AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar zhongmu-4 / Msa1342630

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa1342630 MtrunA17_Chr4g0066951 98.148 1026 18 1 1 1025 1 1026 0.0 2075
Msa1342630 MtrunA17_Chr1g0170011 30.078 1024 495 28 2 1005 7 829 1.86e-137 434
Msa1342630 MtrunA17_Chr2g0311931 29.980 1024 496 28 2 1005 7 829 5.30e-135 427
Msa1342630 MtrunA17_Chr2g0311941 30.536 989 483 26 1 969 6 810 5.26e-132 420
Msa1342630 MtrunA17_Chr4g0065151 25.621 1007 545 26 15 1005 140 958 2.80e-95 324
Msa1342630 MtrunA17_Chr4g0040791 41.045 134 73 1 10 143 53 180 4.52e-24 108
Msa1342630 MtrunA17_Chr3g0130991 39.306 173 84 5 7 169 70 231 6.46e-23 105
Msa1342630 MtrunA17_Chr1g0173551 42.857 133 74 1 11 143 79 209 1.86e-22 103
Msa1342630 MtrunA17_Chr4g0056591 39.850 133 80 0 12 144 90 222 2.39e-20 97.1
Msa1342630 MtrunA17_Chr7g0231931 40.441 136 74 3 14 144 62 195 8.48e-20 95.5
Msa1342630 MtrunA17_Chr7g0216911 37.241 145 73 3 14 143 67 208 8.55e-20 95.1
Msa1342630 MtrunA17_Chr2g0286711 36.691 139 77 3 12 143 53 187 3.32e-15 80.5
Msa1342630 MtrunA17_Chr2g0311731 48.000 75 37 1 2 76 7 79 5.61e-14 69.7
Msa1342630 MtrunA17_Chr3g0116821 36.552 145 72 8 10 144 87 221 2.28e-11 67.4
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa1342630 AT3G22980.1 68.665 1034 289 14 7 1025 2 1015 0.0 1412
Msa1342630 AT3G22980.3 68.665 1034 289 14 7 1025 2 1015 0.0 1412
Msa1342630 AT3G22980.2 68.665 1034 289 14 7 1025 2 1015 0.0 1412
Msa1342630 AT1G56070.3 30.078 1024 495 27 2 1005 7 829 1.60e-135 429
Msa1342630 AT1G56070.2 30.078 1024 495 27 2 1005 7 829 1.60e-135 429
Msa1342630 AT1G56070.1 30.078 1024 495 27 2 1005 7 829 1.60e-135 429
Msa1342630 AT3G12915.2 28.487 1018 457 29 9 1008 13 777 2.84e-117 379
Msa1342630 AT1G06220.1 26.482 1012 532 28 14 1005 138 957 6.63e-97 329
Msa1342630 AT1G06220.3 26.482 1012 532 28 14 1005 138 957 6.63e-97 329
Msa1342630 AT1G06220.2 26.482 1012 532 28 14 1005 138 957 6.63e-97 329
Msa1342630 AT5G25230.2 25.992 1008 542 27 14 1005 124 943 1.78e-93 319
Msa1342630 AT5G25230.1 25.992 1008 542 27 14 1005 124 943 1.78e-93 319
Msa1342630 AT2G31060.2 41.045 134 73 1 10 143 55 182 2.62e-24 109
Msa1342630 AT5G13650.2 42.857 133 74 1 11 143 80 210 1.70e-23 107
Msa1342630 AT5G13650.1 42.857 133 74 1 11 143 79 209 1.75e-23 107
Msa1342630 AT2G31060.3 39.855 138 73 2 10 143 55 186 1.69e-22 104
Msa1342630 AT5G08650.2 39.752 161 82 4 13 169 85 234 3.81e-22 102
Msa1342630 AT5G08650.1 40.000 160 81 4 14 169 86 234 4.56e-22 102
Msa1342630 AT5G39900.1 39.716 141 73 3 12 143 64 201 9.90e-22 101
Msa1342630 AT1G62750.1 31.336 217 123 3 12 202 94 310 1.90e-20 97.8
Msa1342630 AT1G62750.1 31.461 178 105 5 438 614 412 573 2.82e-11 68.2
Msa1342630 AT1G45332.1 37.226 137 79 3 13 144 64 198 2.57e-18 90.9
Msa1342630 AT2G45030.1 37.226 137 79 3 13 144 64 198 2.81e-18 90.9
Msa1342630 AT4G20360.1 34.722 144 76 7 10 144 74 208 6.88e-11 66.2
Msa1342630 AT4G20360.2 34.722 144 76 7 10 144 74 208 6.88e-11 66.2

Find 261 sgRNAs with CRISPR-Local

Find 309 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
GAATACCACTACTGAATATT+TGG 0.116576 tig0005973:-25638 Msa1342630:CDS
GCCTTGGATGGTTGGGGTTT+TGG 0.142750 tig0005973:-27662 Msa1342630:CDS
TCAATAGCAACCCTCAAAAT+TGG 0.184362 tig0005973:+26717 None:intergenic
CCAACAATCATCTTTGTCTT+TGG 0.190248 tig0005973:+27545 None:intergenic
AGGATTGTTCATGAGGTTAA+TGG 0.261482 tig0005973:-27836 Msa1342630:CDS
GTACTTTCTGCTTTAATATC+AGG 0.262894 tig0005973:+26060 None:intergenic
TGCATTGCTGAGGGCTTTGT+GGG 0.268761 tig0005973:-27585 Msa1342630:CDS
CTTCTTGTTGATGCTGTTGA+AGG 0.278744 tig0005973:-27995 Msa1342630:CDS
AATGATATCTCCAAGTAAAT+TGG 0.283063 tig0005973:+26323 None:intergenic
TGCTTGTGCCTTGGATGGTT+GGG 0.292511 tig0005973:-27669 Msa1342630:CDS
TTCATGAGGTTAATGGGATT+TGG 0.295727 tig0005973:-27829 Msa1342630:CDS
GTTCCTGTTTCTGAGAGTTT+TGG 0.303911 tig0005973:-25523 Msa1342630:CDS
GATGTGGATGCTCTTCTTGC+TGG 0.314710 tig0005973:-27776 Msa1342630:CDS
GGTGCGTGAGTTGCAGAATA+AGG 0.316016 tig0005973:-27378 Msa1342630:CDS
GCCATCTGACCCTGCAGATA+TGG 0.317849 tig0005973:-26694 Msa1342630:CDS
CAAAATTCGAGCCCGTCTTC+GGG 0.321897 tig0005973:+25594 None:intergenic
GTGCATTGCTGAGGGCTTTG+TGG 0.325652 tig0005973:-27586 Msa1342630:CDS
TCAAAATTCGAGCCCGTCTT+CGG 0.326231 tig0005973:+25593 None:intergenic
CGGACTTTACCTGCTACCTT+TGG 0.335033 tig0005973:+28184 None:intergenic
GAAGAGGAAATCGAAGAGTT+TGG 0.336931 tig0005973:-25394 Msa1342630:CDS
TGAAACGCCATACTCGAAAA+AGG 0.342196 tig0005973:+26747 None:intergenic
GATCAGTATGGCATCTTTGC+AGG 0.345890 tig0005973:-25751 Msa1342630:CDS
TCGGATATCGCGGTTGATTC+CGG 0.347638 tig0005973:-27246 Msa1342630:CDS
CAATAGCAACCCTCAAAATT+GGG 0.348592 tig0005973:+26718 None:intergenic
CTTGAGAGTAATGTTATAAC+CGG 0.348769 tig0005973:-25901 Msa1342630:CDS
ATCGGATTGTTGGTGTGTTT+CGG 0.364189 tig0005973:+25771 None:intergenic
AATTTACTTGGAGATATCAT+TGG 0.366730 tig0005973:-26321 Msa1342630:CDS
TATGCATGCACAGTGAATAA+AGG 0.369453 tig0005973:+25547 None:intergenic
GGATTGTTCATGAGGTTAAT+GGG 0.370361 tig0005973:-27835 Msa1342630:CDS
CTTGCTGGTGGGACTGCTGC+TGG 0.371930 tig0005973:-27761 Msa1342630:CDS
CTTCAGTACCATAGACAAAA+TGG 0.372617 tig0005973:+27301 None:intergenic
CGCGGCCGCTAGCGGCGGCA+TGG 0.382610 tig0005973:-28212 Msa1342630:CDS
AAGATGATTGTTGGAAAGAA+AGG 0.383591 tig0005973:-27536 Msa1342630:CDS
GTTGCAGAATAAGGATTCTA+AGG 0.384391 tig0005973:-27369 Msa1342630:CDS
AATACCACTACTGAATATTT+GGG 0.385403 tig0005973:-25637 Msa1342630:CDS
GAGCTTAGAAGTCGGACTTC+TGG 0.385503 tig0005973:-25490 Msa1342630:CDS
GATGAAAGTGCCAATTTACT+TGG 0.390095 tig0005973:-26333 Msa1342630:CDS
AATGCTTCCTCCTCTTCAAC+CGG 0.391356 tig0005973:-27078 Msa1342630:CDS
ATGCATGCACAGTGAATAAA+GGG 0.393407 tig0005973:+25548 None:intergenic
CGCAAGGTTGGTTCTGAGAA+TGG 0.393995 tig0005973:-27221 Msa1342630:CDS
CACTTCTTGCCCTTAGCCAT+TGG 0.401083 tig0005973:-25456 Msa1342630:CDS
GCAAGGTTGGTTCTGAGAAT+GGG 0.401619 tig0005973:-27220 Msa1342630:CDS
GTTGTTGCTATCCGAGGACT+TGG 0.404103 tig0005973:-26819 Msa1342630:CDS
