AlfalfaGEDB | MS.gene008833

M. sativa cultivar XinJiangDaYe / MS.gene008833

KEGG: -
GO: GO:0003674 GO:0005488 GO:0005515
PFAM: PF12796.10 PF13962.9

Nr:

Query id	Subject id	identity %	alignment length	mismatches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
MS.gene008833.t1	XP_013446189.1	73	466	116	3	1	457	1	465	7.00E-146	527.3

Swissprot:

Query id	Subject id	identity %	alignment length	mismatches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
MS.gene008833.t1	Q8GYH5	31.1	418	252	6	12	420	10	400	3.4e-16	87.8

Trembl:

Query id	Subject id	identity %	alignment length	mismatches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
MS.gene008833.t1	A0A072TSN3	73.0	466	116	3	1	457	1	465	5.0e-146	527.3

TFs/TRs:

Gene ID	Type	Classification

Protein Kinases:

Gene ID	Type	Classification

Network:

Co-expression Network:

Gene1	Gene2	correlation coefficient	p_value	FDR

PPI:

Gene1	Gene2	Type
MS.gene21734	MS.gene008833	PPI
MS.gene33377	MS.gene008833	PPI
MS.gene008767	MS.gene008833	PPI
MS.gene34712	MS.gene008833	PPI
MS.gene23196	MS.gene008833	PPI
MS.gene80163	MS.gene008833	PPI
MS.gene39623	MS.gene008833	PPI
MS.gene71122	MS.gene008833	PPI
MS.gene36842	MS.gene008833	PPI
MS.gene99554	MS.gene008833	PPI
MS.gene058128	MS.gene008833	PPI
MS.gene99588	MS.gene008833	PPI
MS.gene027075	MS.gene008833	PPI
MS.gene41291	MS.gene008833	PPI
MS.gene066501	MS.gene008833	PPI
MS.gene63085	MS.gene008833	PPI
MS.gene056455	MS.gene008833	PPI
MS.gene81055	MS.gene008833	PPI
MS.gene82740	MS.gene008833	PPI
MS.gene89986	MS.gene008833	PPI
MS.gene23881	MS.gene008833	PPI
MS.gene052956	MS.gene008833	PPI
MS.gene91775	MS.gene008833	PPI
MS.gene043662	MS.gene008833	PPI
MS.gene34009	MS.gene008833	PPI
MS.gene30177	MS.gene008833	PPI
MS.gene69965	MS.gene008833	PPI
MS.gene65463	MS.gene008833	PPI
MS.gene043742	MS.gene008833	PPI
MS.gene26532	MS.gene008833	PPI
MS.gene042783	MS.gene008833	PPI
MS.gene008833	MS.gene32723	PPI
MS.gene008833	MS.gene053363	PPI
MS.gene54764	MS.gene008833	PPI
MS.gene71204	MS.gene008833	PPI
MS.gene30172	MS.gene008833	PPI
MS.gene007486	MS.gene008833	PPI
MS.gene045937	MS.gene008833	PPI
MS.gene041770	MS.gene008833	PPI
MS.gene51278	MS.gene008833	PPI
MS.gene23852	MS.gene008833	PPI
MS.gene008833	MS.gene32726	PPI
MS.gene008833	MS.gene71122	PPI
MS.gene97943	MS.gene008833	PPI
MS.gene26672	MS.gene008833	PPI
MS.gene97379	MS.gene008833	PPI
MS.gene008833	MS.gene60920	PPI
MS.gene008833	MS.gene92243	PPI
MS.gene67157	MS.gene008833	PPI
MS.gene99973	MS.gene008833	PPI
MS.gene050456	MS.gene008833	PPI
MS.gene65775	MS.gene008833	PPI
MS.gene012203	MS.gene008833	PPI
