AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar zhongmu-4 / Msa0173660

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0173660 MtrunA17_Chr1g0193801 96.907 388 9 1 1 385 1 388 0.0 783
Msa0173660 MtrunA17_Chr7g0270891 63.077 390 88 16 1 366 1 358 5.88e-150 428
Msa0173660 MtrunA17_Chr1g0193371 47.750 400 158 12 1 383 1 366 1.97e-96 292
Msa0173660 MtrunA17_Chr4g0058631 84.733 131 20 0 1 131 1 131 5.85e-82 254
Msa0173660 MtrunA17_Chr7g0271241 84.173 139 22 0 1 139 1 139 1.05e-76 242
Msa0173660 MtrunA17_Chr3g0117091 71.523 151 40 1 1 151 1 148 9.56e-74 233
Msa0173660 MtrunA17_Chr1g0211161 78.740 127 27 0 3 129 4 130 1.65e-72 226
Msa0173660 MtrunA17_Chr8g0342521 75.610 123 30 0 1 123 1 123 5.33e-67 216
Msa0173660 MtrunA17_Chr2g0330041 69.925 133 40 0 1 133 1 133 2.61e-66 215
Msa0173660 MtrunA17_Chr8g0342541 74.797 123 31 0 1 123 1 123 3.09e-66 214
Msa0173660 MtrunA17_Chr2g0309911 69.231 130 39 1 1 130 1 129 1.49e-64 208
Msa0173660 MtrunA17_Chr3g0115821 64.394 132 47 0 1 132 1 132 2.41e-61 201
Msa0173660 MtrunA17_Chr4g0039971 67.188 128 42 0 1 128 2 129 5.07e-61 200
Msa0173660 MtrunA17_Chr6g0453471 67.969 128 41 0 1 128 1 128 5.77e-61 200
Msa0173660 MtrunA17_Chr8g0387421 69.492 118 36 0 1 118 1 118 7.92e-61 199
Msa0173660 MtrunA17_Chr8g0385321 65.152 132 46 0 1 132 1 132 1.42e-60 198
Msa0173660 MtrunA17_Chr7g0217741 67.176 131 43 0 1 131 1 131 1.86e-60 197
Msa0173660 MtrunA17_Chr4g0042671 67.969 128 41 0 1 128 1 128 1.97e-60 200
Msa0173660 MtrunA17_Chr8g0342481 75.214 117 28 1 1 116 1 117 2.07e-60 200
Msa0173660 MtrunA17_Chr4g0037141 62.121 132 50 0 1 132 1 132 6.20e-60 195
Msa0173660 MtrunA17_Chr5g0397231 73.636 110 29 0 1 110 1 110 2.09e-59 196
Msa0173660 MtrunA17_Chr3g0131121 61.832 131 50 0 1 131 1 131 3.92e-58 191
Msa0173660 MtrunA17_Chr5g0410961 62.595 131 49 0 1 131 1 131 5.18e-58 192
Msa0173660 MtrunA17_Chr5g0395281 68.333 120 38 0 12 131 12 131 8.62e-58 190
Msa0173660 MtrunA17_Chr2g0281071 65.116 129 44 1 1 128 1 129 1.47e-57 191
Msa0173660 MtrunA17_Chr3g0110351 65.385 130 45 0 1 130 1 130 3.89e-57 189
Msa0173660 MtrunA17_Chr1g0203411 67.797 118 38 0 1 118 1 118 4.51e-57 188
Msa0173660 MtrunA17_Chr6g0452271 59.848 132 53 0 1 132 1 132 5.08e-57 189
Msa0173660 MtrunA17_Chr8g0349261 66.667 132 42 2 1 130 1 132 5.25e-57 188
Msa0173660 MtrunA17_Chr4g0048511 64.341 129 45 1 1 128 1 129 5.57e-57 190
Msa0173660 MtrunA17_Chr5g0434571 64.615 130 46 0 1 130 37 166 5.58e-57 190
Msa0173660 MtrunA17_Chr3g0088461 76.147 109 26 0 9 117 19 127 7.04e-57 189
Msa0173660 MtrunA17_Chr5g0435101 62.400 125 47 0 3 127 2 126 8.53e-57 185
Msa0173660 MtrunA17_Chr3g0103281 64.394 132 47 0 1 132 1 132 8.85e-57 188
Msa0173660 MtrunA17_Chr2g0323411 65.625 128 44 0 1 128 1 128 1.19e-56 188
Msa0173660 MtrunA17_Chr4g0057031 62.595 131 49 0 1 131 1 131 1.43e-56 186
Msa0173660 MtrunA17_Chr4g0032401 72.321 112 31 0 11 122 16 127 6.82e-56 186
Msa0173660 MtrunA17_Chr7g0228891 44.681 235 111 5 1 235 1 216 1.49e-55 184
Msa0173660 MtrunA17_Chr2g0328771 74.528 106 27 0 12 117 20 125 1.52e-55 185
Msa0173660 MtrunA17_Chr7g0274581 64.407 118 42 0 1 118 1 118 4.66e-54 177
Msa0173660 MtrunA17_Chr7g0261281 51.724 174 63 2 1 174 1 153 1.36e-53 179
Msa0173660 MtrunA17_Chr4g0044421 61.905 126 48 0 1 126 1 126 2.60e-53 175
Msa0173660 MtrunA17_Chr1g0203441 69.748 119 35 1 9 127 10 127 1.55e-52 176
Msa0173660 MtrunA17_Chr1g0187761 66.102 118 40 0 1 118 1 118 6.04e-52 174
Msa0173660 MtrunA17_Chr3g0121241 62.097 124 47 0 6 129 36 159 1.55e-51 174
Msa0173660 MtrunA17_Chr1g0167661 65.517 116 40 0 1 116 1 116 2.93e-51 172
Msa0173660 MtrunA17_Chr6g0470971 68.644 118 36 1 9 125 11 128 3.15e-51 172
Msa0173660 MtrunA17_Chr5g0417821 63.866 119 43 0 12 130 7 125 7.27e-51 172
Msa0173660 MtrunA17_Chr1g0167691 64.655 116 41 0 1 116 1 116 1.37e-50 170
Msa0173660 MtrunA17_Chr4g0022931 52.778 144 68 0 5 148 6 149 3.23e-49 167
Msa0173660 MtrunA17_Chr2g0311221 65.138 109 38 0 2 110 4 112 3.85e-49 169
Msa0173660 MtrunA17_Chr2g0323351 62.931 116 43 0 1 116 1 116 5.14e-49 166
Msa0173660 MtrunA17_Chr8g0342511 79.310 87 18 0 1 87 1 87 9.96e-49 160
Msa0173660 MtrunA17_Chr8g0342531 78.652 89 19 0 1 89 1 89 1.99e-48 161
Msa0173660 MtrunA17_Chr8g0346561 60.169 118 47 0 1 118 1 118 5.15e-48 165
Msa0173660 MtrunA17_Chr4g0070611 59.829 117 47 0 1 117 1 117 7.97e-48 164
Msa0173660 MtrunA17_Chr4g0068061 63.793 116 42 0 1 116 1 116 1.08e-47 165
Msa0173660 MtrunA17_Chr4g0022901 63.964 111 40 0 5 115 6 116 1.08e-47 163
Msa0173660 MtrunA17_Chr1g0151941 46.707 167 82 4 1 166 1 161 1.56e-47 162
Msa0173660 MtrunA17_Chr4g0070641 59.829 117 47 0 1 117 1 117 2.79e-47 159
Msa0173660 MtrunA17_Chr7g0275911 58.974 117 48 0 1 117 1 117 8.78e-47 160
Msa0173660 MtrunA17_Chr1g0152011 60.833 120 46 1 1 119 1 120 3.28e-46 161
Msa0173660 MtrunA17_Chr1g0194951 62.931 116 43 0 1 116 1 116 1.02e-45 160
Msa0173660 MtrunA17_Chr4g0022911 58.621 116 47 1 1 115 1 116 1.23e-45 158
Msa0173660 MtrunA17_Chr4g0028311 61.538 117 44 1 1 116 1 117 1.24e-45 159
Msa0173660 MtrunA17_Chr3g0135311 58.974 117 47 1 1 116 1 117 5.06e-45 158
Msa0173660 MtrunA17_Chr5g0400821 59.167 120 48 1 1 119 1 120 6.54e-45 157
Msa0173660 MtrunA17_Chr8g0342461 73.333 90 23 1 1 89 1 90 1.28e-44 150
Msa0173660 MtrunA17_Chr2g0327351 63.063 111 40 1 1 110 1 111 1.47e-44 156
Msa0173660 MtrunA17_Chr7g0217221 55.932 118 52 0 1 118 1 118 2.89e-44 154
Msa0173660 MtrunA17_Chr8g0342471 72.222 90 24 1 1 89 1 90 6.82e-44 149
Msa0173660 MtrunA17_Chr4g0054391 61.818 110 41 1 1 109 1 110 9.24e-44 153
Msa0173660 MtrunA17_Chr4g0060721 50.350 143 62 2 1 137 2 141 1.42e-43 154
Msa0173660 MtrunA17_Chr7g0264641 57.265 117 49 1 1 116 1 117 3.85e-43 151
Msa0173660 MtrunA17_Chr7g0254411 54.400 125 55 1 1 123 1 125 7.11e-43 152
Msa0173660 MtrunA17_Chr7g0247131 69.663 89 27 0 44 132 10 98 1.26e-42 150
Msa0173660 MtrunA17_Chr7g0269831 56.835 139 59 1 1 138 1 139 1.36e-42 152
Msa0173660 MtrunA17_Chr4g0022881 61.321 106 41 0 9 114 9 114 2.10e-42 148
Msa0173660 MtrunA17_Chr3g0092401 55.932 118 52 0 1 118 2 119 2.11e-42 150
Msa0173660 MtrunA17_Chr3g0099131 62.617 107 40 0 12 118 41 147 5.04e-42 154
Msa0173660 MtrunA17_Chr7g0228231 55.000 120 52 1 1 118 1 120 3.30e-41 144
Msa0173660 MtrunA17_Chr4g0072751 58.559 111 45 1 1 110 1 111 3.56e-41 148
Msa0173660 MtrunA17_Chr1g0154031 47.712 153 68 2 12 154 76 226 3.90e-41 149
Msa0173660 MtrunA17_Chr4g0022891 43.605 172 87 2 9 170 9 180 4.14e-41 145
Msa0173660 MtrunA17_Chr6g0453211 57.273 110 47 0 1 110 1 110 4.63e-41 147