CCAAAGACAAAGATGATTGT+TGG 0.405832 tig0005973:-27545 Msa1342630:CDS
AGCAGGTAAAGTCCGTTTCA+TGG 0.407831 tig0005973:-28176 Msa1342630:CDS
TGTTGTGTTTGCTTGTGCCT+TGG 0.408469 tig0005973:-27678 Msa1342630:CDS
GGCGCCTTGTGTTGCCTTTG+TGG 0.409336 tig0005973:-27126 Msa1342630:CDS
TTCCAACTAGCAACTTCAGC+TGG 0.409889 tig0005973:-25877 Msa1342630:CDS
TCATCATGATGCCCTGTAGA+TGG 0.410798 tig0005973:+25796 None:intergenic
TCATCTTGAGAGATGCATAA+AGG 0.412622 tig0005973:-26568 Msa1342630:CDS
GTTCTGAGAATGGGGTTGAT+AGG 0.416739 tig0005973:-27211 Msa1342630:CDS
TTCTGCCCTTCCACAGGATC+CGG 0.418788 tig0005973:+27272 None:intergenic
TTTCTTCTACTAGGAATTGT+TGG 0.420259 tig0005973:-26770 Msa1342630:CDS
GATTTGGAGTGCTTATAATT+CGG 0.424227 tig0005973:-27813 Msa1342630:CDS
AAACCAAAACTCTCAGAAAC+AGG 0.424643 tig0005973:+25520 None:intergenic
TCCCTCAATGGTCTCTTTGT+AGG 0.427079 tig0005973:+26491 None:intergenic
ACTTCTTGCCCTTAGCCATT+GGG 0.428321 tig0005973:-25455 Msa1342630:CDS
GGAGCACTTGGTGGAGGTAA+AGG 0.429670 tig0005973:-27443 Msa1342630:CDS
TATGGTACTGAAGTGTCTTC+CGG 0.432313 tig0005973:-27291 Msa1342630:CDS
ATTTATGCTTCAAAGCTTGA+TGG 0.433520 tig0005973:-27620 Msa1342630:CDS
TACATTGCTTCCACAAGTCT+TGG 0.436053 tig0005973:+25673 None:intergenic
CACATAGGTTCATCGCATAA+AGG 0.438054 tig0005973:+25853 None:intergenic
CAACCGTCAAAGATGCTTGT+AGG 0.438979 tig0005973:-25717 Msa1342630:CDS
TTCCCTACAAGCATCTTTGA+CGG 0.441387 tig0005973:+25714 None:intergenic
TTGCTTGTGCCTTGGATGGT+TGG 0.441415 tig0005973:-27670 Msa1342630:CDS
TCAGGAGTGAAAAGAACGTT+CGG 0.441651 tig0005973:+26078 None:intergenic
GCACGTATATCTCCATCTAC+AGG 0.445500 tig0005973:-25808 Msa1342630:CDS
CACCAACAATCCGATCAGTA+TGG 0.446428 tig0005973:-25763 Msa1342630:CDS
TGTGTTGGAGCCTTTGTGGC+AGG 0.452127 tig0005973:-27474 Msa1342630:CDS
TGAGGGCTTTGTGGGGTCCA+TGG 0.453023 tig0005973:-27577 Msa1342630:CDS
GAACATGTTCTTGCCGCAGC+TGG 0.454419 tig0005973:-26597 Msa1342630:CDS
GCTCGTGAGGAAGTCGGTGC+TGG 0.454954 tig0005973:-27168 Msa1342630:CDS
CTGAGAATGGGGTTGATAGG+AGG 0.458728 tig0005973:-27208 Msa1342630:CDS
CAGCATCCATATACAAAACT+TGG 0.459249 tig0005973:+25929 None:intergenic
TATGTTTGTTCAGTTTGTGT+TGG 0.460631 tig0005973:-27489 Msa1342630:CDS
CCTTTGTGGCAGGTTTATCA+AGG 0.461033 tig0005973:-27464 Msa1342630:CDS
TCTCAACTATCTGAAAGGTT+GGG 0.461561 tig0005973:-26009 Msa1342630:CDS
CTCTCAACTATCTGAAAGGT+TGG 0.461587 tig0005973:-26010 Msa1342630:CDS
CGATGAACCTATGTGGGGTT+TGG 0.466943 tig0005973:-25845 Msa1342630:CDS
GAGATGCATAAAGGATTTGA+AGG 0.467444 tig0005973:-26559 Msa1342630:CDS
TAGGTTTGCAAAAGTAAGCT+TGG 0.468812 tig0005973:-26535 Msa1342630:CDS
AGATGATTGTTGGAAAGAAA+GGG 0.469790 tig0005973:-27535 Msa1342630:CDS
AGCAGTGCACCCATATCTGC+AGG 0.469841 tig0005973:+26684 None:intergenic
TGAGAATGGGGTTGATAGGA+GGG 0.470099 tig0005973:-27207 Msa1342630:CDS
GTTGGAAAGAAAGGGATTAG+TGG 0.472589 tig0005973:-27527 Msa1342630:CDS
GCATTTGCTAGAATATTTAG+TGG 0.473069 tig0005973:-27002 Msa1342630:CDS
CGGTGCTGGAGTGTGATTGT+AGG 0.473899 tig0005973:-27154 Msa1342630:CDS
GAGAACAAATATACTCGAAA+AGG 0.474540 tig0005973:-26259 Msa1342630:CDS
CCATCTGACCCTGCAGATAT+GGG 0.476099 tig0005973:-26693 Msa1342630:CDS
CTTTGTATGATCCTTTGAAA+GGG 0.476407 tig0005973:-26941 Msa1342630:CDS
TCGGGAAAGTACACCATACA+TGG 0.477428 tig0005973:+25612 None:intergenic
TGCTGCTGGAGGTGAAGTTA+TGG 0.477624 tig0005973:-27747 Msa1342630:CDS
GAGCACTTGGTGGAGGTAAA+GGG 0.477914 tig0005973:-27442 Msa1342630:CDS
GAAATCCATGTATCTGATGA+TGG 0.478062 tig0005973:-26883 Msa1342630:CDS
TGAATTGAATCTCACTCCTA+TGG 0.478372 tig0005973:-27879 Msa1342630:CDS
GTGGATGCTCTTCTTGCTGG+TGG 0.482382 tig0005973:-27773 Msa1342630:CDS
TTGATTCCGGAGCGCAAGGT+TGG 0.484890 tig0005973:-27233 Msa1342630:CDS
GCTTGTGCCTTGGATGGTTG+GGG 0.487666 tig0005973:-27668 Msa1342630:CDS
ATGCTGTTCTTCGACAATGC+TGG 0.489522 tig0005973:-27955 Msa1342630:CDS
GTGCTACACTTTCTTCTACT+AGG 0.490296 tig0005973:-26779 Msa1342630:CDS
GCTTTGTATGATCCTTTGAA+AGG 0.490941 tig0005973:-26942 Msa1342630:CDS
TGCATTGATTCCCCTTTCAA+AGG 0.492047 tig0005973:+26930 None:intergenic
GAATATTTGGGTCCCATGTA+TGG 0.492420 tig0005973:-25625 Msa1342630:CDS
GTATGGCATCTTTGCAGGGC+AGG 0.494064 tig0005973:-25746 Msa1342630:CDS
CAGGAGTGAAAAGAACGTTC+GGG 0.494371 tig0005973:+26079 None:intergenic
GTGTTTGCTTGTGCCTTGGA+TGG 0.496579 tig0005973:-27674 Msa1342630:CDS
GCGTACAAGGCATCTTCCAT+TGG 0.497596 tig0005973:+26398 None:intergenic
GTTGGATACCTCTCCCTCAA+TGG 0.499015 tig0005973:+26479 None:intergenic
CCCATATCTGCAGGGTCAGA+TGG 0.499692 tig0005973:+26693 None:intergenic
AGTTTGTGTTGGAGCCTTTG+TGG 0.500525 tig0005973:-27478 Msa1342630:CDS
GCAGTGAAATCTGCAAAAGC+AGG 0.503634 tig0005973:-26846 Msa1342630:CDS
CTAGTGTGGGTGCATTGCTG+AGG 0.503657 tig0005973:-27595 Msa1342630:CDS
TTTATGCGATGAACCTATGT+GGG 0.508642 tig0005973:-25851 Msa1342630:CDS
AAAGCTTGATGGTGCTAGTG+TGG 0.510747 tig0005973:-27609 Msa1342630:CDS
TTCAAGCTGTCATGAGTCGT+TGG 0.511125 tig0005973:-27340 Msa1342630:CDS
TCAGAACCAACCTTGCGCTC+CGG 0.511507 tig0005973:+27227 None:intergenic
TGGATGCTCTTCTTGCTGGT+GGG 0.512690 tig0005973:-27772 Msa1342630:CDS
CAGGTTTATCAAGGAGCACT+TGG 0.514373 tig0005973:-27455 Msa1342630:CDS
TGGTGTACTTTCCCGAAGAC+GGG 0.517059 tig0005973:-25605 Msa1342630:CDS
CTTTGTACCTAAAACAGAAG+AGG 0.518110 tig0005973:-25410 Msa1342630:CDS
TGCCATACTGATCGGATTGT+TGG 0.519169 tig0005973:+25761 None:intergenic
GTAGTGCTTCCCAATGGCTA+AGG 0.519457 tig0005973:+25446 None:intergenic
GGAGAAATATTTATCTGATG+TGG 0.519851 tig0005973:-27792 Msa1342630:CDS
CAAAGAGACCATTGAGGGAG+AGG 0.520660 tig0005973:-26487 Msa1342630:CDS
CGTACAAGGCATCTTCCATT+GGG 0.521539 tig0005973:+26399 None:intergenic
CTTATCGCGGCCGCTAGCGG+CGG 0.521844 tig0005973:-28217 Msa1342630:CDS
ATGAACCATGCCGCCGCTAG+CGG 0.524080 tig0005973:+28207 None:intergenic
TGGTCTCTTTGTAGGATACA+AGG 0.524197 tig0005973:+26499 None:intergenic
GCCCAGCTGAAGTTGCTAGT+TGG 0.525473 tig0005973:+25875 None:intergenic
AATCCGCAACATATGCATCT+TGG 0.528563 tig0005973:-28278 Msa1342630:CDS
GCATAAAGGATTTGAAGGAT+AGG 0.529507 tig0005973:-26554 Msa1342630:CDS