MS.gene022109	MS.gene008833	PPI
MS.gene34651	MS.gene008833	PPI
MS.gene25244	MS.gene008833	PPI
MS.gene014931	MS.gene008833	PPI
MS.gene08470	MS.gene008833	PPI
MS.gene025229	MS.gene008833	PPI
MS.gene25515	MS.gene008833	PPI
MS.gene26019	MS.gene008833	PPI
MS.gene30174	MS.gene008833	PPI
MS.gene062662	MS.gene008833	PPI
MS.gene73119	MS.gene008833	PPI
MS.gene69687	MS.gene008833	PPI
MS.gene035805	MS.gene008833	PPI
MS.gene066500	MS.gene008833	PPI
MS.gene51258	MS.gene008833	PPI
MS.gene23810	MS.gene008833	PPI
MS.gene21888	MS.gene008833	PPI
MS.gene024753	MS.gene008833	PPI
MS.gene008833	MS.gene65775	PPI
MS.gene008833	MS.gene80163	PPI
MS.gene09785	MS.gene008833	PPI
MS.gene78281	MS.gene008833	PPI
MS.gene70008	MS.gene008833	PPI
MS.gene69966	MS.gene008833	PPI
MS.gene24806	MS.gene008833	PPI
MS.gene071113	MS.gene008833	PPI
MS.gene004844	MS.gene008833	PPI
MS.gene008833	MS.gene51278	PPI
MS.gene008833	MS.gene87218	PPI
MS.gene027071	MS.gene008833	PPI
MS.gene32723	MS.gene008833	PPI
MS.gene30433	MS.gene008833	PPI
MS.gene007487	MS.gene008833	PPI
MS.gene008833	MS.gene23881	PPI
MS.gene018518	MS.gene008833	PPI
MS.gene90400	MS.gene008833	PPI
MS.gene037184	MS.gene008833	PPI
MS.gene010910	MS.gene008833	PPI
MS.gene066464	MS.gene008833	PPI
MS.gene32726	MS.gene008833	PPI
MS.gene067705	MS.gene008833	PPI
MS.gene063222	MS.gene008833	PPI
MS.gene07706	MS.gene008833	PPI
MS.gene027074	MS.gene008833	PPI
MS.gene050270	MS.gene008833	PPI
MS.gene02469	MS.gene008833	PPI
MS.gene010912	MS.gene008833	PPI
MS.gene050457	MS.gene008833	PPI
MS.gene87218	MS.gene008833	PPI
MS.gene25024	MS.gene008833	PPI
MS.gene23811	MS.gene008833	PPI
MS.gene008833	MS.gene48655	PPI
MS.gene51335	MS.gene008833	PPI
MS.gene065848	MS.gene008833	PPI
MS.gene005995	MS.gene008833	PPI
MS.gene027441	MS.gene008833	PPI
MS.gene037950	MS.gene008833	PPI
MS.gene008833	MS.gene027072	PPI
MS.gene068249	MS.gene008833	PPI
MS.gene066046	MS.gene008833	PPI
MS.gene051003	MS.gene008833	PPI
MS.gene64441	MS.gene008833	PPI
MS.gene30176	MS.gene008833	PPI
MS.gene27223	MS.gene008833	PPI
MS.gene038519	MS.gene008833	PPI
MS.gene050272	MS.gene008833	PPI
MS.gene008833	MS.gene067705	PPI
MS.gene007485	MS.gene008833	PPI
MS.gene22482	MS.gene008833	PPI
MS.gene008833	MS.gene99973	PPI
MS.gene26021	MS.gene008833	PPI
MS.gene039682	MS.gene008833	PPI
MS.gene061932	MS.gene008833	PPI
MS.gene51262	MS.gene008833	PPI
MS.gene48655	MS.gene008833	PPI
MS.gene85534	MS.gene008833	PPI
MS.gene24922	MS.gene008833	PPI
MS.gene027073	MS.gene008833	PPI
MS.gene064542	MS.gene008833	PPI
MS.gene066467	MS.gene008833	PPI
MS.gene47479	MS.gene008833	PPI