Msa0173660 MtrunA17_Chr8g0354661 62.264 106 40 0 12 117 37 142 6.76e-41 151
Msa0173660 MtrunA17_Chr6g0450101 58.333 108 45 0 11 118 13 120 1.35e-40 142
Msa0173660 MtrunA17_Chr1g0209661 50.407 123 61 0 11 133 26 148 1.58e-40 145
Msa0173660 MtrunA17_Chr6g0487491 54.839 124 47 2 1 115 1 124 2.78e-40 143
Msa0173660 MtrunA17_Chr4g0055981 59.813 107 43 0 9 115 52 158 3.38e-40 142
Msa0173660 MtrunA17_Chr1g0186061 57.658 111 47 0 5 115 13 123 4.86e-40 142
Msa0173660 MtrunA17_Chr1g0180391 54.135 133 54 2 12 143 19 145 1.38e-39 140
Msa0173660 MtrunA17_Chr3g0080861 57.547 106 45 0 12 117 37 142 1.85e-39 147
Msa0173660 MtrunA17_Chr8g0343831 55.455 110 49 0 10 119 6 115 2.12e-39 140
Msa0173660 MtrunA17_Chr1g0168661 55.263 114 51 0 4 117 13 126 3.94e-39 140
Msa0173660 MtrunA17_Chr4g0042611 62.500 88 33 0 1 88 1 88 1.73e-37 130
Msa0173660 MtrunA17_Chr7g0240821 60.000 100 40 0 17 116 6 105 3.23e-37 134
Msa0173660 MtrunA17_Chr2g0322521 60.377 106 42 0 12 117 29 134 3.85e-37 138
Msa0173660 MtrunA17_Chr5g0434831 58.095 105 44 0 12 116 7 111 4.78e-37 132
Msa0173660 MtrunA17_Chr5g0434931 52.727 110 52 0 12 121 35 144 5.54e-37 135
Msa0173660 MtrunA17_Chr1g0194301 53.153 111 52 0 12 122 33 143 5.95e-37 135
Msa0173660 MtrunA17_Chr5g0434911 53.636 110 51 0 7 116 16 125 7.51e-37 135
Msa0173660 MtrunA17_Chr1g0194291 56.075 107 47 0 12 118 21 127 9.86e-37 134
Msa0173660 MtrunA17_Chr1g0192411 57.009 107 46 0 11 117 11 117 4.02e-36 136
Msa0173660 MtrunA17_Chr7g0220341 53.636 110 49 1 12 119 25 134 3.40e-35 130
Msa0173660 MtrunA17_Chr8g0360111 57.426 101 43 0 12 112 25 125 3.43e-35 130
Msa0173660 MtrunA17_Chr5g0434841 55.238 105 47 0 12 116 20 124 4.22e-35 131
Msa0173660 MtrunA17_Chr2g0327821 34.538 249 128 4 9 254 3 219 5.51e-35 129
Msa0173660 MtrunA17_Chr2g0294811 62.500 88 33 0 1 88 1 88 8.65e-35 124
Msa0173660 MtrunA17_Chr7g0228991 54.286 105 48 0 12 116 29 133 1.21e-34 129
Msa0173660 MtrunA17_Chr4g0013361 48.936 141 66 4 12 149 10 147 1.71e-34 129
Msa0173660 MtrunA17_Chr8g0334881 53.636 110 50 1 9 117 7 116 2.39e-34 129
Msa0173660 MtrunA17_Chr5g0440781 50.893 112 53 2 13 123 13 123 7.87e-34 124
Msa0173660 MtrunA17_Chr4g0030881 50.877 114 49 1 13 119 8 121 1.57e-33 125
Msa0173660 MtrunA17_Chr5g0440761 50.893 112 53 2 13 123 13 123 3.11e-33 125
Msa0173660 MtrunA17_Chr5g0441141 50.893 112 53 2 13 123 13 123 3.31e-33 125
Msa0173660 MtrunA17_Chr2g0293911 54.054 111 51 0 12 122 24 134 2.09e-32 124
Msa0173660 MtrunA17_Chr4g0068921 54.054 111 51 0 12 122 24 134 4.27e-32 119
Msa0173660 MtrunA17_Chr5g0395221 65.000 80 28 0 9 88 9 88 8.30e-32 115
Msa0173660 MtrunA17_Chr4g0008551 46.154 156 73 5 14 165 38 186 1.92e-31 122
Msa0173660 MtrunA17_Chr2g0323321 61.728 81 31 0 12 92 11 91 3.26e-31 114
Msa0173660 MtrunA17_Chr3g0093811 46.763 139 70 1 44 178 14 152 6.11e-31 119
Msa0173660 MtrunA17_Chr5g0441131 44.030 134 73 2 13 145 10 142 7.04e-31 116
Msa0173660 MtrunA17_Chr3g0099141 59.036 83 34 0 12 94 40 122 1.23e-30 114
Msa0173660 MtrunA17_Chr4g0053431 52.941 102 47 1 14 115 5 105 2.65e-28 112
Msa0173660 MtrunA17_Chr5g0429661 46.154 104 55 1 12 115 120 222 3.39e-28 113
Msa0173660 MtrunA17_Chr5g0401731 48.276 116 59 1 14 129 15 129 3.11e-27 110
Msa0173660 MtrunA17_Chr6g0454921 47.748 111 57 1 14 124 15 124 5.05e-26 103
Msa0173660 MtrunA17_Chr7g0238631 40.719 167 85 5 11 170 110 269 6.02e-26 109
Msa0173660 MtrunA17_Chr3g0133601 50.000 102 50 1 14 115 37 137 6.32e-25 101
Msa0173660 MtrunA17_Chr3g0139671 47.170 106 55 1 11 116 82 186 9.51e-25 106
Msa0173660 MtrunA17_Chr6g0453751 54.839 93 33 2 12 95 20 112 1.08e-24 98.2
Msa0173660 MtrunA17_Chr3g0117511 35.329 167 97 5 14 176 183 342 1.80e-24 104
Msa0173660 MtrunA17_Chr6g0480581 41.379 116 66 2 14 129 4 117 2.86e-24 100
Msa0173660 MtrunA17_Chr7g0229101 60.000 70 28 0 44 113 4 73 5.90e-24 98.6
Msa0173660 MtrunA17_Chr4g0058991 41.071 112 63 2 9 119 204 313 6.07e-24 102
Msa0173660 MtrunA17_Chr5g0434901 60.294 68 27 0 46 113 7 74 8.79e-24 95.1
Msa0173660 MtrunA17_Chr1g0157731 45.283 106 57 1 11 116 88 192 1.01e-23 103
Msa0173660 MtrunA17_Chr7g0229131 57.746 71 30 0 44 114 4 74 3.13e-23 95.5
Msa0173660 MtrunA17_Chr5g0417621 40.367 109 64 1 11 119 131 238 3.66e-23 100
Msa0173660 MtrunA17_Chr6g0460661 42.453 106 58 2 14 118 16 119 3.93e-23 94.7
Msa0173660 MtrunA17_Chr4g0042501 41.509 106 61 1 14 119 105 209 4.38e-23 100
Msa0173660 MtrunA17_Chr5g0437321 48.485 99 50 1 14 112 19 116 4.97e-23 97.8
Msa0173660 MtrunA17_Chr7g0228531 39.623 106 62 2 14 119 220 323 6.25e-22 96.7
Msa0173660 MtrunA17_Chr5g0425591 48.810 84 42 1 13 95 10 93 8.52e-22 89.0
Msa0173660 MtrunA17_Chr3g0125801 43.925 107 57 2 14 119 16 120 9.44e-22 94.4
Msa0173660 MtrunA17_Chr5g0397841 45.918 98 52 1 12 109 108 204 1.04e-21 96.7
Msa0173660 MtrunA17_Chr6g0460671 40.952 105 61 1 14 118 99 202 1.68e-21 94.7
Msa0173660 MtrunA17_Chr7g0228401 45.977 87 46 1 25 111 290 375 2.70e-21 95.5
Msa0173660 MtrunA17_Chr1g0177901 38.346 133 66 4 25 149 5 129 2.80e-21 91.3
Msa0173660 MtrunA17_Chr7g0254261 39.344 122 73 1 8 129 83 203 2.19e-20 91.3
Msa0173660 MtrunA17_Chr7g0228481 39.091 110 62 3 14 120 220 327 5.10e-20 91.3
Msa0173660 MtrunA17_Chr7g0238651 37.069 116 65 2 17 124 10 125 2.97e-19 88.2
Msa0173660 MtrunA17_Chr7g0233061 36.792 106 63 3 14 119 180 281 5.47e-17 81.6
Msa0173660 MtrunA17_Chr5g0416341 36.190 105 66 1 17 121 29 132 7.54e-17 82.0
Msa0173660 MtrunA17_Chr1g0193901 49.438 89 43 2 10 96 9 97 1.05e-15 72.8
Msa0173660 MtrunA17_Chr1g0193891 49.438 89 43 2 10 96 9 97 1.05e-15 72.8
Msa0173660 MtrunA17_Chr1g0193871 49.438 89 43 2 10 96 9 97 1.05e-15 72.8
Msa0173660 MtrunA17_Chr1g0193881 49.438 89 43 2 10 96 9 97 1.05e-15 72.8
Msa0173660 MtrunA17_Chr8g0362231 35.354 99 63 1 17 115 25 122 2.21e-15 77.4
Msa0173660 MtrunA17_Chr5g0395231 62.745 51 19 0 78 128 5 55 8.12e-15 73.6
Msa0173660 MtrunA17_Chr4g0042621 77.500 40 9 0 89 128 15 54 5.21e-13 69.3
Msa0173660 MtrunA17_Chr3g0104491 37.931 87 47 3 53 132 1 87 2.82e-12 66.6
Msa0173660 MtrunA17_Chr5g0434871 55.814 43 19 0 74 116 2 44 8.99e-12 60.5
Msa0173660 MtrunA17_Chr3g0145551 62.500 40 15 0 92 131 2 41 2.58e-11 59.3
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0173660 AT4G01680.3 84.868 152 22 1 1 152 1 151 4.01e-92 276
Msa0173660 AT4G01680.1 84.868 152 22 1 1 152 1 151 2.60e-91 278
Msa0173660 AT1G57560.1 50.865 289 130 6 1 278 1 288 1.10e-88 270
Msa0173660 AT4G01680.2 78.659 164 22 2 1 152 1 163 9.49e-88 269
