AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar zhongmu-4 / Msa1454790

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa1454790 MtrunA17_Chr1g0157081 92.269 789 50 4 1 779 1 788 0.0 1488
Msa1454790 MtrunA17_Chr1g0210801 24.703 421 293 12 119 534 77 478 3.05e-23 104
Msa1454790 MtrunA17_Chr1g0210801 23.588 301 218 5 251 549 133 423 3.14e-14 76.3
Msa1454790 MtrunA17_Chr2g0292711 24.353 464 272 17 130 526 170 621 4.06e-17 85.9
Msa1454790 MtrunA17_Chr3g0136851 22.636 349 254 6 191 537 280 614 4.23e-16 83.2
Msa1454790 MtrunA17_Chr3g0143411 23.701 308 213 8 187 489 149 439 1.38e-15 80.5
Msa1454790 MtrunA17_Chr3g0126821 26.333 300 203 7 214 506 204 492 4.87e-15 79.0
Msa1454790 MtrunA17_Chr7g0257471 24.062 320 223 8 202 517 439 742 2.03e-14 77.4
Msa1454790 MtrunA17_Chr2g0285331 22.478 347 240 10 151 487 166 493 2.59e-14 77.0
Msa1454790 MtrunA17_Chr4g0038401 22.157 343 249 7 203 542 310 637 2.75e-14 77.0
Msa1454790 MtrunA17_Chr4g0038401 22.090 335 243 9 203 534 450 769 1.38e-11 68.2
Msa1454790 MtrunA17_Chr4g0038401 21.053 380 243 8 162 537 480 806 8.31e-11 65.9
Msa1454790 MtrunA17_Chr1g0211881 27.273 198 131 5 172 369 306 490 3.95e-14 75.9
Msa1454790 MtrunA17_Chr2g0304071 23.529 391 264 13 157 536 484 850 7.89e-14 75.5
Msa1454790 MtrunA17_Chr6g0482571 22.112 303 215 6 235 522 58 354 2.00e-13 73.2
Msa1454790 MtrunA17_Chr8g0375231 25.220 341 215 10 190 498 263 595 2.09e-13 73.9
Msa1454790 MtrunA17_Chr8g0375231 21.245 273 204 5 305 571 226 493 1.19e-11 68.6
Msa1454790 MtrunA17_Chr3g0091741 21.429 350 220 7 197 498 139 481 2.30e-13 73.6
Msa1454790 MtrunA17_Chr6g0473331 23.939 330 229 8 210 534 124 436 2.51e-13 73.6
Msa1454790 MtrunA17_Chr6g0473351 23.636 330 227 8 210 534 86 395 2.52e-13 73.6
Msa1454790 MtrunA17_Chr1g0147171 24.159 327 231 9 211 534 174 486 2.61e-13 73.6
Msa1454790 MtrunA17_Chr7g0218641 22.857 350 252 7 235 582 215 548 2.95e-13 73.2
Msa1454790 MtrunA17_Chr1g0160881 22.086 326 240 7 193 517 289 601 3.30e-13 73.6
Msa1454790 MtrunA17_Chr8g0369641 23.662 355 246 10 187 534 321 657 3.34e-13 73.6
Msa1454790 MtrunA17_Chr7g0257371 22.727 418 293 10 136 543 140 537 3.41e-13 73.6
Msa1454790 MtrunA17_Chr3g0085871 21.975 314 226 7 151 461 123 420 3.88e-13 73.2
Msa1454790 MtrunA17_Chr6g0473431 22.796 329 231 8 210 534 89 398 5.30e-13 72.4
Msa1454790 MtrunA17_Chr1g0211431 25.938 320 218 8 195 506 182 490 5.45e-13 72.4
Msa1454790 MtrunA17_Chr2g0297991 21.016 433 255 14 86 494 98 467 7.15e-13 72.4
Msa1454790 MtrunA17_Chr6g0482541 21.379 290 215 6 235 522 58 336 7.77e-13 71.2
Msa1454790 MtrunA17_Chr6g0473491 23.810 294 203 7 210 498 86 363 9.57e-13 71.6
Msa1454790 MtrunA17_Chr5g0396041 22.222 306 223 5 197 499 280 573 1.23e-12 72.0
Msa1454790 MtrunA17_Chr6g0478551 20.755 318 222 9 225 532 29 326 1.39e-12 70.9
Msa1454790 MtrunA17_Chr6g0473251 20.724 304 226 6 235 534 36 328 1.87e-12 70.5
Msa1454790 MtrunA17_Chr6g0473251 23.630 292 206 7 210 498 86 363 7.44e-12 68.6
Msa1454790 MtrunA17_Chr1g0182521 24.485 388 259 11 152 534 115 473 2.59e-12 70.5
Msa1454790 MtrunA17_Chr4g0033981 23.496 349 243 11 115 459 292 620 3.04e-12 70.1
Msa1454790 MtrunA17_Chr4g0033981 21.299 385 271 8 132 498 223 593 1.60e-11 67.8
Msa1454790 MtrunA17_Chr5g0395201 21.277 376 266 9 141 498 454 817 3.50e-12 70.5
Msa1454790 MtrunA17_Chr4g0037841 23.602 322 182 10 187 499 279 545 3.71e-12 69.7
Msa1454790 MtrunA17_Chr8g0390501 22.084 403 275 11 181 578 123 491 4.57e-12 69.7
Msa1454790 MtrunA17_Chr1g0148281 24.399 291 174 7 250 537 160 407 6.12e-12 68.9
Msa1454790 MtrunA17_Chr7g0241721 22.687 335 237 10 214 543 20 337 6.73e-12 68.9
Msa1454790 MtrunA17_Chr1g0200211 21.466 382 285 8 162 542 228 595 8.00e-12 68.9
Msa1454790 MtrunA17_Chr8g0391651 24.554 224 161 4 315 534 294 513 9.47e-12 68.6
Msa1454790 MtrunA17_Chr6g0473441 23.154 298 200 8 210 498 86 363 1.02e-11 68.2
Msa1454790 MtrunA17_Chr6g0473481 22.789 294 206 7 210 498 86 363 1.05e-11 68.2
Msa1454790 MtrunA17_Chr6g0473511 22.789 294 206 7 210 498 86 363 1.05e-11 68.2
Msa1454790 MtrunA17_Chr8g0392911 21.287 404 248 10 203 542 77 474 1.09e-11 68.6
Msa1454790 MtrunA17_Chr7g0215561 23.667 300 213 8 202 498 296 582 1.22e-11 68.2
Msa1454790 MtrunA17_Chr6g0473261 22.789 294 206 7 210 498 134 411 1.28e-11 68.2
Msa1454790 MtrunA17_Chr5g0446031 23.729 354 248 8 152 500 384 720 1.30e-11 68.6
Msa1454790 MtrunA17_Chr1g0193151 22.963 270 191 7 249 515 158 413 1.40e-11 68.2
Msa1454790 MtrunA17_Chr6g0478691 23.684 342 237 13 208 543 95 418 2.25e-11 67.4
Msa1454790 MtrunA17_Chr6g0482971 24.161 298 198 9 210 498 82 360 2.26e-11 67.0
Msa1454790 MtrunA17_Chr7g0214351 22.742 299 217 6 202 498 297 583 2.30e-11 67.4
Msa1454790 MtrunA17_Chr4g0048611 22.792 351 241 11 203 543 138 468 3.13e-11 67.0
Msa1454790 MtrunA17_Chr4g0060341 23.125 320 186 9 187 499 279 545 3.30e-11 66.6
Msa1454790 MtrunA17_Chr8g0381361 20.513 351 252 9 191 534 125 455 3.43e-11 66.6
Msa1454790 MtrunA17_Chr6g0482771 22.491 289 214 5 235 522 107 386 3.52e-11 66.6
Msa1454790 MtrunA17_Chr4g0039041 21.250 320 227 8 187 499 435 736 3.67e-11 67.0
Msa1454790 MtrunA17_Chr3g0102961 24.545 220 156 5 322 536 128 342 3.95e-11 66.2
Msa1454790 MtrunA17_Chr6g0472611 22.727 330 233 7 210 534 92 404 4.76e-11 66.2
Msa1454790 MtrunA17_Chr6g0471531 23.077 325 237 6 235 558 235 547 5.00e-11 66.2
Msa1454790 MtrunA17_Chr7g0246931 23.948 309 225 6 232 539 223 522 5.49e-11 65.9
Msa1454790 MtrunA17_Chr6g0482751 22.018 327 241 6 210 535 91 404 6.47e-11 65.9
Msa1454790 MtrunA17_Chr4g0052491 20.391 358 265 7 147 498 145 488 7.19e-11 65.9
Msa1454790 MtrunA17_Chr1g0168761 23.292 322 225 9 218 534 86 390 7.20e-11 65.5
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa1454790 AT2G15820.1 53.741 802 330 8 14 778 39 836 0.0 858
Msa1454790 AT2G35130.3 21.585 366 274 6 167 531 141 494 5.49e-16 82.4
Msa1454790 AT2G31400.1 23.118 372 272 8 135 504 186 545 8.10e-16 82.4
Msa1454790 AT2G31400.2 23.118 372 272 8 135 504 186 545 9.25e-16 82.4
Msa1454790 AT2G35130.2 21.409 369 274 7 167 531 163 519 9.70e-15 78.6
Msa1454790 AT5G61990.1 23.262 374 265 9 185 549 596 956 9.87e-15 79.0
Msa1454790 AT2G35130.1 21.409 369 274 7 167 531 141 497 1.32e-14 78.2
Msa1454790 AT1G09680.1 23.906 297 212 6 149 445 280 562 1.78e-14 77.8
Msa1454790 AT1G09680.1 21.765 340 242 9 193 526 252 573 7.27e-13 72.4
Msa1454790 AT1G09680.1 20.672 387 263 7 163 542 100 449 1.10e-11 68.9
Msa1454790 AT1G63400.1 22.581 372 259 11 172 536 181 530 4.24e-14 76.3
Msa1454790 AT5G64320.1 22.857 315 224 8 210 522 316 613 4.26e-14 76.6
Msa1454790 AT5G04810.1 21.448 359 263 8 178 534 309 650 1.24e-13 75.5