GATAAGTTTCAGCCTCAGAA+AGG 0.530658 tig0005973:-27704 Msa1342630:CDS
TCATCACCTGCACGCGTACA+AGG 0.531415 tig0005973:+26385 None:intergenic
AAATATACTGCCCAAGTCCT+CGG 0.531828 tig0005973:+26808 None:intergenic
CGAGACTTCTGCCCTTCCAC+AGG 0.532004 tig0005973:+27266 None:intergenic
GACAAAATGGCATCTGAAAG+AGG 0.532295 tig0005973:+27314 None:intergenic
CTGTGGAAGGGCAGAAGTCT+CGG 0.532966 tig0005973:-27265 Msa1342630:CDS
TGACGCAGTCAGACGGCGGA+AGG 0.533623 tig0005973:-25329 Msa1342630:CDS
GTTTATCAAGGAGCACTTGG+TGG 0.538668 tig0005973:-27452 Msa1342630:CDS
CCGCAGAAATCAATATGACC+AGG 0.539668 tig0005973:+28058 None:intergenic
GTCTTTGGATTATAATACCA+TGG 0.541223 tig0005973:+27560 None:intergenic
AGATCCGTTTGTTGAGGTCA+CGG 0.542436 tig0005973:-26634 Msa1342630:CDS
CCCAAAACCCCAACCATCCA+AGG 0.542784 tig0005973:+27661 None:intergenic
TATCAAGGAGCACTTGGTGG+AGG 0.543853 tig0005973:-27449 Msa1342630:CDS
GTGTCTTGTGTTGAATAAGA+TGG 0.545503 tig0005973:-27915 Msa1342630:CDS
CATCGAGATAATCCATGAAA+CGG 0.545676 tig0005973:+28164 None:intergenic
TCACCAAAACTCCCCTCCCC+CGG 0.547348 tig0005973:+27059 None:intergenic
GAAAGGGATTAGTGGTGCTA+AGG 0.548350 tig0005973:-27519 Msa1342630:CDS
ATGGTTCATCCAAAGGTAGC+AGG 0.549186 tig0005973:-28193 Msa1342630:CDS
TGGGGTTGATAGGAGGGTGG+TGG 0.550181 tig0005973:-27201 Msa1342630:CDS
AAAGAATAAGCCAAGACTTG+TGG 0.551478 tig0005973:-25683 Msa1342630:CDS
TGCAAAGATGCCATACTGAT+CGG 0.551715 tig0005973:+25753 None:intergenic
TGTCTTCCGGATCCTGTGGA+AGG 0.552039 tig0005973:-27278 Msa1342630:CDS
TGCTGTATTTGGAAGAACGC+TGG 0.552343 tig0005973:+25363 None:intergenic
ATGCTTCCTCCTCTTCAACC+GGG 0.553803 tig0005973:-27077 Msa1342630:CDS
AATTGATTGACGCAGTCAGA+CGG 0.555088 tig0005973:-25336 Msa1342630:CDS
GCATTGCTGAGGGCTTTGTG+GGG 0.555293 tig0005973:-27584 Msa1342630:CDS
AACCGTCAAAGATGCTTGTA+GGG 0.555356 tig0005973:-25716 Msa1342630:CDS
GGATTAGTGGTGCTAAGGCT+AGG 0.555837 tig0005973:-27514 Msa1342630:CDS
TGCTTCCTCCTCTTCAACCG+GGG 0.556090 tig0005973:-27076 Msa1342630:CDS
TAGTGTGGGTGCATTGCTGA+GGG 0.556582 tig0005973:-27594 Msa1342630:CDS
ATCAGAAAGACGCGCAGCGG+TGG 0.557020 tig0005973:+28027 None:intergenic
TTGAGAAGGATATGGGCACT+TGG 0.560001 tig0005973:-26117 Msa1342630:CDS
GCGGAAGGGCCTTCCTGTGG+AGG 0.561348 tig0005973:-25314 Msa1342630:CDS
TTATTCTGCAACTCACGCAC+CGG 0.561396 tig0005973:+27380 None:intergenic
ACGGCGGAAGGGCCTTCCTG+TGG 0.564400 tig0005973:-25317 Msa1342630:CDS
AAGGGCAAGAAGTGCACTTG+CGG 0.564870 tig0005973:+25465 None:intergenic
GCTGGTGGGACTGCTGCTGG+AGG 0.565778 tig0005973:-27758 Msa1342630:CDS
TCAAGCACCTTTGTGAGAGA+AGG 0.569629 tig0005973:+26354 None:intergenic
CCTGGTCATATTGATTTCTG+CGG 0.571264 tig0005973:-28058 Msa1342630:CDS
CTTTATGCGATGAACCTATG+TGG 0.571318 tig0005973:-25852 Msa1342630:CDS
ATGTATCTGATGATGGGTCA+AGG 0.571322 tig0005973:-26876 Msa1342630:CDS
ATGGTGTACTTTCCCGAAGA+CGG 0.571747 tig0005973:-25606 Msa1342630:CDS
TCCAACTAGCAACTTCAGCT+GGG 0.573171 tig0005973:-25876 Msa1342630:CDS
CAGTGAAATCTGCAAAAGCA+GGG 0.573492 tig0005973:-26845 Msa1342630:CDS
GAAACCGTGACCTCAACAAA+CGG 0.574038 tig0005973:+26630 None:intergenic
GCGGTTGATTCCGGAGCGCA+AGG 0.574413 tig0005973:-27237 Msa1342630:CDS
AATCTATGAGATTAATAGTG+TGG 0.575275 tig0005973:+28083 None:intergenic
ATCTTATTCAACACAAGACA+CGG 0.575644 tig0005973:+27917 None:intergenic
GAAATCGAAGAGTTTGGAGA+TGG 0.575696 tig0005973:-25388 Msa1342630:CDS
AACACAAACTGAACAAACAT+AGG 0.576928 tig0005973:+27491 None:intergenic
TCAATCTACATTTCTCAGCA+TGG 0.577614 tig0005973:+26154 None:intergenic
ATAAGTTTCAGCCTCAGAAA+GGG 0.577968 tig0005973:-27703 Msa1342630:CDS
TCCTACAAAGAGACCATTGA+GGG 0.578616 tig0005973:-26492 Msa1342630:CDS
GTTGAGAAAACGACGCCCAA+TGG 0.578924 tig0005973:-26414 Msa1342630:CDS
CGGCGGCATGGTTCATCCAA+AGG 0.579353 tig0005973:-28200 Msa1342630:CDS
GATATGGGTGCACTGCTCAA+AGG 0.580307 tig0005973:-26678 Msa1342630:CDS
ATCAGTATGGCATCTTTGCA+GGG 0.580507 tig0005973:-25750 Msa1342630:CDS
AGGTAAAGGGATGGTTGAGA+AGG 0.581811 tig0005973:-27429 Msa1342630:CDS
AACACAACATTCCCTTTCTG+AGG 0.584526 tig0005973:+27692 None:intergenic
TTGACCCATCATCAGATACA+TGG 0.585579 tig0005973:+26878 None:intergenic
TTGTGTTGAATAAGATGGAT+AGG 0.585990 tig0005973:-27910 Msa1342630:CDS
GGTCTCTTTGTAGGATACAA+GGG 0.586432 tig0005973:+26500 None:intergenic
GGTGCTGGAGTGTGATTGTA+GGG 0.586773 tig0005973:-27153 Msa1342630:CDS
ATTAATCTCATAGATTCCCC+TGG 0.589811 tig0005973:-28076 Msa1342630:CDS
AAGCTTGATGGTGCTAGTGT+GGG 0.592088 tig0005973:-27608 Msa1342630:CDS
TCGAGCAGATCCGTTTGTTG+AGG 0.592593 tig0005973:-26640 Msa1342630:CDS
AGATATCATTGGAATTAAGT+CGG 0.593860 tig0005973:-26310 Msa1342630:CDS
TGATTCTGGTAACAGTAACT+CGG 0.594560 tig0005973:-25977 Msa1342630:CDS
TAGTGCTTCCCAATGGCTAA+GGG 0.597253 tig0005973:+25447 None:intergenic
GGAGTGTGATTGTAGGGATG+AGG 0.597552 tig0005973:-27147 Msa1342630:CDS
GTCTTCCGGATCCTGTGGAA+GGG 0.597957 tig0005973:-27277 Msa1342630:CDS
GCTCGCGGACCAGCTTATCG+CGG 0.599602 tig0005973:-28230 Msa1342630:CDS
ACGTATTAGAACAGAGCTAT+CGG 0.600590 tig0005973:+26038 None:intergenic
TTTGTATGATCCTTTGAAAG+GGG 0.601759 tig0005973:-26940 Msa1342630:CDS
TTGAAAGAAGAGATGCAGGA+AGG 0.603921 tig0005973:-25574 Msa1342630:CDS
CCTTGATAAACCTGCCACAA+AGG 0.604152 tig0005973:+27464 None:intergenic
ACCATCAGAAAGACGCGCAG+CGG 0.604929 tig0005973:+28024 None:intergenic
TGAAGTTGCTAGTTGGAACC+CGG 0.605421 tig0005973:+25882 None:intergenic
AAGATGCCTTGTACGCGTGC+AGG 0.606329 tig0005973:-26391 Msa1342630:CDS
CTGAGAAATGTAGATTGAAG+TGG 0.609534 tig0005973:-26149 Msa1342630:CDS
TTGTTGCTATCCGAGGACTT+GGG 0.610937 tig0005973:-26818 Msa1342630:CDS
GTTCCTCTCAACTATCTGAA+AGG 0.612055 tig0005973:-26014 Msa1342630:CDS
CGCAGAAATCAATATGACCA+GGG 0.612612 tig0005973:+28059 None:intergenic
GACGCAGTCAGACGGCGGAA+GGG 0.613741 tig0005973:-25328 Msa1342630:CDS
CACGTATATCTCCATCTACA+GGG 0.613764 tig0005973:-25807 Msa1342630:CDS
GAGGTCACGGTTTCTACTAG+AGG 0.614892 tig0005973:-26621 Msa1342630:CDS
AAGATGAACTTCACCAGCTG+CGG 0.615194 tig0005973:+26584 None:intergenic
AATAGCAACCCTCAAAATTG+GGG 0.616469 tig0005973:+26719 None:intergenic
TAACAGTAACTCGGTTTCAG+AGG 0.617479 tig0005973:-25968 Msa1342630:CDS