Query id	Subject id	identity %	alignment length	mismatches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
MS.gene008833.t1	MTR_8g069880	80.687	466	80	3	1	457	1	465	0.0	769
MS.gene008833.t1	MTR_8g072510	58.531	422	172	3	3	423	6	425	1.95e-166	476
MS.gene008833.t1	MTR_3g016210	58.151	411	153	6	3	396	6	414	4.55e-153	442
MS.gene008833.t1	MTR_8g467780	56.325	419	170	5	7	413	11	428	4.48e-152	440
MS.gene008833.t1	MTR_8g062410	56.738	423	173	4	3	423	6	420	5.04e-152	440
MS.gene008833.t1	MTR_8g039620	57.921	404	163	5	3	401	10	411	2.64e-146	425
MS.gene008833.t1	MTR_7g021090	57.653	392	153	8	3	389	5	388	5.87e-144	418
MS.gene008833.t1	MTR_8g040930	58.357	353	143	3	50	399	2	353	1.07e-136	398
MS.gene008833.t1	MTR_8g041240	58.357	353	143	3	50	399	2	353	1.07e-136	398
MS.gene008833.t1	MTR_8g066670	54.953	424	185	6	2	422	1070	1490	7.79e-134	420
MS.gene008833.t1	MTR_8g073260	53.676	408	182	7	1	405	4	407	1.54e-132	390
MS.gene008833.t1	MTR_8g068990	56.452	372	144	5	10	378	15	371	1.11e-130	385
MS.gene008833.t1	MTR_7g451420	63.666	311	110	3	2	311	4	312	2.36e-128	374
MS.gene008833.t1	MTR_1g059930	57.550	351	145	4	7	355	12	360	9.84e-126	372
MS.gene008833.t1	MTR_3g105650	41.889	413	199	8	5	405	3	386	2.21e-97	299
MS.gene008833.t1	MTR_8g073275	43.405	417	152	10	50	396	2	404	4.80e-92	286
MS.gene008833.t1	MTR_1g069110	25.701	428	276	12	10	420	21	423	1.33e-29	120
MS.gene008833.t1	MTR_7g099580	24.773	331	194	8	16	341	21	301	9.59e-23	99.4
MS.gene008833.t1	MTR_2g101320	29.268	246	144	6	32	259	131	364	1.14e-20	95.5
MS.gene008833.t1	MTR_7g099570	28.788	198	126	4	7	199	9	196	3.79e-17	84.3
MS.gene008833.t1	MTR_2g101310	31.122	196	122	4	34	228	133	316	1.04e-16	83.2
MS.gene008833.t1	MTR_7g117620	24.601	313	191	7	26	308	97	394	3.30e-16	81.3
MS.gene008833.t1	MTR_2g101310	31.771	192	118	4	38	228	137	316	5.74e-16	80.5
MS.gene008833.t1	MTR_1g115575	26.351	296	168	10	42	307	169	444	5.58e-15	77.8
MS.gene008833.t1	MTR_4g062100	25.212	353	211	12	7	308	35	385	7.34e-15	77.0
MS.gene008833.t1	MTR_1g032100	23.952	334	203	9	6	308	59	372	1.67e-12	69.7