Msa0173660 AT1G09540.1 40.964 415 161 12 1 383 1 363 1.40e-86 267
Msa0173660 AT1G57560.2 87.970 133 16 0 1 133 1 133 5.78e-85 259
Msa0173660 AT5G26660.1 86.822 129 17 0 1 129 1 129 9.83e-83 256
Msa0173660 AT3G12720.1 70.635 126 36 1 1 126 12 136 7.29e-66 212
Msa0173660 AT3G13890.2 76.724 116 27 0 1 116 1 116 2.75e-65 212
Msa0173660 AT3G61250.1 68.992 129 40 0 1 129 1 129 7.82e-63 204
Msa0173660 AT1G63910.1 67.969 128 41 0 1 128 1 128 9.69e-63 206
Msa0173660 AT3G02940.2 64.885 131 46 0 1 131 1 131 3.18e-62 202
Msa0173660 AT3G13890.1 71.200 125 27 1 1 116 1 125 5.14e-62 204
Msa0173660 AT3G02940.1 64.885 131 46 0 1 131 1 131 7.35e-62 202
Msa0173660 AT3G02940.3 64.885 131 46 0 1 131 1 131 7.35e-62 202
Msa0173660 AT5G16770.4 64.885 131 46 0 1 131 1 131 1.25e-61 201
Msa0173660 AT5G16770.3 64.885 131 46 0 1 131 1 131 1.25e-61 201
Msa0173660 AT5G16770.1 64.885 131 46 0 1 131 1 131 2.78e-61 201
Msa0173660 AT5G16770.2 64.885 131 46 0 1 131 1 131 2.78e-61 201
Msa0173660 AT5G15310.2 67.176 131 43 0 1 131 1 131 1.18e-60 198
Msa0173660 AT5G15310.1 67.176 131 43 0 1 131 1 131 1.37e-60 199
Msa0173660 AT5G15310.4 67.176 131 43 0 1 131 1 131 2.06e-60 196
Msa0173660 AT3G01140.2 68.504 127 40 0 1 127 1 127 4.19e-60 198
Msa0173660 AT4G34990.1 57.237 152 64 1 1 151 1 152 5.51e-60 195
Msa0173660 AT5G16600.1 63.380 142 52 0 1 142 1 142 2.05e-59 196
Msa0173660 AT2G16720.1 62.595 131 49 0 1 131 1 131 5.19e-59 193
Msa0173660 AT1G66230.1 61.806 144 55 0 1 144 1 144 5.57e-59 193
Msa0173660 AT4G05100.1 65.116 129 44 1 1 128 1 129 6.31e-59 194
Msa0173660 AT1G34670.1 63.636 132 48 0 1 132 1 132 1.11e-58 195
Msa0173660 AT4G21440.1 64.844 128 45 0 1 128 1 128 1.14e-58 194
Msa0173660 AT4G38620.1 54.658 161 62 2 1 158 1 153 1.52e-58 192
Msa0173660 AT4G09460.1 52.047 171 82 0 1 171 1 171 5.83e-58 189
Msa0173660 AT4G28110.1 64.062 128 46 0 1 128 1 128 5.93e-58 191
Msa0173660 AT5G60890.1 57.971 138 58 0 1 138 1 138 7.91e-58 191
Msa0173660 AT5G56110.1 64.394 132 47 0 1 132 1 132 1.06e-57 191
Msa0173660 AT4G12350.1 62.879 132 49 0 1 132 1 132 1.50e-57 189
Msa0173660 AT5G10280.1 62.121 132 50 0 1 132 1 132 1.85e-57 191
Msa0173660 AT5G65230.1 64.122 131 47 0 1 131 1 131 2.37e-57 190
Msa0173660 AT3G01140.1 68.852 122 38 0 6 127 49 170 3.09e-57 192
Msa0173660 AT4G22680.1 62.595 131 49 0 1 131 1 131 3.52e-57 188
Msa0173660 AT1G22640.1 61.069 131 51 0 1 131 1 131 6.09e-57 187
Msa0173660 AT5G61420.2 60.448 134 53 0 1 134 1 134 1.13e-56 190
Msa0173660 AT5G07690.1 59.712 139 56 0 1 139 1 139 2.17e-56 188
Msa0173660 AT4G17785.2 64.341 129 45 1 1 128 1 129 8.05e-56 187
Msa0173660 AT4G17785.1 64.341 129 45 1 1 128 1 129 9.63e-56 187
Msa0173660 AT5G12870.1 72.477 109 30 0 10 118 16 124 2.94e-55 183
Msa0173660 AT5G14340.1 51.765 170 79 1 1 170 13 179 4.64e-55 182
Msa0173660 AT3G08500.1 70.940 117 31 1 4 117 19 135 7.13e-55 184
Msa0173660 AT1G74430.1 63.281 128 47 0 1 128 1 128 8.64e-55 182
Msa0173660 AT5G07700.1 50.279 179 74 2 1 164 1 179 1.05e-54 184
Msa0173660 AT5G07700.2 50.279 179 74 2 1 164 1 179 1.05e-54 184
Msa0173660 AT1G18570.1 61.069 131 50 1 1 130 1 131 1.25e-54 184
Msa0173660 AT1G35515.1 59.542 131 53 0 1 131 1 131 3.90e-54 178
Msa0173660 AT3G28470.1 61.364 132 51 0 1 132 1 132 1.99e-53 180
Msa0173660 AT1G74080.1 59.690 129 52 0 1 129 1 129 3.84e-53 179
Msa0173660 AT5G54230.1 61.719 128 49 0 1 128 1 128 5.07e-53 179
Msa0173660 AT3G23250.1 64.655 116 41 0 1 116 1 116 5.98e-53 177
Msa0173660 AT2G31180.1 50.000 174 86 1 1 173 1 174 6.07e-53 176
Msa0173660 AT1G79180.1 67.521 117 38 0 2 118 4 120 1.65e-52 177
Msa0173660 AT3G13540.1 62.097 124 47 0 6 129 17 140 3.69e-52 174
Msa0173660 AT5G26660.2 83.333 90 15 0 40 129 9 98 1.09e-50 173
Msa0173660 AT1G06180.1 64.407 118 42 0 1 118 1 118 1.33e-50 170
Msa0173660 AT5G62320.1 56.250 144 56 1 2 138 3 146 1.46e-50 170
Msa0173660 AT3G48920.1 67.568 111 36 0 9 119 15 125 1.48e-50 171
Msa0173660 AT1G18710.1 58.140 129 54 0 1 129 1 129 2.39e-50 170
Msa0173660 AT1G16490.1 48.925 186 75 2 2 179 4 177 2.43e-50 171
Msa0173660 AT1G56160.1 65.217 115 40 0 2 116 4 118 1.84e-49 169
Msa0173660 AT5G23000.1 62.393 117 43 1 1 116 1 117 4.07e-47 164
Msa0173660 AT4G25560.1 68.519 108 34 0 8 115 6 113 6.19e-47 162
Msa0173660 AT5G49330.1 42.241 232 98 4 1 226 1 202 1.06e-46 163
Msa0173660 AT5G57620.1 60.000 125 47 2 1 122 1 125 1.42e-46 162
Msa0173660 AT5G52260.1 71.028 107 31 0 9 115 9 115 3.98e-46 159
Msa0173660 AT2G47460.1 56.818 132 57 0 1 132 1 132 5.02e-46 162
Msa0173660 AT3G62610.1 62.069 116 44 0 1 116 1 116 5.39e-46 161
Msa0173660 AT3G49690.1 60.833 120 46 1 1 119 1 120 8.20e-46 160
Msa0173660 AT3G12820.1 61.538 117 45 0 3 119 5 121 9.59e-46 157
Msa0173660 AT1G79180.2 52.667 150 38 1 2 118 4 153 1.13e-45 160
Msa0173660 AT5G65790.1 60.000 120 47 1 1 119 1 120 2.72e-45 160
Msa0173660 AT3G47600.1 57.627 118 50 0 1 118 1 118 1.26e-44 157
Msa0173660 AT1G74650.1 59.483 116 47 0 1 116 1 116 1.61e-44 157
Msa0173660 AT5G62470.2 58.475 118 49 0 1 118 1 118 2.73e-44 157
Msa0173660 AT4G37780.1 44.974 189 90 5 1 188 1 176 4.73e-44 155
Msa0173660 AT2G36890.1 55.906 127 55 1 1 126 1 127 1.21e-43 154
Msa0173660 AT2G36890.2 55.906 127 55 1 1 126 42 168 2.05e-43 154
Msa0173660 AT1G08810.1 55.738 122 54 0 1 122 1 122 2.88e-43 152
Msa0173660 AT5G35550.1 62.963 108 40 0 9 116 11 118 7.99e-43 150
Msa0173660 AT5G62470.1 58.475 118 48 1 1 118 1 117 1.77e-42 152
Msa0173660 AT5G06100.1 62.037 108 41 0 10 117 30 137 5.45e-42 153
Msa0173660 AT5G14750.1 56.731 104 45 0 13 116 17 120 8.33e-42 146
Msa0173660 AT3G28910.1 57.759 116 49 0 1 116 1 116 1.14e-41 149
Msa0173660 AT3G27810.1 55.856 111 49 0 11 121 19 129 2.04e-41 145
Msa0173660 AT5G06100.5 62.037 108 41 0 10 117 30 137 2.16e-41 152
Msa0173660 AT5G06100.2 62.037 108 41 0 10 117 30 137 2.16e-41 152
Msa0173660 AT5G06100.3 62.037 108 41 0 10 117 30 137 2.16e-41 152
Msa0173660 AT5G06100.4 62.037 108 41 0 10 117 30 137 2.16e-41 152
Msa0173660 AT3G01530.1 57.547 106 45 0 12 117 25 130 4.12e-41 144
Msa0173660 AT5G55020.1 60.748 107 42 0 12 118 26 132 8.56e-41 151
Msa0173660 AT5G40330.1 53.704 108 50 0 9 116 9 116 1.77e-40 143
Msa0173660 AT4G26930.1 59.813 107 43 0 12 118 19 125 1.79e-40 147
Msa0173660 AT3G11440.2 60.377 106 42 0 12 117 41 146 2.00e-40 149
Msa0173660 AT5G40350.1 56.364 110 48 0 11 120 16 125 2.47e-40 142
Msa0173660 AT5G52600.1 44.805 154 70 2 9 147 9 162 5.99e-40 141
Msa0173660 AT3G27920.1 53.271 107 50 0 10 116 12 118 6.64e-40 142
Msa0173660 AT3G11440.3 58.716 109 45 0 9 117 38 146 8.04e-40 149