Msa1454790 AT5G04810.2 21.448 359 263 8 178 534 309 650 1.48e-13 75.1
Msa1454790 AT5G01110.1 22.302 417 299 11 117 527 242 639 1.51e-13 75.1
Msa1454790 AT5G01110.2 22.302 417 299 11 117 527 270 667 1.82e-13 74.7
Msa1454790 AT4G20090.2 22.156 334 243 7 187 516 263 583 2.98e-13 73.9
Msa1454790 AT4G20090.1 22.156 334 243 7 187 516 263 583 2.98e-13 73.9
Msa1454790 AT1G63130.1 23.460 341 232 11 203 536 208 526 3.14e-13 73.9
Msa1454790 AT1G63130.2 23.460 341 232 11 203 536 208 526 3.14e-13 73.9
Msa1454790 AT3G16710.1 22.006 309 215 9 235 536 169 458 4.52e-13 72.8
Msa1454790 AT5G55840.2 23.256 430 293 15 119 536 277 681 5.46e-13 73.6
Msa1454790 AT5G55840.1 23.256 430 293 15 119 536 277 681 5.46e-13 73.6
Msa1454790 AT5G55840.3 23.256 430 293 15 119 536 237 641 5.49e-13 73.6
Msa1454790 AT3G48810.1 26.493 268 169 10 278 534 128 378 5.73e-13 73.2
Msa1454790 AT3G54980.1 22.667 375 255 11 167 537 270 613 7.14e-13 72.8
Msa1454790 AT3G54980.2 22.667 375 255 11 167 537 270 613 7.14e-13 72.8
Msa1454790 AT1G20300.1 22.753 356 254 9 187 538 157 495 9.85e-13 72.0
Msa1454790 AT1G31840.1 22.741 321 229 8 235 550 512 818 1.14e-12 72.4
Msa1454790 AT3G16010.1 20.270 444 303 11 138 542 117 548 1.26e-12 72.0
Msa1454790 AT2G17140.1 22.841 359 253 9 193 543 124 466 1.66e-12 71.6
Msa1454790 AT2G17140.1 22.255 337 248 7 201 534 167 492 3.94e-12 70.5
Msa1454790 AT2G17140.2 22.841 359 253 9 193 543 124 466 1.66e-12 71.6
Msa1454790 AT2G17140.2 22.255 337 248 7 201 534 167 492 3.94e-12 70.5
Msa1454790 AT1G09900.1 21.875 352 241 8 191 534 150 475 1.67e-12 71.2
Msa1454790 AT3G18110.1 23.301 309 225 5 196 502 240 538 1.95e-12 71.6
Msa1454790 AT5G02860.1 24.695 328 193 9 203 491 476 788 2.34e-12 71.2
Msa1454790 AT5G02860.4 24.695 328 193 9 203 491 476 788 2.34e-12 71.2
Msa1454790 AT5G02860.2 24.695 328 193 9 203 491 476 788 2.34e-12 71.2
Msa1454790 AT5G02860.5 24.695 328 193 9 203 491 476 788 2.34e-12 71.2
Msa1454790 AT5G02860.3 24.695 328 193 9 203 491 476 788 2.34e-12 71.2
Msa1454790 AT1G62590.2 22.581 372 259 11 172 536 181 530 6.31e-12 69.7
Msa1454790 AT1G62590.1 22.581 372 259 11 172 536 181 530 6.31e-12 69.7
Msa1454790 AT1G13040.2 22.414 348 255 8 189 534 122 456 8.07e-12 68.9
Msa1454790 AT1G13040.1 22.414 348 255 8 189 534 122 456 8.07e-12 68.9
Msa1454790 AT1G12775.1 21.587 315 228 6 233 542 277 577 8.94e-12 69.3
Msa1454790 AT2G39230.1 20.824 437 295 10 117 534 387 791 1.08e-11 68.9
Msa1454790 AT2G39230.1 20.403 397 291 11 148 537 241 619 5.67e-11 66.6
Msa1454790 AT1G06710.7 22.287 341 233 10 196 518 463 789 1.21e-11 68.9
Msa1454790 AT1G06710.1 22.287 341 233 10 196 518 463 789 1.21e-11 68.9
Msa1454790 AT1G06710.9 22.287 341 233 10 196 518 463 789 1.21e-11 68.9
Msa1454790 AT1G06710.4 22.287 341 233 10 196 518 463 789 1.21e-11 68.9
Msa1454790 AT1G06710.13 22.287 341 233 10 196 518 463 789 1.21e-11 68.9
Msa1454790 AT1G06710.3 22.287 341 233 10 196 518 463 789 1.21e-11 68.9
Msa1454790 AT1G06710.8 22.287 341 233 10 196 518 463 789 1.21e-11 68.9
Msa1454790 AT1G06710.2 22.287 341 233 10 196 518 463 789 1.21e-11 68.9
Msa1454790 AT1G06710.19 22.287 341 233 10 196 518 463 789 1.21e-11 68.9
Msa1454790 AT1G06710.5 22.287 341 233 10 196 518 463 789 1.21e-11 68.9
Msa1454790 AT1G06710.6 22.287 341 233 10 196 518 463 789 1.21e-11 68.9
Msa1454790 AT1G06710.12 22.287 341 233 10 196 518 463 789 1.21e-11 68.9
Msa1454790 AT1G66345.1 20.207 386 292 8 151 534 169 540 1.24e-11 68.6
Msa1454790 AT5G41170.2 21.726 336 244 8 211 542 137 457 1.36e-11 68.2
Msa1454790 AT1G06710.15 22.287 341 233 10 196 518 463 789 1.41e-11 68.9
Msa1454790 AT1G06710.18 22.287 341 233 10 196 518 463 789 1.41e-11 68.9
Msa1454790 AT1G06710.17 22.287 341 233 10 196 518 463 789 1.41e-11 68.9
Msa1454790 AT1G06710.14 22.287 341 233 10 196 518 463 789 1.41e-11 68.9
Msa1454790 AT1G06710.16 22.287 341 233 10 196 518 463 789 1.41e-11 68.9
Msa1454790 AT1G06710.10 22.287 341 233 10 196 518 463 789 1.41e-11 68.9
Msa1454790 AT1G06710.11 22.287 341 233 10 196 518 463 789 1.41e-11 68.9
Msa1454790 AT5G41170.1 21.726 336 244 8 211 542 137 457 1.48e-11 68.2
Msa1454790 AT3G61520.1 19.718 426 319 7 111 527 260 671 1.51e-11 68.6
Msa1454790 AT1G63330.3 22.312 372 260 11 172 536 106 455 1.57e-11 68.2
Msa1454790 AT1G63330.1 22.312 372 260 11 172 536 106 455 1.57e-11 68.2
Msa1454790 AT1G63330.2 22.312 372 260 11 172 536 106 455 1.57e-11 68.2
Msa1454790 AT1G12620.1 20.130 308 227 6 232 534 260 553 1.67e-11 68.2
Msa1454790 AT5G41170.3 21.726 336 244 8 211 542 37 357 1.70e-11 67.8
Msa1454790 AT2G15630.1 21.287 404 285 9 120 514 235 614 1.84e-11 68.2
Msa1454790 AT5G28370.1 21.212 231 175 2 298 527 447 671 2.07e-11 68.2
Msa1454790 AT5G28460.1 19.718 426 319 7 111 527 260 671 2.34e-11 67.8
Msa1454790 AT3G16710.2 20.833 288 209 6 235 517 169 442 2.51e-11 67.0
Msa1454790 AT4G39620.2 22.581 279 205 6 259 531 133 406 2.64e-11 67.4
Msa1454790 AT4G19440.4 21.569 459 339 9 77 532 382 822 2.68e-11 67.8
Msa1454790 AT4G19440.2 21.569 459 339 9 77 532 382 822 2.68e-11 67.8
Msa1454790 AT4G19440.3 21.569 459 339 9 77 532 382 822 2.68e-11 67.8
Msa1454790 AT4G19440.1 21.569 459 339 9 77 532 382 822 2.68e-11 67.8
Msa1454790 AT3G53700.1 21.471 340 240 7 203 534 211 531 2.95e-11 67.8
Msa1454790 AT3G53700.1 19.023 389 293 8 160 542 62 434 9.48e-11 65.9
Msa1454790 AT4G39620.1 22.581 279 205 6 259 531 133 406 4.16e-11 67.0
Msa1454790 AT3G22470.2 22.292 480 320 17 73 536 48 490 4.87e-11 66.6
Msa1454790 AT1G09820.1 22.222 378 260 11 158 522 199 555 5.40e-11 66.6
Msa1454790 AT1G62720.1 22.591 301 210 9 237 533 157 438 5.78e-11 66.2
Msa1454790 AT1G62670.2 20.789 380 242 13 196 534 201 562 6.55e-11 66.2
Msa1454790 AT1G62670.1 20.789 380 242 13 196 534 201 562 6.55e-11 66.2
Msa1454790 AT4G30825.1 23.404 235 169 4 293 522 624 852 9.90e-11 65.9

Find 219 sgRNAs with CRISPR-Local

Find 293 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
TGAAGAGAGGTTAGGGTTTA+AGG 0.082041 tig0035440:-4732 None:intergenic
CATCAATTTCATACTTATTT+TGG 0.134963 tig0035440:-7011 None:intergenic
GGTATTCTGGATTGGTATTC+TGG 0.195897 tig0035440:+7578 Msa1454790:CDS
ATATTTATGGTGGCCTAATT+TGG 0.196709 tig0035440:+6296 Msa1454790:CDS
TACAACTTGGTTCTGGAAAT+TGG 0.196797 tig0035440:+7608 Msa1454790:CDS
ACCATTGCAAGCTCTCATTT+TGG 0.235787 tig0035440:+7330 Msa1454790:CDS
TGAAATTGATGCCCCATTAA+TGG 0.248077 tig0035440:+7023 Msa1454790:CDS
TTCTATTCTTTCTTTGTCTA+TGG 0.251309 tig0035440:-6338 None:intergenic
TATGGAATCACATGATAAAT+TGG 0.256096 tig0035440:+6756 Msa1454790:CDS
CAAAATTGAAATGGATAATA+TGG 0.269995 tig0035440:-7188 None:intergenic
