166780-166799 | Msa1373010:intron | 40.0% | |
| ACTAGTATGCAATCCATGCA+TGG | - | tig0019325:166999-167018 | Msa1373010:intron | 40.0% | |
| !!! | GCAGAAGTAGTTTTTTCGGA+AGG | + | tig0019325:167114-167133 | None:intergenic | 40.0% |
| CTATACGTCCATCATGAGTT+AGG | - | tig0019325:167227-167246 | Msa1373010:CDS | 40.0% | |
| GTGATGTGGAAATAGAAGCA+AGG | - | tig0019325:167325-167344 | Msa1373010:intron | 40.0% | |
| ! | ATCGAAAGCTTTATCGCACT+AGG | + | tig0019325:167607-167626 | None:intergenic | 40.0% |
| AACAGTCACCTATGTGCTTA+TGG | + | tig0019325:167654-167673 | None:intergenic | 40.0% | |
| TAAGCACATAGGTGACTGTT+TGG | - | tig0019325:167654-167673 | Msa1373010:intron | 40.0% | |
| AAGCACATAGGTGACTGTTT+GGG | - | tig0019325:167655-167674 | Msa1373010:intron | 40.0% | |
| TTGGGAGAGCTTATGGATAT+TGG | - | tig0019325:167673-167692 | Msa1373010:intron | 40.0% | |
| TCAGTGCATGGAACAATTGA+CGG | - | tig0019325:168021-168040 | Msa1373010:CDS | 40.0% | |
| !! | TCTGGTAGTTGGTGGGAAAA+GGG | - | tig0019325:166128-166147 | Msa1373010:CDS | 45.0% |
| GAAAGGGAAAATGGGGTTTC+TGG | - | tig0019325:166218-166237 | Msa1373010:CDS | 45.0% | |
| AAGGGAAAATGGGGTTTCTG+GGG | - | tig0019325:166220-166239 | Msa1373010:CDS | 45.0% | |
| TTATGGTGAAGCCTGGTAAG+AGG | - | tig0019325:166252-166271 | Msa1373010:intron | 45.0% | |
| TTGACAGGAAACCTCTTACC+AGG | + | tig0019325:166266-166285 | None:intergenic | 45.0% | |
| TGGTAAGAGGTTTCCTGTCA+AGG | - | tig0019325:166265-166284 | Msa1373010:intron | 45.0% | |
| AGAAGATCCTTCACCTTGAC+AGG | + | tig0019325:166281-166300 | None:intergenic | 45.0% | |
| TGTCAAGGTGAAGGATCTTC+TGG | - | tig0019325:166280-166299 | Msa1373010:intron | 45.0% | |
| ! | TGAAGGATCTTCTGGCTACT+GGG | - | tig0019325:166288-166307 | Msa1373010:intron | 45.0% |
| CCGGGAGAAAAGGATTTACA+AGG | - | tig0019325:166485-166504 | Msa1373010:intron | 45.0% | |
| ! | GTGCTTTTGTGGGAGTTGTA+AGG | - | tig0019325:166532-166551 | Msa1373010:intron | 45.0% |
| ! | GCTTTTGTGGGAGTTGTAAG+GGG | - | tig0019325:166534-166553 | Msa1373010:intron | 45.0% |
| AGGGGAATCAGGCAAGTAAA+TGG | - | tig0019325:166552-166571 | Msa1373010:intron | 45.0% | |
| GGAATCAGGCAAGTAAATGG+AGG | - | tig0019325:166555-166574 | Msa1373010:intron | 45.0% | |
| GTGTGGGTTTAGCATCTTGT+AGG | - | tig0019325:166601-166620 | Msa1373010:intron | 45.0% | |
| TAGTGCTAGTAAACGTCCTC+CGG | - | tig0019325:166702-166721 | Msa1373010:intron | 45.0% | |
| ATCCAACGGAAGACTTGAAC+AGG | + | tig0019325:166776-166795 | None:intergenic | 45.0% | |
