Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0971160 | RWR79682.1 | 97.849 | 186 | 4 | 0 | 1 | 186 | 1 | 186 | 3.98e-132 | 378 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0971160 | sp|Q06396|ARF1_ORYSJ | 98.895 | 181 | 2 | 0 | 1 | 181 | 1 | 181 | 2.98e-133 | 373 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0971160 | A0A4D9AID4 | 97.326 | 187 | 5 | 0 | 1 | 187 | 1 | 187 | 1.79e-132 | 379 |
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa0004540 | Msa0971160 | 0.803488 | 3.403346e-49 | -8.615850e-47 |
| Msa0010490 | Msa0971160 | 0.814639 | 1.390619e-51 | -8.615850e-47 |
| Msa0010500 | Msa0971160 | 0.800553 | 1.365321e-48 | -8.615850e-47 |
| Msa0014830 | Msa0971160 | 0.811394 | 7.157358e-51 | -8.615850e-47 |
| Msa0016510 | Msa0971160 | 0.805065 | 1.597904e-49 | -8.615850e-47 |
| Msa0020390 | Msa0971160 | 0.898514 | 4.925488e-77 | -8.615850e-47 |
| Msa0027260 | Msa0971160 | 0.817395 | 3.371732e-52 | -8.615850e-47 |
| Msa0029260 | Msa0971160 | 0.832452 | 9.378104e-56 | -8.615850e-47 |
| Msa0029630 | Msa0971160 | 0.807580 | 4.715404e-50 | -8.615850e-47 |
| Msa0033880 | Msa0971160 | 0.812306 | 4.531289e-51 | -8.615850e-47 |
| Msa0038870 | Msa0971160 | 0.824155 | 9.409496e-54 | -8.615850e-47 |
| Msa0039900 | Msa0971160 | -0.802181 | 6.337411e-49 | -8.615850e-47 |
| Msa0041690 | Msa0971160 | 0.806502 | 7.973811e-50 | -8.615850e-47 |
| Msa0071250 | Msa0971160 | 0.814512 | 1.483471e-51 | -8.615850e-47 |
| Msa0072420 | Msa0971160 | 0.801496 | 8.762003e-49 | -8.615850e-47 |
| Msa0074750 | Msa0971160 | 0.820332 | 7.253295e-53 | -8.615850e-47 |
| Msa0077900 | Msa0971160 | 0.802620 | 5.144710e-49 | -8.615850e-47 |
| Msa0079920 | Msa0971160 | 0.800310 | 1.530207e-48 | -8.615850e-47 |
| Msa0081650 | Msa0971160 | 0.801646 | 8.163459e-49 | -8.615850e-47 |
| Msa0090520 | Msa0971160 | 0.824561 | 7.550208e-54 | -8.615850e-47 |
| Msa0090550 | Msa0971160 | 0.846317 | 2.342962e-59 | -8.615850e-47 |
| Msa0091610 | Msa0971160 | 0.833740 | 4.482115e-56 | -8.615850e-47 |
| Msa0093010 | Msa0971160 | 0.826356 | 2.837341e-54 | -8.615850e-47 |
| Msa0095360 | Msa0971160 | 0.807427 | 5.083037e-50 | -8.615850e-47 |
| Msa0095770 | Msa0971160 | 0.806535 | 7.847971e-50 | -8.615850e-47 |
| Msa0096980 | Msa0971160 | 0.816153 | 6.404808e-52 | -8.615850e-47 |
| Msa0103790 | Msa0971160 | 0.801756 | 7.746993e-49 | -8.615850e-47 |
| Msa0115370 | Msa0971160 | 0.812825 | 3.489481e-51 | -8.615850e-47 |
| Msa0118540 | Msa0971160 | 0.826886 | 2.120390e-54 | -8.615850e-47 |
| Msa0604290 | Msa0971160 | 0.856680 | 2.731064e-62 | -8.615850e-47 |
| Msa0609220 | Msa0971160 | 0.822604 | 2.167159e-53 | -8.615850e-47 |
| Msa0610840 | Msa0971160 | -0.822813 | 1.937482e-53 | -8.615850e-47 |
| Msa0612720 | Msa0971160 | 0.829427 | 5.180193e-55 | -8.615850e-47 |
| Msa0614510 | Msa0971160 | 0.840222 | 9.904972e-58 | -8.615850e-47 |
| Msa0615580 | Msa0971160 | 0.831438 | 1.669197e-55 | -8.615850e-47 |
| Msa0628420 | Msa0971160 | 0.812561 | 3.984387e-51 | -8.615850e-47 |
| Msa0629240 | Msa0971160 | 0.814210 | 1.730040e-51 | -8.615850e-47 |
| Msa0640940 | Msa0971160 | 0.824282 | 8.783766e-54 | -8.615850e-47 |
| Msa0642970 | Msa0971160 | 0.834711 | 2.558657e-56 | -8.615850e-47 |
| Msa0645530 | Msa0971160 | 0.832452 | 9.378104e-56 | -8.615850e-47 |
| Msa0662630 | Msa0971160 | 0.844542 | 7.088392e-59 | -8.615850e-47 |
| Msa0665280 | Msa0971160 | 0.817306 | 3.531681e-52 | -8.615850e-47 |
| Msa0672550 | Msa0971160 | 0.814870 | 1.236117e-51 | -8.615850e-47 |
| Msa0679030 | Msa0971160 | 0.805237 | 1.471116e-49 | -8.615850e-47 |
| Msa0679360 | Msa0971160 | 0.823355 | 1.448474e-53 | -8.615850e-47 |
| Msa0682680 | Msa0971160 | 0.831768 | 1.384194e-55 | -8.615850e-47 |
| Msa0683600 | Msa0971160 | 0.800193 | 1.616251e-48 | -8.615850e-47 |
| Msa0685090 | Msa0971160 | 0.832563 | 8.803213e-56 | -8.615850e-47 |
| Msa0689440 | Msa0971160 | 0.834611 | 2.712366e-56 | -8.615850e-47 |
| Msa0705990 | Msa0971160 | 0.815664 | 8.233415e-52 | -8.615850e-47 |
| Msa0709120 | Msa0971160 | 0.833289 | 5.807649e-56 | -8.615850e-47 |
| Msa0721280 | Msa0971160 | 0.808607 | 2.850756e-50 | -8.615850e-47 |
| Msa0743530 | Msa0971160 | 0.806680 | 7.314498e-50 | -8.615850e-47 |
| Msa0746170 | Msa0971160 | 0.824012 | 1.016188e-53 | -8.615850e-47 |
| Msa0746210 | Msa0971160 | 0.824839 | 6.495466e-54 | -8.615850e-47 |
| Msa0748920 | Msa0971160 | 0.822606 | 2.165547e-53 | -8.615850e-47 |
| Msa0751010 | Msa0971160 | 0.850589 | 1.539678e-60 | -8.615850e-47 |
| Msa0752700 | Msa0971160 | 0.802973 | 4.350581e-49 | -8.615850e-47 |
| Msa0756380 | Msa0971160 | 0.844169 | 8.930704e-59 | -8.615850e-47 |
| Msa0789560 | Msa0971160 | 0.823205 | 1.569837e-53 | -8.615850e-47 |
| Msa0794050 | Msa0971160 | 0.867118 | 1.731377e-65 | -8.615850e-47 |
| Msa0800370 | Msa0971160 | 0.842088 | 3.201034e-58 | -8.615850e-47 |
| Msa0818770 | Msa0971160 | 0.811317 | 7.437560e-51 | -8.615850e-47 |
| Msa0826150 | Msa0971160 | 0.856919 | 2.322132e-62 | -8.615850e-47 |
| Msa0831100 | Msa0971160 | 0.811075 | 8.392173e-51 | -8.615850e-47 |
| Msa0833190 | Msa0971160 | -0.800396 | 1.469722e-48 | -8.615850e-47 |
| Msa0120880 | Msa0971160 | 0.843362 | 1.468561e-58 | -8.615850e-47 |
| Msa0121870 | Msa0971160 | 0.824197 | 9.194086e-54 | -8.615850e-47 |
| Msa0125450 | Msa0971160 | 0.802419 | 5.661123e-49 | -8.615850e-47 |
| Msa0127040 | Msa0971160 | 0.802967 | 4.363639e-49 | -8.615850e-47 |
| Msa0127850 | Msa0971160 | 0.817548 | 3.115476e-52 | -8.615850e-47 |
| Msa0130720 | Msa0971160 | 0.809553 | 1.787470e-50 | -8.615850e-47 |
| Msa0136120 | Msa0971160 | 0.801513 | 8.689395e-49 | -8.615850e-47 |
| Msa0137990 | Msa0971160 | 0.825528 | 4.461833e-54 | -8.615850e-47 |
| Msa0139670 | Msa0971160 | 0.835481 | 1.636595e-56 | -8.615850e-47 |
| Msa0145010 | Msa0971160 | 0.817803 | 2.727747e-52 | -8.615850e-47 |
| Msa0149440 | Msa0971160 | 0.836106 | 1.136733e-56 | -8.615850e-47 |
| Msa0150260 | Msa0971160 | 0.802365 | 5.808429e-49 | -8.615850e-47 |
| Msa0167980 | Msa0971160 | 0.836709 | 7.983026e-57 | -8.615850e-47 |
| Msa0169300 | Msa0971160 | 0.828641 | 8.031152e-55 | -8.615850e-47 |
| Msa0174000 | Msa0971160 | 0.806330 | 8.670554e-50 | -8.615850e-47 |
| Msa0183850 | Msa0971160 | 0.828676 | 7.875055e-55 | -8.615850e-47 |
| Msa0183870 | Msa0971160 | 0.880660 | 4.570585e-70 | -8.615850e-47 |
| Msa0183900 | Msa0971160 | 0.819430 | 1.166180e-52 | -8.615850e-47 |
| Msa0188350 | Msa0971160 | 0.838674 | 2.499428e-57 | -8.615850e-47 |
| Msa0189520 | Msa0971160 | 0.821427 | 4.062157e-53 | -8.615850e-47 |
| Msa0190120 | Msa0971160 | 0.835055 | 2.096154e-56 | -8.615850e-47 |
| Msa0204960 | Msa0971160 | 0.878115 | 3.646149e-69 | -8.615850e-47 |
| Msa0206690 | Msa0971160 | 0.832866 | 7.400241e-56 | -8.615850e-47 |
| Msa0207040 | Msa0971160 | -0.811615 | 6.406433e-51 | -8.615850e-47 |
| Msa0207670 | Msa0971160 | 0.812643 | 3.823466e-51 | -8.615850e-47 |