GAAGTGTCTTCCGGATCCTG+TGG 0.618247 tig0005973:-27282 Msa1342630:CDS
ACAAATGCCAAACCCCACAT+AGG 0.619151 tig0005973:+25838 None:intergenic
TTCGCCACAAAGGCAACACA+AGG 0.619843 tig0005973:+27122 None:intergenic
GTGCACTGCTCAAAGGCTTG+AGG 0.620338 tig0005973:-26671 Msa1342630:CDS
CAAGGTTGGTTCTGAGAATG+GGG 0.620664 tig0005973:-27219 Msa1342630:CDS
GTCTGAGCTCGTGAGGAAGT+CGG 0.622214 tig0005973:-27174 Msa1342630:CDS
CCATTGGGAAGCACTACTTG+AGG 0.626135 tig0005973:-25440 Msa1342630:CDS
GGCAGAAGTCTCGGATATCG+CGG 0.626739 tig0005973:-27256 Msa1342630:CDS
AAATCCATGTATCTGATGAT+GGG 0.626929 tig0005973:-26882 Msa1342630:CDS
AATGCAAAAGCACATTCAAG+AGG 0.627991 tig0005973:-26913 Msa1342630:CDS
TTACTGATGAGCTTAGAAGT+CGG 0.631577 tig0005973:-25498 Msa1342630:CDS
TGCTGGAGGTGAAGTTATGG+AGG 0.636734 tig0005973:-27744 Msa1342630:CDS
TTATGCGATGAACCTATGTG+GGG 0.638304 tig0005973:-25850 Msa1342630:CDS
ATCTTGGCACACGTCGACCA+CGG 0.640233 tig0005973:-28262 Msa1342630:CDS
TGTATCTGATGATGGGTCAA+GGG 0.640891 tig0005973:-26875 Msa1342630:CDS
CCTCAAGTAGTGCTTCCCAA+TGG 0.646145 tig0005973:+25440 None:intergenic
TTGAGAGTAATGTTATAACC+GGG 0.646437 tig0005973:-25900 Msa1342630:CDS
GTCTCTTTGTAGGATACAAG+GGG 0.647669 tig0005973:+26501 None:intergenic
CCACGGCAAGACAACGCTCG+CGG 0.647806 tig0005973:-28245 Msa1342630:CDS
GGGTTTGGCATTTGTCATCG+AGG 0.649773 tig0005973:-25830 Msa1342630:CDS
GCTTCCTCCTCTTCAACCGG+GGG 0.652142 tig0005973:-27075 Msa1342630:CDS
TCTTTGTAGGATACAAGGGG+TGG 0.652209 tig0005973:+26504 None:intergenic
GCACTTGGACCGAGTTACAT+CGG 0.652674 tig0005973:-26102 Msa1342630:CDS
AGACGCGTATACGCTTCCAT+AGG 0.653047 tig0005973:+27863 None:intergenic
GAATGGGGTTGATAGGAGGG+TGG 0.654722 tig0005973:-27204 Msa1342630:CDS
GGGACCCAAATATTCAGTAG+TGG 0.656320 tig0005973:+25633 None:intergenic
CAACCTTTCAGATAGTTGAG+AGG 0.660111 tig0005973:+26011 None:intergenic
TGGAAGAGTCTGAGCTCGTG+AGG 0.663313 tig0005973:-27181 Msa1342630:CDS
GGGGACGTTGTTGCTATCCG+AGG 0.667972 tig0005973:-26825 Msa1342630:CDS
ACTTGGTGGAGGTAAAGGGA+TGG 0.669369 tig0005973:-27438 Msa1342630:CDS
AGTGAAATCTGCAAAAGCAG+GGG 0.670644 tig0005973:-26844 Msa1342630:CDS
ACTTCTACCTTCTCTCACAA+AGG 0.678671 tig0005973:-26361 Msa1342630:CDS
ATCCTACAAAGAGACCATTG+AGG 0.679814 tig0005973:-26493 Msa1342630:CDS
TGATTGACGCAGTCAGACGG+CGG 0.683864 tig0005973:-25333 Msa1342630:CDS
CGGGAAAGTACACCATACAT+GGG 0.690100 tig0005973:+25613 None:intergenic
TACAACATGGAACAAAGCAG+AGG 0.691102 tig0005973:-25282 Msa1342630:CDS
GCAGTGCACCCATATCTGCA+GGG 0.700362 tig0005973:+26685 None:intergenic
GATAGCTCTGTTCTAATACG+TGG 0.710395 tig0005973:-26036 Msa1342630:CDS
GCAGAAATCAATATGACCAG+GGG 0.714275 tig0005973:+28060 None:intergenic
GTGCCAAGATGCATATGTTG+CGG 0.715887 tig0005973:+28275 None:intergenic
TGCATGCACAGTGAATAAAG+GGG 0.760017 tig0005973:+25549 None:intergenic

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! AGTGATTAAAAAACGTATAA+TGG - tig0005973:27354-27373 Msa1342630:CDS 20.0%
!!! ATATGTTGCGGATTTTTTTA+CGG + tig0005973:25293-25312 None:intergenic 25.0%
! AATCTATGAGATTAATAGTG+TGG + tig0005973:25497-25516 None:intergenic 25.0%
! AATGATATCTCCAAGTAAAT+TGG + tig0005973:27257-27276 None:intergenic 25.0%
! AATTTACTTGGAGATATCAT+TGG - tig0005973:27256-27275 Msa1342630:CDS 25.0%
! AGATATCATTGGAATTAAGT+CGG - tig0005973:27267-27286 Msa1342630:CDS 25.0%
!!! TAAAACTTTTGAGAAGGATA+TGG - tig0005973:27452-27471 Msa1342630:CDS 25.0%
!!! AAAACTTTTGAGAAGGATAT+GGG - tig0005973:27453-27472 Msa1342630:CDS 25.0%
! AATACCACTACTGAATATTT+GGG - tig0005973:27940-27959 Msa1342630:CDS 25.0%
!!! ATCAATTTTCTTGCTGTATT+TGG + tig0005973:28228-28247 None:intergenic 25.0%
!!! TTTTTTACGGTCGTTGTTAT+CGG + tig0005973:25280-25299 None:intergenic 30.0%
ATCTTATTCAACACAAGACA+CGG + tig0005973:25663-25682 None:intergenic 30.0%
TTGTGTTGAATAAGATGGAT+AGG - tig0005973:25667-25686 Msa1342630:CDS 30.0%
! GATTTGGAGTGCTTATAATT+CGG - tig0005973:25764-25783 Msa1342630:CDS 30.0%
GGAGAAATATTTATCTGATG+TGG - tig0005973:25785-25804 Msa1342630:CDS 30.0%
ATTTATGCTTCAAAGCTTGA+TGG - tig0005973:25957-25976 Msa1342630:CDS 30.0%
GTCTTTGGATTATAATACCA+TGG + tig0005973:26020-26039 None:intergenic 30.0%
AAGATGATTGTTGGAAAGAA+AGG - tig0005973:26041-26060 Msa1342630:CDS 30.0%
AGATGATTGTTGGAAAGAAA+GGG - tig0005973:26042-26061 Msa1342630:CDS 30.0%
AACACAAACTGAACAAACAT+AGG + tig0005973:26089-26108 None:intergenic 30.0%
TATGTTTGTTCAGTTTGTGT+TGG - tig0005973:26088-26107 Msa1342630:CDS 30.0%
!!! GTCTTTTAATTTGCAGATTC+CGG - tig0005973:26178-26197 Msa1342630:CDS 30.0%
!!! TGAATCTGATGAGTGTTTTT+TGG - tig0005973:26553-26572 Msa1342630:CDS 30.0%
! GCATTTGCTAGAATATTTAG+TGG - tig0005973:26575-26594 Msa1342630:CDS 30.0%
! CTTTGTATGATCCTTTGAAA+GGG - tig0005973:26636-26655 Msa1342630:CDS 30.0%
! TTTGTATGATCCTTTGAAAG+GGG - tig0005973:26637-26656 Msa1342630:CDS 30.0%
AAATCCATGTATCTGATGAT+GGG - tig0005973:26695-26714 Msa1342630:CDS 30.0%
TTTCTTCTACTAGGAATTGT+TGG - tig0005973:26807-26826 Msa1342630:CDS 30.0%
! TTTCAAATTTTGCAGCATGT+TGG + tig0005973:27119-27138 None:intergenic 30.0%
GAGAACAAATATACTCGAAA+AGG - tig0005973:27318-27337 Msa1342630:CDS 30.0%
GTACTTTCTGCTTTAATATC+AGG + tig0005973:27520-27539 None:intergenic 30.0%
CTTGAGAGTAATGTTATAAC+CGG - tig0005973:27676-27695 Msa1342630:CDS 30.0%
TTGAGAGTAATGTTATAACC+GGG - tig0005973:27677-27696 Msa1342630:CDS 30.0%
GAATACCACTACTGAATATT+TGG - tig0005973:27939-27958 Msa1342630:CDS 30.0%
!! AATTTTGAAAGAAGAGATGC+AGG - tig0005973:27999-28018 Msa1342630:CDS 30.0%
!! TCTGTTTTAGGTACAAAGAA+AGG + tig0005973:28165-28184 None:intergenic 30.0%
CATCGAGATAATCCATGAAA+CGG + tig0005973:25416-25435 None:intergenic 35.0%
ATTAATCTCATAGATTCCCC+TGG - tig0005973:25501-25520 Msa1342630:CDS 35.0%
GTGTCTTGTGTTGAATAAGA+TGG - tig0005973:25662-25681 Msa1342630:CDS 35.0%
TGAATTGAATCTCACTCCTA+TGG - tig0005973:25698-25717 Msa1342630:CDS 35.0%
!! TCTTTTGAGGATTGTTCATG+AGG - tig0005973:25734-25753 Msa1342630:CDS 35.0%
AGGATTGTTCATGAGGTTAA+TGG - tig0005973:25741-25760 Msa1342630:CDS 35.0%
GGATTGTTCATGAGGTTAAT+GGG - tig0005973:25742-25761 Msa1342630:CDS 35.0%