| TAAAGAGGTCCAAATGGTCC+TGG | - | tig0019325:166804-166823 | Msa1373010:intron | 45.0% | |
| AAAGAGGTCCAAATGGTCCT+GGG | - | tig0019325:166805-166824 | Msa1373010:intron | 45.0% | |
| TGAAATCACCCAGGACCATT+TGG | + | tig0019325:166816-166835 | None:intergenic | 45.0% | |
| ACTGCATTGTGAAATCACCC+AGG | + | tig0019325:166825-166844 | None:intergenic | 45.0% | |
| GTCTCTTTCAACTCCATGCA+TGG | + | tig0019325:167015-167034 | None:intergenic | 45.0% | |
| GAGTTGAAAGAGACTTCTGC+AGG | - | tig0019325:167021-167040 | Msa1373010:intron | 45.0% | |
| ! | AGCGCATCCTCTTCTTTTCT+TGG | + | tig0019325:167055-167074 | None:intergenic | 45.0% |
| AAAAGAAGAGGATGCGCTCT+TGG | - | tig0019325:167057-167076 | Msa1373010:intron | 45.0% | |
| TGACTGTTTGGGAGAGCTTA+TGG | - | tig0019325:167666-167685 | Msa1373010:intron | 45.0% | |
| AGTGTCTGTGCTGGACTAAT+TGG | + | tig0019325:167994-168013 | None:intergenic | 45.0% | |
| ATTAGTCCAGCACAGACACT+CGG | - | tig0019325:167994-168013 | Msa1373010:CDS | 45.0% | |
| CAGTGCATGGAACAATTGAC+GGG | - | tig0019325:168022-168041 | Msa1373010:CDS | 45.0% | |
| ! | TGACGGATATATAGTCACGG+TGG | - | tig0019325:168053-168072 | Msa1373010:CDS | 45.0% |
| ATATATAGTCACGGTGGACC+TGG | - | tig0019325:168059-168078 | Msa1373010:CDS | 45.0% | |
| TATATAGTCACGGTGGACCT+GGG | - | tig0019325:168060-168079 | Msa1373010:CDS | 45.0% | |
| !! | TCTGGTAGTTGGTGGGAAAA+GGG | - | tig0019325:166128-166147 | Msa1373010:CDS | 45.0% |
| GAAAGGGAAAATGGGGTTTC+TGG | - | tig0019325:166218-166237 | Msa1373010:CDS | 45.0% | |
| AAGGGAAAATGGGGTTTCTG+GGG | - | tig0019325:166220-166239 | Msa1373010:CDS | 45.0% | |
| TTATGGTGAAGCCTGGTAAG+AGG | - | tig0019325:166252-166271 | Msa1373010:intron | 45.0% | |
| TTGACAGGAAACCTCTTACC+AGG | + | tig0019325:166266-166285 | None:intergenic | 45.0% | |
| TGGTAAGAGGTTTCCTGTCA+AGG | - | tig0019325:166265-166284 | Msa1373010:intron | 45.0% | |
| AGAAGATCCTTCACCTTGAC+AGG | + | tig0019325:166281-166300 | None:intergenic | 45.0% | |
| TGTCAAGGTGAAGGATCTTC+TGG | - | tig0019325:166280-166299 | Msa1373010:intron | 45.0% | |
| ! | TGAAGGATCTTCTGGCTACT+GGG | - | tig0019325:166288-166307 | Msa1373010:intron | 45.0% |
| CCGGGAGAAAAGGATTTACA+AGG | - | tig0019325:166485-166504 | Msa1373010:intron | 45.0% | |
| ! | GTGCTTTTGTGGGAGTTGTA+AGG | - | tig0019325:166532-166551 | Msa1373010:intron | 45.0% |
| ! | GCTTTTGTGGGAGTTGTAAG+GGG | - | tig0019325:166534-166553 | Msa1373010:intron | 45.0% |