| Msa0214550 | Msa0971160 | 0.828411 | 9.124874e-55 | -8.615850e-47 |
| Msa0217670 | Msa0971160 | 0.829429 | 5.172899e-55 | -8.615850e-47 |
| Msa0220240 | Msa0971160 | 0.811153 | 8.072454e-51 | -8.615850e-47 |
| Msa0220250 | Msa0971160 | 0.806295 | 8.816690e-50 | -8.615850e-47 |
| Msa0220730 | Msa0971160 | 0.809154 | 2.176490e-50 | -8.615850e-47 |
| Msa0223330 | Msa0971160 | 0.852117 | 5.696672e-61 | -8.615850e-47 |
| Msa0231100 | Msa0971160 | 0.827748 | 1.318186e-54 | -8.615850e-47 |
| Msa0231790 | Msa0971160 | 0.823920 | 1.068420e-53 | -8.615850e-47 |
| Msa0233370 | Msa0971160 | 0.845229 | 4.625709e-59 | -8.615850e-47 |
| Msa0365860 | Msa0971160 | 0.805855 | 1.091020e-49 | -8.615850e-47 |
| Msa0379260 | Msa0971160 | 0.800688 | 1.281376e-48 | -8.615850e-47 |
| Msa0379570 | Msa0971160 | 0.822923 | 1.826894e-53 | -8.615850e-47 |
| Msa0382370 | Msa0971160 | 0.844043 | 9.653301e-59 | -8.615850e-47 |
| Msa0385500 | Msa0971160 | 0.856994 | 2.207932e-62 | -8.615850e-47 |
| Msa0395980 | Msa0971160 | 0.821981 | 3.024067e-53 | -8.615850e-47 |
| Msa0401560 | Msa0971160 | 0.833772 | 4.401964e-56 | -8.615850e-47 |
| Msa0403770 | Msa0971160 | 0.839773 | 1.296448e-57 | -8.615850e-47 |
| Msa0408390 | Msa0971160 | 0.806544 | 7.814428e-50 | -8.615850e-47 |
| Msa0431210 | Msa0971160 | 0.805371 | 1.378698e-49 | -8.615850e-47 |
| Msa0432160 | Msa0971160 | 0.818568 | 1.831854e-52 | -8.615850e-47 |
| Msa0440510 | Msa0971160 | 0.809118 | 2.216061e-50 | -8.615850e-47 |
| Msa0443390 | Msa0971160 | 0.800094 | 1.693338e-48 | -8.615850e-47 |
| Msa0450400 | Msa0971160 | -0.862999 | 3.403970e-64 | -8.615850e-47 |
| Msa0463340 | Msa0971160 | 0.807729 | 4.383725e-50 | -8.615850e-47 |
| Msa0463850 | Msa0971160 | 0.829711 | 4.418472e-55 | -8.615850e-47 |
| Msa0469620 | Msa0971160 | -0.826811 | 2.210396e-54 | -8.615850e-47 |
| Msa0476680 | Msa0971160 | 0.816435 | 5.537376e-52 | -8.615850e-47 |
| Msa0241830 | Msa0971160 | 0.801196 | 1.009213e-48 | -8.615850e-47 |
| Msa0244970 | Msa0971160 | 0.870752 | 1.150722e-66 | -8.615850e-47 |
| Msa0244980 | Msa0971160 | 0.876072 | 1.867066e-68 | -8.615850e-47 |
| Msa0245430 | Msa0971160 | 0.811293 | 7.527029e-51 | -8.615850e-47 |
| Msa0249580 | Msa0971160 | 0.848880 | 4.622954e-60 | -8.615850e-47 |
| Msa0257490 | Msa0971160 | 0.867686 | 1.139300e-65 | -8.615850e-47 |
| Msa0261550 | Msa0971160 | 0.838045 | 3.630154e-57 | -8.615850e-47 |
| Msa0269470 | Msa0971160 | 0.837560 | 4.835948e-57 | -8.615850e-47 |
| Msa0271360 | Msa0971160 | 0.823188 | 1.584611e-53 | -8.615850e-47 |
| Msa0271890 | Msa0971160 | 0.827283 | 1.704069e-54 | -8.615850e-47 |
| Msa0274040 | Msa0971160 | -0.801923 | 7.161344e-49 | -8.615850e-47 |
| Msa0275020 | Msa0971160 | 0.822018 | 2.964392e-53 | -8.615850e-47 |
| Msa0275360 | Msa0971160 | 0.859216 | 4.821781e-63 | -8.615850e-47 |
| Msa0281530 | Msa0971160 | 0.885091 | 1.096116e-71 | -8.615850e-47 |
| Msa0283420 | Msa0971160 | 0.858214 | 9.605212e-63 | -8.615850e-47 |
| Msa0284820 | Msa0971160 | 0.822516 | 2.271893e-53 | -8.615850e-47 |
| Msa0288080 | Msa0971160 | 0.800942 | 1.137616e-48 | -8.615850e-47 |
| Msa0296250 | Msa0971160 | 0.810459 | 1.140518e-50 | -8.615850e-47 |
| Msa0296790 | Msa0971160 | 0.877595 | 5.541780e-69 | -8.615850e-47 |
| Msa0296820 | Msa0971160 | 0.801744 | 7.793241e-49 | -8.615850e-47 |
| Msa0304510 | Msa0971160 | 0.822553 | 2.227825e-53 | -8.615850e-47 |
| Msa0304660 | Msa0971160 | 0.806952 | 6.407531e-50 | -8.615850e-47 |
| Msa0309880 | Msa0971160 | 0.809775 | 1.601851e-50 | -8.615850e-47 |
| Msa0310860 | Msa0971160 | 0.831585 | 1.535391e-55 | -8.615850e-47 |
| Msa0311720 | Msa0971160 | 0.800482 | 1.411850e-48 | -8.615850e-47 |
| Msa0315940 | Msa0971160 | 0.817858 | 2.651833e-52 | -8.615850e-47 |
| Msa0317960 | Msa0971160 | 0.805378 | 1.374086e-49 | -8.615850e-47 |
| Msa0317970 | Msa0971160 | 0.811356 | 7.293834e-51 | -8.615850e-47 |
| Msa0318470 | Msa0971160 | 0.817607 | 3.021214e-52 | -8.615850e-47 |
| Msa0320590 | Msa0971160 | 0.855628 | 5.551483e-62 | -8.615850e-47 |
| Msa0321690 | Msa0971160 | 0.865242 | 6.806907e-65 | -8.615850e-47 |
| Msa0322900 | Msa0971160 | 0.831691 | 1.445919e-55 | -8.615850e-47 |
| Msa0326480 | Msa0971160 | 0.823371 | 1.435770e-53 | -8.615850e-47 |
| Msa0331700 | Msa0971160 | 0.804731 | 1.876308e-49 | -8.615850e-47 |
| Msa0335060 | Msa0971160 | 0.803627 | 3.185597e-49 | -8.615850e-47 |
| Msa0339910 | Msa0971160 | 0.813039 | 3.132141e-51 | -8.615850e-47 |
| Msa0343850 | Msa0971160 | 0.819588 | 1.073633e-52 | -8.615850e-47 |
| Msa0357900 | Msa0971160 | 0.822257 | 2.610010e-53 | -8.615850e-47 |
| Msa0358860 | Msa0971160 | 0.816854 | 4.462605e-52 | -8.615850e-47 |
| Msa0363060 | Msa0971160 | 0.817880 | 2.621283e-52 | -8.615850e-47 |
| Msa0482940 | Msa0971160 | 0.842788 | 2.087370e-58 | -8.615850e-47 |
| Msa0484740 | Msa0971160 | 0.836019 | 1.195963e-56 | -8.615850e-47 |
| Msa0491000 | Msa0971160 | 0.824663 | 7.142977e-54 | -8.615850e-47 |
| Msa0496450 | Msa0971160 | 0.874197 | 8.151820e-68 | -8.615850e-47 |
| Msa0510840 | Msa0971160 | 0.810867 | 9.308575e-51 | -8.615850e-47 |
| Msa0511770 | Msa0971160 | 0.814629 | 1.397681e-51 | -8.615850e-47 |
| Msa0520270 | Msa0971160 | 0.807369 | 5.228885e-50 | -8.615850e-47 |
| Msa0521010 | Msa0971160 | 0.823864 | 1.101103e-53 | -8.615850e-47 |
| Msa0524600 | Msa0971160 | 0.800401 | 1.466254e-48 | -8.615850e-47 |
| Msa0527020 | Msa0971160 | 0.805021 | 1.632192e-49 | -8.615850e-47 |
| Msa0527740 | Msa0971160 | 0.802696 | 4.963299e-49 | -8.615850e-47 |
| Msa0531250 | Msa0971160 | 0.815236 | 1.024966e-51 | -8.615850e-47 |
| Msa0531650 | Msa0971160 | 0.805733 | 1.157811e-49 | -8.615850e-47 |
| Msa0534900 | Msa0971160 | 0.820711 | 5.936635e-53 | -8.615850e-47 |
| Msa0542290 | Msa0971160 | 0.843080 | 1.745456e-58 | -8.615850e-47 |
| Msa0542560 | Msa0971160 | 0.861520 | 9.683479e-64 | -8.615850e-47 |
| Msa0547160 | Msa0971160 | 0.806602 | 7.597496e-50 | -8.615850e-47 |
| Msa0547990 | Msa0971160 | 0.808671 | 2.762067e-50 | -8.615850e-47 |
| Msa0555640 | Msa0971160 | 0.813760 | 2.174361e-51 | -8.615850e-47 |
| Msa0556060 | Msa0971160 | 0.803236 | 3.837963e-49 | -8.615850e-47 |
| Msa0560500 | Msa0971160 | 0.821216 | 4.542162e-53 | -8.615850e-47 |
| Msa0580230 | Msa0971160 | 0.805770 | 1.136846e-49 | -8.615850e-47 |
| Msa0581110 | Msa0971160 | 0.813953 | 1.971451e-51 | -8.615850e-47 |
| Msa0588260 | Msa0971160 | 0.842049 | 3.278060e-58 | -8.615850e-47 |
| Msa0600080 | Msa0971160 | 0.865088 | 7.606814e-65 | -8.615850e-47 |
| Msa0600450 | Msa0971160 | 0.814248 | 1.697253e-51 | -8.615850e-47 |
| Msa0844110 | Msa0971160 | 0.810855 | 9.367187e-51 | -8.615850e-47 |
| Msa0844280 | Msa0971160 | 0.819799 | 9.604645e-53 | -8.615850e-47 |
| Msa0861470 | Msa0971160 | 0.801648 | 8.153752e-49 | -8.615850e-47 |
| Msa0861500 | Msa0971160 | 0.826506 | 2.613364e-54 | -8.615850e-47 |