TTCATGAGGTTAATGGGATT+TGG - tig0005973:25748-25767 Msa1342630:CDS 35.0%
ATAAGTTTCAGCCTCAGAAA+GGG - tig0005973:25874-25893 Msa1342630:CDS 35.0%
CCAACAATCATCTTTGTCTT+TGG + tig0005973:26035-26054 None:intergenic 35.0%
CCAAAGACAAAGATGATTGT+TGG - tig0005973:26032-26051 Msa1342630:CDS 35.0%
GTTGCAGAATAAGGATTCTA+AGG - tig0005973:26208-26227 Msa1342630:CDS 35.0%
!!! TTCAGATGCCATTTTGTCTA+TGG - tig0005973:26268-26287 Msa1342630:CDS 35.0%
CTTCAGTACCATAGACAAAA+TGG + tig0005973:26279-26298 None:intergenic 35.0%
! TTTAGTGGTGTTTTGTCTGT+TGG - tig0005973:26590-26609 Msa1342630:CDS 35.0%
! TTAGTGGTGTTTTGTCTGTT+GGG - tig0005973:26591-26610 Msa1342630:CDS 35.0%
! GCAGAGAGTTTTTGTGATTT+CGG - tig0005973:26613-26632 Msa1342630:CDS 35.0%
GCTTTGTATGATCCTTTGAA+AGG - tig0005973:26635-26654 Msa1342630:CDS 35.0%
! AATGCAAAAGCACATTCAAG+AGG - tig0005973:26664-26683 Msa1342630:CDS 35.0%
GAAATCCATGTATCTGATGA+TGG - tig0005973:26694-26713 Msa1342630:CDS 35.0%
AATAGCAACCCTCAAAATTG+GGG + tig0005973:26861-26880 None:intergenic 35.0%
CAATAGCAACCCTCAAAATT+GGG + tig0005973:26862-26881 None:intergenic 35.0%
TCAATAGCAACCCTCAAAAT+TGG + tig0005973:26863-26882 None:intergenic 35.0%
TCATCTTGAGAGATGCATAA+AGG - tig0005973:27009-27028 Msa1342630:CDS 35.0%
GAGATGCATAAAGGATTTGA+AGG - tig0005973:27018-27037 Msa1342630:CDS 35.0%
GCATAAAGGATTTGAAGGAT+AGG - tig0005973:27023-27042 Msa1342630:CDS 35.0%
TAGGTTTGCAAAAGTAAGCT+TGG - tig0005973:27042-27061 Msa1342630:CDS 35.0%
!! GATGAAAGTGCCAATTTACT+TGG - tig0005973:27244-27263 Msa1342630:CDS 35.0%
GGAGCAGACAGTTAAAAATT+TGG - tig0005973:27288-27307 Msa1342630:CDS 35.0%
!!! CGTTTTTTAATCACTTCAGC+TGG + tig0005973:27349-27368 None:intergenic 35.0%
! TTGAGAGTGACATTTTGTGT+AGG - tig0005973:27383-27402 Msa1342630:CDS 35.0%
TCAATCTACATTTCTCAGCA+TGG + tig0005973:27426-27445 None:intergenic 35.0%
CTGAGAAATGTAGATTGAAG+TGG - tig0005973:27428-27447 Msa1342630:CDS 35.0%
!! AGTGGCTAAAACTTTTGAGA+AGG - tig0005973:27446-27465 Msa1342630:CDS 35.0%
ACGTATTAGAACAGAGCTAT+CGG + tig0005973:27542-27561 None:intergenic 35.0%
TCTCAACTATCTGAAAGGTT+GGG - tig0005973:27568-27587 Msa1342630:CDS 35.0%
TGATTCTGGTAACAGTAACT+CGG - tig0005973:27600-27619 Msa1342630:CDS 35.0%
!! TGAGAGCCAAGTTTTGTATA+TGG - tig0005973:27642-27661 Msa1342630:CDS 35.0%
CAGCATCCATATACAAAACT+TGG + tig0005973:27651-27670 None:intergenic 35.0%
TTTATGCGATGAACCTATGT+GGG - tig0005973:27726-27745 Msa1342630:CDS 35.0%
AAAGAATAAGCCAAGACTTG+TGG - tig0005973:27894-27913 Msa1342630:CDS 35.0%
ATGCATGCACAGTGAATAAA+GGG + tig0005973:28032-28051 None:intergenic 35.0%
TATGCATGCACAGTGAATAA+AGG + tig0005973:28033-28052 None:intergenic 35.0%
AAACCAAAACTCTCAGAAAC+AGG + tig0005973:28060-28079 None:intergenic 35.0%
TTACTGATGAGCTTAGAAGT+CGG - tig0005973:28079-28098 Msa1342630:CDS 35.0%
CTTTGTACCTAAAACAGAAG+AGG - tig0005973:28167-28186 Msa1342630:CDS 35.0%
! TCGATTTCCTCTTCTGTTTT+AGG + tig0005973:28177-28196 None:intergenic 35.0%
GAGGAAAAAGTAGTACAACA+TGG - tig0005973:28282-28301 Msa1342630:CDS 35.0%
AATCCGCAACATATGCATCT+TGG - tig0005973:25299-25318 Msa1342630:CDS 40.0%
GCAGAAATCAATATGACCAG+GGG + tig0005973:25520-25539 None:intergenic 40.0%
CGCAGAAATCAATATGACCA+GGG + tig0005973:25521-25540 None:intergenic 40.0%
!! CCTGGTCATATTGATTTCTG+CGG - tig0005973:25519-25538 Msa1342630:CDS 40.0%
CTTCTTGTTGATGCTGTTGA+AGG - tig0005973:25582-25601 Msa1342630:CDS 40.0%
GATAAGTTTCAGCCTCAGAA+AGG - tig0005973:25873-25892 Msa1342630:CDS 40.0%
AACACAACATTCCCTTTCTG+AGG + tig0005973:25888-25907 None:intergenic 40.0%
GTTGGAAAGAAAGGGATTAG+TGG - tig0005973:26050-26069 Msa1342630:CDS 40.0%
GACAAAATGGCATCTGAAAG+AGG + tig0005973:26266-26285 None:intergenic 40.0%
! TATGGTACTGAAGTGTCTTC+CGG - tig0005973:26286-26305 Msa1342630:CDS 40.0%
! AGCAAACATTTTCGCCACAA+AGG + tig0005973:26468-26487 None:intergenic 40.0%
!!! AGAGGAGGAAGCATTTTAAC+AGG + tig0005973:26494-26513 None:intergenic 40.0%
!! TGCATTGATTCCCCTTTCAA+AGG + tig0005973:26650-26669 None:intergenic 40.0%
TTGACCCATCATCAGATACA+TGG + tig0005973:26702-26721 None:intergenic 40.0%
!! ATGTATCTGATGATGGGTCA+AGG - tig0005973:26701-26720 Msa1342630:CDS 40.0%
!! TGTATCTGATGATGGGTCAA+GGG - tig0005973:26702-26721 Msa1342630:CDS 40.0%
CAGTGAAATCTGCAAAAGCA+GGG - tig0005973:26732-26751 Msa1342630:CDS 40.0%
AGTGAAATCTGCAAAAGCAG+GGG - tig0005973:26733-26752 Msa1342630:CDS 40.0%
AAATATACTGCCCAAGTCCT+CGG + tig0005973:26772-26791 None:intergenic 40.0%
GTGCTACACTTTCTTCTACT+AGG - tig0005973:26798-26817 Msa1342630:CDS 40.0%
!!! TTGTTGGCCTTTTTCGAGTA+TGG - tig0005973:26823-26842 Msa1342630:CDS 40.0%
TGAAACGCCATACTCGAAAA+AGG + tig0005973:26833-26852 None:intergenic 40.0%
!!! TTCAAGTTGCCCCAATTTTG+AGG - tig0005973:26849-26868 Msa1342630:CDS 40.0%
!! TCAAGTTGCCCCAATTTTGA+GGG - tig0005973:26850-26869 Msa1342630:CDS 40.0%
GTCTCTTTGTAGGATACAAG+GGG + tig0005973:27079-27098 None:intergenic 40.0%
GGTCTCTTTGTAGGATACAA+GGG + tig0005973:27080-27099 None:intergenic 40.0%
TGGTCTCTTTGTAGGATACA+AGG + tig0005973:27081-27100 None:intergenic 40.0%
ATCCTACAAAGAGACCATTG+AGG - tig0005973:27084-27103 Msa1342630:CDS 40.0%
TCCTACAAAGAGACCATTGA+GGG - tig0005973:27085-27104 Msa1342630:CDS 40.0%
ACTTCTACCTTCTCTCACAA+AGG - tig0005973:27216-27235 Msa1342630:CDS 40.0%
TCAGGAGTGAAAAGAACGTT+CGG + tig0005973:27502-27521 None:intergenic 40.0%
! GATAGCTCTGTTCTAATACG+TGG - tig0005973:27541-27560 Msa1342630:CDS 40.0%
GTTCCTCTCAACTATCTGAA+AGG - tig0005973:27563-27582 Msa1342630:CDS 40.0%
CAACCTTTCAGATAGTTGAG+AGG + tig0005973:27569-27588 None:intergenic 40.0%
CTCTCAACTATCTGAAAGGT+TGG - tig0005973:27567-27586 Msa1342630:CDS 40.0%
!!! TTGGGTTTTGTTGCTGATTC+TGG - tig0005973:27586-27605 Msa1342630:CDS 40.0%
TAACAGTAACTCGGTTTCAG+AGG - tig0005973:27609-27628 Msa1342630:CDS 40.0%
CACATAGGTTCATCGCATAA+AGG + tig0005973:27727-27746 None:intergenic 40.0%
CTTTATGCGATGAACCTATG+TGG - tig0005973:27725-27744 Msa1342630:CDS 40.0%
TTATGCGATGAACCTATGTG+GGG - tig0005973:27727-27746 Msa1342630:CDS 40.0%
CACGTATATCTCCATCTACA+GGG - tig0005973:27770-27789 Msa1342630:CDS 40.0%