Query id	Subject id	identity %	alignment length	mismatches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
MS.gene008833.t1	AT4G10720	36.304	460	251	12	10	454	8	440	9.97e-81	257
MS.gene008833.t1	AT4G10720	35.307	456	228	12	10	454	8	407	4.97e-75	241
MS.gene008833.t1	AT1G14500	34.243	403	227	7	7	395	5	383	8.84e-72	233
MS.gene008833.t1	AT1G14480	37.073	410	211	11	7	395	5	388	6.76e-71	231
MS.gene008833.t1	AT5G54620	36.761	389	214	7	12	392	10	374	2.98e-69	227
MS.gene008833.t1	AT5G15500	33.408	449	271	7	7	445	6	436	3.84e-68	224
MS.gene008833.t1	AT5G54610	31.127	408	242	9	12	409	10	388	3.31e-59	200
MS.gene008833.t1	AT1G14480	32.924	407	189	9	7	395	5	345	2.19e-51	179
MS.gene008833.t1	AT5G15500	29.023	348	219	7	108	445	1	330	7.30e-33	127
MS.gene008833.t1	AT5G51160	27.419	372	233	7	61	405	35	396	3.45e-30	122
MS.gene008833.t1	AT4G03460	30.303	231	122	8	90	307	249	453	2.75e-16	81.6
MS.gene008833.t1	AT4G03460	30.303	231	122	8	90	307	281	485	2.83e-16	81.6
MS.gene008833.t1	AT1G03670	29.412	221	117	4	99	307	279	472	6.10e-16	80.9
MS.gene008833.t1	AT4G03500	28.972	214	139	4	94	307	301	501	1.55e-15	79.7
MS.gene008833.t1	AT4G03500	28.972	214	139	4	94	307	278	478	1.85e-15	79.3
MS.gene008833.t1	AT4G03500	28.972	214	139	4	94	307	278	478	1.85e-15	79.3
MS.gene008833.t1	AT5G54700	26.316	342	191	14	93	420	17	311	1.62e-14	75.1
MS.gene008833.t1	AT3G12360	26.190	336	191	12	22	307	102	430	1.68e-14	76.3
MS.gene008833.t1	AT3G12360	26.190	336	191	12	22	307	114	442	1.70e-14	76.3
MS.gene008833.t1	AT3G09550	25.982	331	188	13	10	307	150	456	3.31e-13	72.0
MS.gene008833.t1	AT3G09550	25.982	331	188	13	10	307	150	456	3.31e-13	72.0
MS.gene008833.t1	AT3G09550	25.982	331	188	13	10	307	157	463	3.43e-13	72.0
MS.gene008833.t1	AT2G01680	24.012	329	200	9	13	310	68	377	3.43e-13	72.0
MS.gene008833.t1	AT5G54710	23.581	458	246	18	21	438	181	574	4.01e-13	72.0
MS.gene008833.t1	AT5G54710	23.581	458	246	18	21	438	226	619	4.27e-13	72.0
MS.gene008833.t1	AT2G31820	25.740	338	196	14	19	319	193	512	4.90e-12	68.6
MS.gene008833.t1	AT4G03480	23.810	336	174	11	6	323	359	630	1.48e-11	67.0
MS.gene008833.t1	AT4G03480	23.810	336	174	11	6	323	356	627	1.66e-11	67.0
MS.gene008833.t1	AT1G05640	24.915	293	177	11	42	308	191	466	7.07e-11	64.7