| Msa0861570 | Msa0971160 | 0.806015 | 1.010046e-49 | -8.615850e-47 |
| Msa0877710 | Msa0971160 | 0.801280 | 9.698720e-49 | -8.615850e-47 |
| Msa0879850 | Msa0971160 | 0.803347 | 3.640418e-49 | -8.615850e-47 |
| Msa0880810 | Msa0971160 | 0.805562 | 1.257126e-49 | -8.615850e-47 |
| Msa0892640 | Msa0971160 | 0.847135 | 1.400721e-59 | -8.615850e-47 |
| Msa0897200 | Msa0971160 | 0.823512 | 1.331181e-53 | -8.615850e-47 |
| Msa0918390 | Msa0971160 | 0.801870 | 7.343703e-49 | -8.615850e-47 |
| Msa0923780 | Msa0971160 | 0.828421 | 9.076955e-55 | -8.615850e-47 |
| Msa0933380 | Msa0971160 | 0.982360 | 6.816701e-155 | -8.615850e-47 |
| Msa0934140 | Msa0971160 | 0.801020 | 1.096251e-48 | -8.615850e-47 |
| Msa0944200 | Msa0971160 | 0.840466 | 8.550592e-58 | -8.615850e-47 |
| Msa0958000 | Msa0971160 | 0.862231 | 5.868986e-64 | -8.615850e-47 |
| Msa0969370 | Msa0971160 | 0.806578 | 7.686367e-50 | -8.615850e-47 |
| Msa0970530 | Msa0971160 | 0.809767 | 1.608305e-50 | -8.615850e-47 |
| Msa0970600 | Msa0971160 | 0.815569 | 8.644709e-52 | -8.615850e-47 |
| Msa0971160 | Msa0974950 | 0.856010 | 4.294365e-62 | -8.615850e-47 |
| Msa0971160 | Msa0980540 | 0.800003 | 1.766753e-48 | -8.615850e-47 |
| Msa0971160 | Msa0994370 | 0.850162 | 2.028866e-60 | -8.615850e-47 |
| Msa0971160 | Msa0997430 | 0.819384 | 1.194915e-52 | -8.615850e-47 |
| Msa0971160 | Msa1027250 | 0.827878 | 1.226848e-54 | -8.615850e-47 |
| Msa0971160 | Msa1027300 | 0.831375 | 1.729836e-55 | -8.615850e-47 |
| Msa0971160 | Msa1027360 | 0.834084 | 3.676662e-56 | -8.615850e-47 |
| Msa0971160 | Msa1029050 | 0.800211 | 1.602957e-48 | -8.615850e-47 |
| Msa0971160 | Msa1033720 | 0.808405 | 3.147512e-50 | -8.615850e-47 |
| Msa0971160 | Msa1037520 | 0.834660 | 2.636325e-56 | -8.615850e-47 |
| Msa0971160 | Msa1042660 | 0.835322 | 1.794917e-56 | -8.615850e-47 |
| Msa0971160 | Msa1071320 | 0.811341 | 7.349141e-51 | -8.615850e-47 |
| Msa0971160 | Msa1072900 | 0.825112 | 5.598754e-54 | -8.615850e-47 |
| Msa0971160 | Msa1073590 | 0.808736 | 2.674477e-50 | -8.615850e-47 |
| Msa0971160 | Msa1081790 | -0.801921 | 7.165612e-49 | -8.615850e-47 |
| Msa0971160 | Msa1089320 | 0.809560 | 1.781387e-50 | -8.615850e-47 |
| Msa0971160 | Msa1089450 | 0.816171 | 6.345393e-52 | -8.615850e-47 |
| Msa0971160 | Msa1123350 | 0.826685 | 2.368868e-54 | -8.615850e-47 |
| Msa0971160 | Msa1126830 | 0.811304 | 7.484517e-51 | -8.615850e-47 |
| Msa0971160 | Msa1127430 | 0.806929 | 6.478662e-50 | -8.615850e-47 |
| Msa0971160 | Msa1127590 | 0.812723 | 3.673629e-51 | -8.615850e-47 |
| Msa0971160 | Msa1128990 | 0.801914 | 7.190414e-49 | -8.615850e-47 |
| Msa0971160 | Msa1130400 | 0.847287 | 1.272194e-59 | -8.615850e-47 |
| Msa0971160 | Msa1132310 | 0.808123 | 3.614924e-50 | -8.615850e-47 |
| Msa0971160 | Msa1140150 | 0.827519 | 1.495977e-54 | -8.615850e-47 |
| Msa0971160 | Msa1165780 | 0.842341 | 2.743252e-58 | -8.615850e-47 |
| Msa0971160 | Msa1200320 | 0.823209 | 1.566867e-53 | -8.615850e-47 |
| Msa0971160 | Msa1201640 | 0.815491 | 8.997730e-52 | -8.615850e-47 |
| Msa0971160 | Msa1201810 | 0.832376 | 9.795862e-56 | -8.615850e-47 |
| Msa0971160 | Msa1202580 | 0.818674 | 1.733057e-52 | -8.615850e-47 |
| Msa0971160 | Msa1205480 | 0.827966 | 1.168373e-54 | -8.615850e-47 |
| Msa0971160 | Msa1205590 | 0.823696 | 1.205239e-53 | -8.615850e-47 |
| Msa0971160 | Msa1206270 | 0.835776 | 1.378321e-56 | -8.615850e-47 |
| Msa0971160 | Msa1206290 | 0.813200 | 2.887059e-51 | -8.615850e-47 |
| Msa0971160 | Msa1211830 | 0.818177 | 2.245583e-52 | -8.615850e-47 |
| Msa0971160 | Msa1218580 | 0.805737 | 1.155130e-49 | -8.615850e-47 |
| Msa0971160 | Msa1233850 | 0.805743 | 1.152183e-49 | -8.615850e-47 |
| Msa0971160 | Msa1234620 | 0.809104 | 2.231255e-50 | -8.615850e-47 |
| Msa0971160 | Msa1248830 | 0.807393 | 5.168149e-50 | -8.615850e-47 |
| Msa0971160 | Msa1254560 | 0.806283 | 8.868825e-50 | -8.615850e-47 |
| Msa0971160 | Msa1254620 | 0.810746 | 9.886544e-51 | -8.615850e-47 |
| Msa0971160 | Msa1254730 | 0.817827 | 2.694011e-52 | -8.615850e-47 |
| Msa0971160 | Msa1256470 | 0.811059 | 8.461018e-51 | -8.615850e-47 |
| Msa0971160 | Msa1256810 | 0.808149 | 3.568339e-50 | -8.615850e-47 |
| Msa0971160 | Msa1259640 | 0.802996 | 4.303892e-49 | -8.615850e-47 |
| Msa0971160 | Msa1262890 | 0.860951 | 1.443588e-63 | -8.615850e-47 |
| Msa0971160 | Msa1265590 | 0.819991 | 8.683762e-53 | -8.615850e-47 |
| Msa0971160 | Msa1271130 | 0.838113 | 3.486899e-57 | -8.615850e-47 |
| Msa0971160 | Msa1296830 | 0.835859 | 1.313062e-56 | -8.615850e-47 |
| Msa0971160 | Msa1297530 | 0.802016 | 6.852390e-49 | -8.615850e-47 |
| Msa0971160 | Msa1299700 | 0.809891 | 1.511979e-50 | -8.615850e-47 |
| Msa0971160 | Msa1303580 | 0.807864 | 4.104978e-50 | -8.615850e-47 |
| Msa0971160 | Msa1304810 | 0.822697 | 2.061626e-53 | -8.615850e-47 |
| Msa0971160 | Msa1307180 | 0.815712 | 8.030957e-52 | -8.615850e-47 |
| Msa0971160 | Msa1310800 | -0.807632 | 4.597854e-50 | -8.615850e-47 |
| Msa0971160 | Msa1316360 | 0.822082 | 2.865786e-53 | -8.615850e-47 |
| Msa0971160 | Msa1329790 | 0.804125 | 2.509398e-49 | -8.615850e-47 |
| Msa0971160 | Msa1332220 | 0.806416 | 8.313950e-50 | -8.615850e-47 |
| Msa0971160 | Msa1332590 | 0.803652 | 3.147457e-49 | -8.615850e-47 |
| Msa0971160 | Msa1336040 | 0.812197 | 4.784768e-51 | -8.615850e-47 |
| Msa0971160 | Msa1336560 | 0.837483 | 5.060302e-57 | -8.615850e-47 |
| Msa0971160 | Msa1337170 | 0.806795 | 6.914695e-50 | -8.615850e-47 |
| Msa0971160 | Msa1342630 | 0.843243 | 1.579952e-58 | -8.615850e-47 |
| Msa0971160 | Msa1344310 | 0.815252 | 1.017070e-51 | -8.615850e-47 |
| Msa0971160 | Msa1351540 | 0.851848 | 6.793266e-61 | -8.615850e-47 |
| Msa0971160 | Msa1357890 | 0.811745 | 6.004883e-51 | -8.615850e-47 |
| Msa0971160 | Msa1359270 | 0.816057 | 6.729496e-52 | -8.615850e-47 |
| Msa0971160 | Msa1362420 | 0.832787 | 7.744754e-56 | -8.615850e-47 |
| Msa0971160 | Msa1364210 | 0.810502 | 1.116490e-50 | -8.615850e-47 |
| Msa0971160 | Msa1370590 | 0.837612 | 4.690707e-57 | -8.615850e-47 |
| Msa0971160 | Msa1376650 | 0.836204 | 1.073265e-56 | -8.615850e-47 |
| Msa0971160 | Msa1381350 | 0.808683 | 2.745005e-50 | -8.615850e-47 |
| Msa0971160 | Msa1381650 | 0.830317 | 3.143433e-55 | -8.615850e-47 |
| Msa0971160 | Msa1382020 | 0.801523 | 8.647935e-49 | -8.615850e-47 |
| Msa0971160 | Msa1384100 | 0.841156 | 5.636810e-58 | -8.615850e-47 |
| Msa0971160 | Msa1384710 | 0.801908 | 7.212726e-49 | -8.615850e-47 |
| Msa0971160 | Msa1398090 | 0.811450 | 6.959401e-51 | -8.615850e-47 |
| Msa0971160 | Msa1407970 | 0.823245 | 1.536401e-53 | -8.615850e-47 |
| Msa0971160 | Msa1411950 | 0.820034 | 8.490033e-53 | -8.615850e-47 |
| Msa0971160 | Msa1422810 | 0.825175 | 5.409911e-54 | -8.615850e-47 |
| Msa0971160 | Msa1428780 | 0.820443 | 6.839997e-53 | -8.615850e-47 |
| Msa0971160 | Msa1433600 | 0.827492 | 1.518322e-54 | -8.615850e-47 |
| Msa0971160 | Msa1434090 | 0.800206 | 1.606744e-48 | -8.615850e-47 |