ATCGGATTGTTGGTGTGTTT+CGG + tig0005973:27809-27828 None:intergenic 40.0%
TGCAAAGATGCCATACTGAT+CGG + tig0005973:27827-27846 None:intergenic 40.0%
ATCAGTATGGCATCTTTGCA+GGG - tig0005973:27827-27846 Msa1342630:CDS 40.0%
AACCGTCAAAGATGCTTGTA+GGG - tig0005973:27861-27880 Msa1342630:CDS 40.0%
TTCCCTACAAGCATCTTTGA+CGG + tig0005973:27866-27885 None:intergenic 40.0%
TACATTGCTTCCACAAGTCT+TGG + tig0005973:27907-27926 None:intergenic 40.0%
GAATATTTGGGTCCCATGTA+TGG - tig0005973:27952-27971 Msa1342630:CDS 40.0%
TTGAAAGAAGAGATGCAGGA+AGG - tig0005973:28003-28022 Msa1342630:CDS 40.0%
TGCATGCACAGTGAATAAAG+GGG + tig0005973:28031-28050 None:intergenic 40.0%
!!! GTTCCTGTTTCTGAGAGTTT+TGG - tig0005973:28054-28073 Msa1342630:CDS 40.0%
GAAGAGGAAATCGAAGAGTT+TGG - tig0005973:28183-28202 Msa1342630:CDS 40.0%
GAAATCGAAGAGTTTGGAGA+TGG - tig0005973:28189-28208 Msa1342630:CDS 40.0%
AATTGATTGACGCAGTCAGA+CGG - tig0005973:28241-28260 Msa1342630:CDS 40.0%
!!! TGTACTACTTTTTCCTCCAC+AGG + tig0005973:28279-28298 None:intergenic 40.0%
TACAACATGGAACAAAGCAG+AGG - tig0005973:28295-28314 Msa1342630:CDS 40.0%
GTGCCAAGATGCATATGTTG+CGG + tig0005973:25305-25324 None:intergenic 45.0%
ATGGTTCATCCAAAGGTAGC+AGG - tig0005973:25384-25403 Msa1342630:CDS 45.0%
AGCAGGTAAAGTCCGTTTCA+TGG - tig0005973:25401-25420 Msa1342630:CDS 45.0%
CCGCAGAAATCAATATGACC+AGG + tig0005973:25522-25541 None:intergenic 45.0%
ATGCTGTTCTTCGACAATGC+TGG - tig0005973:25622-25641 Msa1342630:CDS 45.0%
! AAGCGTATACGCGTCTTTTG+AGG - tig0005973:25721-25740 Msa1342630:CDS 45.0%
TGTTGTGTTTGCTTGTGCCT+TGG - tig0005973:25899-25918 Msa1342630:CDS 45.0%
!! AAAGCTTGATGGTGCTAGTG+TGG - tig0005973:25968-25987 Msa1342630:CDS 45.0%
!! AAGCTTGATGGTGCTAGTGT+GGG - tig0005973:25969-25988 Msa1342630:CDS 45.0%
! GAAAGGGATTAGTGGTGCTA+AGG - tig0005973:26058-26077 Msa1342630:CDS 45.0%
AGTTTGTGTTGGAGCCTTTG+TGG - tig0005973:26099-26118 Msa1342630:CDS 45.0%
CCTTGATAAACCTGCCACAA+AGG + tig0005973:26116-26135 None:intergenic 45.0%
CCTTTGTGGCAGGTTTATCA+AGG - tig0005973:26113-26132 Msa1342630:CDS 45.0%
!! CAGGTTTATCAAGGAGCACT+TGG - tig0005973:26122-26141 Msa1342630:CDS 45.0%
!! GTTTATCAAGGAGCACTTGG+TGG - tig0005973:26125-26144 Msa1342630:CDS 45.0%
AGGTAAAGGGATGGTTGAGA+AGG - tig0005973:26148-26167 Msa1342630:CDS 45.0%
TTATTCTGCAACTCACGCAC+CGG + tig0005973:26200-26219 None:intergenic 45.0%
TTCAAGCTGTCATGAGTCGT+TGG - tig0005973:26237-26256 Msa1342630:CDS 45.0%
!! GCAAGGTTGGTTCTGAGAAT+GGG - tig0005973:26357-26376 Msa1342630:CDS 45.0%
!! CAAGGTTGGTTCTGAGAATG+GGG - tig0005973:26358-26377 Msa1342630:CDS 45.0%
!! GTTCTGAGAATGGGGTTGAT+AGG - tig0005973:26366-26385 Msa1342630:CDS 45.0%
!! TGAGAATGGGGTTGATAGGA+GGG - tig0005973:26370-26389 Msa1342630:CDS 45.0%
AATGCTTCCTCCTCTTCAAC+CGG - tig0005973:26499-26518 Msa1342630:CDS 45.0%
!! AGTTTTGGTGAGGAAGGTGA+GGG - tig0005973:26530-26549 Msa1342630:CDS 45.0%
GCAGTGAAATCTGCAAAAGC+AGG - tig0005973:26731-26750 Msa1342630:CDS 45.0%
TTGTTGCTATCCGAGGACTT+GGG - tig0005973:26759-26778 Msa1342630:CDS 45.0%
! AGATCCGTTTGTTGAGGTCA+CGG - tig0005973:26943-26962 Msa1342630:CDS 45.0%
GAAACCGTGACCTCAACAAA+CGG + tig0005973:26950-26969 None:intergenic 45.0%
AAGATGAACTTCACCAGCTG+CGG + tig0005973:26996-27015 None:intergenic 45.0%
TCTTTGTAGGATACAAGGGG+TGG + tig0005973:27076-27095 None:intergenic 45.0%
TCCCTCAATGGTCTCTTTGT+AGG + tig0005973:27089-27108 None:intergenic 45.0%
! CGTACAAGGCATCTTCCATT+GGG + tig0005973:27181-27200 None:intergenic 45.0%
TCAAGCACCTTTGTGAGAGA+AGG + tig0005973:27226-27245 None:intergenic 45.0%
TTGAGAAGGATATGGGCACT+TGG - tig0005973:27460-27479 Msa1342630:CDS 45.0%
CAGGAGTGAAAAGAACGTTC+GGG + tig0005973:27501-27520 None:intergenic 45.0%
TGAAGTTGCTAGTTGGAACC+CGG + tig0005973:27698-27717 None:intergenic 45.0%
TTCCAACTAGCAACTTCAGC+TGG - tig0005973:27700-27719 Msa1342630:CDS 45.0%
TCCAACTAGCAACTTCAGCT+GGG - tig0005973:27701-27720 Msa1342630:CDS 45.0%
ACAAATGCCAAACCCCACAT+AGG + tig0005973:27742-27761 None:intergenic 45.0%
GCACGTATATCTCCATCTAC+AGG - tig0005973:27769-27788 Msa1342630:CDS 45.0%
TCATCATGATGCCCTGTAGA+TGG + tig0005973:27784-27803 None:intergenic 45.0%
CACCAACAATCCGATCAGTA+TGG - tig0005973:27814-27833 Msa1342630:CDS 45.0%
TGCCATACTGATCGGATTGT+TGG + tig0005973:27819-27838 None:intergenic 45.0%
GATCAGTATGGCATCTTTGC+AGG - tig0005973:27826-27845 Msa1342630:CDS 45.0%
CAACCGTCAAAGATGCTTGT+AGG - tig0005973:27860-27879 Msa1342630:CDS 45.0%
GGGACCCAAATATTCAGTAG+TGG + tig0005973:27947-27966 None:intergenic 45.0%
! CGGGAAAGTACACCATACAT+GGG + tig0005973:27967-27986 None:intergenic 45.0%
! TCGGGAAAGTACACCATACA+TGG + tig0005973:27968-27987 None:intergenic 45.0%
ATGGTGTACTTTCCCGAAGA+CGG - tig0005973:27971-27990 Msa1342630:CDS 45.0%
TCAAAATTCGAGCCCGTCTT+CGG + tig0005973:27987-28006 None:intergenic 45.0%
ACTTCTTGCCCTTAGCCATT+GGG - tig0005973:28122-28141 Msa1342630:CDS 45.0%
TAGTGCTTCCCAATGGCTAA+GGG + tig0005973:28133-28152 None:intergenic 45.0%
TGCTGTATTTGGAAGAACGC+TGG + tig0005973:28217-28236 None:intergenic 45.0%
!!! CTACTTTTTCCTCCACAGGA+AGG + tig0005973:28275-28294 None:intergenic 45.0%
CGGACTTTACCTGCTACCTT+TGG + tig0005973:25396-25415 None:intergenic 50.0%
AGACGCGTATACGCTTCCAT+AGG + tig0005973:25717-25736 None:intergenic 50.0%
GATGTGGATGCTCTTCTTGC+TGG - tig0005973:25801-25820 Msa1342630:CDS 50.0%
TGGATGCTCTTCTTGCTGGT+GGG - tig0005973:25805-25824 Msa1342630:CDS 50.0%
TGCTGCTGGAGGTGAAGTTA+TGG - tig0005973:25830-25849 Msa1342630:CDS 50.0%
TGCTGGAGGTGAAGTTATGG+AGG - tig0005973:25833-25852 Msa1342630:CDS 50.0%
GTGTTTGCTTGTGCCTTGGA+TGG - tig0005973:25903-25922 Msa1342630:CDS 50.0%
TTGCTTGTGCCTTGGATGGT+TGG - tig0005973:25907-25926 Msa1342630:CDS 50.0%
TGCTTGTGCCTTGGATGGTT+GGG - tig0005973:25908-25927 Msa1342630:CDS 50.0%
! CCTTGGATGGTTGGGGTTTT+GGG - tig0005973:25916-25935 Msa1342630:CDS 50.0%
TAGTGTGGGTGCATTGCTGA+GGG - tig0005973:25983-26002 Msa1342630:CDS 50.0%
! TGCATTGCTGAGGGCTTTGT+GGG - tig0005973:25992-26011 Msa1342630:CDS 50.0%
! GGATTAGTGGTGCTAAGGCT+AGG - tig0005973:26063-26082 Msa1342630:CDS 50.0%