CATGATTGATTCTGCAAATT+CGG 0.273446 tig0035440:-6662 None:intergenic
ACTAAACATGTACTTCAATA+TGG 0.284965 tig0035440:+6738 Msa1454790:CDS
CACCTTGTGTTCTTGCATAC+TGG 0.289141 tig0035440:+7421 Msa1454790:CDS
GATAGCTATGCAGCCAAATT+AGG 0.290210 tig0035440:-6309 None:intergenic
TAGTATATATTTAGATTCTT+TGG 0.296485 tig0035440:+6831 Msa1454790:CDS
GAAAGCGGCGGAGGTGGAGG+AGG 0.302585 tig0035440:-4826 None:intergenic
GCTTTCAAACTGCAAAAGTT+TGG 0.303946 tig0035440:-6476 None:intergenic
TTCTTCTGTTCAAGGTTGTT+TGG 0.305268 tig0035440:+6090 Msa1454790:CDS
AACCACCTATGAACAAGTTT+TGG 0.306684 tig0035440:-7396 None:intergenic
CTTACATCTTCAAGAATATA+TGG 0.308293 tig0035440:-7636 None:intergenic
ATACTATATATAACACTATT+AGG 0.314376 tig0035440:-6814 None:intergenic
AAGGGAGGGTGCGAGGTAGG+TGG 0.317009 tig0035440:-4802 None:intergenic
AATTTGGCTGCATAGCTATC+AGG 0.319175 tig0035440:+6312 Msa1454790:CDS
TACCTTAGTTCTTCTGTTCA+AGG 0.335736 tig0035440:+6082 Msa1454790:CDS
TCCCTTGACTTTACAATCAA+TGG 0.337999 tig0035440:-7547 None:intergenic
TCTGTTCTTTATTTAACTTC+AGG 0.342578 tig0035440:-7101 None:intergenic
GCGAGAACGAAACCGCGTTT+AGG 0.343042 tig0035440:+5152 Msa1454790:CDS
AGGGAAAGGGAAAGGTATTC+TGG 0.343457 tig0035440:+7565 Msa1454790:CDS
CAGAGTTGCTTGGCTTTGTA+AGG 0.349174 tig0035440:+5021 Msa1454790:CDS
ATATTCAGGAAATCACTTAA+AGG 0.349756 tig0035440:+6963 Msa1454790:CDS
GGTAAGCCACAATCAATATA+TGG 0.352346 tig0035440:-6063 None:intergenic
AGGAGGGAAGGGAGGGTGCG+AGG 0.357265 tig0035440:-4809 None:intergenic
GGGAAGGGAGGGTGCGAGGT+AGG 0.358497 tig0035440:-4805 None:intergenic
TTAAGTGATTTCCTGAATAT+AGG 0.360058 tig0035440:-6960 None:intergenic
GCAATGGTGCAAAACTTATC+TGG 0.373004 tig0035440:-7315 None:intergenic
CAATTCCAAAACTTGTTCAT+AGG 0.373747 tig0035440:+7391 Msa1454790:CDS
ATAAGGCGGGGACTTTGATT+AGG 0.373927 tig0035440:+5056 Msa1454790:CDS
GGGGAAAGCGGCGGAGGTGG+AGG 0.383548 tig0035440:-4829 None:intergenic
TTATTTAACTTCAGGCTCAT+TGG 0.384361 tig0035440:-7093 None:intergenic
CTGCGCAAGGGAGGGTGAGG+TGG 0.385546 tig0035440:+6432 Msa1454790:CDS
GGAATTGTAGGTTGACCATT+TGG 0.387144 tig0035440:-7375 None:intergenic
TTGGCTTTGTAAGGAGTTAC+CGG 0.390410 tig0035440:+5030 Msa1454790:CDS
TTACATGGATACCTATATTC+AGG 0.393280 tig0035440:+6949 Msa1454790:CDS
CGAGAACGAAACCGCGTTTA+GGG 0.394042 tig0035440:+5153 Msa1454790:CDS
TTAGATTCTTTGGTGAAAGT+TGG 0.397946 tig0035440:+6841 Msa1454790:CDS
GAAGCAATACAACTTGGTTC+TGG 0.398600 tig0035440:+7601 Msa1454790:CDS
AATAAACATATGATGGTGTA+AGG 0.401918 tig0035440:-6714 None:intergenic
ATTCCACCGAATGATTCAAT+TGG 0.404834 tig0035440:+6129 Msa1454790:CDS
ACCATTTGGCCAAAACTGAT+TGG 0.407953 tig0035440:-7361 None:intergenic
TGAGGGGAAAGCGGCGGAGG+TGG 0.408758 tig0035440:-4832 None:intergenic
GAACGCATTGAAGAGAGGTT+AGG 0.409774 tig0035440:-4740 None:intergenic
TAAGGAGTTACCGGCGCATA+AGG 0.411126 tig0035440:+5039 Msa1454790:CDS
TGAGTTTATATATCATCGTT+TGG 0.412181 tig0035440:+6246 Msa1454790:CDS
CGGCGGAGGTGGAGGAGGGA+AGG 0.412326 tig0035440:-4821 None:intergenic
AATTGCCATCAAAATTGAAA+TGG 0.413559 tig0035440:-7197 None:intergenic
TGTTGTCAGGAAGGTCTTGA+TGG 0.413959 tig0035440:-4886 None:intergenic
GAACAGAGAGAAATACTGAT+TGG 0.415232 tig0035440:+7117 Msa1454790:CDS
CAAAATGGAAGTCCACTCTA+AGG 0.416614 tig0035440:+6525 Msa1454790:CDS
ATATAAACTCAGCTTGCTTA+AGG 0.416737 tig0035440:-6234 None:intergenic
AATATCTCCAAGGACTTCAT+AGG 0.423483 tig0035440:-6556 None:intergenic
AAACAAGCGGCTGCCGCGTC+CGG 0.426245 tig0035440:+4949 Msa1454790:CDS
GGAGGTGGAGGAGGGAAGGG+AGG 0.427269 tig0035440:-4817 None:intergenic
CGCAAGGGAGGGTGAGGTGG+AGG 0.427987 tig0035440:+6435 Msa1454790:CDS
GTTATGACTGAAGTTGAAAC+AGG 0.434447 tig0035440:-4704 None:intergenic
CTTACAAAGCCAAGCAACTC+TGG 0.435872 tig0035440:-5020 None:intergenic
CGCTTTCCCCTCAACTGCGT+TGG 0.436892 tig0035440:+4842 Msa1454790:CDS
TAAGGGAAGTCGTGAGGGTG+TGG 0.438002 tig0035440:+7494 Msa1454790:CDS
CCGTTTCGCAGGGGTGGAGG+AGG 0.438291 tig0035440:+4919 Msa1454790:CDS
TTTGATGATATTATCAATCA+AGG 0.443335 tig0035440:+6016 Msa1454790:CDS
TATATGGAACGTGGACTCGC+TGG 0.444107 tig0035440:-6047 None:intergenic
TATCATCGTTTGGTTACAAA+TGG 0.445733 tig0035440:+6256 Msa1454790:CDS
CACCTCACCCTCCCTTGCGC+AGG 0.446373 tig0035440:-6431 None:intergenic
GTATTCTGGATTGGTATTCT+GGG 0.446524 tig0035440:+7579 Msa1454790:CDS
TAAGATGATGTTACATGATC+GGG 0.446858 tig0035440:-6929 None:intergenic
GGTGCGAGGTAGGTGGAGAG+TGG 0.452022 tig0035440:-4795 None:intergenic
GGCCTGCGCAAGGGAGGGTG+AGG 0.455036 tig0035440:+6429 Msa1454790:CDS
TTCTGAATGGGCAGAGGAAG+TGG 0.455423 tig0035440:+5080 Msa1454790:CDS
GATGTAGCCACTCATAAAAC+TGG 0.455806 tig0035440:-7257 None:intergenic
CTTGAGGGCCTGCGCAAGGG+AGG 0.458248 tig0035440:+6423 Msa1454790:CDS
GGCGGAGGTGGAGGAGGGAA+GGG 0.460362 tig0035440:-4820 None:intergenic
TGGAGGAAGCAGAGAAAACT+TGG 0.461017 tig0035440:+6452 Msa1454790:CDS
GCTTAGTAGTATGCCGGACT+AGG 0.464778 tig0035440:+7799 Msa1454790:three_prime_UTR
CCTGCTTAAAGGTATACAAA+TGG 0.464867 tig0035440:+5894 Msa1454790:intron
AACGCATTGAAGAGAGGTTA+GGG 0.465533 tig0035440:-4739 None:intergenic
GATGTGCATAAAGATATTTA+TGG 0.465782 tig0035440:+6283 Msa1454790:CDS
TACTTGCATCACGAAACATT+TGG 0.467025 tig0035440:-6894 None:intergenic
CGGAAAATATCGTTGTTGTC+AGG 0.473397 tig0035440:-4899 None:intergenic
TGAGTGAGGTGCCGGAGCTA+TGG 0.474011 tig0035440:+4990 Msa1454790:CDS
AAGTTGAAACTAGGTAAGAT+AGG 0.481244 tig0035440:+6589 Msa1454790:CDS
AGTTGAGGGGAAAGCGGCGG+AGG 0.482626 tig0035440:-4835 None:intergenic
TTTCCGTTTCGCAGGGGTGG+AGG 0.485521 tig0035440:+4916 Msa1454790:CDS
AGGTAGGTGGAGAGTGGAGA+GGG 0.485808 tig0035440:-4789 None:intergenic
GGAGGGCATCGAAATTCATC+GGG 0.486854 tig0035440:+7453 Msa1454790:CDS
TGTACACAAAAGCCTGTGAT+GGG 0.487794 tig0035440:-6504 None:intergenic
GAGTTACCGGCGCATAAGGC+GGG 0.488242 tig0035440:+5043 Msa1454790:CDS
GGCGGAGGTCCAGAGTTGCT+TGG 0.489260 tig0035440:+5011 Msa1454790:CDS
AACAGAGAGAAATACTGATT+GGG 0.489307 tig0035440:+7118 Msa1454790:CDS
ATCCACCCAATTGAATCATT+CGG 0.490712 tig0035440:-6135 None:intergenic
GTTGGTAAAATTGACAAGGC+TGG 0.491220 tig0035440:+6859 Msa1454790:CDS
CCTCCTCCACCCCTGCGAAA+CGG 0.494210 tig0035440:-4919 None:intergenic
CTGATTGGGATGCTTCTAGC+TGG 0.494346 tig0035440:+7132 Msa1454790:CDS
CGACGTTGCCAACGCAGTTG+AGG 0.494450 tig0035440:-4850 None:intergenic
TTCCACCGAATGATTCAATT+GGG 0.494453 tig0035440:+6130 Msa1454790:CDS
TGTAAAAGCATAACCTAGTC+CGG 0.496618 tig0035440:-7812 None:intergenic
TACTGCTTTGAAAAGTTCCC+TGG 0.496818 tig0035440:-6211 None:intergenic
AACTCCTTCACATCAACCTC+CGG 0.497765 tig0035440:-4968 None:intergenic
TTTAGTAAATAAACATATGA+TGG 0.501648 tig0035440:-6721 None:intergenic