| Msa0971160 | Msa1436600 | 0.800878 | 1.172022e-48 | -8.615850e-47 |
| Msa0971160 | Msa1440190 | 0.805696 | 1.178439e-49 | -8.615850e-47 |
| Msa0971160 | Msa1444120 | 0.844893 | 5.701757e-59 | -8.615850e-47 |
| Msa0971160 | Msa1446080 | 0.846477 | 2.119088e-59 | -8.615850e-47 |
| Msa0971160 | Msa1447180 | 0.801119 | 1.046400e-48 | -8.615850e-47 |
| Msa0971160 | Msa1447890 | 0.813643 | 2.306940e-51 | -8.615850e-47 |
| Msa0971160 | Msa1449750 | 0.807675 | 4.502572e-50 | -8.615850e-47 |
| Msa0971160 | Msa1450720 | 0.819435 | 1.162961e-52 | -8.615850e-47 |
| Msa0971160 | Msa1454680 | 0.870275 | 1.650707e-66 | -8.615850e-47 |
| Msa0971160 | Msa1454870 | 0.804739 | 1.869504e-49 | -8.615850e-47 |
| Msa0971160 | Msa1454960 | 0.819973 | 8.765844e-53 | -8.615850e-47 |
| Msa0971160 | Msa1457220 | 0.823167 | 1.602136e-53 | -8.615850e-47 |
| Msa0971160 | Msa1458090 | 0.835905 | 1.277823e-56 | -8.615850e-47 |
| Msa0971160 | Msa1458810 | 0.804657 | 1.944536e-49 | -8.615850e-47 |
| Msa0971160 | Msa1459960 | 0.814166 | 1.769659e-51 | -8.615850e-47 |
| Msa0971160 | Msa1460320 | -0.830107 | 3.538031e-55 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0971160 | MtrunA17_Chr6g0450081 | 99.448 | 181 | 1 | 0 | 1 | 181 | 1 | 181 | 6.49e-135 | 374 |
| Msa0971160 | MtrunA17_Chr7g0270301 | 99.444 | 180 | 1 | 0 | 1 | 180 | 1 | 180 | 1.86e-134 | 373 |
| Msa0971160 | MtrunA17_Chr5g0413451 | 98.895 | 181 | 2 | 0 | 1 | 181 | 1 | 181 | 2.99e-134 | 373 |
| Msa0971160 | MtrunA17_Chr5g0413441 | 98.895 | 181 | 2 | 0 | 1 | 181 | 1 | 181 | 2.99e-134 | 373 |
| Msa0971160 | MtrunA17_Chr1g0194261 | 98.343 | 181 | 3 | 0 | 1 | 181 | 1 | 181 | 8.10e-134 | 372 |
| Msa0971160 | MtrunA17_Chr5g0401761 | 86.188 | 181 | 25 | 0 | 1 | 181 | 1 | 181 | 3.80e-120 | 337 |
| Msa0971160 | MtrunA17_Chr4g0072861 | 63.128 | 179 | 66 | 0 | 1 | 179 | 1 | 179 | 9.00e-85 | 248 |
| Msa0971160 | MtrunA17_Chr5g0395631 | 61.582 | 177 | 68 | 0 | 1 | 177 | 1 | 177 | 3.35e-83 | 244 |
| Msa0971160 | MtrunA17_Chr4g0039591 | 60.452 | 177 | 70 | 0 | 1 | 177 | 1 | 177 | 1.84e-80 | 237 |
| Msa0971160 | MtrunA17_Chr5g0395641 | 55.495 | 182 | 79 | 1 | 1 | 180 | 1 | 182 | 1.77e-75 | 224 |
| Msa0971160 | MtrunA17_Chr1g0188111 | 51.667 | 180 | 87 | 0 | 1 | 180 | 1 | 180 | 6.04e-67 | 202 |
| Msa0971160 | MtrunA17_Chr8g0373271 | 48.795 | 166 | 82 | 3 | 18 | 181 | 17 | 181 | 8.93e-51 | 162 |
| Msa0971160 | MtrunA17_Chr2g0287721 | 34.831 | 178 | 105 | 2 | 5 | 173 | 5 | 180 | 4.46e-37 | 127 |
| Msa0971160 | MtrunA17_Chr5g0434561 | 34.091 | 176 | 113 | 2 | 1 | 173 | 1 | 176 | 9.06e-31 | 110 |
| Msa0971160 | MtrunA17_Chr5g0395651 | 63.291 | 79 | 27 | 1 | 1 | 77 | 1 | 79 | 1.53e-30 | 107 |
| Msa0971160 | MtrunA17_Chr5g0401071 | 32.787 | 183 | 120 | 2 | 1 | 180 | 1 | 183 | 2.99e-30 | 109 |
| Msa0971160 | MtrunA17_Chr4g0012371 | 31.707 | 164 | 111 | 1 | 18 | 180 | 1 | 164 | 2.01e-26 | 99.0 |
| Msa0971160 | MtrunA17_Chr2g0294701 | 31.638 | 177 | 105 | 2 | 15 | 177 | 18 | 192 | 1.04e-24 | 95.5 |
| Msa0971160 | MtrunA17_Chr7g0271761 | 31.073 | 177 | 106 | 2 | 15 | 177 | 18 | 192 | 3.12e-24 | 94.0 |
| Msa0971160 | MtrunA17_Chr4g0068171 | 31.638 | 177 | 105 | 2 | 15 | 177 | 18 | 192 | 8.19e-23 | 90.5 |
| Msa0971160 | MtrunA17_Chr5g0395671 | 51.020 | 49 | 24 | 0 | 132 | 180 | 44 | 92 | 1.15e-12 | 61.2 |
| Msa0971160 | MtrunA17_Chr1g0180291 | 34.118 | 85 | 52 | 1 | 18 | 98 | 15 | 99 | 2.65e-11 | 60.1 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0971160 | AT5G14670.1 | 98.895 | 181 | 2 | 0 | 1 | 181 | 1 | 181 | 9.35e-134 | 372 |
| Msa0971160 | AT1G10630.1 | 98.343 | 181 | 3 | 0 | 1 | 181 | 1 | 181 | 1.26e-133 | 372 |
| Msa0971160 | AT1G10630.2 | 98.343 | 181 | 3 | 0 | 1 | 181 | 1 | 181 | 1.26e-133 | 372 |
| Msa0971160 | AT5G14670.2 | 98.343 | 181 | 3 | 0 | 1 | 181 | 1 | 181 | 1.72e-133 | 371 |
| Msa0971160 | AT5G14670.3 | 98.343 | 181 | 3 | 0 | 1 | 181 | 1 | 181 | 1.72e-133 | 371 |
| Msa0971160 | AT2G47170.2 | 98.343 | 181 | 3 | 0 | 1 | 181 | 1 | 181 | 3.35e-133 | 370 |
| Msa0971160 | AT2G47170.1 | 98.343 | 181 | 3 | 0 | 1 | 181 | 1 | 181 | 3.35e-133 | 370 |
| Msa0971160 | AT2G47170.3 | 98.343 | 181 | 3 | 0 | 1 | 181 | 1 | 181 | 3.35e-133 | 370 |
| Msa0971160 | AT1G23490.1 | 97.790 | 181 | 4 | 0 | 1 | 181 | 1 | 181 | 9.10e-133 | 369 |
| Msa0971160 | AT1G70490.2 | 97.790 | 181 | 4 | 0 | 1 | 181 | 1 | 181 | 9.10e-133 | 369 |
| Msa0971160 | AT1G70490.7 | 97.790 | 181 | 4 | 0 | 1 | 181 | 1 | 181 | 9.10e-133 | 369 |
| Msa0971160 | AT1G70490.4 | 97.790 | 181 | 4 | 0 | 1 | 181 | 1 | 181 | 9.10e-133 | 369 |
| Msa0971160 | AT1G70490.3 | 97.790 | 181 | 4 | 0 | 1 | 181 | 1 | 181 | 9.10e-133 | 369 |
| Msa0971160 | AT1G70490.1 | 97.790 | 181 | 4 | 0 | 1 | 181 | 1 | 181 | 9.10e-133 | 369 |
| Msa0971160 | AT1G70490.6 | 97.790 | 181 | 4 | 0 | 1 | 181 | 1 | 181 | 9.10e-133 | 369 |
| Msa0971160 | AT1G70490.5 | 97.790 | 181 | 4 | 0 | 1 | 181 | 1 | 181 | 9.10e-133 | 369 |
| Msa0971160 | AT3G62290.3 | 97.238 | 181 | 5 | 0 | 1 | 181 | 1 | 181 | 4.67e-132 | 367 |
| Msa0971160 | AT3G62290.1 | 97.238 | 181 | 5 | 0 | 1 | 181 | 1 | 181 | 4.67e-132 | 367 |
| Msa0971160 | AT3G62290.2 | 97.238 | 181 | 5 | 0 | 1 | 181 | 1 | 181 | 4.67e-132 | 367 |
| Msa0971160 | AT2G15310.1 | 67.222 | 180 | 59 | 0 | 1 | 180 | 1 | 180 | 2.28e-90 | 263 |
| Msa0971160 | AT2G24765.1 | 62.011 | 179 | 68 | 0 | 1 | 179 | 1 | 179 | 3.77e-85 | 249 |
| Msa0971160 | AT5G17060.2 | 59.322 | 177 | 72 | 0 | 1 | 177 | 1 | 177 | 3.99e-81 | 239 |
| Msa0971160 | AT5G17060.1 | 59.322 | 177 | 72 | 0 | 1 | 177 | 1 | 177 | 3.99e-81 | 239 |
| Msa0971160 | AT3G03120.1 | 60.452 | 177 | 70 | 0 | 1 | 177 | 1 | 177 | 4.70e-81 | 239 |
| Msa0971160 | AT3G22950.1 | 52.778 | 180 | 85 | 0 | 1 | 180 | 1 | 180 | 5.49e-70 | 211 |
| Msa0971160 | AT3G22950.2 | 52.778 | 180 | 85 | 0 | 1 | 180 | 1 | 180 | 5.49e-70 | 211 |
| Msa0971160 | AT2G24765.2 | 64.844 | 128 | 45 | 0 | 1 | 128 | 1 | 128 | 1.29e-60 | 185 |
| Msa0971160 | AT3G03120.2 | 63.077 | 130 | 48 | 0 | 1 | 130 | 1 | 130 | 5.71e-60 | 184 |
| Msa0971160 | AT1G02430.1 | 48.936 | 188 | 82 | 5 | 1 | 176 | 1 | 186 | 9.29e-57 | 177 |
| Msa0971160 | AT1G02440.1 | 46.237 | 186 | 90 | 4 | 1 | 176 | 1 | 186 | 6.40e-56 | 175 |
| Msa0971160 | AT2G18390.1 | 48.795 | 166 | 82 | 3 | 18 | 181 | 17 | 181 | 5.66e-50 | 160 |
| Msa0971160 | AT1G02430.2 | 47.205 | 161 | 75 | 4 | 1 | 153 | 1 | 159 | 4.55e-45 | 147 |
| Msa0971160 | AT5G52210.1 | 34.091 | 176 | 109 | 1 | 5 | 173 | 5 | 180 | 9.16e-36 | 124 |
| Msa0971160 | AT5G52210.2 | 34.091 | 176 | 109 | 1 | 5 | 173 | 5 | 180 | 9.16e-36 | 124 |
| Msa0971160 | AT3G49870.1 | 33.880 | 183 | 118 | 2 | 1 | 180 | 1 | 183 | 1.24e-32 | 115 |
| Msa0971160 | AT5G67560.1 | 33.742 | 163 | 107 | 1 | 12 | 173 | 14 | 176 | 3.26e-31 | 112 |
| Msa0971160 | AT5G37680.1 | 32.955 | 176 | 115 | 2 | 1 | 173 | 1 | 176 | 6.63e-30 | 108 |
| Msa0971160 | AT3G49870.2 | 32.927 | 164 | 109 | 1 | 18 | 180 | 1 | 164 | 2.27e-29 | 107 |