!! TATCAAGGAGCACTTGGTGG+AGG - tig0005973:26128-26147 Msa1342630:CDS 50.0%
! GAGCACTTGGTGGAGGTAAA+GGG - tig0005973:26135-26154 Msa1342630:CDS 50.0%
! ACTTGGTGGAGGTAAAGGGA+TGG - tig0005973:26139-26158 Msa1342630:CDS 50.0%
GGTGCGTGAGTTGCAGAATA+AGG - tig0005973:26199-26218 Msa1342630:CDS 50.0%
! TCGGATATCGCGGTTGATTC+CGG - tig0005973:26331-26350 Msa1342630:CDS 50.0%
!! CGCAAGGTTGGTTCTGAGAA+TGG - tig0005973:26356-26375 Msa1342630:CDS 50.0%
!! CTGAGAATGGGGTTGATAGG+AGG - tig0005973:26369-26388 Msa1342630:CDS 50.0%
! GGTGCTGGAGTGTGATTGTA+GGG - tig0005973:26424-26443 Msa1342630:CDS 50.0%
GGAGTGTGATTGTAGGGATG+AGG - tig0005973:26430-26449 Msa1342630:CDS 50.0%
TTCGCCACAAAGGCAACACA+AGG + tig0005973:26458-26477 None:intergenic 50.0%
ATGCTTCCTCCTCTTCAACC+GGG - tig0005973:26500-26519 Msa1342630:CDS 50.0%
!! GAGTTTTGGTGAGGAAGGTG+AGG - tig0005973:26529-26548 Msa1342630:CDS 50.0%
GTTGTTGCTATCCGAGGACT+TGG - tig0005973:26758-26777 Msa1342630:CDS 50.0%
CCATCTGACCCTGCAGATAT+GGG - tig0005973:26884-26903 Msa1342630:CDS 50.0%
GATATGGGTGCACTGCTCAA+AGG - tig0005973:26899-26918 Msa1342630:CDS 50.0%
! TCGAGCAGATCCGTTTGTTG+AGG - tig0005973:26937-26956 Msa1342630:CDS 50.0%
GAGGTCACGGTTTCTACTAG+AGG - tig0005973:26956-26975 Msa1342630:CDS 50.0%
CAAAGAGACCATTGAGGGAG+AGG - tig0005973:27090-27109 Msa1342630:CDS 50.0%
GTTGGATACCTCTCCCTCAA+TGG + tig0005973:27101-27120 None:intergenic 50.0%
GTTGAGAAAACGACGCCCAA+TGG - tig0005973:27163-27182 Msa1342630:CDS 50.0%
! GCGTACAAGGCATCTTCCAT+TGG + tig0005973:27182-27201 None:intergenic 50.0%
GCACTTGGACCGAGTTACAT+CGG - tig0005973:27475-27494 Msa1342630:CDS 50.0%
CGATGAACCTATGTGGGGTT+TGG - tig0005973:27732-27751 Msa1342630:CDS 50.0%
GGGTTTGGCATTTGTCATCG+AGG - tig0005973:27747-27766 Msa1342630:CDS 50.0%
TGGTGTACTTTCCCGAAGAC+GGG - tig0005973:27972-27991 Msa1342630:CDS 50.0%
CAAAATTCGAGCCCGTCTTC+GGG + tig0005973:27986-28005 None:intergenic 50.0%
GAGCTTAGAAGTCGGACTTC+TGG - tig0005973:28087-28106 Msa1342630:CDS 50.0%
! AAGGGCAAGAAGTGCACTTG+CGG + tig0005973:28115-28134 None:intergenic 50.0%
CACTTCTTGCCCTTAGCCAT+TGG - tig0005973:28121-28140 Msa1342630:CDS 50.0%
GTAGTGCTTCCCAATGGCTA+AGG + tig0005973:28134-28153 None:intergenic 50.0%
CCTCAAGTAGTGCTTCCCAA+TGG + tig0005973:28140-28159 None:intergenic 50.0%
!! CCATTGGGAAGCACTACTTG+AGG - tig0005973:28137-28156 Msa1342630:CDS 50.0%
ATCTTGGCACACGTCGACCA+CGG - tig0005973:25315-25334 Msa1342630:CDS 55.0%
ACCATCAGAAAGACGCGCAG+CGG + tig0005973:25556-25575 None:intergenic 55.0%
GTGGATGCTCTTCTTGCTGG+TGG - tig0005973:25804-25823 Msa1342630:CDS 55.0%
GCTTGTGCCTTGGATGGTTG+GGG - tig0005973:25909-25928 Msa1342630:CDS 55.0%
! GCCTTGGATGGTTGGGGTTT+TGG - tig0005973:25915-25934 Msa1342630:CDS 55.0%
CCCAAAACCCCAACCATCCA+AGG + tig0005973:25919-25938 None:intergenic 55.0%
CTAGTGTGGGTGCATTGCTG+AGG - tig0005973:25982-26001 Msa1342630:CDS 55.0%
GTGCATTGCTGAGGGCTTTG+TGG - tig0005973:25991-26010 Msa1342630:CDS 55.0%
! GCATTGCTGAGGGCTTTGTG+GGG - tig0005973:25993-26012 Msa1342630:CDS 55.0%
TGTGTTGGAGCCTTTGTGGC+AGG - tig0005973:26103-26122 Msa1342630:CDS 55.0%
! GGAGCACTTGGTGGAGGTAA+AGG - tig0005973:26134-26153 Msa1342630:CDS 55.0%
! GAAGTGTCTTCCGGATCCTG+TGG - tig0005973:26295-26314 Msa1342630:CDS 55.0%
TGTCTTCCGGATCCTGTGGA+AGG - tig0005973:26299-26318 Msa1342630:CDS 55.0%
GTCTTCCGGATCCTGTGGAA+GGG - tig0005973:26300-26319 Msa1342630:CDS 55.0%
TTCTGCCCTTCCACAGGATC+CGG + tig0005973:26308-26327 None:intergenic 55.0%
CTGTGGAAGGGCAGAAGTCT+CGG - tig0005973:26312-26331 Msa1342630:CDS 55.0%
GGCAGAAGTCTCGGATATCG+CGG - tig0005973:26321-26340 Msa1342630:CDS 55.0%
TTGATTCCGGAGCGCAAGGT+TGG - tig0005973:26344-26363 Msa1342630:CDS 55.0%
TCAGAACCAACCTTGCGCTC+CGG + tig0005973:26353-26372 None:intergenic 55.0%
!! GAATGGGGTTGATAGGAGGG+TGG - tig0005973:26373-26392 Msa1342630:CDS 55.0%
TGGAAGAGTCTGAGCTCGTG+AGG - tig0005973:26396-26415 Msa1342630:CDS 55.0%
GTCTGAGCTCGTGAGGAAGT+CGG - tig0005973:26403-26422 Msa1342630:CDS 55.0%
! CGGTGCTGGAGTGTGATTGT+AGG - tig0005973:26423-26442 Msa1342630:CDS 55.0%
TGCTTCCTCCTCTTCAACCG+GGG - tig0005973:26501-26520 Msa1342630:CDS 55.0%
!! GAGGGGAGTTTTGGTGAGGA+AGG - tig0005973:26524-26543 Msa1342630:CDS 55.0%
GCCATCTGACCCTGCAGATA+TGG - tig0005973:26883-26902 Msa1342630:CDS 55.0%
CCCATATCTGCAGGGTCAGA+TGG + tig0005973:26887-26906 None:intergenic 55.0%
GCAGTGCACCCATATCTGCA+GGG + tig0005973:26895-26914 None:intergenic 55.0%
AGCAGTGCACCCATATCTGC+AGG + tig0005973:26896-26915 None:intergenic 55.0%
GTGCACTGCTCAAAGGCTTG+AGG - tig0005973:26906-26925 Msa1342630:CDS 55.0%
GAACATGTTCTTGCCGCAGC+TGG - tig0005973:26980-26999 Msa1342630:CDS 55.0%
AAGATGCCTTGTACGCGTGC+AGG - tig0005973:27186-27205 Msa1342630:CDS 55.0%
TCATCACCTGCACGCGTACA+AGG + tig0005973:27195-27214 None:intergenic 55.0%
ACGTTCGGGCCGATGTAACT+CGG + tig0005973:27487-27506 None:intergenic 55.0%
GCCCAGCTGAAGTTGCTAGT+TGG + tig0005973:27705-27724 None:intergenic 55.0%
GTATGGCATCTTTGCAGGGC+AGG - tig0005973:27831-27850 Msa1342630:CDS 55.0%
TGATTGACGCAGTCAGACGG+CGG - tig0005973:28244-28263 Msa1342630:CDS 55.0%
ATGAACCATGCCGCCGCTAG+CGG + tig0005973:25373-25392 None:intergenic 60.0%
CGGCGGCATGGTTCATCCAA+AGG - tig0005973:25377-25396 Msa1342630:CDS 60.0%
ATCAGAAAGACGCGCAGCGG+TGG + tig0005973:25553-25572 None:intergenic 60.0%
ACCGCTGCGCGTCTTTCTGA+TGG - tig0005973:25552-25571 Msa1342630:CDS 60.0%
! TGAGGGCTTTGTGGGGTCCA+TGG - tig0005973:26000-26019 Msa1342630:CDS 60.0%
CGAGACTTCTGCCCTTCCAC+AGG + tig0005973:26314-26333 None:intergenic 60.0%
!! TGGGGTTGATAGGAGGGTGG+TGG - tig0005973:26376-26395 Msa1342630:CDS 60.0%
GGCGCCTTGTGTTGCCTTTG+TGG - tig0005973:26451-26470 Msa1342630:CDS 60.0%
GCTTCCTCCTCTTCAACCGG+GGG - tig0005973:26502-26521 Msa1342630:CDS 60.0%
TCACCAAAACTCCCCTCCCC+CGG + tig0005973:26521-26540 None:intergenic 60.0%
GGGGACGTTGTTGCTATCCG+AGG - tig0005973:26752-26771 Msa1342630:CDS 60.0%
CCACGGCAAGACAACGCTCG+CGG - tig0005973:25332-25351 Msa1342630:CDS 65.0%
GCTCGCGGACCAGCTTATCG+CGG - tig0005973:25347-25366 Msa1342630:CDS 65.0%
CAGCTTATCGCGGCCGCTAG+CGG - tig0005973:25357-25376 Msa1342630:CDS 65.0%