| AGGGGAATCAGGCAAGTAAA+TGG | - | tig0019325:166552-166571 | Msa1373010:intron | 45.0% | |
| GGAATCAGGCAAGTAAATGG+AGG | - | tig0019325:166555-166574 | Msa1373010:intron | 45.0% | |
| GTGTGGGTTTAGCATCTTGT+AGG | - | tig0019325:166601-166620 | Msa1373010:intron | 45.0% | |
| TAGTGCTAGTAAACGTCCTC+CGG | - | tig0019325:166702-166721 | Msa1373010:intron | 45.0% | |
| ATCCAACGGAAGACTTGAAC+AGG | + | tig0019325:166776-166795 | None:intergenic | 45.0% | |
| TAAAGAGGTCCAAATGGTCC+TGG | - | tig0019325:166804-166823 | Msa1373010:intron | 45.0% | |
| AAAGAGGTCCAAATGGTCCT+GGG | - | tig0019325:166805-166824 | Msa1373010:intron | 45.0% | |
| TGAAATCACCCAGGACCATT+TGG | + | tig0019325:166816-166835 | None:intergenic | 45.0% | |
| ACTGCATTGTGAAATCACCC+AGG | + | tig0019325:166825-166844 | None:intergenic | 45.0% | |
| GTCTCTTTCAACTCCATGCA+TGG | + | tig0019325:167015-167034 | None:intergenic | 45.0% | |
| GAGTTGAAAGAGACTTCTGC+AGG | - | tig0019325:167021-167040 | Msa1373010:intron | 45.0% | |
| ! | AGCGCATCCTCTTCTTTTCT+TGG | + | tig0019325:167055-167074 | None:intergenic | 45.0% |
| AAAAGAAGAGGATGCGCTCT+TGG | - | tig0019325:167057-167076 | Msa1373010:intron | 45.0% | |
| TGACTGTTTGGGAGAGCTTA+TGG | - | tig0019325:167666-167685 | Msa1373010:intron | 45.0% | |
| AGTGTCTGTGCTGGACTAAT+TGG | + | tig0019325:167994-168013 | None:intergenic | 45.0% | |
| ATTAGTCCAGCACAGACACT+CGG | - | tig0019325:167994-168013 | Msa1373010:CDS | 45.0% | |
| CAGTGCATGGAACAATTGAC+GGG | - | tig0019325:168022-168041 | Msa1373010:CDS | 45.0% | |
| ! | TGACGGATATATAGTCACGG+TGG | - | tig0019325:168053-168072 | Msa1373010:CDS | 45.0% |
| ATATATAGTCACGGTGGACC+TGG | - | tig0019325:168059-168078 | Msa1373010:CDS | 45.0% | |
| TATATAGTCACGGTGGACCT+GGG | - | tig0019325:168060-168079 | Msa1373010:CDS | 45.0% | |
| ! | TGAAGAGAGGCTCTGGTAGT+TGG | - | tig0019325:166117-166136 | Msa1373010:CDS | 50.0% |
| !! | CTCTGGTAGTTGGTGGGAAA+AGG | - | tig0019325:166127-166146 | Msa1373010:CDS | 50.0% |
| !! | TTCTGGGGTTTCGCGGATTA+TGG | - | tig0019325:166235-166254 | Msa1373010:intron | 50.0% |
| GAGGTTTCCTGTCAAGGTGA+AGG | - | tig0019325:166271-166290 | Msa1373010:intron | 50.0% | |
| ! | GTGAAGGATCTTCTGGCTAC+TGG | - | tig0019325:166287-166306 | Msa1373010:intron | 50.0% |
| ! | TCTTCTGGCTACTGGGATTC+TGG | - | tig0019325:166295-166314 | Msa1373010:intron | 50.0% |
| TGATGTGTAGGCGCGTAAAC+CGG | - | tig0019325:166466-166485 | Msa1373010:intron | 50.0% | |