| Msa0971160 | AT3G49860.1 | 33.133 | 166 | 110 | 1 | 16 | 180 | 10 | 175 | 9.92e-29 | 105 |
| Msa0971160 | AT1G02440.2 | 33.766 | 154 | 66 | 3 | 1 | 153 | 1 | 119 | 1.10e-26 | 98.6 |
| Msa0971160 | AT1G09180.1 | 32.961 | 179 | 104 | 2 | 13 | 177 | 16 | 192 | 4.36e-25 | 96.7 |
| Msa0971160 | AT3G62560.1 | 31.638 | 177 | 105 | 2 | 15 | 177 | 18 | 192 | 1.78e-24 | 95.1 |
| Msa0971160 | AT4G02080.1 | 31.073 | 177 | 106 | 2 | 15 | 177 | 18 | 192 | 6.46e-24 | 93.6 |
| Msa0971160 | AT5G37680.2 | 32.812 | 128 | 86 | 0 | 46 | 173 | 2 | 129 | 6.68e-24 | 92.0 |
| Msa0971160 | AT1G56330.1 | 31.638 | 177 | 105 | 2 | 15 | 177 | 18 | 192 | 6.82e-24 | 93.6 |
Find 49 sgRNAs with CRISPR-Local
Find 239 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| CAGAGCACTTGTGCAACTTC+TGG | 0.283751 | 6_4:-2812578 | Msa0971160:CDS |
| AAATAAGACCCTGAGTGTTC+TGG | 0.332007 | 6_4:+2813571 | None:intergenic |
| GCTTCACCGTGTGGGATGTC+GGG | 0.356155 | 6_4:-2814162 | Msa0971160:CDS |
| CAGTAGGTTGTTTGCGAAGA+AGG | 0.366217 | 6_4:-2816416 | Msa0971160:CDS |
| AGAGGGTCTTTACGAGGGTT+TGG | 0.373805 | 6_4:-2812555 | Msa0971160:CDS |
| TCTGCAGCATTCATTGCATT+TGG | 0.388382 | 6_4:+2812847 | None:intergenic |
| AGCTTCACCGTGTGGGATGT+CGG | 0.397098 | 6_4:-2814163 | Msa0971160:CDS |
| GCGATTTGTGTAGGTGAAGA+TGG | 0.448083 | 6_4:-2816461 | Msa0971160:exon |
| CGATTTGTGTAGGTGAAGAT+GGG | 0.477607 | 6_4:-2816460 | Msa0971160:exon |
| ATTCTCTCCGCCAACGCCAC+TGG | 0.484693 | 6_4:-2812801 | Msa0971160:intron |
| CTTCACCGTGTGGGATGTCG+GGG | 0.486668 | 6_4:-2814161 | Msa0971160:CDS |
| GGAAGTAATGCCTCCACAAT+GGG | 0.487329 | 6_4:+2813592 | None:intergenic |
| TTCTAACAACATTGCAAGCA+AGG | 0.487356 | 6_4:-2812525 | Msa0971160:CDS |
| CGATAGAGACCGAGTGGTTG+AGG | 0.489067 | 6_4:-2813532 | Msa0971160:CDS |
| ATTTGGAAGATCTTGTTTGT+TGG | 0.492492 | 6_4:+2812864 | None:intergenic |
| CTTCATACCAGTGGCGTTGG+CGG | 0.492667 | 6_4:+2812794 | None:intergenic |
| AGACCGAGTGGTTGAGGCAA+GGG | 0.502924 | 6_4:-2813526 | Msa0971160:CDS |
| AAATGAGAATGTTTATGATA+CGG | 0.510550 | 6_4:+2816913 | None:intergenic |
| GTCTTTACGAGGGTTTGGAC+TGG | 0.530184 | 6_4:-2812550 | Msa0971160:CDS |
| CGTTCACGAAGCTGTTCAGT+AGG | 0.541353 | 6_4:-2816432 | Msa0971160:CDS |
| GTTACTACCATCCCTACCAT+TGG | 0.542784 | 6_4:-2816316 | Msa0971160:intron |
| ATGGTAGGTCTCGATGCGGC+TGG | 0.552532 | 6_4:-2816379 | Msa0971160:CDS |
| GCAGAAATAACTGACAAACT+TGG | 0.552853 | 6_4:-2812829 | Msa0971160:CDS |
| ATCTGCAGATTCGCCCATTG+TGG | 0.557688 | 6_4:-2813605 | Msa0971160:intron |
| CATCCCTTGCCTCAACCACT+CGG | 0.565995 | 6_4:+2813523 | None:intergenic |
| GATCTTCATACCAGTGGCGT+TGG | 0.567883 | 6_4:+2812791 | None:intergenic |
| GAATTGAACTAACCAATGGT+AGG | 0.570340 | 6_4:+2816304 | None:intergenic |
| TTCTGGAGAGGGTCTTTACG+AGG | 0.571595 | 6_4:-2812561 | Msa0971160:CDS |
| AATTGAACTAACCAATGGTA+GGG | 0.580228 | 6_4:+2816305 | None:intergenic |
| GCTGATGTTCTTGTACTCCA+CGG | 0.581443 | 6_4:+2814183 | None:intergenic |
| GAACTAACCAATGGTAGGGA+TGG | 0.581870 | 6_4:+2816309 | None:intergenic |
| TGCAGATTCGCCCATTGTGG+AGG | 0.584506 | 6_4:-2813602 | Msa0971160:intron |
| AGGCAAGGGATGAATTGCAC+AGG | 0.586704 | 6_4:-2813512 | Msa0971160:CDS |
| TGGAAGTAATGCCTCCACAA+TGG | 0.593003 | 6_4:+2813591 | None:intergenic |
| GAGACCGAGTGGTTGAGGCA+AGG | 0.594397 | 6_4:-2813527 | Msa0971160:CDS |
| CACTTGTGCAACTTCTGGAG+AGG | 0.598038 | 6_4:-2812573 | Msa0971160:CDS |
| ACTTGTGCAACTTCTGGAGA+GGG | 0.603681 | 6_4:-2812572 | Msa0971160:CDS |
| TGGATCTCAGCGATTTGTGT+AGG | 0.607269 | 6_4:-2816470 | Msa0971160:intron |
| GCATTACTTCCAGAACACTC+AGG | 0.609319 | 6_4:-2813580 | Msa0971160:CDS |
| AGGATTTAATGTTGAAACCG+TGG | 0.626322 | 6_4:-2814200 | Msa0971160:CDS |
| GAACATCAGCTTCACCGTGT+GGG | 0.628419 | 6_4:-2814170 | Msa0971160:CDS |
| CATTACTTCCAGAACACTCA+GGG | 0.632210 | 6_4:-2813579 | Msa0971160:CDS |
| TCTGGAGAGGGTCTTTACGA+GGG | 0.640167 | 6_4:-2812560 | Msa0971160:CDS |
| TTCACCGTGTGGGATGTCGG+GGG | 0.658294 | 6_4:-2814160 | Msa0971160:CDS |
| AGAACATCAGCTTCACCGTG+TGG | 0.663793 | 6_4:-2814171 | Msa0971160:CDS |
| GATTTGTGTAGGTGAAGATG+GGG | 0.682756 | 6_4:-2816459 | Msa0971160:exon |
| ATTGCACAGGATGTTGAATG+AGG | 0.696400 | 6_4:-2813499 | Msa0971160:intron |
| TTTGATGGTAGGTCTCGATG+CGG | 0.707868 | 6_4:-2816383 | Msa0971160:CDS |
| TAGCAACGATAGAGACCGAG+TGG | 0.728607 | 6_4:-2813538 | Msa0971160:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | ATCATGATAATTAAAATAAT+TGG | - | chr6_4:2813382-2813401 | Msa0971160:intron | 10.0% |
| !!! | AATGATTAGTTATTAATAAA+TGG | - | chr6_4:2814793-2814812 | Msa0971160:intron | 10.0% |
| !! | GTATATATCTATATAATAAT+TGG | - | chr6_4:2815203-2815222 | Msa0971160:intron | 10.0% |
| !!! | ACAAAATATAATATTTTTAG+AGG | + | chr6_4:2816066-2816085 | None:intergenic | 10.0% |
| !!! | AAATATTATATTTTGTTTTC+GGG | - | chr6_4:2816070-2816089 | Msa0971160:intron | 10.0% |
| !! | TTACTATTATACATAATTAA+AGG | - | chr6_4:2816440-2816459 | Msa0971160:CDS | 10.0% |
| !! | TAAAAATCAATATTGAGAAA+GGG | + | chr6_4:2813164-2813183 | None:intergenic | 15.0% |
| !! | ATCTACATAATTATAACATA+AGG | + | chr6_4:2813293-2813312 | None:intergenic | 15.0% |
| !!! | TCACATCATATTTAATTTAA+TGG | + | chr6_4:2813500-2813519 | None:intergenic | 15.0% |
| !!! | TTTAAATATCTAAAACAAAC+AGG | + | chr6_4:2813614-2813633 | None:intergenic | 15.0% |
| !! | TATTAATAACTAATCATTAG+TGG | + | chr6_4:2814791-2814810 | None:intergenic | 15.0% |
| !!! | ACATTTTTTTCAATATAATG+AGG | - | chr6_4:2815800-2815819 | Msa0971160:intron | 15.0% |
| !!! | CATTTTTTTCAATATAATGA+GGG | - | chr6_4:2815801-2815820 | Msa0971160:intron | 15.0% |
| !!! | AATATTATATTTTGTTTTCG+GGG | - | chr6_4:2816071-2816090 | Msa0971160:intron | 15.0% |
| !! | ATATTGGAAATATATAATGT+TGG | - | chr6_4:2816491-2816510 | Msa0971160:intron | 15.0% |
| !! | AAATGAGAATGTTTATGATA+CGG | + | chr6_4:2812533-2812552 | None:intergenic | 20.0% |
| !!! | GATTGAATTGATGAATTTTT+TGG | - | chr6_4:2812911-2812930 | Msa0971160:intron | 20.0% |
| !!! | ATTTTGATGATTGATGATTA+TGG | - | chr6_4:2812944-2812963 | Msa0971160:intron | 20.0% |
| !!! | ATTTTGTATAAATTGAAGCT+TGG | - | chr6_4:2813097-2813116 | Msa0971160:intron | 20.0% |
| !! | GTAAAAATCAATATTGAGAA+AGG | + | chr6_4:2813165-2813184 | None:intergenic | 20.0% |
| !!! | ATCTCAATGATAAATTTTAC+AGG | + | chr6_4:2813327-2813346 | None:intergenic | 20.0% |
| !! | ATAATTAAAATAATTGGTCG+TGG | - | chr6_4:2813388-2813407 | Msa0971160:intron | 20.0% |
| !! | CATAACTAAAACATCAAAAT+TGG | + | chr6_4:2813639-2813658 | None:intergenic | 20.0% |
| !! | AAATGAGATGTAAAATAGTT+AGG | - | chr6_4:2813894-2813913 | Msa0971160:intron | 20.0% |
| !!! | TAAAATAGTTAGGCATATTT+TGG | - | chr6_4:2813904-2813923 | Msa0971160:intron | 20.0% |
| !!! | AGAACAATAAATTTTTCAAC+TGG | - | chr6_4:2813982-2814001 | Msa0971160:intron | 20.0% |
| !!! | GAACAATAAATTTTTCAACT+GGG | - | chr6_4:2813983-2814002 | Msa0971160:intron | 20.0% |
