Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa0003890 | Msa0703360 | 0.803919 | 2.769824e-49 | -8.615850e-47 |
| Msa0021510 | Msa0703360 | 0.825658 | 4.157690e-54 | -8.615850e-47 |
| Msa0036140 | Msa0703360 | 0.803389 | 3.568282e-49 | -8.615850e-47 |
| Msa0045790 | Msa0703360 | 0.818093 | 2.345910e-52 | -8.615850e-47 |
| Msa0046160 | Msa0703360 | 0.818077 | 2.366015e-52 | -8.615850e-47 |
| Msa0054480 | Msa0703360 | 0.811014 | 8.651526e-51 | -8.615850e-47 |
| Msa0080090 | Msa0703360 | 0.821557 | 3.790731e-53 | -8.615850e-47 |
| Msa0084380 | Msa0703360 | 0.812299 | 4.545702e-51 | -8.615850e-47 |
| Msa0114060 | Msa0703360 | 0.800301 | 1.536466e-48 | -8.615850e-47 |
| Msa0607310 | Msa0703360 | 0.802632 | 5.117408e-49 | -8.615850e-47 |
| Msa0625720 | Msa0703360 | 0.814865 | 1.239525e-51 | -8.615850e-47 |
| Msa0629450 | Msa0703360 | 0.811817 | 5.791638e-51 | -8.615850e-47 |
| Msa0661650 | Msa0703360 | 0.828855 | 7.129446e-55 | -8.615850e-47 |
| Msa0663390 | Msa0703360 | 0.801891 | 7.268418e-49 | -8.615850e-47 |
| Msa0679750 | Msa0703360 | 0.816808 | 4.569839e-52 | -8.615850e-47 |
| Msa0680660 | Msa0703360 | 0.813552 | 2.416534e-51 | -8.615850e-47 |
| Msa0681250 | Msa0703360 | 0.839124 | 1.911455e-57 | -8.615850e-47 |
| Msa0681270 | Msa0703360 | 0.837012 | 6.679552e-57 | -8.615850e-47 |
| Msa0701830 | Msa0703360 | 0.990177 | 2.051427e-181 | -8.615850e-47 |
| Msa0703360 | Msa0709010 | 0.922470 | 9.429164e-89 | -8.615850e-47 |
| Msa0703360 | Msa0717890 | 0.809579 | 1.764394e-50 | -8.615850e-47 |
| Msa0703360 | Msa0724210 | 0.815633 | 8.367096e-52 | -8.615850e-47 |
| Msa0703360 | Msa0731940 | 0.835327 | 1.789513e-56 | -8.615850e-47 |
| Msa0703360 | Msa0735170 | 0.800044 | 1.733649e-48 | -8.615850e-47 |
| Msa0703360 | Msa0753720 | 0.802818 | 4.683764e-49 | -8.615850e-47 |
| Msa0703360 | Msa0760130 | 0.804476 | 2.121530e-49 | -8.615850e-47 |
| Msa0703360 | Msa0766630 | 0.811012 | 8.662806e-51 | -8.615850e-47 |
| Msa0703360 | Msa0774160 | 0.933287 | 2.361673e-95 | -8.615850e-47 |
| Msa0703360 | Msa0779320 | 0.805634 | 1.214451e-49 | -8.615850e-47 |
| Msa0703360 | Msa0792540 | 0.800678 | 1.287383e-48 | -8.615850e-47 |
| Msa0703360 | Msa0817460 | 0.815048 | 1.128776e-51 | -8.615850e-47 |
| Msa0703360 | Msa0831110 | 0.808077 | 3.698112e-50 | -8.615850e-47 |
| Msa0703360 | Msa0866520 | 0.800646 | 1.307299e-48 | -8.615850e-47 |
| Msa0703360 | Msa0875290 | 0.801231 | 9.926405e-49 | -8.615850e-47 |
| Msa0703360 | Msa0880950 | 0.827632 | 1.405256e-54 | -8.615850e-47 |
| Msa0703360 | Msa0897330 | 0.811009 | 8.674616e-51 | -8.615850e-47 |
| Msa0703360 | Msa0898750 | 0.803497 | 3.388686e-49 | -8.615850e-47 |
| Msa0703360 | Msa0899980 | 0.811489 | 6.825619e-51 | -8.615850e-47 |