Find 88 sgRNAs with CRISPR-Local

Find 110 sgRNAs with CRISPR-GE

CRISPR-Local

CRISPR-Local
sgRNA_sequence	on_target_score	Position	Region
AAGGACCTTGTCAAAGTTAA+AGG	0.247391	8.1:-34982895	MS.gene008833:CDS
AAAGGTCAATCTCTCCAATT+TGG	0.255210	8.1:+34982839	None:intergenic
CTTCATTATGCAAGCCAAAT+TGG	0.271372	8.1:-34982853	MS.gene008833:CDS
CGCCATTATAAACATGAAAA+TGG	0.274123	8.1:+34981829	None:intergenic
TGCCTGCCACCACATCCTTC+TGG	0.301124	8.1:+34982641	None:intergenic
TCTATCTCCCTCAAAATAGA+TGG	0.305208	8.1:+34983105	None:intergenic
GGTAAAGGACCTAGAAAATA+TGG	0.312482	8.1:-34981735	MS.gene008833:CDS
ATTTCTTTCTCTATTCATAT+TGG	0.313123	8.1:-34982045	MS.gene008833:CDS
TAATGTACATTCCAGTGATT+TGG	0.340555	8.1:-34981952	MS.gene008833:CDS
AAGTTCAAAGACGACTATTA+TGG	0.352996	8.1:-34982299	MS.gene008833:CDS
TTGCATATCGCCGCATTTAA+CGG	0.361953	8.1:-34983057	MS.gene008833:CDS
GCGCATTAATAACAGCAATA+TGG	0.370389	8.1:+34982749	None:intergenic
CCTTGAGAAAATAAGCTAAA+AGG	0.376196	8.1:+34982821	None:intergenic
TTTCCTTTGGTAGAAATAGT+AGG	0.384265	8.1:+34982097	None:intergenic
GGGACTTAGTACTGATTGAT+AGG	0.389319	8.1:+34982180	None:intergenic
TTTCAAATTCATAACTTCAA+TGG	0.390293	8.1:+34983020	None:intergenic
GTCAAGTATTCAATAGATTC+AGG	0.398395	8.1:+34982793	None:intergenic
TTCATAACTTCAATGGCAAA+AGG	0.408215	8.1:+34983027	None:intergenic
CAAAGGAAATGCTGGAAAAT+CGG	0.413313	8.1:-34982083	MS.gene008833:CDS
TTTGGTAGAAATAGTAGGAT+TGG	0.414631	8.1:+34982102	None:intergenic
TTGACTCCAACGGGGAAAAC+AGG	0.417679	8.1:-34981980	MS.gene008833:CDS
GCTGGCTCGAAAGAAATTAC+AGG	0.419669	8.1:-34982699	MS.gene008833:CDS
AACAACCATGGTTGTGGTAA+AGG	0.427041	8.1:-34981750	MS.gene008833:CDS
ATATTACCCGCTTCAGCTGC+AGG	0.439778	8.1:+34983159	None:intergenic
AGTATATCAAGATTGGTCAT+TGG	0.445141	8.1:+34983186	None:intergenic
AAGGAAATATTATTCAGTGC+AGG	0.459545	8.1:-34982373	MS.gene008833:CDS
ATGACAGGCAGTTCGATTGT+TGG	0.461744	8.1:-34982470	MS.gene008833:intron
TTTGAACTTAGTTTATATGC+AGG	0.465798	8.1:+34982313	None:intergenic
GCATTGATGACTTCGGTGCC+AGG	0.473950	8.1:+34982343	None:intergenic
ATTTCTACCAAAGGAAATGC+TGG	0.473959	8.1:-34982091	MS.gene008833:CDS
TTTGATGACAAGGAACTTTG+AGG	0.475121	8.1:-34982431	MS.gene008833:CDS
CCCTAAAAGTACTACTTGGC+TGG	0.477209	8.1:-34982717	MS.gene008833:CDS
CATAGAATATAGATAACTAA+TGG	0.479801	8.1:+34981925	None:intergenic
AGGACCTTGTCAAAGTTAAA+GGG	0.480217	8.1:-34982894	MS.gene008833:CDS
AACCAGAAGGATGTGGTGGC+AGG	0.483502	8.1:-34982643	MS.gene008833:CDS
CTTAGACCTGCAGCTGAAGC+GGG	0.492988	8.1:-34983165	MS.gene008833:CDS
GGTAGAAATAGTAGGATTGG+AGG	0.494793	8.1:+34982105	None:intergenic
TTCAGTGCAGGGGCAAAACC+TGG	0.497052	8.1:-34982361	MS.gene008833:CDS
TTTGCATGGCAAGGTGGATA+GGG	0.500986	8.1:+34982959	None:intergenic
CTAATGGCAAACCAAATCAC+TGG	0.510278	8.1:+34981941	None:intergenic
TGCTATAGTTGATATCGAAA+AGG	0.511615	8.1:+34982012	None:intergenic
GACGCCCTAAAAGTACTACT+TGG	0.518337	8.1:-34982721	MS.gene008833:CDS
CCTTCCCTTTAACTTTGACA+AGG	0.523374	8.1:+34982890	None:intergenic