GTCCATTGATTGTAAAGTCA+AGG 0.503337 tig0035440:+7545 Msa1454790:CDS
TACTAGGCTAGCAGATTACA+TGG 0.508890 tig0035440:+5958 Msa1454790:CDS
GACGTTGCCAACGCAGTTGA+GGG 0.508945 tig0035440:-4849 None:intergenic
CGATCTTGAGGGCCTGCGCA+AGG 0.509240 tig0035440:+6419 Msa1454790:CDS
ACTTTGATTAGGATTCTGAA+TGG 0.510245 tig0035440:+5067 Msa1454790:CDS
AGATCGATACTAGCACCTCT+TGG 0.514257 tig0035440:-6402 None:intergenic
CTTGCATACTGGTACATGTA+TGG 0.514271 tig0035440:+7432 Msa1454790:CDS
AACCTTGAACAGAAGAACTA+AGG 0.520036 tig0035440:-6084 None:intergenic
GATTGTAAAGTCAAGGGAAA+GGG 0.520477 tig0035440:+7552 Msa1454790:CDS
CACGTTCCATATATTGATTG+TGG 0.521967 tig0035440:+6057 Msa1454790:CDS
TTGTACACAAAAGCCTGTGA+TGG 0.523890 tig0035440:-6505 None:intergenic
AGGTGTGAATATAATGAGAC+AGG 0.525973 tig0035440:+7674 Msa1454790:CDS
AAAGCGGCGGAGGTGGAGGA+GGG 0.527007 tig0035440:-4825 None:intergenic
TGATGCAACGGAGTTGGTAT+CGG 0.527693 tig0035440:+5918 Msa1454790:CDS
GATCTTGAGGGCCTGCGCAA+GGG 0.528756 tig0035440:+6420 Msa1454790:CDS
GTAAGATGATGTTACATGAT+CGG 0.529110 tig0035440:-6930 None:intergenic
GAGTGGAGAGGGTAAGATTG+CGG 0.530705 tig0035440:-4778 None:intergenic
ACTGCAATGATGATCATAGT+TGG 0.532948 tig0035440:+7760 Msa1454790:three_prime_UTR
ATGTTCTCACTGTCACCACT+TGG 0.533528 tig0035440:-7291 None:intergenic
TCATGTAACATCATCTTACA+TGG 0.535360 tig0035440:+6934 Msa1454790:CDS
GCAGAGGAAGTGGTTGAGGC+AGG 0.535779 tig0035440:+5090 Msa1454790:CDS
TGGAGGGCATCGAAATTCAT+CGG 0.541168 tig0035440:+7452 Msa1454790:CDS
AAATATCTTTATGCACATCA+AGG 0.541678 tig0035440:-6279 None:intergenic
AAGGGAAAGGTATTCTGGAT+TGG 0.541846 tig0035440:+7570 Msa1454790:CDS
GTAAGAGATTTCACTAAGGC+AGG 0.542553 tig0035440:+7654 Msa1454790:CDS
TGGTATGCCTATGAAGTCCT+TGG 0.542710 tig0035440:+6549 Msa1454790:CDS
CGCTTATAAGAGCTTTGAAG+AGG 0.543004 tig0035440:-6186 None:intergenic
ATGGGCAGAGGAAGTGGTTG+AGG 0.545504 tig0035440:+5086 Msa1454790:CDS
TCACCACTTGGCTTAGAAGT+AGG 0.546193 tig0035440:-7279 None:intergenic
AGAGAAATGAAGTTGAAACT+AGG 0.546888 tig0035440:+6580 Msa1454790:CDS
GCGTCCGGAGGTTGATGTGA+AGG 0.547281 tig0035440:+4964 Msa1454790:CDS
AGGTGCTAGTATCGATCTTG+AGG 0.547318 tig0035440:+6407 Msa1454790:CDS
CTGGACCTCCGCCATAGCTC+CGG 0.547816 tig0035440:-5001 None:intergenic
AATGGATGATGCAACGGAGT+TGG 0.551069 tig0035440:+5912 Msa1454790:CDS
GACTTTACAATCAATGGACA+TGG 0.551655 tig0035440:-7541 None:intergenic
AGTGATCAAAATATTCAAGA+AGG 0.552152 tig0035440:-7925 None:intergenic
ATCACATGATAAATTGGAAG+AGG 0.554760 tig0035440:+6762 Msa1454790:CDS
GGTGCTAGTATCGATCTTGA+GGG 0.554891 tig0035440:+6408 Msa1454790:CDS
ATATGGAACGTGGACTCGCT+GGG 0.555396 tig0035440:-6046 None:intergenic
CACCGAATGATTCAATTGGG+TGG 0.555489 tig0035440:+6133 Msa1454790:CDS
TTCTGGGAAGCAATACAACT+TGG 0.555919 tig0035440:+7595 Msa1454790:CDS
TTCCAAAACTTGTTCATAGG+TGG 0.558137 tig0035440:+7394 Msa1454790:CDS
TCCATTGATTGTAAAGTCAA+GGG 0.563781 tig0035440:+7546 Msa1454790:CDS
TAAACATATGATGGTGTAAG+GGG 0.566401 tig0035440:-6712 None:intergenic
CTTTGATTAGGATTCTGAAT+GGG 0.569163 tig0035440:+5068 Msa1454790:CDS
GAGGTGGAGGAGGGAAGGGA+GGG 0.570271 tig0035440:-4816 None:intergenic
TACACAAAAGCCTGTGATGG+GGG 0.572867 tig0035440:-6502 None:intergenic
TAAAGTCAAGGGAAAGGGAA+AGG 0.573314 tig0035440:+7557 Msa1454790:CDS
ATGGAAGTCCACTCTAAGGT+TGG 0.573408 tig0035440:+6529 Msa1454790:CDS
ACGTGGACTCGCTGGGAACA+CGG 0.577330 tig0035440:-6039 None:intergenic
CAAGCGGCTGCCGCGTCCGG+AGG 0.577693 tig0035440:+4952 Msa1454790:CDS
GTGAGGTGCCGGAGCTATGG+CGG 0.580371 tig0035440:+4993 Msa1454790:CDS
ATAAACATATGATGGTGTAA+GGG 0.580524 tig0035440:-6713 None:intergenic
ATATCATTATGCATTGCTTG+CGG 0.581518 tig0035440:+5125 Msa1454790:CDS
AAAGTCCCCGCCTTATGCGC+CGG 0.582323 tig0035440:-5049 None:intergenic
TTGAGGGCCTGCGCAAGGGA+GGG 0.586695 tig0035440:+6424 Msa1454790:CDS
AAAGCTCTTATAAGCGAACC+AGG 0.587841 tig0035440:+6193 Msa1454790:CDS
GCCAAAATGAGAGCTTGCAA+TGG 0.588265 tig0035440:-7331 None:intergenic
ATGTTTCGTGATGCAAGTAT+TGG 0.589456 tig0035440:+6898 Msa1454790:CDS
AGTTACCGGCGCATAAGGCG+GGG 0.590910 tig0035440:+5044 Msa1454790:CDS
TATATATAACACTATTAGGA+TGG 0.591675 tig0035440:-6810 None:intergenic
TGATTGTAAAGTCAAGGGAA+AGG 0.594051 tig0035440:+7551 Msa1454790:CDS
TTCACATCAACCTCCGGACG+CGG 0.594497 tig0035440:-4962 None:intergenic
TTAGGATTCTGAATGGGCAG+AGG 0.597519 tig0035440:+5074 Msa1454790:CDS
AGGTGCCGGAGCTATGGCGG+AGG 0.598308 tig0035440:+4996 Msa1454790:CDS
TATGCAAGCTAAGACGCGGC+TGG 0.601478 tig0035440:-6159 None:intergenic
GAGGTAGGTGGAGAGTGGAG+AGG 0.602979 tig0035440:-4790 None:intergenic
GCATACTGGTACATGTATGG+AGG 0.605806 tig0035440:+7435 Msa1454790:CDS
GAAGGAGTTGAGTGAGGTGC+CGG 0.609700 tig0035440:+4982 Msa1454790:CDS
AAGAAAGAATAGAAGCATTG+AGG 0.611980 tig0035440:+6347 Msa1454790:CDS
CATTTCTCTAAATATCTCCA+AGG 0.612521 tig0035440:-6566 None:intergenic
GTTGAAACAGGAAGAAGAAG+TGG 0.613773 tig0035440:-4692 None:intergenic
AAGATTAAGGGAAGTCGTGA+GGG 0.613821 tig0035440:+7489 Msa1454790:CDS
TTGGGCTTAAGTAACTTCCA+CGG 0.614679 tig0035440:+7887 Msa1454790:three_prime_UTR
GGAGTTACCGGCGCATAAGG+CGG 0.615516 tig0035440:+5042 Msa1454790:CDS
AAATATCGTTGTTGTCAGGA+AGG 0.616522 tig0035440:-4895 None:intergenic
CAACGCAGTTGAGGGGAAAG+CGG 0.616959 tig0035440:-4841 None:intergenic
AATACATCCAGAGTTTGAGA+AGG 0.618189 tig0035440:+7055 Msa1454790:CDS
TATACAAATGGATGATGCAA+CGG 0.619265 tig0035440:+5906 Msa1454790:CDS
GTACACAAAAGCCTGTGATG+GGG 0.621853 tig0035440:-6503 None:intergenic
CACCCAATTGAATCATTCGG+TGG 0.622335 tig0035440:-6132 None:intergenic
GAAGATTAAGGGAAGTCGTG+AGG 0.622880 tig0035440:+7488 Msa1454790:CDS
TATTAGGATGGCATTTCTCG+AGG 0.625254 tig0035440:-6798 None:intergenic
GCGTTGGCAACGTCGAACAA+TGG 0.625359 tig0035440:+4858 Msa1454790:CDS
GCTTATAAGAGCTTTGAAGA+GGG 0.626136 tig0035440:-6185 None:intergenic
AGGCAAGAGATGCTACGCGC+TGG 0.626231 tig0035440:+6367 Msa1454790:CDS
CATACTGGTACATGTATGGA+GGG 0.627303 tig0035440:+7436 Msa1454790:CDS
TAATATCATCAAATACCTCA+CGG 0.632598 tig0035440:-6006 None:intergenic
TAGGCATACCAACCTTAGAG+TGG 0.638621 tig0035440:-6537 None:intergenic
ACGTTGCCAACGCAGTTGAG+GGG 0.639242 tig0035440:-4848 None:intergenic
TGATGTGAAGGAGTTGAGTG+AGG 0.642505 tig0035440:+4976 Msa1454790:CDS
CGCAGTTGAGGGGAAAGCGG+CGG 0.643012 tig0035440:-4838 None:intergenic
AGATGTAAGAGATTTCACTA+AGG 0.650087 tig0035440:+7650 Msa1454790:CDS
TACCAGTATGCAAGAACACA+AGG 0.651343 tig0035440:-7423 None:intergenic
AAGATTGCGGAAAAGTGTGA+AGG 0.663910 tig0035440:-4765 None:intergenic
CACAATCAATATATGGAACG+TGG 0.669238 tig0035440:-6056 None:intergenic
AGGTAGAACGCATTGAAGAG+AGG 0.675671 tig0035440:-4745 None:intergenic