| Msa0703360 | Msa0900620 | 0.809160 | 2.171028e-50 | -8.615850e-47 |
| Msa0703360 | Msa0927310 | 0.804893 | 1.735740e-49 | -8.615850e-47 |
| Msa0703360 | Msa0928130 | 0.802818 | 4.684047e-49 | -8.615850e-47 |
| Msa0703360 | Msa0935670 | 0.804177 | 2.447924e-49 | -8.615850e-47 |
| Msa0703360 | Msa0965360 | 0.823265 | 1.520501e-53 | -8.615850e-47 |
| Msa0703360 | Msa0974070 | 0.808005 | 3.829795e-50 | -8.615850e-47 |
| Msa0703360 | Msa0989360 | 0.811994 | 5.299663e-51 | -8.615850e-47 |
| Msa0703360 | Msa0999290 | 0.801806 | 7.569122e-49 | -8.615850e-47 |
| Msa0703360 | Msa0999870 | 0.814624 | 1.401453e-51 | -8.615850e-47 |
| Msa0703360 | Msa1004840 | 0.828443 | 8.965726e-55 | -8.615850e-47 |
| Msa0703360 | Msa1004970 | 0.807185 | 5.718234e-50 | -8.615850e-47 |
| Msa0703360 | Msa1014540 | 0.809799 | 1.582905e-50 | -8.615850e-47 |
| Msa0703360 | Msa1016320 | 0.800900 | 1.159957e-48 | -8.615850e-47 |
| Msa0703360 | Msa1023950 | 0.809116 | 2.218108e-50 | -8.615850e-47 |
| Msa0703360 | Msa1035480 | 0.831854 | 1.317848e-55 | -8.615850e-47 |
| Msa0703360 | Msa1036610 | 0.808420 | 3.124224e-50 | -8.615850e-47 |
| Msa0703360 | Msa1037780 | 0.817325 | 3.496017e-52 | -8.615850e-47 |
| Msa0703360 | Msa1066670 | 0.814800 | 1.280879e-51 | -8.615850e-47 |
| Msa0703360 | Msa1075540 | 0.827934 | 1.189030e-54 | -8.615850e-47 |
| Msa0703360 | Msa1075650 | 0.823344 | 1.456676e-53 | -8.615850e-47 |
| Msa0703360 | Msa1083840 | 0.829714 | 4.411201e-55 | -8.615850e-47 |
| Msa0703360 | Msa1101090 | 0.813365 | 2.655255e-51 | -8.615850e-47 |
| Msa0703360 | Msa1113170 | 0.807772 | 4.292580e-50 | -8.615850e-47 |
| Msa0703360 | Msa1142020 | 0.800888 | 1.166607e-48 | -8.615850e-47 |
| Msa0703360 | Msa1162780 | 0.821664 | 3.580600e-53 | -8.615850e-47 |
| Msa0703360 | Msa1163090 | 0.828993 | 6.601806e-55 | -8.615850e-47 |
| Msa0703360 | Msa1171710 | 0.800070 | 1.712822e-48 | -8.615850e-47 |
| Msa0703360 | Msa1181910 | 0.802918 | 4.467018e-49 | -8.615850e-47 |
| Msa0703360 | Msa1186020 | 0.800260 | 1.566276e-48 | -8.615850e-47 |
| Msa0703360 | Msa1207220 | 0.801508 | 8.709469e-49 | -8.615850e-47 |
| Msa0703360 | Msa1232700 | 0.804057 | 2.592706e-49 | -8.615850e-47 |
| Msa0703360 | Msa1239920 | 0.802789 | 4.749295e-49 | -8.615850e-47 |
| Msa0703360 | Msa1284680 | 0.813328 | 2.706747e-51 | -8.615850e-47 |
| Msa0703360 | Msa1297230 | 0.810793 | 9.661062e-51 | -8.615850e-47 |
| Msa0703360 | Msa1307560 | 0.807036 | 6.148332e-50 | -8.615850e-47 |
| Msa0703360 | Msa1308870 | 0.812180 | 4.825752e-51 | -8.615850e-47 |
| Msa0703360 | Msa1313280 | 0.852230 | 5.292082e-61 | -8.615850e-47 |
| Msa0703360 | Msa1320410 | 0.804842 | 1.779399e-49 | -8.615850e-47 |
| Msa0703360 | Msa1331000 | 0.813118 | 3.008560e-51 | -8.615850e-47 |