AGGTCTAAGTATATCAAGAT+TGG	0.530471	8.1:+34983179	None:intergenic
TCATAACTTCAATGGCAAAA+GGG	0.531318	8.1:+34983028	None:intergenic
TATAAACATGAAAATGGTAC+CGG	0.532174	8.1:+34981835	None:intergenic
AGTTGCAACCCTTGTTGCAA+CGG	0.532642	8.1:-34982206	MS.gene008833:CDS
CTCGAAAGAAATTACAGGAC+AGG	0.533589	8.1:-34982694	MS.gene008833:CDS
CAGGACAGGTGCTATAGAGC+TGG	0.534380	8.1:-34982680	MS.gene008833:CDS
CTATCTCCCTCAAAATAGAT+GGG	0.536487	8.1:+34983106	None:intergenic
CGTACTTTAGTTTCAAGCAG+TGG	0.538936	8.1:-34981808	MS.gene008833:CDS
ACACGGTATCGAAATGTGTA+GGG	0.545806	8.1:+34981891	None:intergenic
GATAGGTTGCCGTTGCAACA+AGG	0.548614	8.1:+34982197	None:intergenic
AGGAAATATTATTCAGTGCA+GGG	0.550356	8.1:-34982372	MS.gene008833:CDS
GTCAAAGTTAAAGGGAAGGA+AGG	0.554942	8.1:-34982886	MS.gene008833:CDS
TTTAGCTTGAGAGCAAATGA+AGG	0.556450	8.1:+34982997	None:intergenic
CTTCAATGGCAAAAGGGAGA+TGG	0.558271	8.1:+34983034	None:intergenic
ACTTAGTTTATATGCAGGTG+TGG	0.562129	8.1:+34982318	None:intergenic
ACTTAGACCTGCAGCTGAAG+CGG	0.565189	8.1:-34983166	MS.gene008833:CDS
AGAAACAACAACCATGGTTG+TGG	0.570545	8.1:-34981756	MS.gene008833:CDS
TTAACCTGATAAACTTCACC+AGG	0.572202	8.1:+34982157	None:intergenic
GCTCTCAAGCTAAATAAGCA+AGG	0.573372	8.1:-34982988	MS.gene008833:CDS
CTAAAATGAATTTGATGACA+AGG	0.577219	8.1:-34982441	MS.gene008833:CDS
CAACTATCAACAAAGAGTTA+CGG	0.577286	8.1:+34982224	None:intergenic
ATAGGTTGCCGTTGCAACAA+GGG	0.580266	8.1:+34982198	None:intergenic
CTTAGTTTATATGCAGGTGT+GGG	0.582148	8.1:+34982319	None:intergenic
ATTTGGCTTGCATAATGAAG+AGG	0.588329	8.1:+34982856	None:intergenic
AATACTGAACCAGAAGGATG+TGG	0.597872	8.1:-34982650	MS.gene008833:CDS
AATCCTACTATTTCTACCAA+AGG	0.603989	8.1:-34982100	MS.gene008833:CDS
AACACGGTATCGAAATGTGT+AGG	0.608665	8.1:+34981890	None:intergenic
TTAAATGCGGCGATATGCAA+AGG	0.609641	8.1:+34983060	None:intergenic
CCTTGTCAAAGTTAAAGGGA+AGG	0.610782	8.1:-34982890	MS.gene008833:CDS
CATAGCAACTACGAAGAGCA+AGG	0.622362	8.1:-34982392	MS.gene008833:CDS
AAATAAAATACTGAACCAGA+AGG	0.625252	8.1:-34982656	MS.gene008833:CDS
TAGGTCCTTTACCACAACCA+TGG	0.629700	8.1:+34981745	None:intergenic
GGAAATATTATTCAGTGCAG+GGG	0.635462	8.1:-34982371	MS.gene008833:CDS
TGTGGGAGCATTGATGACTT+CGG	0.649274	8.1:+34982336	None:intergenic
ACTGAACCAGAAGGATGTGG+TGG	0.650581	8.1:-34982647	MS.gene008833:CDS
TTCAAGAAGTGATCAACATG+AGG	0.657499	8.1:-34982596	MS.gene008833:intron
GCAAAAGAAAGAAAAGACAA+TGG	0.660962	8.1:-34982941	MS.gene008833:CDS
CTATTGAATACTTGACTGTG+AGG	0.662312	8.1:-34982786	MS.gene008833:CDS
AGGGAGATGGCCGTTAAATG+CGG	0.663051	8.1:+34983047	None:intergenic
CACGGTATCGAAATGTGTAG+GGG	0.676632	8.1:+34981892	None:intergenic
ATCAGCAGAAACAACAACCA+TGG	0.685799	8.1:-34981762	MS.gene008833:CDS
TAACCTGATAAACTTCACCA+GGG	0.695982	8.1:+34982158	None:intergenic
AACCTGATAAACTTCACCAG+GGG	0.700058	8.1:+34982159	None:intergenic
ACCTGATAAACTTCACCAGG+GGG	0.712245	8.1:+34982160	None:intergenic
ATAATAGATCAAAACAAACA+CGG	0.734098	8.1:+34981874	None:intergenic