CATCCTACTTCTAAGCCAAG+TGG 0.677886 tig0035440:+7276 Msa1454790:CDS
TGATGATCATAGTTGGACTG+AGG 0.691050 tig0035440:+7767 Msa1454790:three_prime_UTR
AGGAGGCTGAAGAAAACAAG+CGG 0.696169 tig0035440:+4936 Msa1454790:CDS
GTGCATAAAGATATTTATGG+TGG 0.703198 tig0035440:+6286 Msa1454790:CDS
GAATTATGCAAGCTAAGACG+CGG 0.705558 tig0035440:-6163 None:intergenic
ACTAGGCTAGCAGATTACAT+GGG 0.706145 tig0035440:+5959 Msa1454790:CDS
CAAGTTTACAAAGTGCCGTG+AGG 0.713955 tig0035440:+5991 Msa1454790:CDS
TGGTATTGATGAAAACCAAG+AGG 0.717050 tig0035440:+6387 Msa1454790:CDS
GAGGGCATCGAAATTCATCG+GGG 0.720882 tig0035440:+7454 Msa1454790:CDS
ATTGTTGTTGATACATAACA+TGG 0.723106 tig0035440:+4658 None:intergenic
AAGCTCTTATAAGCGAACCA+GGG 0.725063 tig0035440:+6194 Msa1454790:CDS
ATACTGACTGACCCTAAACG+CGG 0.751990 tig0035440:-5164 None:intergenic
AGGGCATCGAAATTCATCGG+GGG 0.752383 tig0035440:+7455 Msa1454790:CDS
GAAAGTTGGTAAAATTGACA+AGG 0.752517 tig0035440:+6855 Msa1454790:CDS
ACACAAAAGCCTGTGATGGG+GGG 0.758936 tig0035440:-6501 None:intergenic

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! AAAAAAACTAAATCTATGTT+TGG - tig0035440:5377-5396 None:intergenic 15.0%
!! TTTAGTAAATAAACATATGA+TGG - tig0035440:6724-6743 None:intergenic 15.0%
!! ATACTATATATAACACTATT+AGG - tig0035440:6817-6836 None:intergenic 15.0%
!! TAGTATATATTTAGATTCTT+TGG + tig0035440:6831-6850 Msa1454790:CDS 15.0%
!!! TCTTCAATTCAATTTGTTTT+AGG + tig0035440:5424-5443 Msa1454790:intron 20.0%
!!! CTTCAATTCAATTTGTTTTA+GGG + tig0035440:5425-5444 Msa1454790:intron 20.0%
!! AATTTCTTTCTTGAATATCT+AGG - tig0035440:5468-5487 None:intergenic 20.0%
!! TAGATATTCAAGAAAGAAAT+TGG + tig0035440:5467-5486 Msa1454790:intron 20.0%
!!! AAGGTTTTAGTTACTAATAT+CGG + tig0035440:5581-5600 Msa1454790:intron 20.0%
!! CTGATTTCATAATAAATTCA+AGG - tig0035440:5710-5729 None:intergenic 20.0%
!! CAGGGAAAATAATTAAATTT+GGG - tig0035440:5878-5897 None:intergenic 20.0%
!!! TTTGATGATATTATCAATCA+AGG + tig0035440:6016-6035 Msa1454790:CDS 20.0%
!! TATATATAACACTATTAGGA+TGG - tig0035440:6813-6832 None:intergenic 20.0%
!!! CATCAATTTCATACTTATTT+TGG - tig0035440:7014-7033 None:intergenic 20.0%
!!! ATTCAAGTTTTTCCATTAAT+GGG - tig0035440:7038-7057 None:intergenic 20.0%
!!! TATTCAAGTTTTTCCATTAA+TGG - tig0035440:7039-7058 None:intergenic 20.0%
!! CAAAATTGAAATGGATAATA+TGG - tig0035440:7191-7210 None:intergenic 20.0%
!!! ATTATCCATTTCAATTTTGA+TGG + tig0035440:7192-7211 Msa1454790:CDS 20.0%
!!! TTGTACTTAATGGTTTTTTT+TGG + tig0035440:7868-7887 Msa1454790:three_prime_UTR 20.0%
!!! TGTACTTAATGGTTTTTTTT+GGG + tig0035440:7869-7888 Msa1454790:three_prime_UTR 20.0%
!! ACTTTCATTTCTCTACATTT+TGG + tig0035440:5201-5220 Msa1454790:intron 25.0%
!!! TACATTTTGGTATGTATGTT+TGG + tig0035440:5214-5233 Msa1454790:intron 25.0%
!!! AGATTTAGTTTTTTTGCTTG+TGG + tig0035440:5382-5401 Msa1454790:intron 25.0%
!!! GATTTAGTTTTTTTGCTTGT+GGG + tig0035440:5383-5402 Msa1454790:intron 25.0%
!! TACCAATTCTGAAAAAAGAA+AGG - tig0035440:5626-5645 None:intergenic 25.0%
!! TACTGATTGGAATTAGTATA+TGG + tig0035440:5780-5799 Msa1454790:intron 25.0%
! GCAGGGAAAATAATTAAATT+TGG - tig0035440:5879-5898 None:intergenic 25.0%
!! TAATTATTTTCCCTGCTTAA+AGG + tig0035440:5883-5902 Msa1454790:intron 25.0%
! TAATATCATCAAATACCTCA+CGG - tig0035440:6009-6028 None:intergenic 25.0%
! TGAGTTTATATATCATCGTT+TGG + tig0035440:6246-6265 Msa1454790:CDS 25.0%
! AAATATCTTTATGCACATCA+AGG - tig0035440:6282-6301 None:intergenic 25.0%
! GATGTGCATAAAGATATTTA+TGG + tig0035440:6283-6302 Msa1454790:CDS 25.0%
! TTCTATTCTTTCTTTGTCTA+TGG - tig0035440:6341-6360 None:intergenic 25.0%
!! ATAAACATATGATGGTGTAA+GGG - tig0035440:6716-6735 None:intergenic 25.0%
!! AATAAACATATGATGGTGTA+AGG - tig0035440:6717-6736 None:intergenic 25.0%
! ACTAAACATGTACTTCAATA+TGG + tig0035440:6738-6757 Msa1454790:CDS 25.0%
! TATGGAATCACATGATAAAT+TGG + tig0035440:6756-6775 Msa1454790:CDS 25.0%
! TTAAGTGATTTCCTGAATAT+AGG - tig0035440:6963-6982 None:intergenic 25.0%
! ATATTCAGGAAATCACTTAA+AGG + tig0035440:6963-6982 Msa1454790:CDS 25.0%
!!! TTCAAGTTTTTCCATTAATG+GGG - tig0035440:7037-7056 None:intergenic 25.0%
!! TCTGTTCTTTATTTAACTTC+AGG - tig0035440:7104-7123 None:intergenic 25.0%
! AATTGCCATCAAAATTGAAA+TGG - tig0035440:7200-7219 None:intergenic 25.0%
! CTTACATCTTCAAGAATATA+TGG - tig0035440:7639-7658 None:intergenic 25.0%
! AATCAGACGAATGAAAAAAA+AGG + tig0035440:7733-7752 Msa1454790:exon 25.0%
!!! TGTTTGACTTTTGTACTTAA+TGG + tig0035440:7858-7877 Msa1454790:three_prime_UTR 25.0%
! AGTGATCAAAATATTCAAGA+AGG - tig0035440:7928-7947 None:intergenic 25.0%
ACTTTGATTAGGATTCTGAA+TGG + tig0035440:5067-5086 Msa1454790:CDS 30.0%
CTTTGATTAGGATTCTGAAT+GGG + tig0035440:5068-5087 Msa1454790:CDS 30.0%
ATATCATTATGCATTGCTTG+CGG + tig0035440:5125-5144 Msa1454790:CDS 30.0%
TGTAGAGAAATGAAAGTGAA+AGG - tig0035440:5198-5217 None:intergenic 30.0%
AAGAACTATAAACCAAGACT+TGG - tig0035440:5522-5541 None:intergenic 30.0%
TTCTTTATGCTACAAAGCTT+AGG + tig0035440:5537-5556 Msa1454790:intron 30.0%
TCTTTATGCTACAAAGCTTA+GGG + tig0035440:5538-5557 Msa1454790:intron 30.0%
!! TAGGGAGGAATTTAAGTTTT+AGG + tig0035440:5556-5575 Msa1454790:intron 30.0%
!! AGGGAGGAATTTAAGTTTTA+GGG + tig0035440:5557-5576 Msa1454790:intron 30.0%
!!! GGAATTTAAGTTTTAGGGAA+AGG + tig0035440:5562-5581 Msa1454790:intron 30.0%
!!! TGCCTTTCTTTTTTCAGAAT+TGG + tig0035440:5621-5640 Msa1454790:intron 30.0%
TACTAATTCCAATCAGTAGA+AGG - tig0035440:5778-5797 None:intergenic 30.0%
CATTTGTATACCTTTAAGCA+GGG - tig0035440:5896-5915 None:intergenic 30.0%
TATACAAATGGATGATGCAA+CGG + tig0035440:5906-5925 Msa1454790:CDS 30.0%
! TTGATTTTGCTCTTTCTACT+AGG + tig0035440:5942-5961 Msa1454790:CDS 30.0%
! ATATAAACTCAGCTTGCTTA+AGG - tig0035440:6237-6256 None:intergenic 30.0%
TATCATCGTTTGGTTACAAA+TGG + tig0035440:6256-6275 Msa1454790:CDS 30.0%
GTGCATAAAGATATTTATGG+TGG + tig0035440:6286-6305 Msa1454790:CDS 30.0%
ATATTTATGGTGGCCTAATT+TGG + tig0035440:6296-6315 Msa1454790:CDS 30.0%
!! AAGAAAGAATAGAAGCATTG+AGG + tig0035440:6347-6366 Msa1454790:CDS 30.0%
CATTTCTCTAAATATCTCCA+AGG - tig0035440:6569-6588 None:intergenic 30.0%
AGAGAAATGAAGTTGAAACT+AGG + tig0035440:6580-6599 Msa1454790:CDS 30.0%
AAGTTGAAACTAGGTAAGAT+AGG + tig0035440:6589-6608 Msa1454790:CDS 30.0%
! CATGATTGATTCTGCAAATT+CGG - tig0035440:6665-6684 None:intergenic 30.0%
! TAAACATATGATGGTGTAAG+GGG - tig0035440:6715-6734 None:intergenic 30.0%
ATCACATGATAAATTGGAAG+AGG + tig0035440:6762-6781 Msa1454790:CDS 30.0%
TTAGATTCTTTGGTGAAAGT+TGG + tig0035440:6841-6860 Msa1454790:CDS 30.0%
!! GAAAGTTGGTAAAATTGACA+AGG + tig0035440:6855-6874 Msa1454790:CDS 30.0%