| Msa0703360 | Msa1337670 | 0.802426 | 5.642434e-49 | -8.615850e-47 |
| Msa0703360 | Msa1372980 | 0.804036 | 2.619640e-49 | -8.615850e-47 |
| Msa0703360 | Msa1373010 | 0.812567 | 3.973347e-51 | -8.615850e-47 |
| Msa0703360 | Msa1373030 | 0.819223 | 1.299948e-52 | -8.615850e-47 |
| Msa0703360 | Msa1388970 | 0.807199 | 5.679160e-50 | -8.615850e-47 |
| Msa0703360 | Msa1392240 | 0.807482 | 4.948330e-50 | -8.615850e-47 |
| Msa0703360 | Msa1394380 | 0.813762 | 2.172279e-51 | -8.615850e-47 |
| Msa0703360 | Msa1405030 | 0.805779 | 1.131820e-49 | -8.615850e-47 |
| Msa0703360 | Msa1409700 | 0.824933 | 6.170681e-54 | -8.615850e-47 |
| Msa0703360 | Msa1413610 | 0.813910 | 2.014857e-51 | -8.615850e-47 |
| Msa0703360 | Msa1433810 | 0.807051 | 6.106222e-50 | -8.615850e-47 |
| Msa0703360 | Msa1436480 | 0.822974 | 1.777728e-53 | -8.615850e-47 |
| Msa0703360 | Msa1440560 | 0.820510 | 6.602332e-53 | -8.615850e-47 |
| Msa0703360 | Msa1448560 | 0.807968 | 3.899935e-50 | -8.615850e-47 |
| Msa0703360 | Msa1453320 | 0.808407 | 3.144735e-50 | -8.615850e-47 |
| Msa0703360 | Msa1454620 | 0.802155 | 6.416149e-49 | -8.615850e-47 |
| Msa0703360 | Msa1463900 | 0.841470 | 4.659605e-58 | -8.615850e-47 |
| Msa0703360 | Msa1464810 | 0.801779 | 7.664447e-49 | -8.615850e-47 |
| Msa0703360 | Msa1466540 | 0.802841 | 4.632694e-49 | -8.615850e-47 |
| Msa0198340 | Msa0703360 | 0.806738 | 7.110190e-50 | -8.615850e-47 |
| Msa0211150 | Msa0703360 | 0.803737 | 3.021971e-49 | -8.615850e-47 |
| Msa0212990 | Msa0703360 | 0.836747 | 7.804135e-57 | -8.615850e-47 |
| Msa0216910 | Msa0703360 | 0.817077 | 3.974838e-52 | -8.615850e-47 |
| Msa0219590 | Msa0703360 | 0.802933 | 4.434979e-49 | -8.615850e-47 |
| Msa0225100 | Msa0703360 | 0.801873 | 7.332780e-49 | -8.615850e-47 |
| Msa0225220 | Msa0703360 | 0.820856 | 5.499466e-53 | -8.615850e-47 |
| Msa0367870 | Msa0703360 | 0.814787 | 1.289578e-51 | -8.615850e-47 |
| Msa0386090 | Msa0703360 | 0.809719 | 1.646515e-50 | -8.615850e-47 |
| Msa0424790 | Msa0703360 | 0.800071 | 1.711812e-48 | -8.615850e-47 |
| Msa0425170 | Msa0703360 | 0.802355 | 5.834705e-49 | -8.615850e-47 |
| Msa0440400 | Msa0703360 | 0.833717 | 4.543711e-56 | -8.615850e-47 |
| Msa0464120 | Msa0703360 | 0.800513 | 1.391178e-48 | -8.615850e-47 |
| Msa0464680 | Msa0703360 | 0.805473 | 1.312433e-49 | -8.615850e-47 |
| Msa0267370 | Msa0703360 | 0.818398 | 2.001037e-52 | -8.615850e-47 |
| Msa0296480 | Msa0703360 | 0.801126 | 1.043016e-48 | -8.615850e-47 |
| Msa0325830 | Msa0703360 | 0.813216 | 2.863517e-51 | -8.615850e-47 |
| Msa0326940 | Msa0703360 | 0.984505 | 9.335918e-161 | -8.615850e-47 |
| Msa0330340 | Msa0703360 | 0.825880 | 3.682970e-54 | -8.615850e-47 |