| !!! | TATTTATGCATGTTTGTTAA+AGG | - | chr6_4:2814033-2814052 | Msa0971160:intron | 20.0% |
| !! | ATATATTAATCCATTATGCA+GGG | + | chr6_4:2814102-2814121 | None:intergenic | 20.0% |
| !! | ATACTATAACATCTTCTAAA+TGG | + | chr6_4:2814159-2814178 | None:intergenic | 20.0% |
| !! | ATAAAACCAAGTTGTATAAA+CGG | + | chr6_4:2814819-2814838 | None:intergenic | 20.0% |
| !!! | TATACAACTTGGTTTTATTA+TGG | - | chr6_4:2814821-2814840 | Msa0971160:intron | 20.0% |
| !! | TATTATGGTAATAAAACTAC+TGG | - | chr6_4:2814836-2814855 | Msa0971160:intron | 20.0% |
| !! | GTTAAAATTCAGAAATTTGA+AGG | + | chr6_4:2814902-2814921 | None:intergenic | 20.0% |
| !! | TAAAGTTGTTAGATAAAGAT+CGG | + | chr6_4:2814970-2814989 | None:intergenic | 20.0% |
| !!! | TATTTATTCTTGTTTGTTTC+TGG | - | chr6_4:2815337-2815356 | Msa0971160:intron | 20.0% |
| !!! | TATTCCATTACAATGTTTTT+TGG | - | chr6_4:2815771-2815790 | Msa0971160:intron | 20.0% |
| !!! | ATTCCATTACAATGTTTTTT+GGG | - | chr6_4:2815772-2815791 | Msa0971160:intron | 20.0% |
| !!! | ATATTATATTTTGTTTTCGG+GGG | - | chr6_4:2816072-2816091 | Msa0971160:intron | 20.0% |
| !!! | ATTATTTTTGCTAGTTTTCT+GGG | + | chr6_4:2816191-2816210 | None:intergenic | 20.0% |
| !!! | AATTATTTTTGCTAGTTTTC+TGG | + | chr6_4:2816192-2816211 | None:intergenic | 20.0% |
| !!! | TTTTATTGTAGGTTTGTTTT+TGG | - | chr6_4:2816304-2816323 | Msa0971160:intron | 20.0% |
| !! | AAAATGCTAAATCATAATTG+AGG | + | chr6_4:2816739-2816758 | None:intergenic | 20.0% |
| !!! | ATTATGATTTAGCATTTTCT+TGG | - | chr6_4:2816741-2816760 | Msa0971160:intron | 20.0% |
| !!! | TTATGATTTAGCATTTTCTT+GGG | - | chr6_4:2816742-2816761 | Msa0971160:intron | 20.0% |
| ! | AACAAAATATTCCCACTTAT+AGG | - | chr6_4:2813348-2813367 | Msa0971160:intron | 25.0% |
| ! | AGCATAAGATATTCTCAAAT+TGG | - | chr6_4:2813725-2813744 | Msa0971160:intron | 25.0% |
| ! | TATATTAATCCATTATGCAG+GGG | + | chr6_4:2814101-2814120 | None:intergenic | 25.0% |
| ! | CATATATTAATCCATTATGC+AGG | + | chr6_4:2814103-2814122 | None:intergenic | 25.0% |
| !! | ATGGATTAATATATGAAAGC+TGG | - | chr6_4:2814108-2814127 | Msa0971160:intron | 25.0% |
| !!! | TTCCATTTTAAAGATTGTGT+TGG | - | chr6_4:2814732-2814751 | Msa0971160:intron | 25.0% |
| !!! | TCCATTTTAAAGATTGTGTT+GGG | - | chr6_4:2814733-2814752 | Msa0971160:intron | 25.0% |
| !! | TCACAATTTCTAGATTTCAA+TGG | + | chr6_4:2815093-2815112 | None:intergenic | 25.0% |
| ! | GAAATCTAGAAATTGTGAAT+TGG | - | chr6_4:2815095-2815114 | Msa0971160:intron | 25.0% |
| ! | AATGTACATATGTCATCTTA+TGG | - | chr6_4:2815178-2815197 | Msa0971160:intron | 25.0% |
| !!! | TGGAACAATTTTTTATCTAC+AGG | - | chr6_4:2815223-2815242 | Msa0971160:intron | 25.0% |
| ! | TATACAAGCTTCTATAATGT+GGG | - | chr6_4:2815428-2815447 | Msa0971160:intron | 25.0% |
| ! | TATAAAAGAGGTAGGTAAAA+AGG | - | chr6_4:2815515-2815534 | Msa0971160:intron | 25.0% |
| ! | ATAAAAGAGGTAGGTAAAAA+GGG | - | chr6_4:2815516-2815535 | Msa0971160:intron | 25.0% |
| ! | AAACCCAAAAAACATTGTAA+TGG | + | chr6_4:2815778-2815797 | None:intergenic | 25.0% |
| ! | TCATACAAGATAAACAACAA+AGG | + | chr6_4:2815994-2816013 | None:intergenic | 25.0% |
| !! | ATCAACCAAGATTTTATTGT+AGG | - | chr6_4:2816293-2816312 | Msa0971160:intron | 25.0% |
| ! | ACAAACCTACAATAAAATCT+TGG | + | chr6_4:2816301-2816320 | None:intergenic | 25.0% |
| !!! | TTTGTTTTTGGTGTTCTTAA+TGG | - | chr6_4:2816316-2816335 | Msa0971160:intron | 25.0% |
| ! | TATGAATAAACAACAAGAGA+CGG | + | chr6_4:2816343-2816362 | None:intergenic | 25.0% |
| !! | AGTGATAGTCTTAAGTATAT+TGG | - | chr6_4:2816475-2816494 | Msa0971160:intron | 25.0% |
| ! | TCAAGTCATTGCATTAAAAA+TGG | + | chr6_4:2816828-2816847 | None:intergenic | 25.0% |
| ! | TCTTCTTATTGAATCGCTTT+TGG | - | chr6_4:2812747-2812766 | Msa0971160:intron | 30.0% |
| ! | ATTGATGATTATGGATCTTG+TGG | - | chr6_4:2812953-2812972 | Msa0971160:intron | 30.0% |
| AATTGAACTAACCAATGGTA+GGG | + | chr6_4:2813141-2813160 | None:intergenic | 30.0% | |
| TTAGTAACGATCCTATAAGT+GGG | + | chr6_4:2813362-2813381 | None:intergenic | 30.0% | |
| TTTAGTAACGATCCTATAAG+TGG | + | chr6_4:2813363-2813382 | None:intergenic | 30.0% | |
| AATAATTGGTCGTGGTATTA+AGG | - | chr6_4:2813396-2813415 | Msa0971160:intron | 30.0% | |
| TGGTATTAAGGCAAATTCTA+TGG | - | chr6_4:2813408-2813427 | Msa0971160:intron | 30.0% | |
| CACAAATTTATTTCCACCAT+TGG | - | chr6_4:2813460-2813479 | Msa0971160:intron | 30.0% | |
| GATGTGACTTTATGATCAAA+TGG | - | chr6_4:2813513-2813532 | Msa0971160:CDS | 30.0% | |
| AAACAAACAGGCCTTTAATA+CGG | + | chr6_4:2813602-2813621 | None:intergenic | 30.0% | |
| CGTGTAAGATATTCTCAAAT+TGG | - | chr6_4:2813663-2813682 | Msa0971160:intron | 30.0% | |
| ! | TCTCATTTTGTTACTAGCAA+TGG | + | chr6_4:2813882-2813901 | None:intergenic | 30.0% |
| !! | TTCTTGCTGTCTCTTTTAAT+AGG | + | chr6_4:2813966-2813985 | None:intergenic | 30.0% |
| !!! | AATTTGACCCATTTTTCAAG+AGG | - | chr6_4:2814073-2814092 | Msa0971160:intron | 30.0% |
| !!! | ATTTGACCCATTTTTCAAGA+GGG | - | chr6_4:2814074-2814093 | Msa0971160:intron | 30.0% |
| GTTTGAATAGGAAAAGAAGA+TGG | + | chr6_4:2814371-2814390 | None:intergenic | 30.0% | |
| !! | GTAAAGAAAATGGGTATTGA+TGG | + | chr6_4:2814408-2814427 | None:intergenic | 30.0% |
| AAGTTGGCAGTAAAGAAAAT+GGG | + | chr6_4:2814417-2814436 | None:intergenic | 30.0% | |
| ! | TAAGTTGGCAGTAAAGAAAA+TGG | + | chr6_4:2814418-2814437 | None:intergenic | 30.0% |
| CTTCTAACACTATGAATTCT+TGG | + | chr6_4:2814465-2814484 | None:intergenic | 30.0% | |
| !! | TTGTACATGGTTTTACAATG+TGG | - | chr6_4:2814581-2814600 | Msa0971160:intron | 30.0% |
| TCCTAAAGATCATTGATCTA+CGG | + | chr6_4:2814666-2814685 | None:intergenic | 30.0% | |
| !! | CCATTTTAAAGATTGTGTTG+GGG | - | chr6_4:2814734-2814753 | Msa0971160:intron | 30.0% |
| TTTGAAGGATCTTTATCTCA+AGG | + | chr6_4:2814887-2814906 | None:intergenic | 30.0% | |
| TGTATTCAAAACGTGAACTT+AGG | - | chr6_4:2814932-2814951 | Msa0971160:intron | 30.0% | |
| !!! | TGTGTTTTTTGTTTGCGTTT+CGG | - | chr6_4:2815040-2815059 | Msa0971160:intron | 30.0% |
| TACATTAGAAACACAATGTG+TGG | + | chr6_4:2815164-2815183 | None:intergenic | 30.0% | |
| CTATACAAGCTTCTATAATG+TGG | - | chr6_4:2815427-2815446 | Msa0971160:intron | 30.0% | |
| ! | ACACTGTCACTTAATAATAG+TGG | + | chr6_4:2815491-2815510 | None:intergenic | 30.0% |
| TAAAAGAGGTAGGTAAAAAG+GGG | - | chr6_4:2815517-2815536 | Msa0971160:intron | 30.0% | |
| ATACCAAAAATGAAACGATG+TGG | + | chr6_4:2815645-2815664 | None:intergenic | 30.0% | |
| TTCGAACATCGATCAAAATA+AGG | + | chr6_4:2815679-2815698 | None:intergenic | 30.0% | |
| ! | CATTGTAATGGAATACACAT+GGG | + | chr6_4:2815766-2815785 | None:intergenic | 30.0% |
| ! | ACATTGTAATGGAATACACA+TGG | + | chr6_4:2815767-2815786 | None:intergenic | 30.0% |
| TAGCAACTCTATAGACTTAA+TGG | - | chr6_4:2816237-2816256 | Msa0971160:intron | 30.0% | |
| AGCAACTCTATAGACTTAAT+GGG | - | chr6_4:2816238-2816257 | Msa0971160:intron | 30.0% | |
| ! | ATAGACTTAATGGGTGTAAT+TGG | - | chr6_4:2816247-2816266 | Msa0971160:intron | 30.0% |