Msa0173660 AT3G11440.4 58.716 109 45 0 9 117 38 146 8.04e-40 149
Msa0173660 AT3G11440.1 58.716 109 45 0 9 117 38 146 8.04e-40 149
Msa0173660 AT2G26960.1 35.745 235 124 4 9 222 17 245 1.04e-39 146
Msa0173660 AT2G32460.1 56.481 108 47 0 10 117 16 123 2.49e-39 146
Msa0173660 AT2G32460.2 57.547 106 45 0 12 117 6 111 2.80e-39 146
Msa0173660 AT4G13480.1 60.952 105 41 0 13 117 7 111 9.72e-39 139
Msa0173660 AT1G25340.1 46.358 151 67 2 13 151 19 167 4.27e-38 139
Msa0173660 AT3G24310.1 60.000 105 42 0 13 117 19 123 4.69e-38 138
Msa0173660 AT3G30210.1 60.784 102 40 0 13 114 28 129 1.14e-37 137
Msa0173660 AT1G48000.1 56.731 104 45 0 11 114 31 134 3.17e-37 135
Msa0173660 AT1G68320.1 51.220 123 60 0 10 132 17 139 5.44e-37 135
Msa0173660 AT3G53200.1 56.075 107 47 0 9 115 6 112 6.34e-36 131
Msa0173660 AT1G66370.1 56.731 104 45 0 12 115 8 111 1.02e-35 131
Msa0173660 AT2G26950.1 50.435 115 54 1 6 120 10 121 1.77e-35 134
Msa0173660 AT2G47190.1 49.550 111 56 0 12 122 20 130 7.69e-35 129
Msa0173660 AT5G59780.3 52.252 111 53 0 9 119 5 115 7.89e-35 129
Msa0173660 AT3G46130.1 53.271 107 50 0 13 119 10 116 3.81e-34 127
Msa0173660 AT1G56650.1 51.200 125 53 1 12 128 8 132 5.17e-34 127
Msa0173660 AT1G66380.1 59.615 104 42 0 12 115 8 111 1.13e-33 122
Msa0173660 AT3G60460.1 49.580 119 53 2 9 126 8 120 1.74e-33 127
Msa0173660 AT1G25340.2 44.371 151 65 3 13 151 19 162 2.86e-33 125
Msa0173660 AT3G06490.1 56.757 111 48 0 12 122 19 129 3.96e-33 126
Msa0173660 AT1G25340.3 44.371 151 65 3 13 151 19 162 6.47e-33 125
Msa0173660 AT1G66390.1 57.547 106 45 0 10 115 6 111 4.76e-32 121
Msa0173660 AT5G49620.1 54.054 111 51 0 12 122 26 136 4.11e-31 120
Msa0173660 AT5G35550.2 63.043 92 26 1 25 116 38 121 1.00e-30 118
Msa0173660 AT3G12820.2 69.444 72 22 0 48 119 2 73 1.57e-30 115
Msa0173660 AT3G27810.2 61.039 77 30 0 45 121 4 80 4.29e-30 114
Msa0173660 AT5G14750.3 65.217 69 24 0 48 116 18 86 7.39e-29 110
Msa0173660 AT5G40350.2 61.842 76 29 0 45 120 5 80 1.29e-28 110
Msa0173660 AT3G46130.3 61.842 76 29 0 44 119 9 84 5.28e-28 110
Msa0173660 AT3G47600.2 53.684 95 40 1 24 118 22 112 9.11e-28 112
Msa0173660 AT5G59780.2 61.039 77 30 0 43 119 18 94 1.14e-27 108
Msa0173660 AT3G46130.4 61.039 77 30 0 43 119 18 94 1.16e-27 109
Msa0173660 AT5G49620.2 48.000 125 51 1 12 122 26 150 1.32e-27 111
Msa0173660 AT3G53200.2 63.158 76 28 0 40 115 4 79 1.68e-27 108
Msa0173660 AT1G18960.1 42.636 129 66 4 5 132 4 125 2.09e-27 110
Msa0173660 AT4G18770.1 45.045 111 60 1 9 119 212 321 2.33e-27 112
Msa0173660 AT1G22640.3 60.811 74 29 0 58 131 1 74 2.81e-27 107
Msa0173660 AT5G67300.1 51.961 102 48 1 14 115 6 106 1.12e-26 108
Msa0173660 AT5G40360.1 44.444 108 58 2 9 116 153 258 1.99e-26 108
Msa0173660 AT3G27785.1 43.333 120 63 3 9 125 184 301 5.46e-26 108
Msa0173660 AT4G37260.1 44.361 133 66 2 14 146 13 137 6.35e-26 107
Msa0173660 AT5G58850.1 41.935 124 66 2 12 135 103 220 9.14e-26 108
Msa0173660 AT2G39880.1 54.369 103 44 2 14 115 50 150 1.35e-25 106
Msa0173660 AT3G50060.1 51.961 102 48 1 14 115 6 106 1.73e-25 105
Msa0173660 AT1G71030.2 55.844 77 34 0 51 127 5 81 4.02e-25 101
Msa0173660 AT1G71030.1 55.844 77 34 0 51 127 19 95 5.00e-25 101
Msa0173660 AT5G02320.1 47.170 106 55 1 11 116 124 228 5.05e-25 107
Msa0173660 AT5G02320.2 47.170 106 55 1 11 116 124 228 5.05e-25 107
Msa0173660 AT5G02320.3 47.170 106 55 1 11 116 64 168 5.15e-25 106
Msa0173660 AT5G11050.1 37.838 148 70 4 14 140 105 251 5.72e-25 105
Msa0173660 AT3G09370.1 49.038 104 52 1 12 115 128 230 6.28e-25 106
Msa0173660 AT3G09370.2 49.038 104 52 1 12 115 133 235 6.64e-25 106
Msa0173660 AT3G55730.1 52.427 103 46 2 14 115 56 156 1.09e-24 104
Msa0173660 AT3G09370.3 49.038 104 52 1 12 115 141 243 1.09e-24 105
Msa0173660 AT3G09230.1 48.544 103 52 1 14 116 55 156 1.50e-24 104
Msa0173660 AT1G17950.1 43.396 106 59 1 14 119 5 109 2.38e-24 100
Msa0173660 AT3G23250.2 69.492 59 18 0 58 116 1 59 3.26e-24 100
Msa0173660 AT5G11510.3 45.283 106 57 1 11 116 78 182 7.89e-24 104
Msa0173660 AT5G11510.1 45.283 106 57 1 11 116 78 182 7.89e-24 104
Msa0173660 AT5G11510.4 45.283 106 57 1 11 116 78 182 7.89e-24 104
Msa0173660 AT2G23290.1 43.609 133 73 2 14 146 13 143 8.84e-24 100
Msa0173660 AT5G11510.2 45.283 106 57 1 11 116 78 182 1.05e-23 103
Msa0173660 AT1G69560.1 41.071 112 63 2 9 119 102 211 1.06e-23 100
Msa0173660 AT5G11510.5 45.283 106 57 1 11 116 78 182 1.06e-23 103
Msa0173660 AT1G69560.2 40.708 113 64 2 9 120 118 228 1.30e-23 100
Msa0173660 AT1G73410.1 47.170 106 53 2 14 118 6 109 5.62e-23 97.1
Msa0173660 AT1G26780.1 42.593 108 59 2 12 118 96 201 8.12e-23 97.4
Msa0173660 AT1G26780.2 42.593 108 59 2 12 118 96 201 9.35e-23 98.6
Msa0173660 AT4G32730.5 44.340 106 58 1 11 116 84 188 1.09e-22 100
Msa0173660 AT4G32730.4 44.340 106 58 1 11 116 84 188 1.09e-22 100
Msa0173660 AT4G32730.3 44.340 106 58 1 11 116 84 188 1.09e-22 100
Msa0173660 AT4G32730.2 44.340 106 58 1 11 116 84 188 1.09e-22 100
Msa0173660 AT4G32730.1 44.340 106 58 1 11 116 84 188 1.25e-22 100
Msa0173660 AT1G73410.2 47.170 106 53 2 14 118 6 109 1.91e-22 94.4
Msa0173660 AT4G33450.1 40.000 110 65 1 9 118 14 122 4.19e-22 94.7
Msa0173660 AT2G25230.1 39.831 118 68 2 9 124 21 137 4.58e-22 94.4
Msa0173660 AT1G66380.3 61.111 72 28 0 44 115 7 78 6.58e-22 90.1
Msa0173660 AT1G66380.2 57.500 80 34 0 10 89 6 85 7.36e-22 90.1
Msa0173660 AT5G17800.1 40.000 105 62 1 14 118 93 196 3.99e-21 93.6
Msa0173660 AT3G29020.1 37.838 111 68 1 14 124 65 174 1.30e-20 90.1
Msa0173660 AT3G29020.2 38.679 106 64 1 14 119 67 171 1.38e-20 91.7
Msa0173660 AT5G14750.4 58.065 62 26 0 58 119 1 62 2.92e-20 86.7
Msa0173660 AT5G14750.2 58.065 62 26 0 58 119 1 62 2.92e-20 86.7
Msa0173660 AT2G02820.3 38.655 119 71 2 4 121 19 136 8.14e-20 89.7
Msa0173660 AT2G02820.1 38.655 119 71 2 4 121 19 136 1.10e-19 90.9
Msa0173660 AT2G02820.2 38.655 119 71 2 4 121 19 136 1.60e-19 90.5
Msa0173660 AT4G00540.2 43.636 110 58 2 12 118 101 209 2.75e-19 89.4
Msa0173660 AT5G40430.1 39.286 112 65 3 9 120 49 157 4.04e-19 86.7
Msa0173660 AT4G00540.1 43.636 110 58 2 12 118 99 207 4.89e-19 88.6
Msa0173660 AT1G14350.2 40.000 105 62 1 17 121 28 131 3.83e-18 85.9
Msa0173660 AT1G14350.1 40.000 105 62 1 17 121 28 131 3.83e-18 85.9
Msa0173660 AT5G61420.1 68.519 54 17 0 81 134 2 55 7.73e-18 83.6
Msa0173660 AT2G37630.1 35.652 115 67 2 17 124 7 121 1.09e-16 81.3
Msa0173660 AT5G39700.1 33.621 116 76 1 9 124 51 165 4.37e-16 76.3
Msa0173660 AT1G74430.2 61.538 52 20 0 77 128 8 59 3.43e-15 74.3