| Msa0342010 | Msa0703360 | 0.805803 | 1.118781e-49 | -8.615850e-47 |
| Msa0358890 | Msa0703360 | 0.803765 | 2.981607e-49 | -8.615850e-47 |
| Msa0363790 | Msa0703360 | 0.802299 | 5.993702e-49 | -8.615850e-47 |
| Msa0516170 | Msa0703360 | 0.801189 | 1.012504e-48 | -8.615850e-47 |
| Msa0518380 | Msa0703360 | 0.806619 | 7.532837e-50 | -8.615850e-47 |
| Msa0529890 | Msa0703360 | 0.815090 | 1.104552e-51 | -8.615850e-47 |
| Msa0531180 | Msa0703360 | 0.833662 | 4.687648e-56 | -8.615850e-47 |
| Msa0532350 | Msa0703360 | 0.812059 | 5.129629e-51 | -8.615850e-47 |
| Msa0553240 | Msa0703360 | 0.813477 | 2.509152e-51 | -8.615850e-47 |
| Msa0569200 | Msa0703360 | 0.805589 | 1.240919e-49 | -8.615850e-47 |
| Msa0574390 | Msa0703360 | 0.800477 | 1.415251e-48 | -8.615850e-47 |
| Msa0585560 | Msa0703360 | 0.809327 | 1.998565e-50 | -8.615850e-47 |
| Msa0600710 | Msa0703360 | 0.801236 | 9.901899e-49 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|
Find 17 sgRNAs with CRISPR-Local
Find 78 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| CAATTTCAGGCGACAGTTTA+AGG | 0.122983 | 4_4:+75249199 | None:intergenic |
| TAATTAATGTATGTGACTTT+TGG | 0.258825 | 4_4:-75248244 | Msa0703360:three_prime_UTR |
| CATTGCTGTAAAACGTGTTT+TGG | 0.309510 | 4_4:+75248329 | None:intergenic |
| TTGAAATTTGAAGAAATAGA+AGG | 0.329500 | 4_4:+75249494 | None:intergenic |
| TAGAAATAGAAGGTAAATGA+TGG | 0.424500 | 4_4:+75249449 | None:intergenic |
| AGAAATTACTCGTCTTCATC+AGG | 0.431687 | 4_4:-75249276 | Msa0703360:five_prime_UTR |
| TTGATTGTTGTTATTGCTGC+AGG | 0.431879 | 4_4:-75249310 | Msa0703360:five_prime_UTR |
| AAGTTTGAGTAATTTAAAGA+AGG | 0.477272 | 4_4:-75248306 | Msa0703360:three_prime_UTR |
| TTGTAGAAAGAATGTAAGAG+AGG | 0.519392 | 4_4:+75249639 | None:intergenic |
| TAGTAATATAGAAGATGAGA+AGG | 0.519700 | 4_4:+75249396 | None:intergenic |
| TGTAGAAAGAATGTAAGAGA+GGG | 0.528156 | 4_4:+75249640 | None:intergenic |
| ATCTTATTTGAAAGATTGAA+AGG | 0.529072 | 4_4:-75248458 | Msa0703360:intron |
| AGGCAATCAATACAACTTAG+TGG | 0.556871 | 4_4:+75248194 | None:intergenic |
| TGAAGAGTGTGTGGGAGAGA+AGG | 0.573340 | 4_4:-75249169 | Msa0703360:intron |
| TTGCCTCAATTATCACGTGA+AGG | 0.577241 | 4_4:-75248177 | Msa0703360:three_prime_UTR |
| CAACCTTCACGTGATAATTG+AGG | 0.587359 | 4_4:+75248174 | None:intergenic |
| GAATACAAACAATTGCAGAA+AGG | 0.599398 | 4_4:-75248419 | Msa0703360:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !!! | GAAATTCAAACATTTTTTTA+AGG | + | chr4_4:75248795-75248814 | None:intergenic | 15.0% |
| !! | AAATAAGATAAATGAGATAA+GGG | + | chr4_4:75249425-75249444 | None:intergenic | 15.0% |
| !!! | GAAATTCAAACATTTTTTTA+AGG | + | chr4_4:75248795-75248814 | None:intergenic | 15.0% |