| TGGGAGTTGTAAGGGGAATC+AGG | - | tig0019325:166541-166560 | Msa1373010:intron | 50.0% | |
| CAGGCAAGTAAATGGAGGGA+TGG | - | tig0019325:166560-166579 | Msa1373010:intron | 50.0% | |
| AGGCATTCATGACATCCCGA+AGG | + | tig0019325:166756-166775 | None:intergenic | 50.0% | |
| TGCCTGTTCAAGTCTTCCGT+TGG | - | tig0019325:166771-166790 | Msa1373010:intron | 50.0% | |
| AGAGGATGCGCTCTTGGTTT+CGG | - | tig0019325:167063-167082 | Msa1373010:intron | 50.0% | |
| ACACTCGGTTCTTCAGTGCA+TGG | - | tig0019325:168009-168028 | Msa1373010:CDS | 50.0% | |
| CTTTCAGCTGTTCAGAACCC+AGG | + | tig0019325:168080-168099 | None:intergenic | 50.0% | |
| !! | CTGGGTTCTGAACAGCTGAA+AGG | - | tig0019325:168078-168097 | Msa1373010:CDS | 50.0% |
| ! | TGAAGAGAGGCTCTGGTAGT+TGG | - | tig0019325:166117-166136 | Msa1373010:CDS | 50.0% |
| !! | CTCTGGTAGTTGGTGGGAAA+AGG | - | tig0019325:166127-166146 | Msa1373010:CDS | 50.0% |
| !! | TTCTGGGGTTTCGCGGATTA+TGG | - | tig0019325:166235-166254 | Msa1373010:intron | 50.0% |
| GAGGTTTCCTGTCAAGGTGA+AGG | - | tig0019325:166271-166290 | Msa1373010:intron | 50.0% | |
| ! | GTGAAGGATCTTCTGGCTAC+TGG | - | tig0019325:166287-166306 | Msa1373010:intron | 50.0% |
| ! | TCTTCTGGCTACTGGGATTC+TGG | - | tig0019325:166295-166314 | Msa1373010:intron | 50.0% |
| TGATGTGTAGGCGCGTAAAC+CGG | - | tig0019325:166466-166485 | Msa1373010:intron | 50.0% | |
| TGGGAGTTGTAAGGGGAATC+AGG | - | tig0019325:166541-166560 | Msa1373010:intron | 50.0% | |
| CAGGCAAGTAAATGGAGGGA+TGG | - | tig0019325:166560-166579 | Msa1373010:intron | 50.0% | |
| AGGCATTCATGACATCCCGA+AGG | + | tig0019325:166756-166775 | None:intergenic | 50.0% | |
| TGCCTGTTCAAGTCTTCCGT+TGG | - | tig0019325:166771-166790 | Msa1373010:intron | 50.0% | |
| AGAGGATGCGCTCTTGGTTT+CGG | - | tig0019325:167063-167082 | Msa1373010:intron | 50.0% | |
| ACACTCGGTTCTTCAGTGCA+TGG | - | tig0019325:168009-168028 | Msa1373010:CDS | 50.0% | |
| CTTTCAGCTGTTCAGAACCC+AGG | + | tig0019325:168080-168099 | None:intergenic | 50.0% | |
| !! | CTGGGTTCTGAACAGCTGAA+AGG | - | tig0019325:168078-168097 | Msa1373010:CDS | 50.0% |
| ! | AGAGAGGCTCTGGTAGTTGG+TGG | - | tig0019325:166120-166139 | Msa1373010:CDS | 55.0% |
| ! | GAGAGGCTCTGGTAGTTGGT+GGG | - | tig0019325:166121-166140 | Msa1373010:CDS | 55.0% |
| !! | ATGGGGTTTCTGGGGTTTCG+CGG | - | tig0019325:166228-166247 | Msa1373010:CDS | 55.0% |
| ! | TCGCGGATTATGGTGAAGCC+TGG | - | tig0019325:166245-166264 | Msa1373010:intron | 55.0% |