Msa0173660 AT4G28110.2 73.171 41 11 0 88 128 4 44 1.34e-14 72.4
Msa0173660 AT5G15310.3 72.727 44 12 0 88 131 9 52 4.99e-14 71.6
Msa0173660 AT5G14340.2 40.964 83 46 1 88 170 10 89 5.25e-14 70.5
Msa0173660 AT5G59780.1 59.574 47 19 0 73 119 4 50 3.38e-13 67.8
Msa0173660 AT3G46130.2 59.574 47 19 0 73 119 4 50 4.15e-13 67.8
Msa0173660 AT1G14350.3 45.455 66 36 0 56 121 23 88 1.78e-12 68.6
Msa0173660 AT1G14350.4 45.455 66 36 0 56 121 23 88 1.78e-12 68.6
Msa0173660 AT4G25560.2 65.217 46 16 0 70 115 2 47 2.69e-12 66.2
Msa0173660 AT3G18100.1 37.500 96 59 1 13 108 545 639 1.01e-11 67.0
Msa0173660 AT3G18100.4 37.500 96 59 1 13 108 384 478 1.35e-11 66.6
Msa0173660 AT3G18100.3 37.500 96 59 1 13 108 497 591 1.45e-11 66.6
Msa0173660 AT3G18100.2 37.500 96 59 1 13 108 332 426 1.74e-11 66.2
Msa0173660 AT1G22640.2 59.091 44 18 0 88 131 16 59 2.23e-11 62.8

Find 77 sgRNAs with CRISPR-Local

Find 224 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
ACAATGAAATAAAGAATTTA+TGG 0.200655 1_4:-58990869 Msa0173660:CDS
TTCTTCTTGGGGAGGATTAA+TGG 0.211991 1_4:-58990268 Msa0173660:CDS
ATTGTTGTTATGTAAGTTTA+AGG 0.238149 1_4:+58990293 None:intergenic
ATTTCCATTGCATATGCTTT+TGG 0.239502 1_4:+58990627 None:intergenic
CAAATATCAACAAAGCAAAA+AGG 0.282988 1_4:+58989861 None:intergenic
TTTCAAAAGGTTCAATTCAT+TGG 0.290203 1_4:+58990713 None:intergenic
CAGAAACTCAGAGAAGCTTT+TGG 0.294526 1_4:-58990045 Msa0173660:CDS
GAGAATAATGGAGAGGAAAA+TGG 0.306414 1_4:-58990774 Msa0173660:CDS
CATTCAACCCTCAGATTTGA+TGG 0.319312 1_4:-58990565 Msa0173660:CDS
AACTTTGTACCAGATAGTTT+TGG 0.328603 1_4:-58990141 Msa0173660:CDS
CTACTAGTGTTTGAATCATT+TGG 0.336320 1_4:+58990492 None:intergenic
TCAGAAGCAAGCATTAAGAT+AGG 0.337065 1_4:+58990198 None:intergenic
TCAAATTGCGGCGCAATTGC+CGG 0.343894 1_4:-58990901 Msa0173660:CDS
TGGGGTAGAATTGGTGAATA+AGG 0.350617 1_4:-58989806 Msa0173660:three_prime_UTR
GTTGAACTTCATGCAGTACT+AGG 0.358540 1_4:-58991093 Msa0173660:CDS
AAGAAGAGACTGAGACAAAA+AGG 0.366324 1_4:-58990834 Msa0173660:CDS
AAAATAGCTCCAAAACTATC+TGG 0.372468 1_4:+58990132 None:intergenic
AACCATTGGTTCAACCAAAC+TGG 0.373334 1_4:-58990468 Msa0173660:CDS
CAAATTGCGGCGCAATTGCC+GGG 0.376424 1_4:-58990900 Msa0173660:CDS
AAAAGGAGTTGAGTTAATAT+AGG 0.380687 1_4:+58991544 None:intergenic
CTCATAGGAAAATTCACAAA+TGG 0.392453 1_4:-58991454 Msa0173660:exon
AAAAGCATATGCAATGGAAA+TGG 0.406668 1_4:-58990625 Msa0173660:CDS
TCTGAGTTTCTGAATGTCCT+TGG 0.406727 1_4:+58990056 None:intergenic
TTGTCTGAGATTGAGAATAA+TGG 0.407472 1_4:-58990786 Msa0173660:CDS
TCTTGTTCTTGCTTTGTATG+AGG 0.413126 1_4:+58990108 None:intergenic
CTGAGGCATATAACAAAGTA+TGG 0.421343 1_4:-58991360 Msa0173660:CDS
TTGAACTCTCTGATTTCAAA+AGG 0.423755 1_4:+58990700 None:intergenic
GTGGTAAGAGCTGCAGGCTT+AGG 0.429634 1_4:-58991182 Msa0173660:CDS
GATAATTTACCTGCTTGCTT+AGG 0.447899 1_4:+58991315 None:intergenic
CTATGAGTGTGGGGTAGAAT+TGG 0.448665 1_4:-58989815 Msa0173660:three_prime_UTR
GTTGTTACAAGCAGAAGCTT+AGG 0.455012 1_4:-58991419 Msa0173660:CDS
TTAGTGATAGAGAGAATTGA+AGG 0.455261 1_4:+58991497 None:intergenic
TTCCAGTTTGGTTGAACCAA+TGG 0.463181 1_4:+58990466 None:intergenic
CATGGTTGTTGATGTTGTTG+TGG 0.467386 1_4:+58990404 None:intergenic
TCATTGGATAATAATATCTC+TGG 0.476615 1_4:+58990729 None:intergenic
ATGGTTGTTGATGTTGTTGT+GGG 0.482724 1_4:+58990405 None:intergenic
TTTGTATAACTCATTTGAAG+TGG 0.483418 1_4:+58990534 None:intergenic
TCATAGGAAAATTCACAAAT+GGG 0.491057 1_4:-58991453 Msa0173660:exon
CAAAGTATGGTCATGGATGT+TGG 0.495747 1_4:-58991347 Msa0173660:CDS
TTATTCTCAATCTCAGACAA+TGG 0.501529 1_4:+58990789 None:intergenic
TTCATGCAGTACTAGGGAAT+AGG 0.501696 1_4:-58991086 Msa0173660:intron
CAGAAGCAAGCATTAAGATA+GGG 0.504178 1_4:+58990199 None:intergenic
TCTGGTACAAAGTTCATCAA+TGG 0.513100 1_4:+58990150 None:intergenic
ATTTCATTGTCTGTCCTCCC+CGG 0.513376 1_4:+58990882 None:intergenic
GACAATGGTTTATGAGTCAC+AGG 0.514909 1_4:+58990804 None:intergenic
CTTCTCTCTCATGAGACATA+AGG 0.514936 1_4:-58991576 Msa0173660:five_prime_UTR
AAAGATGTGGTAAGAGCTGC+AGG 0.517924 1_4:-58991188 Msa0173660:CDS
GTGAAGTGGCAGCTAAGAAA+AGG 0.519650 1_4:+58991527 None:intergenic
AGAAGCTTAGGAAAGGTCTA+TGG 0.519654 1_4:-58991407 Msa0173660:CDS
GTAAGAGCTGCAGGCTTAGG+TGG 0.521603 1_4:-58991179 Msa0173660:CDS
GAGATATGTGAACATGATTG+TGG 0.523895 1_4:-58990023 Msa0173660:exon
TGATAGAGAGAATTGAAGGA+AGG 0.525000 1_4:+58991501 None:intergenic
CATATAACAAAGTATGGTCA+TGG 0.533584 1_4:-58991354 Msa0173660:CDS
AAAATTTCCCATCAAATCTG+AGG 0.537811 1_4:+58990557 None:intergenic
ATTCAACCCTCAGATTTGAT+GGG 0.538604 1_4:-58990564 Msa0173660:CDS
TTGAACTTCATGCAGTACTA+GGG 0.545997 1_4:-58991092 Msa0173660:CDS
TCATACAGAAGAAGCTAAGT+GGG 0.564291 1_4:-58990241 Msa0173660:CDS
TTATCAGGTTTGCAAAGATG+TGG 0.565876 1_4:-58991201 Msa0173660:intron
TTCACCAAAAGCATATGCAA+TGG 0.574736 1_4:-58990631 Msa0173660:CDS
ATCATACAGAAGAAGCTAAG+TGG 0.575317 1_4:-58990242 Msa0173660:CDS
TATCAGATGGTCTCAAATTG+CGG 0.579070 1_4:-58990913 Msa0173660:intron
AGGAAAATTCACAAATGGGA+AGG 0.581895 1_4:-58991449 Msa0173660:exon
TTGCGGCGCAATTGCCGGGG+AGG 0.583739 1_4:-58990896 Msa0173660:CDS
TTGAAGGAAGGAAAGTGAAG+TGG 0.584361 1_4:+58991513 None:intergenic
CTCTGTGGAAACATTGTCAG+AGG 0.587422 1_4:+58990338 None:intergenic
AAATTTCCCATCAAATCTGA+GGG 0.588053 1_4:+58990558 None:intergenic
CAAACACTAGTAGTAACCAT+TGG 0.594685 1_4:-58990482 Msa0173660:CDS
GCATATGCAATGGAAATGGA+AGG 0.607612 1_4:-58990621 Msa0173660:CDS
AAGAGGAACATTCTCACAAG+AGG 0.608650 1_4:-58991130 Msa0173660:CDS
TACAAGCAGAAGCTTAGGAA+AGG 0.614815 1_4:-58991414 Msa0173660:CDS
AGTTCAGTACCTAAGCAAGC+AGG 0.631698 1_4:-58991324 Msa0173660:intron
GGTACAAAGTTCATCAATGG+AGG 0.632864 1_4:+58990153 None:intergenic
GCTGCTAGTTCTCATCTCTG+TGG 0.644097 1_4:+58990323 None:intergenic
AAATTGCGGCGCAATTGCCG+GGG 0.649843 1_4:-58990899 Msa0173660:CDS
TGAGATTGAGAATAATGGAG+AGG 0.653412 1_4:-58990781 Msa0173660:CDS
TCTGTGGAAACATTGTCAGA+GGG 0.661164 1_4:+58990339 None:intergenic
AAAAGAATTAGGAAGAAACA+TGG 0.684494 1_4:+58990386 None:intergenic

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! TTATTATTATTATATGCTAA+TGG + chr1_4:58990135-58990154 None:intergenic 10.0%
!!! AATTTTTGTTTATTATTATC+AGG - chr1_4:58990197-58990216 Msa0173660:CDS 10.0%
!! TTATTATTATTATATGCTAA+TGG + chr1_4:58990135-58990154 None:intergenic 10.0%
!!! AATTTTTGTTTATTATTATC+AGG - chr1_4:58990197-58990216 Msa0173660:CDS 10.0%
!! ACAATGAAATAAAGAATTTA+TGG - chr1_4:58990544-58990563 Msa0173660:CDS 15.0%
!!! AACAAATTGCTTTTTTTTTT+TGG + chr1_4:58991521-58991540 None:intergenic 15.0%