| !! | AAATAAGATAAATGAGATAA+GGG | + | chr4_4:75249425-75249444 | None:intergenic | 15.0% |
| !! | TTGAAATTTGAAGAAATAGA+AGG | + | chr4_4:75248403-75248422 | None:intergenic | 20.0% |
| !!! | TACACATTTTTAGAAATAGA+AGG | + | chr4_4:75248458-75248477 | None:intergenic | 20.0% |
| !!! | AGTTAAAATCATCTCATTTT+CGG | + | chr4_4:75248662-75248681 | None:intergenic | 20.0% |
| !! | GTTATGAAGAAATAAATATG+AGG | - | chr4_4:75248953-75248972 | Msa0703360:intron | 20.0% |
| !! | CAAATAAGATAAATGAGATA+AGG | + | chr4_4:75249426-75249445 | None:intergenic | 20.0% |
| !!! | ATCTTATTTGAAAGATTGAA+AGG | - | chr4_4:75249436-75249455 | Msa0703360:five_prime_UTR | 20.0% |
| !!! | AGAAACTTTTGAGTAATTTA+CGG | - | chr4_4:75249528-75249547 | Msa0703360:five_prime_UTR | 20.0% |
| !! | AAGTTTGAGTAATTTAAAGA+AGG | - | chr4_4:75249588-75249607 | Msa0703360:five_prime_UTR | 20.0% |
| !!! | TAATTAATGTATGTGACTTT+TGG | - | chr4_4:75249650-75249669 | Msa0703360:five_prime_UTR | 20.0% |
| !! | TTGAAATTTGAAGAAATAGA+AGG | + | chr4_4:75248403-75248422 | None:intergenic | 20.0% |
| !!! | TACACATTTTTAGAAATAGA+AGG | + | chr4_4:75248458-75248477 | None:intergenic | 20.0% |
| !!! | AGTTAAAATCATCTCATTTT+CGG | + | chr4_4:75248662-75248681 | None:intergenic | 20.0% |
| !! | GTTATGAAGAAATAAATATG+AGG | - | chr4_4:75248953-75248972 | Msa0703360:intron | 20.0% |
| !! | CAAATAAGATAAATGAGATA+AGG | + | chr4_4:75249426-75249445 | None:intergenic | 20.0% |
| !!! | ATCTTATTTGAAAGATTGAA+AGG | - | chr4_4:75249436-75249455 | Msa0703360:five_prime_UTR | 20.0% |
| !!! | AGAAACTTTTGAGTAATTTA+CGG | - | chr4_4:75249528-75249547 | Msa0703360:five_prime_UTR | 20.0% |
| !! | AAGTTTGAGTAATTTAAAGA+AGG | - | chr4_4:75249588-75249607 | Msa0703360:five_prime_UTR | 20.0% |
| !!! | TAATTAATGTATGTGACTTT+TGG | - | chr4_4:75249650-75249669 | Msa0703360:five_prime_UTR | 20.0% |
| ! | TAGAAATAGAAGGTAAATGA+TGG | + | chr4_4:75248448-75248467 | None:intergenic | 25.0% |
| ! | TAGTAATATAGAAGATGAGA+AGG | + | chr4_4:75248501-75248520 | None:intergenic | 25.0% |
| ! | TTTGTTTGTAGATCAATGAA+GGG | + | chr4_4:75248890-75248909 | None:intergenic | 25.0% |
| ! | ATCTGTAGATTTAAAAAAGC+AGG | + | chr4_4:75249042-75249061 | None:intergenic | 25.0% |
| !!! | ATTTAAAGAAGGCATCTTTT+TGG | - | chr4_4:75249599-75249618 | Msa0703360:five_prime_UTR | 25.0% |
| ! | TAGAAATAGAAGGTAAATGA+TGG | + | chr4_4:75248448-75248467 | None:intergenic | 25.0% |
| ! | TAGTAATATAGAAGATGAGA+AGG | + | chr4_4:75248501-75248520 | None:intergenic | 25.0% |
| ! | TTTGTTTGTAGATCAATGAA+GGG | + | chr4_4:75248890-75248909 | None:intergenic | 25.0% |
| ! | ATCTGTAGATTTAAAAAAGC+AGG | + | chr4_4:75249042-75249061 | None:intergenic | 25.0% |
| !!! | ATTTAAAGAAGGCATCTTTT+TGG | - | chr4_4:75249599-75249618 | Msa0703360:five_prime_UTR | 25.0% |