| ATGAATAAACAACAAGAGAC+GGG | + | chr6_4:2816342-2816361 | None:intergenic | 30.0% | |
| ATTCATAGTTTCACACCATA+TGG | - | chr6_4:2816356-2816375 | Msa0971160:CDS | 30.0% | |
| ! | ATTTGGAAGATCTTGTTTGT+TGG | + | chr6_4:2816582-2816601 | None:intergenic | 30.0% |
| GCAATGACTTGATTTATTTC+AGG | - | chr6_4:2816836-2816855 | Msa0971160:five_prime_UTR | 30.0% | |
| CTCAGATCGAAGAAAAAAAG+AGG | - | chr6_4:2812635-2812654 | Msa0971160:intron | 35.0% | |
| ! | GAAGGAGATGAGAATTTTGA+TGG | - | chr6_4:2813045-2813064 | Msa0971160:intron | 35.0% |
| !! | GAGATGAGAATTTTGATGGT+AGG | - | chr6_4:2813049-2813068 | Msa0971160:intron | 35.0% |
| GAATTGAACTAACCAATGGT+AGG | + | chr6_4:2813142-2813161 | None:intergenic | 35.0% | |
| AAGGGAATTGAACTAACCAA+TGG | + | chr6_4:2813146-2813165 | None:intergenic | 35.0% | |
| TGTTTGTGCATGTTAGACAA+AGG | - | chr6_4:2813576-2813595 | Msa0971160:CDS | 35.0% | |
| TTAGACAAAGGCCGTATTAA+AGG | - | chr6_4:2813588-2813607 | Msa0971160:CDS | 35.0% | |
| AATTAATCCCTGCTCTTGTA+TGG | + | chr6_4:2813851-2813870 | None:intergenic | 35.0% | |
| ! | GCAATATGTCTTTTCTCTGT+TGG | + | chr6_4:2814295-2814314 | None:intergenic | 35.0% |
| GATTCAACGAGAGTTTGAAT+AGG | + | chr6_4:2814383-2814402 | None:intergenic | 35.0% | |
| TCCGTAGATCAATGATCTTT+AGG | - | chr6_4:2814662-2814681 | Msa0971160:intron | 35.0% | |
| ! | CCCCAACACAATCTTTAAAA+TGG | + | chr6_4:2814737-2814756 | None:intergenic | 35.0% |
| AAATGGCCGTTTATACAACT+TGG | - | chr6_4:2814810-2814829 | Msa0971160:intron | 35.0% | |
| TGATACTTGTGCAATCATTG+CGG | + | chr6_4:2815002-2815021 | None:intergenic | 35.0% | |
| !!! | GTGTTTTTTGTTTGCGTTTC+GGG | - | chr6_4:2815041-2815060 | Msa0971160:intron | 35.0% |
| AGGATTTAATGTTGAAACCG+TGG | - | chr6_4:2815243-2815262 | Msa0971160:intron | 35.0% | |
| GACAGTGTGAAGTATAAAAG+AGG | - | chr6_4:2815503-2815522 | Msa0971160:intron | 35.0% | |
| GTGTGAAGTATAAAAGAGGT+AGG | - | chr6_4:2815507-2815526 | Msa0971160:intron | 35.0% | |
| AAAAGAGGTAGGTAAAAAGG+GGG | - | chr6_4:2815518-2815537 | Msa0971160:intron | 35.0% | |
| !! | GTACATAAGACTTGCTGAAA+AGG | + | chr6_4:2815713-2815732 | None:intergenic | 35.0% |
| TTATGTACTGTGTATGACTG+TGG | - | chr6_4:2815725-2815744 | Msa0971160:intron | 35.0% | |
| CATGTAAAAGTGAACTACGA+AGG | + | chr6_4:2816033-2816052 | None:intergenic | 35.0% | |
| !!! | ATGCTTGACAACACCTTTTT+TGG | - | chr6_4:2816123-2816142 | Msa0971160:intron | 35.0% |
| !!! | TGCTTGACAACACCTTTTTT+GGG | - | chr6_4:2816124-2816143 | Msa0971160:intron | 35.0% |
| CTGATTATATCCCCCAAAAA+AGG | + | chr6_4:2816139-2816158 | None:intergenic | 35.0% | |
| AGTCTATAGAGTTGCTATCA+AGG | + | chr6_4:2816234-2816253 | None:intergenic | 35.0% | |
| ACAAAACTGTGCAAACCATA+TGG | + | chr6_4:2816374-2816393 | None:intergenic | 35.0% | |
| AACAAACATCAGCAGAGAAA+AGG | + | chr6_4:2816397-2816416 | None:intergenic | 35.0% | |
| ATAATGTTGGTATGTGAACC+TGG | - | chr6_4:2816504-2816523 | Msa0971160:intron | 35.0% | |
| GCAGAAATAACTGACAAACT+TGG | - | chr6_4:2816614-2816633 | Msa0971160:intron | 35.0% | |
| ! | GAAGATCTGATCTTTTGCTT+TGG | - | chr6_4:2816668-2816687 | Msa0971160:intron | 35.0% |
| TTCTAACAACATTGCAAGCA+AGG | - | chr6_4:2816918-2816937 | Msa0971160:five_prime_UTR | 35.0% | |
| CGATTTGTGTAGGTGAAGAT+GGG | - | chr6_4:2812983-2813002 | Msa0971160:intron | 40.0% | |
| GATTTGTGTAGGTGAAGATG+GGG | - | chr6_4:2812984-2813003 | Msa0971160:intron | 40.0% | |
| GAGATTCATTGATCCAATGG+TGG | + | chr6_4:2813476-2813495 | None:intergenic | 40.0% | |
| GGTGAGATTCATTGATCCAA+TGG | + | chr6_4:2813479-2813498 | None:intergenic | 40.0% | |
| AAGTTTGCCATACAAGAGCA+GGG | - | chr6_4:2813841-2813860 | Msa0971160:intron | 40.0% | |
| ! | TCAACTGGGTCTTGTGTTTA+TGG | - | chr6_4:2813997-2814016 | Msa0971160:intron | 40.0% |
| ! | CAACTGGGTCTTGTGTTTAT+GGG | - | chr6_4:2813998-2814017 | Msa0971160:intron | 40.0% |
| CAGATATGGTTGGACTGTAA+TGG | + | chr6_4:2814317-2814336 | None:intergenic | 40.0% | |
| TCCAACCATATCTGTTACAG+AGG | - | chr6_4:2814323-2814342 | Msa0971160:intron | 40.0% | |
| ACCTCTGTAACAGATATGGT+TGG | + | chr6_4:2814327-2814346 | None:intergenic | 40.0% | |
| AGAGGTGAGCCATTATATCA+CGG | - | chr6_4:2814341-2814360 | Msa0971160:intron | 40.0% | |
| GAATAGGAAAAGAAGATGGC+CGG | + | chr6_4:2814367-2814386 | None:intergenic | 40.0% | |
| TTTACTGCCAACTTACGTGT+CGG | - | chr6_4:2814423-2814442 | Msa0971160:intron | 40.0% | |
| ! | ATTTTAGACACCAGCTGAAC+TGG | - | chr6_4:2814553-2814572 | Msa0971160:intron | 40.0% |
| ! | TTTTAGACACCAGCTGAACT+GGG | - | chr6_4:2814554-2814573 | Msa0971160:intron | 40.0% |
| TGAACTGGGTATCTTGTACA+TGG | - | chr6_4:2814568-2814587 | Msa0971160:intron | 40.0% | |
| ! | ATCCTTGAACATGTGTTGCT+AGG | - | chr6_4:2814608-2814627 | Msa0971160:intron | 40.0% |
| GTGAACTTAGGAATGTCAGT+TGG | - | chr6_4:2814944-2814963 | Msa0971160:intron | 40.0% | |
| TCACATAACACACAACATGC+AGG | + | chr6_4:2815463-2815482 | None:intergenic | 40.0% | |
| ! | TCGCCACATCGTTTCATTTT+TGG | - | chr6_4:2815639-2815658 | Msa0971160:intron | 40.0% |
| CATTACTTCCAGAACACTCA+GGG | - | chr6_4:2815864-2815883 | Msa0971160:intron | 40.0% | |
| AAATAAGACCCTGAGTGTTC+TGG | + | chr6_4:2815875-2815894 | None:intergenic | 40.0% | |
| !!! | CACTCAGGGTCTTATTTTTG+TGG | - | chr6_4:2815878-2815897 | Msa0971160:intron | 40.0% |
| ATTGCACAGGATGTTGAATG+AGG | - | chr6_4:2815944-2815963 | Msa0971160:intron | 40.0% | |
| !!! | GCTTGACAACACCTTTTTTG+GGG | - | chr6_4:2816125-2816144 | Msa0971160:intron | 40.0% |
| !!! | CTTGACAACACCTTTTTTGG+GGG | - | chr6_4:2816126-2816145 | Msa0971160:intron | 40.0% |
| CTGAAACAAAATGACCATCC+AGG | + | chr6_4:2816525-2816544 | None:intergenic | 40.0% | |
| !! | CTGGATGGTCATTTTGTTTC+AGG | - | chr6_4:2816523-2816542 | Msa0971160:intron | 40.0% |
| TCTGCAGCATTCATTGCATT+TGG | + | chr6_4:2816599-2816618 | None:intergenic | 40.0% | |
| AGATCAGATCTTCATACCAG+TGG | + | chr6_4:2816661-2816680 | None:intergenic | 40.0% | |
| TGGATCTCAGCGATTTGTGT+AGG | - | chr6_4:2812973-2812992 | Msa0971160:intron | 45.0% | |
| GCGATTTGTGTAGGTGAAGA+TGG | - | chr6_4:2812982-2813001 | Msa0971160:intron | 45.0% | |
| CAGTAGGTTGTTTGCGAAGA+AGG | - | chr6_4:2813027-2813046 | Msa0971160:intron | 45.0% | |
| ! | TTTGATGGTAGGTCTCGATG+CGG | - | chr6_4:2813060-2813079 | Msa0971160:intron | 45.0% |
| GTTACTACCATCCCTACCAT+TGG | - | chr6_4:2813127-2813146 | Msa0971160:intron | 45.0% | |
| GAACTAACCAATGGTAGGGA+TGG | + | chr6_4:2813137-2813156 | None:intergenic | 45.0% | |
| TGTCGTGTCAATGTCATGTC+AGG | - | chr6_4:2813202-2813221 | Msa0971160:intron | 45.0% | |
| AACAAAGACACCACCTGACA+CGG | + | chr6_4:2813249-2813268 | None:intergenic | 45.0% | |
| CAAGTTTGCCATACAAGAGC+AGG | - | chr6_4:2813840-2813859 | Msa0971160:intron | 45.0% | |
| AGGGGACCCTCTTGAAAAAT+GGG | + | chr6_4:2814083-2814102 | None:intergenic | 45.0% | |
| GCTCACCTCTGTAACAGATA+TGG | + | chr6_4:2814331-2814350 | None:intergenic | 45.0% | |