TAAGATGATGTTACATGATC+GGG - tig0035440:6932-6951 None:intergenic 30.0%
GTAAGATGATGTTACATGAT+CGG - tig0035440:6933-6952 None:intergenic 30.0%
TCATGTAACATCATCTTACA+TGG + tig0035440:6934-6953 Msa1454790:CDS 30.0%
TTACATGGATACCTATATTC+AGG + tig0035440:6949-6968 Msa1454790:CDS 30.0%
! TAATTTTCCTTCTCAAACTC+TGG - tig0035440:7065-7084 None:intergenic 30.0%
! TTATTTAACTTCAGGCTCAT+TGG - tig0035440:7096-7115 None:intergenic 30.0%
! AACAGAGAGAAATACTGATT+GGG + tig0035440:7118-7137 Msa1454790:CDS 30.0%
!!! TGAACAAGTTTTGGAATTGT+AGG - tig0035440:7390-7409 None:intergenic 30.0%
! CAATTCCAAAACTTGTTCAT+AGG + tig0035440:7391-7410 Msa1454790:CDS 30.0%
! GATGTTTTGCTGAAGATTAA+GGG + tig0035440:7477-7496 Msa1454790:CDS 30.0%
! TCCATTGATTGTAAAGTCAA+GGG + tig0035440:7546-7565 Msa1454790:CDS 30.0%
AGATGTAAGAGATTTCACTA+AGG + tig0035440:7650-7669 Msa1454790:CDS 30.0%
! ATTTTTGCTTAGTAGTATGC+CGG + tig0035440:7793-7812 Msa1454790:three_prime_UTR 30.0%
GTTATGACTGAAGTTGAAAC+AGG - tig0035440:4707-4726 None:intergenic 35.0%
AAATATCGTTGTTGTCAGGA+AGG - tig0035440:4898-4917 None:intergenic 35.0%
!!! CTCACCTCTAGAATCAATTT+TGG + tig0035440:5329-5348 Msa1454790:intron 35.0%
!!! CTCTAGAATCAATTTTGGCT+CGG + tig0035440:5334-5353 Msa1454790:intron 35.0%
! TTTTGCTTGTGGGAATTGAT+TGG + tig0035440:5393-5412 Msa1454790:intron 35.0%
CTGATGTAAGACTAGCAATA+AGG - tig0035440:5657-5676 None:intergenic 35.0%
ATGTGTTTCCTTCTACTGAT+TGG + tig0035440:5767-5786 Msa1454790:intron 35.0%
TGGGAACAAATTACAGCTTA+AGG - tig0035440:5859-5878 None:intergenic 35.0%
CCATTTGTATACCTTTAAGC+AGG - tig0035440:5897-5916 None:intergenic 35.0%
! CCTGCTTAAAGGTATACAAA+TGG + tig0035440:5894-5913 Msa1454790:intron 35.0%
CACAATCAATATATGGAACG+TGG - tig0035440:6059-6078 None:intergenic 35.0%
! CACGTTCCATATATTGATTG+TGG + tig0035440:6057-6076 Msa1454790:CDS 35.0%
GGTAAGCCACAATCAATATA+TGG - tig0035440:6066-6085 None:intergenic 35.0%
! TACCTTAGTTCTTCTGTTCA+AGG + tig0035440:6082-6101 Msa1454790:CDS 35.0%
AACCTTGAACAGAAGAACTA+AGG - tig0035440:6087-6106 None:intergenic 35.0%
TTCTTCTGTTCAAGGTTGTT+TGG + tig0035440:6090-6109 Msa1454790:CDS 35.0%
ATTCCACCGAATGATTCAAT+TGG + tig0035440:6129-6148 Msa1454790:CDS 35.0%
TTCCACCGAATGATTCAATT+GGG + tig0035440:6130-6149 Msa1454790:CDS 35.0%
ATCCACCCAATTGAATCATT+CGG - tig0035440:6138-6157 None:intergenic 35.0%
!! GCTTATAAGAGCTTTGAAGA+GGG - tig0035440:6188-6207 None:intergenic 35.0%
!! TGGTATTGATGAAAACCAAG+AGG + tig0035440:6387-6406 Msa1454790:CDS 35.0%
GCTTTCAAACTGCAAAAGTT+TGG - tig0035440:6479-6498 None:intergenic 35.0%
! ACAGGCTTTTGTGTACAAAA+TGG + tig0035440:6510-6529 Msa1454790:CDS 35.0%
AATATCTCCAAGGACTTCAT+AGG - tig0035440:6559-6578 None:intergenic 35.0%
! ATGACAGATTTTGTCAAGAG+TGG + tig0035440:6682-6701 Msa1454790:CDS 35.0%
TACTTGCATCACGAAACATT+TGG - tig0035440:6897-6916 None:intergenic 35.0%
ATGTTTCGTGATGCAAGTAT+TGG + tig0035440:6898-6917 Msa1454790:CDS 35.0%
TGAAATTGATGCCCCATTAA+TGG + tig0035440:7023-7042 Msa1454790:CDS 35.0%
AATACATCCAGAGTTTGAGA+AGG + tig0035440:7055-7074 Msa1454790:CDS 35.0%
GAACAGAGAGAAATACTGAT+TGG + tig0035440:7117-7136 Msa1454790:CDS 35.0%
! GCTTTTATGCCAATCAGTTT+TGG + tig0035440:7352-7371 Msa1454790:CDS 35.0%
! TTCCAAAACTTGTTCATAGG+TGG + tig0035440:7394-7413 Msa1454790:CDS 35.0%
! AACCACCTATGAACAAGTTT+TGG - tig0035440:7399-7418 None:intergenic 35.0%
! GGATGTTTTGCTGAAGATTA+AGG + tig0035440:7476-7495 Msa1454790:CDS 35.0%
GACTTTACAATCAATGGACA+TGG - tig0035440:7544-7563 None:intergenic 35.0%
! GTCCATTGATTGTAAAGTCA+AGG + tig0035440:7545-7564 Msa1454790:CDS 35.0%
TCCCTTGACTTTACAATCAA+TGG - tig0035440:7550-7569 None:intergenic 35.0%
TGATTGTAAAGTCAAGGGAA+AGG + tig0035440:7551-7570 Msa1454790:CDS 35.0%
GATTGTAAAGTCAAGGGAAA+GGG + tig0035440:7552-7571 Msa1454790:CDS 35.0%
!! GTATTCTGGATTGGTATTCT+GGG + tig0035440:7579-7598 Msa1454790:CDS 35.0%
!! TACAACTTGGTTCTGGAAAT+TGG + tig0035440:7608-7627 Msa1454790:CDS 35.0%
AGGTGTGAATATAATGAGAC+AGG + tig0035440:7674-7693 Msa1454790:CDS 35.0%
ACTGCAATGATGATCATAGT+TGG + tig0035440:7760-7779 Msa1454790:three_prime_UTR 35.0%
! TGTAAAAGCATAACCTAGTC+CGG - tig0035440:7815-7834 None:intergenic 35.0%
! ACTAGGTTATGCTTTTACAC+TGG + tig0035440:7816-7835 Msa1454790:three_prime_UTR 35.0%
GTTGAAACAGGAAGAAGAAG+TGG - tig0035440:4695-4714 None:intergenic 40.0%
TGAAGAGAGGTTAGGGTTTA+AGG - tig0035440:4735-4754 None:intergenic 40.0%
AACGCATTGAAGAGAGGTTA+GGG - tig0035440:4742-4761 None:intergenic 40.0%
! AAGATTGCGGAAAAGTGTGA+AGG - tig0035440:4768-4787 None:intergenic 40.0%
CGGAAAATATCGTTGTTGTC+AGG - tig0035440:4902-4921 None:intergenic 40.0%
! AACGATATTTTCCGTTTCGC+AGG + tig0035440:4908-4927 Msa1454790:CDS 40.0%
! ACGATATTTTCCGTTTCGCA+GGG + tig0035440:4909-4928 Msa1454790:CDS 40.0%
!! TTGGCTTTGTAAGGAGTTAC+CGG + tig0035440:5030-5049 Msa1454790:CDS 40.0%
! CTAGAGGTGAGACTTGATTT+TGG - tig0035440:5320-5339 None:intergenic 40.0%
! CGAGCCAAAATTGATTCTAG+AGG - tig0035440:5336-5355 None:intergenic 40.0%
! TCTATGTTTGGTTCCACCTT+TGG - tig0035440:5365-5384 None:intergenic 40.0%
TTATGCTACAAAGCTTAGGG+AGG + tig0035440:5541-5560 Msa1454790:intron 40.0%
TAATCAACTAATACCCGACC+AGG - tig0035440:5745-5764 None:intergenic 40.0%
TACTAGGCTAGCAGATTACA+TGG + tig0035440:5958-5977 Msa1454790:CDS 40.0%
ACTAGGCTAGCAGATTACAT+GGG + tig0035440:5959-5978 Msa1454790:CDS 40.0%
GAATTATGCAAGCTAAGACG+CGG - tig0035440:6166-6185 None:intergenic 40.0%
!! CGCTTATAAGAGCTTTGAAG+AGG - tig0035440:6189-6208 None:intergenic 40.0%
AAAGCTCTTATAAGCGAACC+AGG + tig0035440:6193-6212 Msa1454790:CDS 40.0%
AAGCTCTTATAAGCGAACCA+GGG + tig0035440:6194-6213 Msa1454790:CDS 40.0%
!! TACTGCTTTGAAAAGTTCCC+TGG - tig0035440:6214-6233 None:intergenic 40.0%
GATAGCTATGCAGCCAAATT+AGG - tig0035440:6312-6331 None:intergenic 40.0%
AATTTGGCTGCATAGCTATC+AGG + tig0035440:6312-6331 Msa1454790:CDS 40.0%
TGTACACAAAAGCCTGTGAT+GGG - tig0035440:6507-6526 None:intergenic 40.0%
TTGTACACAAAAGCCTGTGA+TGG - tig0035440:6508-6527 None:intergenic 40.0%
CAAAATGGAAGTCCACTCTA+AGG + tig0035440:6525-6544 Msa1454790:CDS 40.0%
TATTAGGATGGCATTTCTCG+AGG - tig0035440:6801-6820 None:intergenic 40.0%
! GTTGGTAAAATTGACAAGGC+TGG + tig0035440:6859-6878 Msa1454790:CDS 40.0%
!! TACATCGCCAGTTTTATGAG+TGG + tig0035440:7250-7269 Msa1454790:CDS 40.0%
GATGTAGCCACTCATAAAAC+TGG - tig0035440:7260-7279 None:intergenic 40.0%
GCAATGGTGCAAAACTTATC+TGG - tig0035440:7318-7337 None:intergenic 40.0%
! ACCATTGCAAGCTCTCATTT+TGG + tig0035440:7330-7349 Msa1454790:CDS 40.0%
ACCATTTGGCCAAAACTGAT+TGG - tig0035440:7364-7383 None:intergenic 40.0%
! GGAATTGTAGGTTGACCATT+TGG - tig0035440:7378-7397 None:intergenic 40.0%
TACCAGTATGCAAGAACACA+AGG - tig0035440:7426-7445 None:intergenic 40.0%