| TGTAGAAAGAATGTAAGAGA+GGG | + | chr4_4:75248257-75248276 | None:intergenic | 30.0% | |
| TTGTAGAAAGAATGTAAGAG+AGG | + | chr4_4:75248258-75248277 | None:intergenic | 30.0% | |
| !!! | GAGTTTTAGCTAAAATGAGA+AGG | + | chr4_4:75248307-75248326 | None:intergenic | 30.0% |
| ! | TCTTCAGTTTTTGCAATTTC+AGG | + | chr4_4:75248711-75248730 | None:intergenic | 30.0% |
| ! | CTTTGTTTGTAGATCAATGA+AGG | + | chr4_4:75248891-75248910 | None:intergenic | 30.0% |
| AAAGAAAAGAGACACAAATG+AGG | - | chr4_4:75248907-75248926 | Msa0703360:intron | 30.0% | |
| GAATACAAACAATTGCAGAA+AGG | - | chr4_4:75249475-75249494 | Msa0703360:five_prime_UTR | 30.0% | |
| TGTAGAAAGAATGTAAGAGA+GGG | + | chr4_4:75248257-75248276 | None:intergenic | 30.0% | |
| TTGTAGAAAGAATGTAAGAG+AGG | + | chr4_4:75248258-75248277 | None:intergenic | 30.0% | |
| !!! | GAGTTTTAGCTAAAATGAGA+AGG | + | chr4_4:75248307-75248326 | None:intergenic | 30.0% |
| ! | TCTTCAGTTTTTGCAATTTC+AGG | + | chr4_4:75248711-75248730 | None:intergenic | 30.0% |
| ! | CTTTGTTTGTAGATCAATGA+AGG | + | chr4_4:75248891-75248910 | None:intergenic | 30.0% |
| AAAGAAAAGAGACACAAATG+AGG | - | chr4_4:75248907-75248926 | Msa0703360:intron | 30.0% | |
| GAATACAAACAATTGCAGAA+AGG | - | chr4_4:75249475-75249494 | Msa0703360:five_prime_UTR | 30.0% | |
| ! | TTGATTGTTGTTATTGCTGC+AGG | - | chr4_4:75248584-75248603 | Msa0703360:intron | 35.0% |
| AGAAATTACTCGTCTTCATC+AGG | - | chr4_4:75248618-75248637 | Msa0703360:intron | 35.0% | |
| TGCTCTATAAATGTTGTTGC+AGG | - | chr4_4:75248843-75248862 | Msa0703360:intron | 35.0% | |
| GTTGTTGCAGGATAATGTAA+TGG | - | chr4_4:75248855-75248874 | Msa0703360:intron | 35.0% | |
| ! | CATTGCTGTAAAACGTGTTT+TGG | + | chr4_4:75249568-75249587 | None:intergenic | 35.0% |
| !! | TGTATGTGACTTTTGGAGAA+TGG | - | chr4_4:75249657-75249676 | Msa0703360:five_prime_UTR | 35.0% |
| AGGCAATCAATACAACTTAG+TGG | + | chr4_4:75249703-75249722 | None:intergenic | 35.0% | |
| ! | TTGATTGTTGTTATTGCTGC+AGG | - | chr4_4:75248584-75248603 | Msa0703360:intron | 35.0% |
| AGAAATTACTCGTCTTCATC+AGG | - | chr4_4:75248618-75248637 | Msa0703360:intron | 35.0% | |
| TGCTCTATAAATGTTGTTGC+AGG | - | chr4_4:75248843-75248862 | Msa0703360:intron | 35.0% | |
| GTTGTTGCAGGATAATGTAA+TGG | - | chr4_4:75248855-75248874 | Msa0703360:intron | 35.0% | |
| ! | CATTGCTGTAAAACGTGTTT+TGG | + | chr4_4:75249568-75249587 | None:intergenic | 35.0% |
| !! | TGTATGTGACTTTTGGAGAA+TGG | - | chr4_4:75249657-75249676 | Msa0703360:five_prime_UTR | 35.0% |
| AGGCAATCAATACAACTTAG+TGG | + | chr4_4:75249703-75249722 | None:intergenic | 35.0% | |
| CAATTTCAGGCGACAGTTTA+AGG | + | chr4_4:75248698-75248717 | None:intergenic | 40.0% | |
| ! | TGCAAAAACTGAAGAGTGTG+TGG | - | chr4_4:75248716-75248735 | Msa0703360:intron | 40.0% |