CTTGCTGGTGGGACTGCTGC+TGG - tig0005973:25816-25835 Msa1342630:CDS 65.0%
! GCGGTTGATTCCGGAGCGCA+AGG - tig0005973:26340-26359 Msa1342630:CDS 65.0%
GCTCGTGAGGAAGTCGGTGC+TGG - tig0005973:26409-26428 Msa1342630:CDS 65.0%
TCCTCCTCTTCAACCGGGGG+AGG - tig0005973:26505-26524 Msa1342630:CDS 65.0%
CCTCCTCTTCAACCGGGGGA+GGG - tig0005973:26506-26525 Msa1342630:CDS 65.0%
CTCCTCTTCAACCGGGGGAG+GGG - tig0005973:26507-26526 Msa1342630:CDS 65.0%
! CAACCGGGGGAGGGGAGTTT+TGG - tig0005973:26515-26534 Msa1342630:CDS 65.0%
!! GGGGGAGGGGAGTTTTGGTG+AGG - tig0005973:26520-26539 Msa1342630:CDS 65.0%
TGACGCAGTCAGACGGCGGA+AGG - tig0005973:28248-28267 Msa1342630:CDS 65.0%
GACGCAGTCAGACGGCGGAA+GGG - tig0005973:28249-28268 Msa1342630:CDS 65.0%
! CCGCGAGCGTTGTCTTGCCG+TGG + tig0005973:25335-25354 None:intergenic 70.0%
CGCTAGCGGCCGCGATAAGC+TGG + tig0005973:25359-25378 None:intergenic 70.0%
CTTATCGCGGCCGCTAGCGG+CGG - tig0005973:25360-25379 Msa1342630:CDS 70.0%
GCTGGTGGGACTGCTGCTGG+AGG - tig0005973:25819-25838 Msa1342630:CDS 70.0%
CCCTCCCCCGGTTGAAGAGG+AGG + tig0005973:26509-26528 None:intergenic 70.0%
CTCCCCTCCCCCGGTTGAAG+AGG + tig0005973:26512-26531 None:intergenic 70.0%
ACGGCGGAAGGGCCTTCCTG+TGG - tig0005973:28260-28279 Msa1342630:CDS 70.0%
GCGGAAGGGCCTTCCTGTGG+AGG - tig0005973:28263-28282 Msa1342630:CDS 70.0%
! CGCGGCCGCTAGCGGCGGCA+TGG - tig0005973:25365-25384 Msa1342630:CDS 85.0%
Chromosome Type Strat End Strand Name
tig0005973 gene 25261 28338 25261 ID=Msa1342630;Name=Msa1342630
tig0005973 mRNA 25261 28338 25261 ID=Msa1342630-mRNA-1;Parent=Msa1342630;Name=Msa1342630-mRNA-1;_AED=0.00;_eAED=0.00;_QI=0|-1|0|1|-1|1|1|0|1025
tig0005973 exon 25261 28338 25261 ID=Msa1342630-mRNA-1:exon:3677;Parent=Msa1342630-mRNA-1
tig0005973 CDS 25261 28338 25261 ID=Msa1342630-mRNA-1:cds;Parent=Msa1342630-mRNA-1
Gene Sequence

>Msa1342630

ATGGAAGAATTAACTTCCGATAACAACGACCGTAAAAAAATCCGCAACATATGCATCTTGGCACACGTCGACCACGGCAAGACAACGCTCGCGGACCAGCTTATCGCGGCCGCTAGCGGCGGCATGGTTCATCCAAAGGTAGCAGGTAAAGTCCGTTTCATGGATTATCTCGATGAAGAACAACGTCGAGCTATAACAATGAAGAGTTCATCAATTTCGCTTCACTACAATCACCACACTATTAATCTCATAGATTCCCCTGGTCATATTGATTTCTGCGGTGAAGTTTCCACCGCTGCGCGTCTTTCTGATGGTGCGCTTCTTCTTGTTGATGCTGTTGAAGGTGTTCATATTCAAACTCATGCTGTTCTTCGACAATGCTGGACTGAAAAGCTTGAACCGTGTCTTGTGTTGAATAAGATGGATAGGTTGATAACTGAATTGAATCTCACTCCTATGGAAGCGTATACGCGTCTTTTGAGGATTGTTCATGAGGTTAATGGGATTTGGAGTGCTTATAATTCGGAGAAATATTTATCTGATGTGGATGCTCTTCTTGCTGGTGGGACTGCTGCTGGAGGTGAAGTTATGGAGGATTATGATGATGTTGAAGATAAGTTTCAGCCTCAGAAAGGGAATGTTGTGTTTGCTTGTGCCTTGGATGGTTGGGGTTTTGGGATTCATGAATTTGCTGAGATTTATGCTTCAAAGCTTGATGGTGCTAGTGTGGGTGCATTGCTGAGGGCTTTGTGGGGTCCATGGTATTATAATCCAAAGACAAAGATGATTGTTGGAAAGAAAGGGATTAGTGGTGCTAAGGCTAGGCCTATGTTTGTTCAGTTTGTGTTGGAGCCTTTGTGGCAGGTTTATCAAGGAGCACTTGGTGGAGGTAAAGGGATGGTTGAGAAGGTTATTAAGTCTTTTAATTTGCAGATTCCGGTGCGTGAGTTGCAGAATAAGGATTCTAAGGTTGTGCTTCAAGCTGTCATGAGTCGTTGGCTTCCTCTTTCAGATGCCATTTTGTCTATGGTACTGAAGTGTCTTCCGGATCCTGTGGAAGGGCAGAAGTCTCGGATATCGCGGTTGATTCCGGAGCGCAAGGTTGGTTCTGAGAATGGGGTTGATAGGAGGGTGGTGGAAGAGTCTGAGCTCGTGAGGAAGTCGGTGCTGGAGTGTGATTGTAGGGATGAGGCGCCTTGTGTTGCCTTTGTGGCGAAAATGTTTGCTCTTCCTGTTAAAATGCTTCCTCCTCTTCAACCGGGGGAGGGGAGTTTTGGTGAGGAAGGTGAGGGTGAATCTGATGAGTGTTTTTTGGCATTTGCTAGAATATTTAGTGGTGTTTTGTCTGTTGGGCAGAGAGTTTTTGTGATTTCGGCTTTGTATGATCCTTTGAAAGGGGAATCAATGCAAAAGCACATTCAAGAGGCTGAATTGAAATCCATGTATCTGATGATGGGTCAAGGGTTGAAAGCAGTGAAATCTGCAAAAGCAGGGGACGTTGTTGCTATCCGAGGACTTGGGCAGTATATTTTGAAAAGTGCTACACTTTCTTCTACTAGGAATTGTTGGCCTTTTTCGAGTATGGCGTTTCAAGTTGCCCCAATTTTGAGGGTTGCTATTGAGCCATCTGACCCTGCAGATATGGGTGCACTGCTCAAAGGCTTGAGGCTTTTGAATCGAGCAGATCCGTTTGTTGAGGTCACGGTTTCTACTAGAGGAGAACATGTTCTTGCCGCAGCTGGTGAAGTTCATCTTGAGAGATGCATAAAGGATTTGAAGGATAGGTTTGCAAAAGTAAGCTTGGAAGTCTCTCCACCCCTTGTATCCTACAAAGAGACCATTGAGGGAGAGGTATCCAACATGCTGCAAAATTTGAAAGTTCTTAGCAAGAACTTAGATTATGTTGAGAAAACGACGCCCAATGGAAGATGCCTTGTACGCGTGCAGGTGATGAAACTTCTACCTTCTCTCACAAAGGTGCTTGATGAAAGTGCCAATTTACTTGGAGATATCATTGGAATTAAGTCGGAGCAGACAGTTAAAAATTTGGAAATGCAGAGAACAAATATACTCGAAAAGGAGAATCCAGCTGAAGTGATTAAAAAACGTATAATGGATGCAATTGAGAGTGACATTTTGTGTAGGATTGAGAATGATGAAGACCATGCTGAGAAATGTAGATTGAAGTGGCTAAAACTTTTGAGAAGGATATGGGCACTTGGACCGAGTTACATCGGCCCGAACGTTCTTTTCACTCCTGATATTAAAGCAGAAAGTACCGATAGCTCTGTTCTAATACGTGGTTCCTCTCAACTATCTGAAAGGTTGGGTTTTGTTGCTGATTCTGGTAACAGTAACTCGGTTTCAGAGGCATCTTCAAATGAGAGCCAAGTTTTGTATATGGATGCTGAGCGTCTTGAGAGTAATGTTATAACCGGGTTCCAACTAGCAACTTCAGCTGGGCCTTTATGCGATGAACCTATGTGGGGTTTGGCATTTGTCATCGAGGCACGTATATCTCCATCTACAGGGCATCATGATGAATCCGAAACACACCAACAATCCGATCAGTATGGCATCTTTGCAGGGCAGGTTATTGCAACCGTCAAAGATGCTTGTAGGGAAGCTGTGCTAAAGAATAAGCCAAGACTTGTGGAAGCAATGTACTTTTGTGAGTTGAATACCACTACTGAATATTTGGGTCCCATGTATGGTGTACTTTCCCGAAGACGGGCTCGAATTTTGAAAGAAGAGATGCAGGAAGGTTCCCCTTTATTCACTGTGCATGCATATGTTCCTGTTTCTGAGAGTTTTGGTTTTACTGATGAGCTTAGAAGTCGGACTTCTGGCGCCGCAAGTGCACTTCTTGCCCTTAGCCATTGGGAAGCACTACTTGAGGATCCTTTCTTTGTACCTAAAACAGAAGAGGAAATCGAAGAGTTTGGAGATGGTTCCAGCGTTCTTCCAAATACAGCAAGAAAATTGATTGACGCAGTCAGACGGCGGAAGGGCCTTCCTGTGGAGGAAAAAGTAGTACAACATGGAACAAAGCAGAGGACACTCGCTCGTAAAGTTTGA
Protein sequence

>Msa1342630

MEELTSDNNDRKKIRNICILAHVDHGKTTLADQLIAAASGGMVHPKVAGKVRFMDYLDEEQRRAITMKSSSISLHYNHHTINLIDSPGHIDFCGEVSTAARLSDGALLLVDAVEGVHIQTHAVLRQCWTEKLEPCLVLNKMDRLITELNLTPMEAYTRLLRIVHEVNGIWSAYNSEKYLSDVDALLAGGTAAGGEVMEDYDDVEDKFQPQKGNVVFACALDGWGFGIHEFAEIYASKLDGASVGALLRALWGPWYYNPKTKMIVGKKGISGAKARPMFVQFVLEPLWQVYQGALGGGKGMVEKVIKSFNLQIPVRELQNKDSKVVLQAVMSRWLPLSDAILSMVLKCLPDPVEGQKSRISRLIPERKVGSENGVDRRVVEESELVRKSVLECDCRDEAPCVAFVAKMFALPVKMLPPLQPGEGSFGEEGEGESDECFLAFARIFSGVLSVGQRVFVISALYDPLKGESMQKHIQEAELKSMYLMMGQGLKAVKSAKAGDVVAIRGLGQYILKSATLSSTRNCWPFSSMAFQVAPILRVAIEPSDPADMGALLKGLRLLNRADPFVEVTVSTRGEHVLAAAGEVHLERCIKDLKDRFAKVSLEVSPPLVSYKETIEGEVSNMLQNLKVLSKNLDYVEKTTPNGRCLVRVQVMKLLPSLTKVLDESANLLGDIIGIKSEQTVKNLEMQRTNILEKENPAEVIKKRIMDAIESDILCRIENDEDHAEKCRLKWLKLLRRIWALGPSYIGPNVLFTPDIKAESTDSSVLIRGSSQLSERLGFVADSGNSNSVSEASSNESQVLYMDAERLESNVITGFQLATSAGPLCDEPMWGLAFVIEARISPSTGHHDESETHQQSDQYGIFAGQVIATVKDACREAVLKNKPRLVEAMYFCELNTTTEYLGPMYGVLSRRRARILKEEMQEGSPLFTVHAYVPVSESFGFTDELRSRTSGAASALLALSHWEALLEDPFFVPKTEEEIEEFGDGSSVLPNTARKLIDAVRRRKGLPVEEKVVQHGTKQRTLARKV*