| TTACTGCCAACTTACGTGTC+GGG | - | chr6_4:2814424-2814443 | Msa0971160:intron | 45.0% | |
| TACAAGATACCCAGTTCAGC+TGG | + | chr6_4:2814566-2814585 | None:intergenic | 45.0% | |
| CTCCTAGCAACACATGTTCA+AGG | + | chr6_4:2814613-2814632 | None:intergenic | 45.0% | |
| !! | GAGAGTGTTGAAGAGAGTGA+TGG | - | chr6_4:2814630-2814649 | Msa0971160:intron | 45.0% |
| ! | AGTGTTGAAGAGAGTGATGG+TGG | - | chr6_4:2814633-2814652 | Msa0971160:intron | 45.0% |
| TTGTGTTGGGGTTTCATGAC+AGG | - | chr6_4:2814746-2814765 | Msa0971160:intron | 45.0% | |
| GCTGATGTTCTTGTACTCCA+CGG | + | chr6_4:2815263-2815282 | None:intergenic | 45.0% | |
| GAGCTAGTAGAGGTCATGAA+TGG | - | chr6_4:2815367-2815386 | Msa0971160:intron | 45.0% | |
| ! | GACTGTGGTGTTTTGCTTAC+TGG | - | chr6_4:2815740-2815759 | Msa0971160:intron | 45.0% |
| GGAAGTAATGCCTCCACAAT+GGG | + | chr6_4:2815854-2815873 | None:intergenic | 45.0% | |
| TGGAAGTAATGCCTCCACAA+TGG | + | chr6_4:2815855-2815874 | None:intergenic | 45.0% | |
| GCATTACTTCCAGAACACTC+AGG | - | chr6_4:2815863-2815882 | Msa0971160:intron | 45.0% | |
| TGTTGGTATGTGAACCTGGA+TGG | - | chr6_4:2816508-2816527 | Msa0971160:intron | 45.0% | |
| GTTTGCACATGCATGTCTCT+AGG | + | chr6_4:2816803-2816822 | None:intergenic | 45.0% | |
| ! | ACTTGTGCAACTTCTGGAGA+GGG | - | chr6_4:2816871-2816890 | Msa0971160:five_prime_UTR | 45.0% |
| !!! | AAAATATTATATTTTGTTTT+CGG | - | chr6_4:2816069-2816088 | Msa0971160:intron | 5.0% |
| CGTTCACGAAGCTGTTCAGT+AGG | - | chr6_4:2813011-2813030 | Msa0971160:intron | 50.0% | |
| TCATGTCAAGTGTCCGTGTC+AGG | - | chr6_4:2813233-2813252 | Msa0971160:intron | 50.0% | |
| ! | CTGGGTCTTGTGTTTATGGG+CGG | - | chr6_4:2814001-2814020 | Msa0971160:intron | 50.0% |
| CAGGGGACCCTCTTGAAAAA+TGG | + | chr6_4:2814084-2814103 | None:intergenic | 50.0% | |
| GTGAGCCATTATATCACGGC+CGG | - | chr6_4:2814345-2814364 | Msa0971160:intron | 50.0% | |
| CAAGTTCCCGACACGTAAGT+TGG | + | chr6_4:2814433-2814452 | None:intergenic | 50.0% | |
| AGAACATCAGCTTCACCGTG+TGG | - | chr6_4:2815272-2815291 | Msa0971160:intron | 50.0% | |
| GAACATCAGCTTCACCGTGT+GGG | - | chr6_4:2815273-2815292 | Msa0971160:intron | 50.0% | |
| TGGTGACAGAGAGCTAGTAG+AGG | - | chr6_4:2815357-2815376 | Msa0971160:intron | 50.0% | |
| AGGTAGGTAAAAAGGGGGAG+AGG | - | chr6_4:2815523-2815542 | Msa0971160:intron | 50.0% | |
| ACAATGGGCGAATCTGCAGA+TGG | + | chr6_4:2815839-2815858 | None:intergenic | 50.0% | |
| ATCTGCAGATTCGCCCATTG+TGG | - | chr6_4:2815838-2815857 | Msa0971160:intron | 50.0% | |
| TAGCAACGATAGAGACCGAG+TGG | - | chr6_4:2815905-2815924 | Msa0971160:intron | 50.0% | |
| AGGCAAGGGATGAATTGCAC+AGG | - | chr6_4:2815931-2815950 | Msa0971160:intron | 50.0% | |
| GATCTTCATACCAGTGGCGT+TGG | + | chr6_4:2816655-2816674 | None:intergenic | 50.0% | |
| ! | CAGAGCACTTGTGCAACTTC+TGG | - | chr6_4:2816865-2816884 | Msa0971160:five_prime_UTR | 50.0% |
| ! | CACTTGTGCAACTTCTGGAG+AGG | - | chr6_4:2816870-2816889 | Msa0971160:five_prime_UTR | 50.0% |
| ! | TTCTGGAGAGGGTCTTTACG+AGG | - | chr6_4:2816882-2816901 | Msa0971160:five_prime_UTR | 50.0% |
| TCTGGAGAGGGTCTTTACGA+GGG | - | chr6_4:2816883-2816902 | Msa0971160:five_prime_UTR | 50.0% | |
| AGAGGGTCTTTACGAGGGTT+TGG | - | chr6_4:2816888-2816907 | Msa0971160:five_prime_UTR | 50.0% | |
| GTCTTTACGAGGGTTTGGAC+TGG | - | chr6_4:2816893-2816912 | Msa0971160:five_prime_UTR | 50.0% | |
| TGTCAAGTGTCCGTGTCAGG+TGG | - | chr6_4:2813236-2813255 | Msa0971160:intron | 55.0% | |
| CTTGTGTTTATGGGCGGCGA+AGG | - | chr6_4:2814007-2814026 | Msa0971160:intron | 55.0% | |
| CAAGAGGGTCCCCTGCATAA+TGG | - | chr6_4:2814089-2814108 | Msa0971160:intron | 55.0% | |
| GATGGCCGGCCGTGATATAA+TGG | + | chr6_4:2814353-2814372 | None:intergenic | 55.0% | |
| AGCTTCACCGTGTGGGATGT+CGG | - | chr6_4:2815280-2815299 | Msa0971160:intron | 55.0% | |
| AAAAGGGGGAGAGGAGTGAG+TGG | - | chr6_4:2815532-2815551 | Msa0971160:intron | 55.0% | |
| AAAGGGGGAGAGGAGTGAGT+GGG | - | chr6_4:2815533-2815552 | Msa0971160:intron | 55.0% | |
| TGCAGATTCGCCCATTGTGG+AGG | - | chr6_4:2815841-2815860 | Msa0971160:intron | 55.0% | |
| CGATAGAGACCGAGTGGTTG+AGG | - | chr6_4:2815911-2815930 | Msa0971160:intron | 55.0% | |
| AGACCGAGTGGTTGAGGCAA+GGG | - | chr6_4:2815917-2815936 | Msa0971160:intron | 55.0% | |
| CATCCCTTGCCTCAACCACT+CGG | + | chr6_4:2815923-2815942 | None:intergenic | 55.0% | |
| ! | CTTCATACCAGTGGCGTTGG+CGG | + | chr6_4:2816652-2816671 | None:intergenic | 55.0% |
| ATGGTAGGTCTCGATGCGGC+TGG | - | chr6_4:2813064-2813083 | Msa0971160:intron | 60.0% | |
| GCTTCACCGTGTGGGATGTC+GGG | - | chr6_4:2815281-2815300 | Msa0971160:intron | 60.0% | |
| CTTCACCGTGTGGGATGTCG+GGG | - | chr6_4:2815282-2815301 | Msa0971160:intron | 60.0% | |
| TTCACCGTGTGGGATGTCGG+GGG | - | chr6_4:2815283-2815302 | Msa0971160:intron | 60.0% | |
| GAGACCGAGTGGTTGAGGCA+AGG | - | chr6_4:2815916-2815935 | Msa0971160:intron | 60.0% | |
| ATTCTCTCCGCCAACGCCAC+TGG | - | chr6_4:2816642-2816661 | Msa0971160:intron | 60.0% | |
| CTGACCCCCGACATCCCACA+CGG | + | chr6_4:2815290-2815309 | None:intergenic | 65.0% | |
| GGATGTCGGGGGTCAGGACA+AGG | - | chr6_4:2815294-2815313 | Msa0971160:intron | 65.0% | |
| CGTGTGGGATGTCGGGGGTC+AGG | - | chr6_4:2815288-2815307 | Msa0971160:intron | 70.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr6_4 | gene | 2812499 | 2816966 | 2812499 | ID=Msa0971160;Name=Msa0971160 |
| chr6_4 | mRNA | 2812499 | 2816966 | 2812499 | ID=Msa0971160-mRNA-1;Parent=Msa0971160;Name=Msa0971160-mRNA-1;_AED=0.23;_eAED=0.23;_QI=176|1|0.83|1|0.8|0.66|6|0|188 |
| chr6_4 | exon | 2812499 | 2812607 | 2812499 | ID=Msa0971160-mRNA-1:exon:1411;Parent=Msa0971160-mRNA-1 |
| chr6_4 | exon | 2812802 | 2812920 | 2812802 | ID=Msa0971160-mRNA-1:exon:1410;Parent=Msa0971160-mRNA-1 |
| chr6_4 | exon | 2813500 | 2813619 | 2813500 | ID=Msa0971160-mRNA-1:exon:1409;Parent=Msa0971160-mRNA-1 |
| chr6_4 | exon | 2814150 | 2814220 | 2814150 | ID=Msa0971160-mRNA-1:exon:1408;Parent=Msa0971160-mRNA-1 |
| chr6_4 | exon | 2816317 | 2816482 | 2816317 | ID=Msa0971160-mRNA-1:exon:1407;Parent=Msa0971160-mRNA-1 |
| chr6_4 | exon | 2816809 | 2816966 | 2816809 | ID=Msa0971160-mRNA-1:exon:1406;Parent=Msa0971160-mRNA-1 |
| chr6_4 | five_prime_UTR | 2816809 | 2816966 | 2816809 | ID=Msa0971160-mRNA-1:five_prime_utr;Parent=Msa0971160-mRNA-1 |
| chr6_4 | five_prime_UTR | 2816465 | 2816482 | 2816465 | ID=Msa0971160-mRNA-1:five_prime_utr;Parent=Msa0971160-mRNA-1 |
| chr6_4 | CDS | 2816317 | 2816464 | 2816317 | ID=Msa0971160-mRNA-1:cds;Parent=Msa0971160-mRNA-1 |
| chr6_4 | CDS | 2814150 | 2814220 | 2814150 | ID=Msa0971160-mRNA-1:cds;Parent=Msa0971160-mRNA-1 |
| chr6_4 | CDS | 2813500 | 2813619 | 2813500 | ID=Msa0971160-mRNA-1:cds;Parent=Msa0971160-mRNA-1 |
| chr6_4 | CDS | 2812802 | 2812920 | 2812802 | ID=Msa0971160-mRNA-1:cds;Parent=Msa0971160-mRNA-1 |
| chr6_4 | CDS | 2812499 | 2812607 | 2812499 | ID=Msa0971160-mRNA-1:cds;Parent=Msa0971160-mRNA-1 |
| Gene Sequence |
| Protein sequence |