| ! | GCAAAAACTGAAGAGTGTGT+GGG | - | chr4_4:75248717-75248736 | Msa0703360:intron | 40.0% |
| TTTATAGAGCAGAGAGACAG+TGG | + | chr4_4:75248834-75248853 | None:intergenic | 40.0% | |
| TTGCCTCAATTATCACGTGA+AGG | - | chr4_4:75249717-75249736 | Msa0703360:five_prime_UTR | 40.0% | |
| CAACCTTCACGTGATAATTG+AGG | + | chr4_4:75249723-75249742 | None:intergenic | 40.0% | |
| CAATTTCAGGCGACAGTTTA+AGG | + | chr4_4:75248698-75248717 | None:intergenic | 40.0% | |
| ! | TGCAAAAACTGAAGAGTGTG+TGG | - | chr4_4:75248716-75248735 | Msa0703360:intron | 40.0% |
| ! | GCAAAAACTGAAGAGTGTGT+GGG | - | chr4_4:75248717-75248736 | Msa0703360:intron | 40.0% |
| TTTATAGAGCAGAGAGACAG+TGG | + | chr4_4:75248834-75248853 | None:intergenic | 40.0% | |
| TTGCCTCAATTATCACGTGA+AGG | - | chr4_4:75249717-75249736 | Msa0703360:five_prime_UTR | 40.0% | |
| CAACCTTCACGTGATAATTG+AGG | + | chr4_4:75249723-75249742 | None:intergenic | 40.0% | |
| !! | TTTATATGATAAAAAATATT+TGG | - | chr4_4:75249242-75249261 | Msa0703360:exon | 5.0% |
| !! | TTTATATGATAAAAAATATT+TGG | - | chr4_4:75249242-75249261 | Msa0703360:exon | 5.0% |
| ! | TGAAGAGTGTGTGGGAGAGA+AGG | - | chr4_4:75248725-75248744 | Msa0703360:intron | 50.0% |
| TAGAGCAGAGAGACAGTGGT+TGG | + | chr4_4:75248830-75248849 | None:intergenic | 50.0% | |
| ! | TGAAGAGTGTGTGGGAGAGA+AGG | - | chr4_4:75248725-75248744 | Msa0703360:intron | 50.0% |
| TAGAGCAGAGAGACAGTGGT+TGG | + | chr4_4:75248830-75248849 | None:intergenic | 50.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr4_4 | gene | 75248167 | 75249749 | 75248167 | ID=Msa0703360;Name=Msa0703360 |
| chr4_4 | mRNA | 75248167 | 75249749 | 75248167 | ID=Msa0703360-mRNA-1;Parent=Msa0703360;Name=Msa0703360-mRNA-1;_AED=0.10;_eAED=0.10;_QI=503|0.5|0.66|1|0|0|3|206|58 |
| chr4_4 | exon | 75248167 | 75248466 | 75248167 | ID=Msa0703360-mRNA-1:exon:23576;Parent=Msa0703360-mRNA-1 |
| chr4_4 | exon | 75249046 | 75249051 | 75249046 | ID=Msa0703360-mRNA-1:exon:23575;Parent=Msa0703360-mRNA-1 |
| chr4_4 | exon | 75249170 | 75249749 | 75249170 | ID=Msa0703360-mRNA-1:exon:23574;Parent=Msa0703360-mRNA-1 |
| chr4_4 | five_prime_UTR | 75249247 | 75249749 | 75249247 | ID=Msa0703360-mRNA-1:five_prime_utr;Parent=Msa0703360-mRNA-1 |
| chr4_4 | CDS | 75249170 | 75249246 | 75249170 | ID=Msa0703360-mRNA-1:cds;Parent=Msa0703360-mRNA-1 |
| chr4_4 | CDS | 75249046 | 75249051 | 75249046 | ID=Msa0703360-mRNA-1:cds;Parent=Msa0703360-mRNA-1 |
| chr4_4 | CDS | 75248373 | 75248466 | 75248373 | ID=Msa0703360-mRNA-1:cds;Parent=Msa0703360-mRNA-1 |
| chr4_4 | three_prime_UTR | 75248167 | 75248372 | 75248167 | ID=Msa0703360-mRNA-1:three_prime_utr;Parent=Msa0703360-mRNA-1 |
| Gene Sequence |
| Protein sequence |