CTTGCATACTGGTACATGTA+TGG + tig0035440:7432-7451 Msa1454790:CDS 40.0%
CATACTGGTACATGTATGGA+GGG + tig0035440:7436-7455 Msa1454790:CDS 40.0%
AAGATTAAGGGAAGTCGTGA+GGG + tig0035440:7489-7508 Msa1454790:CDS 40.0%
TAAAGTCAAGGGAAAGGGAA+AGG + tig0035440:7557-7576 Msa1454790:CDS 40.0%
!! AAGGGAAAGGTATTCTGGAT+TGG + tig0035440:7570-7589 Msa1454790:CDS 40.0%
!! GGTATTCTGGATTGGTATTC+TGG + tig0035440:7578-7597 Msa1454790:CDS 40.0%
! TTCTGGGAAGCAATACAACT+TGG + tig0035440:7595-7614 Msa1454790:CDS 40.0%
GAAGCAATACAACTTGGTTC+TGG + tig0035440:7601-7620 Msa1454790:CDS 40.0%
GTAAGAGATTTCACTAAGGC+AGG + tig0035440:7654-7673 Msa1454790:CDS 40.0%
TGATGATCATAGTTGGACTG+AGG + tig0035440:7767-7786 Msa1454790:three_prime_UTR 40.0%
! AGGTTATGCTTTTACACTGG+TGG + tig0035440:7819-7838 Msa1454790:three_prime_UTR 40.0%
TTGGGCTTAAGTAACTTCCA+CGG + tig0035440:7887-7906 Msa1454790:three_prime_UTR 40.0%
!! GGCTTTCATTTTTACAACCG+TGG - tig0035440:7907-7926 None:intergenic 40.0%
GAACGCATTGAAGAGAGGTT+AGG - tig0035440:4743-4762 None:intergenic 45.0%
AGGTAGAACGCATTGAAGAG+AGG - tig0035440:4748-4767 None:intergenic 45.0%
TGTTGTCAGGAAGGTCTTGA+TGG - tig0035440:4889-4908 None:intergenic 45.0%
! CGATATTTTCCGTTTCGCAG+GGG + tig0035440:4910-4929 Msa1454790:CDS 45.0%
AGGAGGCTGAAGAAAACAAG+CGG + tig0035440:4936-4955 Msa1454790:CDS 45.0%
AACTCCTTCACATCAACCTC+CGG - tig0035440:4971-4990 None:intergenic 45.0%
TGATGTGAAGGAGTTGAGTG+AGG + tig0035440:4976-4995 Msa1454790:CDS 45.0%
CTTACAAAGCCAAGCAACTC+TGG - tig0035440:5023-5042 None:intergenic 45.0%
!! CAGAGTTGCTTGGCTTTGTA+AGG + tig0035440:5021-5040 Msa1454790:CDS 45.0%
ATAAGGCGGGGACTTTGATT+AGG + tig0035440:5056-5075 Msa1454790:CDS 45.0%
TTAGGATTCTGAATGGGCAG+AGG + tig0035440:5074-5093 Msa1454790:CDS 45.0%
! ATACTGACTGACCCTAAACG+CGG - tig0035440:5167-5186 None:intergenic 45.0%
! ATGTTTGGTTCCACCTTTGG+AGG - tig0035440:5362-5381 None:intergenic 45.0%
! CAAGACTTGGTTTCAACAGC+TGG - tig0035440:5509-5528 None:intergenic 45.0%
CAGCTGTTGAAACCAAGTCT+TGG + tig0035440:5507-5526 Msa1454790:intron 45.0%
! AATCAGTCTTTTGTCCCTCC+TGG + tig0035440:5724-5743 Msa1454790:intron 45.0%
AATGGATGATGCAACGGAGT+TGG + tig0035440:5912-5931 Msa1454790:CDS 45.0%
!! TGATGCAACGGAGTTGGTAT+CGG + tig0035440:5918-5937 Msa1454790:CDS 45.0%
!! CAAGTTTACAAAGTGCCGTG+AGG + tig0035440:5991-6010 Msa1454790:CDS 45.0%
CACCCAATTGAATCATTCGG+TGG - tig0035440:6135-6154 None:intergenic 45.0%
CACCGAATGATTCAATTGGG+TGG + tig0035440:6133-6152 Msa1454790:CDS 45.0%
AGATCGATACTAGCACCTCT+TGG - tig0035440:6405-6424 None:intergenic 45.0%
!! AGGTGCTAGTATCGATCTTG+AGG + tig0035440:6407-6426 Msa1454790:CDS 45.0%
!! GGTGCTAGTATCGATCTTGA+GGG + tig0035440:6408-6427 Msa1454790:CDS 45.0%
TGGAGGAAGCAGAGAAAACT+TGG + tig0035440:6452-6471 Msa1454790:CDS 45.0%
TACACAAAAGCCTGTGATGG+GGG - tig0035440:6505-6524 None:intergenic 45.0%
GTACACAAAAGCCTGTGATG+GGG - tig0035440:6506-6525 None:intergenic 45.0%
!! ATGGAAGTCCACTCTAAGGT+TGG + tig0035440:6529-6548 Msa1454790:CDS 45.0%
TAGGCATACCAACCTTAGAG+TGG - tig0035440:6540-6559 None:intergenic 45.0%
TGGTATGCCTATGAAGTCCT+TGG + tig0035440:6549-6568 Msa1454790:CDS 45.0%
CATCCTACTTCTAAGCCAAG+TGG + tig0035440:7276-7295 Msa1454790:CDS 45.0%
TCACCACTTGGCTTAGAAGT+AGG - tig0035440:7282-7301 None:intergenic 45.0%
ATGTTCTCACTGTCACCACT+TGG - tig0035440:7294-7313 None:intergenic 45.0%
GCCAAAATGAGAGCTTGCAA+TGG - tig0035440:7334-7353 None:intergenic 45.0%
!! GCCAATCAGTTTTGGCCAAA+TGG + tig0035440:7360-7379 Msa1454790:CDS 45.0%
CACCTTGTGTTCTTGCATAC+TGG + tig0035440:7421-7440 Msa1454790:CDS 45.0%
GCATACTGGTACATGTATGG+AGG + tig0035440:7435-7454 Msa1454790:CDS 45.0%
!! TGGAGGGCATCGAAATTCAT+CGG + tig0035440:7452-7471 Msa1454790:CDS 45.0%
GAAGATTAAGGGAAGTCGTG+AGG + tig0035440:7488-7507 Msa1454790:CDS 45.0%
!! AGGGAAAGGGAAAGGTATTC+TGG + tig0035440:7565-7584 Msa1454790:CDS 45.0%
GAGTGGAGAGGGTAAGATTG+CGG - tig0035440:4781-4800 None:intergenic 50.0%
! TATTTTCCGTTTCGCAGGGG+TGG + tig0035440:4913-4932 Msa1454790:CDS 50.0%
TAAGGAGTTACCGGCGCATA+AGG + tig0035440:5039-5058 Msa1454790:CDS 50.0%
TTCTGAATGGGCAGAGGAAG+TGG + tig0035440:5080-5099 Msa1454790:CDS 50.0%
CGAGAACGAAACCGCGTTTA+GGG + tig0035440:5153-5172 Msa1454790:CDS 50.0%
! AGTCTTTTGTCCCTCCTGGT+CGG + tig0035440:5728-5747 Msa1454790:intron 50.0%
CAACTAATACCCGACCAGGA+GGG - tig0035440:5741-5760 None:intergenic 50.0%
TCAACTAATACCCGACCAGG+AGG - tig0035440:5742-5761 None:intergenic 50.0%
ATATGGAACGTGGACTCGCT+GGG - tig0035440:6049-6068 None:intergenic 50.0%
TATATGGAACGTGGACTCGC+TGG - tig0035440:6050-6069 None:intergenic 50.0%
! ACACAAAAGCCTGTGATGGG+GGG - tig0035440:6504-6523 None:intergenic 50.0%
CTGATTGGGATGCTTCTAGC+TGG + tig0035440:7132-7151 Msa1454790:CDS 50.0%
!! GGAGGGCATCGAAATTCATC+GGG + tig0035440:7453-7472 Msa1454790:CDS 50.0%
!! GAGGGCATCGAAATTCATCG+GGG + tig0035440:7454-7473 Msa1454790:CDS 50.0%
!! AGGGCATCGAAATTCATCGG+GGG + tig0035440:7455-7474 Msa1454790:CDS 50.0%
GCTTAGTAGTATGCCGGACT+AGG + tig0035440:7799-7818 Msa1454790:three_prime_UTR 50.0%
AGGTAGGTGGAGAGTGGAGA+GGG - tig0035440:4792-4811 None:intergenic 55.0%
CAACGCAGTTGAGGGGAAAG+CGG - tig0035440:4844-4863 None:intergenic 55.0%
ACGTTGCCAACGCAGTTGAG+GGG - tig0035440:4851-4870 None:intergenic 55.0%
GACGTTGCCAACGCAGTTGA+GGG - tig0035440:4852-4871 None:intergenic 55.0%
! GCGTTGGCAACGTCGAACAA+TGG + tig0035440:4858-4877 Msa1454790:CDS 55.0%
TTCACATCAACCTCCGGACG+CGG - tig0035440:4965-4984 None:intergenic 55.0%
GAAGGAGTTGAGTGAGGTGC+CGG + tig0035440:4982-5001 Msa1454790:CDS 55.0%
ATGGGCAGAGGAAGTGGTTG+AGG + tig0035440:5086-5105 Msa1454790:CDS 55.0%
GCGAGAACGAAACCGCGTTT+AGG + tig0035440:5152-5171 Msa1454790:CDS 55.0%
!!! TTTTGGCTCGGCTCCTCCAA+AGG + tig0035440:5346-5365 Msa1454790:intron 55.0%
! GTCTTTTGTCCCTCCTGGTC+GGG + tig0035440:5729-5748 Msa1454790:intron 55.0%
TATGCAAGCTAAGACGCGGC+TGG - tig0035440:6162-6181 None:intergenic 55.0%
TGAAAGCAACCCCCCATCAC+AGG + tig0035440:6492-6511 Msa1454790:CDS 55.0%
TAAGGGAAGTCGTGAGGGTG+TGG + tig0035440:7494-7513 Msa1454790:CDS 55.0%
GAGGTAGGTGGAGAGTGGAG+AGG - tig0035440:4793-4812 None:intergenic 60.0%
CGCTTTCCCCTCAACTGCGT+TGG + tig0035440:4842-4861 Msa1454790:CDS 60.0%
CGACGTTGCCAACGCAGTTG+AGG - tig0035440:4853-4872 None:intergenic 60.0%
TTTCCGTTTCGCAGGGGTGG+AGG + tig0035440:4916-4935 Msa1454790:CDS 60.0%
!! GCGTCCGGAGGTTGATGTGA+AGG + tig0035440:4964-4983 Msa1454790:CDS 60.0%
!! TGAGTGAGGTGCCGGAGCTA+TGG + tig0035440:4990-5009 Msa1454790:CDS 60.0%
GGAGTTACCGGCGCATAAGG+CGG + tig0035440:5042-5061 Msa1454790:CDS 60.0%
GAGTTACCGGCGCATAAGGC+GGG + tig0035440:5043-5062 Msa1454790:CDS 60.0%