!! ACAATGAAATAAAGAATTTA+TGG - chr1_4:58990544-58990563 Msa0173660:CDS 15.0%
!!! AACAAATTGCTTTTTTTTTT+TGG + chr1_4:58991521-58991540 None:intergenic 15.0%
!! CATAGGAGAAAATAAAAAAA+AGG + chr1_4:58990376-58990395 None:intergenic 20.0%
!!! CTTTTTTTTATTTTCTCCTA+TGG - chr1_4:58990374-58990393 Msa0173660:CDS 20.0%
!!! ATTGTTGTTATGTAAGTTTA+AGG + chr1_4:58991123-58991142 None:intergenic 20.0%
!!! ATAACAACAATTTTTCTTCT+TGG - chr1_4:58991132-58991151 Msa0173660:CDS 20.0%
!!! TAACAACAATTTTTCTTCTT+GGG - chr1_4:58991133-58991152 Msa0173660:CDS 20.0%
!!! AACTTCTAATATATTTTCCA+AGG - chr1_4:58991340-58991359 Msa0173660:CDS 20.0%
!! AAATATCAACAAAGCAAAAA+GGG + chr1_4:58991554-58991573 None:intergenic 20.0%
!! ATAGAAGAAAAAAATGTAGT+TGG + chr1_4:58991582-58991601 None:intergenic 20.0%
!! CATAGGAGAAAATAAAAAAA+AGG + chr1_4:58990376-58990395 None:intergenic 20.0%
!!! CTTTTTTTTATTTTCTCCTA+TGG - chr1_4:58990374-58990393 Msa0173660:CDS 20.0%
!!! ATTGTTGTTATGTAAGTTTA+AGG + chr1_4:58991123-58991142 None:intergenic 20.0%
!!! ATAACAACAATTTTTCTTCT+TGG - chr1_4:58991132-58991151 Msa0173660:CDS 20.0%
!!! TAACAACAATTTTTCTTCTT+GGG - chr1_4:58991133-58991152 Msa0173660:CDS 20.0%
!!! AACTTCTAATATATTTTCCA+AGG - chr1_4:58991340-58991359 Msa0173660:CDS 20.0%
!! AAATATCAACAAAGCAAAAA+GGG + chr1_4:58991554-58991573 None:intergenic 20.0%
!! ATAGAAGAAAAAAATGTAGT+TGG + chr1_4:58991582-58991601 None:intergenic 20.0%
! AAAAGGAGTTGAGTTAATAT+AGG + chr1_4:58989872-58989891 None:intergenic 25.0%
! TCATAGGAAAATTCACAAAT+GGG - chr1_4:58989960-58989979 Msa0173660:three_prime_UTR 25.0%
! TTAAGACCTGATTTAAAAAG+AGG - chr1_4:58990266-58990285 Msa0173660:CDS 25.0%
!! AATGTTCCTCTTTTTAAATC+AGG + chr1_4:58990275-58990294 None:intergenic 25.0%
!! TTCATTTTCTTCTTATCAGA+TGG - chr1_4:58990487-58990506 Msa0173660:CDS 25.0%
! TCATTGGATAATAATATCTC+TGG + chr1_4:58990687-58990706 None:intergenic 25.0%
! TTTCAAAAGGTTCAATTCAT+TGG + chr1_4:58990703-58990722 None:intergenic 25.0%
!! ACAAAGAGTTTTTCATAGAT+AGG - chr1_4:58990823-58990842 Msa0173660:CDS 25.0%
! TTTGTATAACTCATTTGAAG+TGG + chr1_4:58990882-58990901 None:intergenic 25.0%
!! TATCAAAAGATTTTCCAGTT+TGG + chr1_4:58990962-58990981 None:intergenic 25.0%
! AAAAGAATTAGGAAGAAACA+TGG + chr1_4:58991030-58991049 None:intergenic 25.0%
!! AACAACAATTTTTCTTCTTG+GGG - chr1_4:58991134-58991153 Msa0173660:CDS 25.0%
!!! TGTTGTTTTTTCTTTAGTAC+AGG - chr1_4:58991445-58991464 Msa0173660:exon 25.0%
! ATATACAAGAGAAAAATCAG+TGG + chr1_4:58991480-58991499 None:intergenic 25.0%
!! CTGATTTTTCTCTTGTATAT+AGG - chr1_4:58991480-58991499 Msa0173660:five_prime_UTR 25.0%
! CAAATATCAACAAAGCAAAA+AGG + chr1_4:58991555-58991574 None:intergenic 25.0%
!!! ATTTTTTTCTTCTATGAGTG+TGG - chr1_4:58991587-58991606 Msa0173660:five_prime_UTR 25.0%
!!! TTTTTTTCTTCTATGAGTGT+GGG - chr1_4:58991588-58991607 Msa0173660:five_prime_UTR 25.0%
! AAAAGGAGTTGAGTTAATAT+AGG + chr1_4:58989872-58989891 None:intergenic 25.0%
! TCATAGGAAAATTCACAAAT+GGG - chr1_4:58989960-58989979 Msa0173660:three_prime_UTR 25.0%
! TTAAGACCTGATTTAAAAAG+AGG - chr1_4:58990266-58990285 Msa0173660:CDS 25.0%
!! AATGTTCCTCTTTTTAAATC+AGG + chr1_4:58990275-58990294 None:intergenic 25.0%
!! TTCATTTTCTTCTTATCAGA+TGG - chr1_4:58990487-58990506 Msa0173660:CDS 25.0%
! TCATTGGATAATAATATCTC+TGG + chr1_4:58990687-58990706 None:intergenic 25.0%
! TTTCAAAAGGTTCAATTCAT+TGG + chr1_4:58990703-58990722 None:intergenic 25.0%
!! ACAAAGAGTTTTTCATAGAT+AGG - chr1_4:58990823-58990842 Msa0173660:CDS 25.0%
! TTTGTATAACTCATTTGAAG+TGG + chr1_4:58990882-58990901 None:intergenic 25.0%
!! TATCAAAAGATTTTCCAGTT+TGG + chr1_4:58990962-58990981 None:intergenic 25.0%
! AAAAGAATTAGGAAGAAACA+TGG + chr1_4:58991030-58991049 None:intergenic 25.0%
!! AACAACAATTTTTCTTCTTG+GGG - chr1_4:58991134-58991153 Msa0173660:CDS 25.0%
!!! TGTTGTTTTTTCTTTAGTAC+AGG - chr1_4:58991445-58991464 Msa0173660:exon 25.0%
! ATATACAAGAGAAAAATCAG+TGG + chr1_4:58991480-58991499 None:intergenic 25.0%
!! CTGATTTTTCTCTTGTATAT+AGG - chr1_4:58991480-58991499 Msa0173660:five_prime_UTR 25.0%
! CAAATATCAACAAAGCAAAA+AGG + chr1_4:58991555-58991574 None:intergenic 25.0%
!!! ATTTTTTTCTTCTATGAGTG+TGG - chr1_4:58991587-58991606 Msa0173660:five_prime_UTR 25.0%
!!! TTTTTTTCTTCTATGAGTGT+GGG - chr1_4:58991588-58991607 Msa0173660:five_prime_UTR 25.0%
TTAGTGATAGAGAGAATTGA+AGG + chr1_4:58989919-58989938 None:intergenic 30.0%
TGAGAAGAAAAATGAAGCAA+TGG + chr1_4:58989943-58989962 None:intergenic 30.0%
!! TGCTTCATTTTTCTTCTCAT+AGG - chr1_4:58989944-58989963 Msa0173660:three_prime_UTR 30.0%
CTCATAGGAAAATTCACAAA+TGG - chr1_4:58989959-58989978 Msa0173660:three_prime_UTR 30.0%
! AGTAGTTTTTCATCTTCTTC+TGG + chr1_4:58990035-58990054 None:intergenic 30.0%
AAGAAGATGAAAAACTACTG+AGG - chr1_4:58990036-58990055 Msa0173660:CDS 30.0%
CATATAACAAAGTATGGTCA+TGG - chr1_4:58990059-58990078 Msa0173660:CDS 30.0%
TTATTCTCAATCTCAGACAA+TGG + chr1_4:58990627-58990646 None:intergenic 30.0%
! TTGTCTGAGATTGAGAATAA+TGG - chr1_4:58990627-58990646 Msa0173660:CDS 30.0%
TTGAACTCTCTGATTTCAAA+AGG + chr1_4:58990716-58990735 None:intergenic 30.0%
! ATTTCCATTGCATATGCTTT+TGG + chr1_4:58990789-58990808 None:intergenic 30.0%
! AAAAGCATATGCAATGGAAA+TGG - chr1_4:58990788-58990807 Msa0173660:CDS 30.0%
AAATTTCCCATCAAATCTGA+GGG + chr1_4:58990858-58990877 None:intergenic 30.0%
AAAATTTCCCATCAAATCTG+AGG + chr1_4:58990859-58990878 None:intergenic 30.0%
CTACTAGTGTTTGAATCATT+TGG + chr1_4:58990924-58990943 None:intergenic 30.0%
TTGTTGCAGCAAAAAGAATT+AGG + chr1_4:58991041-58991060 None:intergenic 30.0%
! AACTTTGTACCAGATAGTTT+TGG - chr1_4:58991272-58991291 Msa0173660:intron 30.0%
AAAATAGCTCCAAAACTATC+TGG + chr1_4:58991284-58991303 None:intergenic 30.0%
!! AACAGTGTGAAGATTTTTAG+AGG - chr1_4:58991422-58991441 Msa0173660:CDS 30.0%
!!! TTTTTTCTTCTATGAGTGTG+GGG - chr1_4:58991589-58991608 Msa0173660:five_prime_UTR 30.0%
TTAGTGATAGAGAGAATTGA+AGG + chr1_4:58989919-58989938 None:intergenic 30.0%
TGAGAAGAAAAATGAAGCAA+TGG + chr1_4:58989943-58989962 None:intergenic 30.0%
!! TGCTTCATTTTTCTTCTCAT+AGG - chr1_4:58989944-58989963 Msa0173660:three_prime_UTR 30.0%
CTCATAGGAAAATTCACAAA+TGG - chr1_4:58989959-58989978 Msa0173660:three_prime_UTR 30.0%
! AGTAGTTTTTCATCTTCTTC+TGG + chr1_4:58990035-58990054 None:intergenic 30.0%
AAGAAGATGAAAAACTACTG+AGG - chr1_4:58990036-58990055 Msa0173660:CDS 30.0%
CATATAACAAAGTATGGTCA+TGG - chr1_4:58990059-58990078 Msa0173660:CDS 30.0%
TTATTCTCAATCTCAGACAA+TGG + chr1_4:58990627-58990646 None:intergenic 30.0%
! TTGTCTGAGATTGAGAATAA+TGG - chr1_4:58990627-58990646 Msa0173660:CDS 30.0%