| TCTGGCTACTGGGATTCTGG+AGG | - | tig0019325:166298-166317 | Msa1373010:intron | 55.0% | |
| CTGGCTACTGGGATTCTGGA+GGG | - | tig0019325:166299-166318 | Msa1373010:intron | 55.0% | |
| GATGTGTAGGCGCGTAAACC+GGG | - | tig0019325:166467-166486 | Msa1373010:intron | 55.0% | |
| GAAGAACCGAGTGTCTGTGC+TGG | + | tig0019325:168003-168022 | None:intergenic | 55.0% | |
| ! | AGAGAGGCTCTGGTAGTTGG+TGG | - | tig0019325:166120-166139 | Msa1373010:CDS | 55.0% |
| ! | GAGAGGCTCTGGTAGTTGGT+GGG | - | tig0019325:166121-166140 | Msa1373010:CDS | 55.0% |
| !! | ATGGGGTTTCTGGGGTTTCG+CGG | - | tig0019325:166228-166247 | Msa1373010:CDS | 55.0% |
| ! | TCGCGGATTATGGTGAAGCC+TGG | - | tig0019325:166245-166264 | Msa1373010:intron | 55.0% |
| TCTGGCTACTGGGATTCTGG+AGG | - | tig0019325:166298-166317 | Msa1373010:intron | 55.0% | |
| CTGGCTACTGGGATTCTGGA+GGG | - | tig0019325:166299-166318 | Msa1373010:intron | 55.0% | |
| GATGTGTAGGCGCGTAAACC+GGG | - | tig0019325:166467-166486 | Msa1373010:intron | 55.0% | |
| GAAGAACCGAGTGTCTGTGC+TGG | + | tig0019325:168003-168022 | None:intergenic | 55.0% | |
| GGCGCGTAAACCGGGAGAAA+AGG | - | tig0019325:166475-166494 | Msa1373010:intron | 60.0% | |
| GGCGCGTAAACCGGGAGAAA+AGG | - | tig0019325:166475-166494 | Msa1373010:intron | 60.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| tig0019325 | gene | 166116 | 168119 | 166116 | ID=Msa1373010;Name=Msa1373010 |
| tig0019325 | mRNA | 166116 | 168119 | 166116 | ID=Msa1373010-mRNA-1;Parent=Msa1373010;Name=Msa1373010-mRNA-1;_AED=0.18;_eAED=0.18;_QI=0|0|0|1|1|1|4|0|256 |
| tig0019325 | exon | 167883 | 168119 | 167883 | ID=Msa1373010-mRNA-1:exon:3030;Parent=Msa1373010-mRNA-1 |
| tig0019325 | exon | 167364 | 167568 | 167364 | ID=Msa1373010-mRNA-1:exon:3029;Parent=Msa1373010-mRNA-1 |
| tig0019325 | exon | 167076 | 167270 | 167076 | ID=Msa1373010-mRNA-1:exon:3028;Parent=Msa1373010-mRNA-1 |
| tig0019325 | exon | 166116 | 166249 | 166116 | ID=Msa1373010-mRNA-1:exon:3027;Parent=Msa1373010-mRNA-1 |
| tig0019325 | CDS | 167883 | 168119 | 167883 | ID=Msa1373010-mRNA-1:cds;Parent=Msa1373010-mRNA-1 |
| tig0019325 | CDS | 167364 | 167568 | 167364 | ID=Msa1373010-mRNA-1:cds;Parent=Msa1373010-mRNA-1 |
| tig0019325 | CDS | 167076 | 167270 | 167076 | ID=Msa1373010-mRNA-1:cds;Parent=Msa1373010-mRNA-1 |
| tig0019325 | CDS | 166116 | 166249 | 166116 | ID=Msa1373010-mRNA-1:cds;Parent=Msa1373010-mRNA-1 |
| Gene Sequence |
| Protein sequence |