AGTTACCGGCGCATAAGGCG+GGG + tig0035440:5044-5063 Msa1454790:CDS 60.0%
AAAGTCCCCGCCTTATGCGC+CGG - tig0035440:5052-5071 None:intergenic 60.0%
GCAGAGGAAGTGGTTGAGGC+AGG + tig0035440:5090-5109 Msa1454790:CDS 60.0%
ACGTGGACTCGCTGGGAACA+CGG - tig0035440:6042-6061 None:intergenic 60.0%
AGGCAAGAGATGCTACGCGC+TGG + tig0035440:6367-6386 Msa1454790:CDS 60.0%
GATCTTGAGGGCCTGCGCAA+GGG + tig0035440:6420-6439 Msa1454790:CDS 60.0%
GGTGCGAGGTAGGTGGAGAG+TGG - tig0035440:4798-4817 None:intergenic 65.0%
! AAGGGAGGGTGCGAGGTAGG+TGG - tig0035440:4805-4824 None:intergenic 65.0%
GAGGTGGAGGAGGGAAGGGA+GGG - tig0035440:4819-4838 None:intergenic 65.0%
AAAGCGGCGGAGGTGGAGGA+GGG - tig0035440:4828-4847 None:intergenic 65.0%
AGTTGAGGGGAAAGCGGCGG+AGG - tig0035440:4838-4857 None:intergenic 65.0%
CGCAGTTGAGGGGAAAGCGG+CGG - tig0035440:4841-4860 None:intergenic 65.0%
CCTCCTCCACCCCTGCGAAA+CGG - tig0035440:4922-4941 None:intergenic 65.0%
AAACAAGCGGCTGCCGCGTC+CGG + tig0035440:4949-4968 Msa1454790:CDS 65.0%
!! GTGAGGTGCCGGAGCTATGG+CGG + tig0035440:4993-5012 Msa1454790:CDS 65.0%
CTGGACCTCCGCCATAGCTC+CGG - tig0035440:5004-5023 None:intergenic 65.0%
GGCGGAGGTCCAGAGTTGCT+TGG + tig0035440:5011-5030 Msa1454790:CDS 65.0%
! TGGCTCGGCTCCTCCAAAGG+TGG + tig0035440:5349-5368 Msa1454790:intron 65.0%
CGATCTTGAGGGCCTGCGCA+AGG + tig0035440:6419-6438 Msa1454790:CDS 65.0%
TTGAGGGCCTGCGCAAGGGA+GGG + tig0035440:6424-6443 Msa1454790:CDS 65.0%
! GGGAAGGGAGGGTGCGAGGT+AGG - tig0035440:4808-4827 None:intergenic 70.0%
! AGGAGGGAAGGGAGGGTGCG+AGG - tig0035440:4812-4831 None:intergenic 70.0%
GGAGGTGGAGGAGGGAAGGG+AGG - tig0035440:4820-4839 None:intergenic 70.0%
GGCGGAGGTGGAGGAGGGAA+GGG - tig0035440:4823-4842 None:intergenic 70.0%
GAAAGCGGCGGAGGTGGAGG+AGG - tig0035440:4829-4848 None:intergenic 70.0%
TGAGGGGAAAGCGGCGGAGG+TGG - tig0035440:4835-4854 None:intergenic 70.0%
CCGTTTCGCAGGGGTGGAGG+AGG + tig0035440:4919-4938 Msa1454790:CDS 70.0%
!! AGGTGCCGGAGCTATGGCGG+AGG + tig0035440:4996-5015 Msa1454790:CDS 70.0%
CTTGAGGGCCTGCGCAAGGG+AGG + tig0035440:6423-6442 Msa1454790:CDS 70.0%
CACCTCACCCTCCCTTGCGC+AGG - tig0035440:6434-6453 None:intergenic 70.0%
CTGCGCAAGGGAGGGTGAGG+TGG + tig0035440:6432-6451 Msa1454790:CDS 70.0%
CGCAAGGGAGGGTGAGGTGG+AGG + tig0035440:6435-6454 Msa1454790:CDS 70.0%
CGGCGGAGGTGGAGGAGGGA+AGG - tig0035440:4824-4843 None:intergenic 75.0%
GGGGAAAGCGGCGGAGGTGG+AGG - tig0035440:4832-4851 None:intergenic 75.0%
GGCCTGCGCAAGGGAGGGTG+AGG + tig0035440:6429-6448 Msa1454790:CDS 75.0%
! CAAGCGGCTGCCGCGTCCGG+AGG + tig0035440:4952-4971 Msa1454790:CDS 80.0%
Chromosome Type Strat End Strand Name
tig0035440 gene 4669 7947 4669 ID=Msa1454790;Name=Msa1454790
tig0035440 mRNA 4669 7947 4669 ID=Msa1454790-mRNA-1;Parent=Msa1454790;Name=Msa1454790-mRNA-1;_AED=0.00;_eAED=0.00;_QI=8|1|1|1|1|1|2|201|779
tig0035440 exon 4669 5174 4669 ID=Msa1454790-mRNA-1:exon:19936;Parent=Msa1454790-mRNA-1
tig0035440 exon 5905 7947 5905 ID=Msa1454790-mRNA-1:exon:19937;Parent=Msa1454790-mRNA-1
tig0035440 five_prime_UTR 4669 4676 4669 ID=Msa1454790-mRNA-1:five_prime_utr;Parent=Msa1454790-mRNA-1
tig0035440 CDS 4677 5174 4677 ID=Msa1454790-mRNA-1:cds;Parent=Msa1454790-mRNA-1
tig0035440 CDS 5905 7746 5905 ID=Msa1454790-mRNA-1:cds;Parent=Msa1454790-mRNA-1
tig0035440 three_prime_UTR 7747 7947 7747 ID=Msa1454790-mRNA-1:three_prime_utr;Parent=Msa1454790-mRNA-1
Gene Sequence

>Msa1454790

ATGGTGTTGAAAGCACCACTTCTTCTTCCTGTTTCAACTTCAGTCATAACATTTTCCTTAAACCCTAACCTCTCTTCAATGCGTTCTACCTTCACACTTTTCCGCAATCTTACCCTCTCCACTCTCCACCTACCTCGCACCCTCCCTTCCCTCCTCCACCTCCGCCGCTTTCCCCTCAACTGCGTTGGCAACGTCGAACAATGGCTTCTCCATCAAGACCTTCCTGACAACAACGATATTTTCCGTTTCGCAGGGGTGGAGGAGGCTGAAGAAAACAAGCGGCTGCCGCGTCCGGAGGTTGATGTGAAGGAGTTGAGTGAGGTGCCGGAGCTATGGCGGAGGTCCAGAGTTGCTTGGCTTTGTAAGGAGTTACCGGCGCATAAGGCGGGGACTTTGATTAGGATTCTGAATGGGCAGAGGAAGTGGTTGAGGCAGGATGATGCTACTTATATCATTATGCATTGCTTGCGGATTCGCGAGAACGAAACCGCGTTTAGGGTATACAAATGGATGATGCAACGGAGTTGGTATCGGTTTGATTTTGCTCTTTCTACTAGGCTAGCAGATTACATGGGTAAAGAGCGCAAGTTTACAAAGTGCCGTGAGGTATTTGATGATATTATCAATCAAGGCCGTGTTCCCAGCGAGTCCACGTTCCATATATTGATTGTGGCTTACCTTAGTTCTTCTGTTCAAGGTTGTTTGGATGATGCATTTGACATATTCCACCGAATGATTCAATTGGGTGGATACCAGCCGCGTCTTAGCTTGCATAATTCCCTCTTCAAAGCTCTTATAAGCGAACCAGGGAACTTTTCAAAGCAGTACCTTAAGCAAGCTGAGTTTATATATCATCGTTTGGTTACAAATGGCCTTGATGTGCATAAAGATATTTATGGTGGCCTAATTTGGCTGCATAGCTATCAGGATTCCATAGACAAAGAAAGAATAGAAGCATTGAGGCAAGAGATGCTACGCGCTGGTATTGATGAAAACCAAGAGGTGCTAGTATCGATCTTGAGGGCCTGCGCAAGGGAGGGTGAGGTGGAGGAAGCAGAGAAAACTTGGTCCAAACTTTTGCAGTTTGAAAGCAACCCCCCATCACAGGCTTTTGTGTACAAAATGGAAGTCCACTCTAAGGTTGGTATGCCTATGAAGTCCTTGGAGATATTTAGAGAAATGAAGTTGAAACTAGGTAAGATAGGTGTTGCAGCATATAATAAAATAATTGAGATTCTATGCAAAGCACAAGAATCCGAATTTGCAGAATCAATCATGACAGATTTTGTCAAGAGTGGTCTGAAGCCCCTTACACCATCATATGTTTATTTACTAAACATGTACTTCAATATGGAATCACATGATAAATTGGAAGAGGCGTTCTCTCAATGCCTCGAGAAATGCCATCCTAATAGTGTTATATATAGTATATATTTAGATTCTTTGGTGAAAGTTGGTAAAATTGACAAGGCTGGAGATATCTTTAGCCAAATGTTTCGTGATGCAAGTATTGGTGTTAATGCCCGATCATGTAACATCATCTTACATGGATACCTATATTCAGGAAATCACTTAAAGGCAGAGAAGATCTATGACTTAATGTGCCAAAATAAGTATGAAATTGATGCCCCATTAATGGAAAAACTTGAATACATCCAGAGTTTGAGAAGGAAAATTATTAAAAAGCCAATGAGCCTGAAGTTAAATAAAGAACAGAGAGAAATACTGATTGGGATGCTTCTAGCTGGTTTGCAAATTGATTCTGATGACAAAAATAAGAACCATATTATCCATTTCAATTTTGATGGCAATTCTGTGAGTCATTACGTCTTGAAGAGTCATATACATCGCCAGTTTTATGAGTGGCTACATCCTACTTCTAAGCCAAGTGGTGACAGTGAGAACATACCAGATAAGTTTTGCACCATTGCAAGCTCTCATTTTGGCTTTTATGCCAATCAGTTTTGGCCAAATGGTCAACCTACAATTCCAAAACTTGTTCATAGGTGGTTGTCACCTTGTGTTCTTGCATACTGGTACATGTATGGAGGGCATCGAAATTCATCGGGGGATGTTTTGCTGAAGATTAAGGGAAGTCGTGAGGGTGTGGAGAACATTGTCAAAAAGTTCAAAGCCATGTCCATTGATTGTAAAGTCAAGGGAAAGGGAAAGGTATTCTGGATTGGTATTCTGGGAAGCAATACAACTTGGTTCTGGAAATTGGTTGAGCCATATATTCTTGAAGATGTAAGAGATTTCACTAAGGCAGGTGTGAATATAATGAGACAGGATTTAACAGAAACTCAAGATATTAACTTCTGTAGTGAATCAGACGAATGA
Protein sequence

>Msa1454790

MVLKAPLLLPVSTSVITFSLNPNLSSMRSTFTLFRNLTLSTLHLPRTLPSLLHLRRFPLNCVGNVEQWLLHQDLPDNNDIFRFAGVEEAEENKRLPRPEVDVKELSEVPELWRRSRVAWLCKELPAHKAGTLIRILNGQRKWLRQDDATYIIMHCLRIRENETAFRVYKWMMQRSWYRFDFALSTRLADYMGKERKFTKCREVFDDIINQGRVPSESTFHILIVAYLSSSVQGCLDDAFDIFHRMIQLGGYQPRLSLHNSLFKALISEPGNFSKQYLKQAEFIYHRLVTNGLDVHKDIYGGLIWLHSYQDSIDKERIEALRQEMLRAGIDENQEVLVSILRACAREGEVEEAEKTWSKLLQFESNPPSQAFVYKMEVHSKVGMPMKSLEIFREMKLKLGKIGVAAYNKIIEILCKAQESEFAESIMTDFVKSGLKPLTPSYVYLLNMYFNMESHDKLEEAFSQCLEKCHPNSVIYSIYLDSLVKVGKIDKAGDIFSQMFRDASIGVNARSCNIILHGYLYSGNHLKAEKIYDLMCQNKYEIDAPLMEKLEYIQSLRRKIIKKPMSLKLNKEQREILIGMLLAGLQIDSDDKNKNHIIHFNFDGNSVSHYVLKSHIHRQFYEWLHPTSKPSGDSENIPDKFCTIASSHFGFYANQFWPNGQPTIPKLVHRWLSPCVLAYWYMYGGHRNSSGDVLLKIKGSREGVENIVKKFKAMSIDCKVKGKGKVFWIGILGSNTTWFWKLVEPYILEDVRDFTKAGVNIMRQDLTETQDINFCSESDE*