TTGAACTCTCTGATTTCAAA+AGG + chr1_4:58990716-58990735 None:intergenic 30.0%
! ATTTCCATTGCATATGCTTT+TGG + chr1_4:58990789-58990808 None:intergenic 30.0%
! AAAAGCATATGCAATGGAAA+TGG - chr1_4:58990788-58990807 Msa0173660:CDS 30.0%
AAATTTCCCATCAAATCTGA+GGG + chr1_4:58990858-58990877 None:intergenic 30.0%
AAAATTTCCCATCAAATCTG+AGG + chr1_4:58990859-58990878 None:intergenic 30.0%
CTACTAGTGTTTGAATCATT+TGG + chr1_4:58990924-58990943 None:intergenic 30.0%
TTGTTGCAGCAAAAAGAATT+AGG + chr1_4:58991041-58991060 None:intergenic 30.0%
! AACTTTGTACCAGATAGTTT+TGG - chr1_4:58991272-58991291 Msa0173660:intron 30.0%
AAAATAGCTCCAAAACTATC+TGG + chr1_4:58991284-58991303 None:intergenic 30.0%
!! AACAGTGTGAAGATTTTTAG+AGG - chr1_4:58991422-58991441 Msa0173660:CDS 30.0%
!!! TTTTTTCTTCTATGAGTGTG+GGG - chr1_4:58991589-58991608 Msa0173660:five_prime_UTR 30.0%
TGATAGAGAGAATTGAAGGA+AGG + chr1_4:58989915-58989934 None:intergenic 35.0%
AGGAAAATTCACAAATGGGA+AGG - chr1_4:58989964-58989983 Msa0173660:three_prime_UTR 35.0%
CTGAGGCATATAACAAAGTA+TGG - chr1_4:58990053-58990072 Msa0173660:CDS 35.0%
GATAATTTACCTGCTTGCTT+AGG + chr1_4:58990101-58990120 None:intergenic 35.0%
TTATCAGGTTTGCAAAGATG+TGG - chr1_4:58990212-58990231 Msa0173660:CDS 35.0%
TTGAACTTCATGCAGTACTA+GGG - chr1_4:58990321-58990340 Msa0173660:CDS 35.0%
TATCACTCTTGCTTAACCAT+AGG + chr1_4:58990393-58990412 None:intergenic 35.0%
ATGGTTAAGCAAGAGTGATA+AGG - chr1_4:58990393-58990412 Msa0173660:CDS 35.0%
TATCAGATGGTCTCAAATTG+CGG - chr1_4:58990500-58990519 Msa0173660:CDS 35.0%
AAGAAGAGACTGAGACAAAA+AGG - chr1_4:58990579-58990598 Msa0173660:CDS 35.0%
! TGAGATTGAGAATAATGGAG+AGG - chr1_4:58990632-58990651 Msa0173660:CDS 35.0%
! GAGAATAATGGAGAGGAAAA+TGG - chr1_4:58990639-58990658 Msa0173660:CDS 35.0%
! TTCACCAAAAGCATATGCAA+TGG - chr1_4:58990782-58990801 Msa0173660:CDS 35.0%
ATTCAACCCTCAGATTTGAT+GGG - chr1_4:58990849-58990868 Msa0173660:CDS 35.0%
CAAACACTAGTAGTAACCAT+TGG - chr1_4:58990931-58990950 Msa0173660:intron 35.0%
ATGGTTGTTGATGTTGTTGT+GGG + chr1_4:58991011-58991030 None:intergenic 35.0%
! AACAATTTTTCTTCTTGGGG+AGG - chr1_4:58991137-58991156 Msa0173660:CDS 35.0%
ATCATACAGAAGAAGCTAAG+TGG - chr1_4:58991171-58991190 Msa0173660:CDS 35.0%
TCATACAGAAGAAGCTAAGT+GGG - chr1_4:58991172-58991191 Msa0173660:CDS 35.0%
CAGAAGCAAGCATTAAGATA+GGG + chr1_4:58991217-58991236 None:intergenic 35.0%
TCAGAAGCAAGCATTAAGAT+AGG + chr1_4:58991218-58991237 None:intergenic 35.0%
TCTGGTACAAAGTTCATCAA+TGG + chr1_4:58991266-58991285 None:intergenic 35.0%
TCTTGTTCTTGCTTTGTATG+AGG + chr1_4:58991308-58991327 None:intergenic 35.0%
GAGATATGTGAACATGATTG+TGG - chr1_4:58991390-58991409 Msa0173660:CDS 35.0%
TGATAGAGAGAATTGAAGGA+AGG + chr1_4:58989915-58989934 None:intergenic 35.0%
AGGAAAATTCACAAATGGGA+AGG - chr1_4:58989964-58989983 Msa0173660:three_prime_UTR 35.0%
CTGAGGCATATAACAAAGTA+TGG - chr1_4:58990053-58990072 Msa0173660:CDS 35.0%
GATAATTTACCTGCTTGCTT+AGG + chr1_4:58990101-58990120 None:intergenic 35.0%
TTATCAGGTTTGCAAAGATG+TGG - chr1_4:58990212-58990231 Msa0173660:CDS 35.0%
TTGAACTTCATGCAGTACTA+GGG - chr1_4:58990321-58990340 Msa0173660:CDS 35.0%
TATCACTCTTGCTTAACCAT+AGG + chr1_4:58990393-58990412 None:intergenic 35.0%
ATGGTTAAGCAAGAGTGATA+AGG - chr1_4:58990393-58990412 Msa0173660:CDS 35.0%
TATCAGATGGTCTCAAATTG+CGG - chr1_4:58990500-58990519 Msa0173660:CDS 35.0%
AAGAAGAGACTGAGACAAAA+AGG - chr1_4:58990579-58990598 Msa0173660:CDS 35.0%
! TGAGATTGAGAATAATGGAG+AGG - chr1_4:58990632-58990651 Msa0173660:CDS 35.0%
! GAGAATAATGGAGAGGAAAA+TGG - chr1_4:58990639-58990658 Msa0173660:CDS 35.0%
! TTCACCAAAAGCATATGCAA+TGG - chr1_4:58990782-58990801 Msa0173660:CDS 35.0%
ATTCAACCCTCAGATTTGAT+GGG - chr1_4:58990849-58990868 Msa0173660:CDS 35.0%
CAAACACTAGTAGTAACCAT+TGG - chr1_4:58990931-58990950 Msa0173660:intron 35.0%
ATGGTTGTTGATGTTGTTGT+GGG + chr1_4:58991011-58991030 None:intergenic 35.0%
! AACAATTTTTCTTCTTGGGG+AGG - chr1_4:58991137-58991156 Msa0173660:CDS 35.0%
ATCATACAGAAGAAGCTAAG+TGG - chr1_4:58991171-58991190 Msa0173660:CDS 35.0%
TCATACAGAAGAAGCTAAGT+GGG - chr1_4:58991172-58991191 Msa0173660:CDS 35.0%
CAGAAGCAAGCATTAAGATA+GGG + chr1_4:58991217-58991236 None:intergenic 35.0%
TCAGAAGCAAGCATTAAGAT+AGG + chr1_4:58991218-58991237 None:intergenic 35.0%
TCTGGTACAAAGTTCATCAA+TGG + chr1_4:58991266-58991285 None:intergenic 35.0%
TCTTGTTCTTGCTTTGTATG+AGG + chr1_4:58991308-58991327 None:intergenic 35.0%
GAGATATGTGAACATGATTG+TGG - chr1_4:58991390-58991409 Msa0173660:CDS 35.0%
CTTCTCTCTCATGAGACATA+AGG - chr1_4:58989837-58989856 Msa0173660:three_prime_UTR 40.0%
TTGAAGGAAGGAAAGTGAAG+TGG + chr1_4:58989903-58989922 None:intergenic 40.0%
GTTGTTACAAGCAGAAGCTT+AGG - chr1_4:58989994-58990013 Msa0173660:three_prime_UTR 40.0%
TACAAGCAGAAGCTTAGGAA+AGG - chr1_4:58989999-58990018 Msa0173660:three_prime_UTR 40.0%
AGAAGCTTAGGAAAGGTCTA+TGG - chr1_4:58990006-58990025 Msa0173660:three_prime_UTR 40.0%
CAAAGTATGGTCATGGATGT+TGG - chr1_4:58990066-58990085 Msa0173660:CDS 40.0%
AAGAGGAACATTCTCACAAG+AGG - chr1_4:58990283-58990302 Msa0173660:CDS 40.0%
GTTGAACTTCATGCAGTACT+AGG - chr1_4:58990320-58990339 Msa0173660:CDS 40.0%
TTCATGCAGTACTAGGGAAT+AGG - chr1_4:58990327-58990346 Msa0173660:CDS 40.0%
GTTAAGCAAGAGTGATAAGG+AGG - chr1_4:58990396-58990415 Msa0173660:CDS 40.0%
GACAATGGTTTATGAGTCAC+AGG + chr1_4:58990612-58990631 None:intergenic 40.0%
GCATATGCAATGGAAATGGA+AGG - chr1_4:58990792-58990811 Msa0173660:CDS 40.0%
CATTCAACCCTCAGATTTGA+TGG - chr1_4:58990848-58990867 Msa0173660:CDS 40.0%
!! AACCATTGGTTCAACCAAAC+TGG - chr1_4:58990945-58990964 Msa0173660:intron 40.0%
TTCCAGTTTGGTTGAACCAA+TGG + chr1_4:58990950-58990969 None:intergenic 40.0%
CATGGTTGTTGATGTTGTTG+TGG + chr1_4:58991012-58991031 None:intergenic 40.0%
TCTGTGGAAACATTGTCAGA+GGG + chr1_4:58991077-58991096 None:intergenic 40.0%
TTCTTCTTGGGGAGGATTAA+TGG - chr1_4:58991145-58991164 Msa0173660:CDS 40.0%
GGTACAAAGTTCATCAATGG+AGG + chr1_4:58991263-58991282 None:intergenic 40.0%
TCTGAGTTTCTGAATGTCCT+TGG + chr1_4:58991360-58991379 None:intergenic 40.0%
! CAGAAACTCAGAGAAGCTTT+TGG - chr1_4:58991368-58991387 Msa0173660:CDS 40.0%
TGGGGTAGAATTGGTGAATA+AGG - chr1_4:58991607-58991626 Msa0173660:five_prime_UTR 40.0%
CTTCTCTCTCATGAGACATA+AGG - chr1_4:58989837-58989856 Msa0173660:three_prime_UTR 40.0%
TTGAAGGAAGGAAAGTGAAG+TGG + chr1_4:58989903-58989922 None:intergenic 40.0%
GTTGTTACAAGCAGAAGCTT+AGG - chr1_4:58989994-58990013 Msa0173660:three_prime_UTR 40.0%
TACAAGCAGAAGCTTAGGAA+AGG - chr1_4:58989999-58990018 Msa0173660:three_prime_UTR 40.0%
AGAAGCTTAGGAAAGGTCTA+TGG - chr1_4:58990006-58990025 Msa0173660:three_prime_UTR 40.0%
CAAAGTATGGTCATGGATGT+TGG - chr1_4:58990066-58990085 Msa0173660:CDS 40.0%
AAGAGGAACATTCTCACAAG+AGG - chr1_4:58990283-58990302 Msa0173660:CDS 40.0%
GTTGAACTTCATGCAGTACT+AGG - chr1_4:58990320-58990339 Msa0173660:CDS 40.0%
TTCATGCAGTACTAGGGAAT+AGG - chr1_4:58990327-58990346 Msa0173660:CDS 40.0%
GTTAAGCAAGAGTGATAAGG+AGG - chr1_4:58990396-58990415 Msa0173660:CDS 40.0%
GACAATGGTTTATGAGTCAC+AGG + chr1_4:58990612-58990631 None:intergenic 40.0%
GCATATGCAATGGAAATGGA+AGG - chr1_4:58990792-58990811 Msa0173660:CDS 40.0%
CATTCAACCCTCAGATTTGA+TGG - chr1_4:58990848-58990867 Msa0173660:CDS 40.0%
!! AACCATTGGTTCAACCAAAC+TGG - chr1_4:58990945-58990964 Msa0173660:intron 40.0%
TTCCAGTTTGGTTGAACCAA+TGG + chr1_4:58990950-58990969 None:intergenic 40.0%
CATGGTTGTTGATGTTGTTG+TGG + chr1_4:58991012-58991031 None:intergenic 40.0%
TCTGTGGAAACATTGTCAGA+GGG + chr1_4:58991077-58991096 None:intergenic 40.0%
TTCTTCTTGGGGAGGATTAA+TGG - chr1_4:58991145-58991164 Msa0173660:CDS 40.0%
GGTACAAAGTTCATCAATGG+AGG + chr1_4:58991263-58991282 None:intergenic 40.0%
TCTGAGTTTCTGAATGTCCT+TGG + chr1_4:58991360-58991379 None:intergenic 40.0%
! CAGAAACTCAGAGAAGCTTT+TGG - chr1_4:58991368-58991387 Msa0173660:CDS 40.0%
TGGGGTAGAATTGGTGAATA+AGG - chr1_4:58991607-58991626 Msa0173660:five_prime_UTR 40.0%
GTGAAGTGGCAGCTAAGAAA+AGG + chr1_4:58989889-58989908 None:intergenic 45.0%
AGTTCAGTACCTAAGCAAGC+AGG - chr1_4:58990089-58990108 Msa0173660:CDS 45.0%
AAAGATGTGGTAAGAGCTGC+AGG - chr1_4:58990225-58990244 Msa0173660:CDS 45.0%
AAGAGTGATAAGGAGGTCGA+GGG - chr1_4:58990403-58990422 Msa0173660:CDS 45.0%
ATTTCATTGTCTGTCCTCCC+CGG + chr1_4:58990534-58990553 None:intergenic 45.0%
CTCTGTGGAAACATTGTCAG+AGG + chr1_4:58991078-58991097 None:intergenic 45.0%
CTATGAGTGTGGGGTAGAAT+TGG - chr1_4:58991598-58991617 Msa0173660:five_prime_UTR 45.0%
GTGAAGTGGCAGCTAAGAAA+AGG + chr1_4:58989889-58989908 None:intergenic 45.0%
AGTTCAGTACCTAAGCAAGC+AGG - chr1_4:58990089-58990108 Msa0173660:CDS 45.0%
AAAGATGTGGTAAGAGCTGC+AGG - chr1_4:58990225-58990244 Msa0173660:CDS 45.0%
AAGAGTGATAAGGAGGTCGA+GGG - chr1_4:58990403-58990422 Msa0173660:CDS 45.0%
ATTTCATTGTCTGTCCTCCC+CGG + chr1_4:58990534-58990553 None:intergenic 45.0%
CTCTGTGGAAACATTGTCAG+AGG + chr1_4:58991078-58991097 None:intergenic 45.0%
CTATGAGTGTGGGGTAGAAT+TGG - chr1_4:58991598-58991617 Msa0173660:five_prime_UTR 45.0%
CAAGAGTGATAAGGAGGTCG+AGG - chr1_4:58990402-58990421 Msa0173660:CDS 50.0%
TCAAATTGCGGCGCAATTGC+CGG - chr1_4:58990512-58990531 Msa0173660:CDS 50.0%
! GCTGCTAGTTCTCATCTCTG+TGG + chr1_4:58991093-58991112 None:intergenic 50.0%
CAAGAGTGATAAGGAGGTCG+AGG - chr1_4:58990402-58990421 Msa0173660:CDS 50.0%
TCAAATTGCGGCGCAATTGC+CGG - chr1_4:58990512-58990531 Msa0173660:CDS 50.0%
! GCTGCTAGTTCTCATCTCTG+TGG + chr1_4:58991093-58991112 None:intergenic 50.0%
GTGGTAAGAGCTGCAGGCTT+AGG - chr1_4:58990231-58990250 Msa0173660:CDS 55.0%
GTAAGAGCTGCAGGCTTAGG+TGG - chr1_4:58990234-58990253 Msa0173660:CDS 55.0%
CAAATTGCGGCGCAATTGCC+GGG - chr1_4:58990513-58990532 Msa0173660:CDS 55.0%
AAATTGCGGCGCAATTGCCG+GGG - chr1_4:58990514-58990533 Msa0173660:CDS 55.0%
GTGGTAAGAGCTGCAGGCTT+AGG - chr1_4:58990231-58990250 Msa0173660:CDS 55.0%
GTAAGAGCTGCAGGCTTAGG+TGG - chr1_4:58990234-58990253 Msa0173660:CDS 55.0%
CAAATTGCGGCGCAATTGCC+GGG - chr1_4:58990513-58990532 Msa0173660:CDS 55.0%
AAATTGCGGCGCAATTGCCG+GGG - chr1_4:58990514-58990533 Msa0173660:CDS 55.0%
CGAGGGCTCGATCTCACTCT+CGG - chr1_4:58990420-58990439 Msa0173660:CDS 60.0%
CGAGGGCTCGATCTCACTCT+CGG - chr1_4:58990420-58990439 Msa0173660:CDS 60.0%
TTGCGGCGCAATTGCCGGGG+AGG - chr1_4:58990517-58990536 Msa0173660:CDS 70.0%
TTGCGGCGCAATTGCCGGGG+AGG - chr1_4:58990517-58990536 Msa0173660:CDS 70.0%
Chromosome Type Strat End Strand Name
chr1_4 gene 58989761 58991674 58989761 ID=Msa0173660;Name=Msa0173660
chr1_4 mRNA 58989761 58991674 58989761 ID=Msa0173660-mRNA-1;Parent=Msa0173660;Name=Msa0173660-mRNA-1;_AED=0.07;_eAED=0.07;_QI=217|1|1|1|1|1|3|274|385
chr1_4 exon 58989761 58990929 58989761 ID=Msa0173660-mRNA-1:exon:18465;Parent=Msa0173660-mRNA-1
chr1_4 exon 58991087 58991216 58991087 ID=Msa0173660-mRNA-1:exon:18464;Parent=Msa0173660-mRNA-1
chr1_4 exon 58991325 58991674 58991325 ID=Msa0173660-mRNA-1:exon:18463;Parent=Msa0173660-mRNA-1
chr1_4 five_prime_UTR 58991458 58991674 58991458 ID=Msa0173660-mRNA-1:five_prime_utr;Parent=Msa0173660-mRNA-1
chr1_4 CDS 58991325 58991457 58991325 ID=Msa0173660-mRNA-1:cds;Parent=Msa0173660-mRNA-1
chr1_4 CDS 58991087 58991216 58991087 ID=Msa0173660-mRNA-1:cds;Parent=Msa0173660-mRNA-1
chr1_4 CDS 58990035 58990929 58990035 ID=Msa0173660-mRNA-1:cds;Parent=Msa0173660-mRNA-1
chr1_4 three_prime_UTR 58989761 58990034 58989761 ID=Msa0173660-mRNA-1:three_prime_utr;Parent=Msa0173660-mRNA-1
Gene Sequence

>Msa0173660

ATGGGAAGGCACTCATGTTGTTACAAGCAGAAGCTTAGGAAAGGTCTATGGTCACCAGAAGAAGATGAAAAACTACTGAGGCATATAACAAAGTATGGTCATGGATGTTGGAGTTCAGTACCTAAGCAAGCAGGTTTGCAAAGATGTGGTAAGAGCTGCAGGCTTAGGTGGATCAATTACTTAAGACCTGATTTAAAAAGAGGAACATTCTCACAAGAGGAAGAAAATCTCATTGTTGAACTTCATGCAGTACTAGGGAATAGATGGTCTCAAATTGCGGCGCAATTGCCGGGGAGGACAGACAATGAAATAAAGAATTTATGGAACTCTTGTTTGAAGAAGAGACTGAGACAAAAAGGTATAGATCCTGTGACTCATAAACCATTGTCTGAGATTGAGAATAATGGAGAGGAAAATGGTAATAAGAGTCAAGAGAAAGCACCAGAGATATTATTATCCAATGAATTGAACCTTTTGAAATCAGAGAGTTCAAAATCAGATGCAGCTTCTAGCTATGAGCAGAGAACAACATCTTCAATTTCACCAAAAGCATATGCAATGGAAATGGAAGGTTCTTGCAACAAAGAGTTTTTCATAGATAGGTTCATTCAACCCTCAGATTTGATGGGAAATTTTCCACTTCAAATGAGTTATACAAACACTGAAAATGATTGTTTACCAAATGATTCAAACACTAGTAGTAACCATTGGTTCAACCAAACTGGAAAATCTTTTGATATGAATACTGATCAGTTTCATTTCAATCCCACAACAACATCAACAACCATGTTTCTTCCTAATTCTTTTTGCTGCAACAATTCTCTTGATATTCCCTCTGACAATGTTTCCACAGAGATGAGAACTAGCAGCAGCAACACCTTAAACTTACATAACAACAATTTTTCTTCTTGGGGAGGATTAATGGAAAATCATACAGAAGAAGCTAAGTGGGATAATAACTACTTTCAAAACCCTATCTTAATGCTTGCTTCTGAATCTTTATGCAATGAGATAAAGCCTCCATTGATGAACTTTGTACCAGATAGTTTTGGAGCTATTTTACCTCATACAAAGCAAGAACAAGAACAGTCACAAACAACTTCTAATATATTTTCCAAGGACATTCAGAAACTCAGAGAAGCTTTTGGAGATATGTGA
Protein sequence

>Msa0173660

MGRHSCCYKQKLRKGLWSPEEDEKLLRHITKYGHGCWSSVPKQAGLQRCGKSCRLRWINYLRPDLKRGTFSQEEENLIVELHAVLGNRWSQIAAQLPGRTDNEIKNLWNSCLKKRLRQKGIDPVTHKPLSEIENNGEENGNKSQEKAPEILLSNELNLLKSESSKSDAASSYEQRTTSSISPKAYAMEMEGSCNKEFFIDRFIQPSDLMGNFPLQMSYTNTENDCLPNDSNTSSNHWFNQTGKSFDMNTDQFHFNPTTTSTTMFLPNSFCCNNSLDIPSDNVSTEMRTSSSNTLNLHNNNFSSWGGLMENHTEEAKWDNNYFQNPILMLASESLCNEIKPPLMNFVPDSFGAILPHTKQEQEQSQTTSNIFSKDIQKLREAFGDM*