CRISPR-GE

badsite warning	sgRNA_sequence	Strand	Position	Region	GC_content
!!	ATAATAGATCAAAACAAACA+CGG	+	chr8.1:34983033-34983052	None:intergenic	20.0%
!!	ATTTCTTTCTCTATTCATAT+TGG	-	chr8.1:34982859-34982878	MS.gene008833:CDS	20.0%
!!	CATAGAATATAGATAACTAA+TGG	+	chr8.1:34982982-34983001	None:intergenic	20.0%
!!	TTTCAAATTCATAACTTCAA+TGG	+	chr8.1:34981887-34981906	None:intergenic	20.0%
!!!	TACCATTTTCATGTTTATAA+TGG	-	chr8.1:34983073-34983092	MS.gene008833:CDS	20.0%
!!!	TATAATTCAATTGCATTTTC+CGG	-	chr8.1:34983050-34983069	MS.gene008833:CDS	20.0%
!	AAATAAAATACTGAACCAGA+AGG	-	chr8.1:34982248-34982267	MS.gene008833:CDS	25.0%
!	TATAAACATGAAAATGGTAC+CGG	+	chr8.1:34983072-34983091	None:intergenic	25.0%
!	TGATTATTAATCGTTATGAC+AGG	-	chr8.1:34982419-34982438	MS.gene008833:CDS	25.0%
!	TTTGAACTTAGTTTATATGC+AGG	+	chr8.1:34982594-34982613	None:intergenic	25.0%
!!	CTAAAATGAATTTGATGACA+AGG	-	chr8.1:34982463-34982482	MS.gene008833:CDS	25.0%
!!	TTTGTGAATCCATATTTTCT+AGG	+	chr8.1:34983181-34983200	None:intergenic	25.0%
!!!	AATACTTATTTTGACTCCAA+CGG	-	chr8.1:34982914-34982933	MS.gene008833:CDS	25.0%
!!!	CTTTTTCAATTACAGTATAG+AGG	+	chr8.1:34981777-34981796	None:intergenic	25.0%
!!!	TGAATACTTTTAAAGCAGAT+TGG	-	chr8.1:34982363-34982382	MS.gene008833:CDS	25.0%
	AAGGAAATATTATTCAGTGC+AGG	-	chr8.1:34982531-34982550	MS.gene008833:intron	30.0%
	AAGTTCAAAGACGACTATTA+TGG	-	chr8.1:34982605-34982624	MS.gene008833:CDS	30.0%
	AGGAAATATTATTCAGTGCA+GGG	-	chr8.1:34982532-34982551	MS.gene008833:intron	30.0%
	AGGTCTAAGTATATCAAGAT+TGG	+	chr8.1:34981728-34981747	None:intergenic	30.0%
	CAACTATCAACAAAGAGTTA+CGG	+	chr8.1:34982683-34982702	None:intergenic	30.0%
	CCTTGAGAAAATAAGCTAAA+AGG	+	chr8.1:34982086-34982105	None:intergenic	30.0%
	CGCCATTATAAACATGAAAA+TGG	+	chr8.1:34983078-34983097	None:intergenic	30.0%
	GCAAAAGAAAGAAAAGACAA+TGG	-	chr8.1:34981963-34981982	MS.gene008833:CDS	30.0%
	GTCAAGTATTCAATAGATTC+AGG	+	chr8.1:34982114-34982133	None:intergenic	30.0%
	TAATGTACATTCCAGTGATT+TGG	-	chr8.1:34982952-34982971	MS.gene008833:CDS	30.0%
	TCATAACTTCAATGGCAAAA+GGG	+	chr8.1:34981879-34981898	None:intergenic	30.0%
	TTCATAACTTCAATGGCAAA+AGG	+	chr8.1:34981880-34981899	None:intergenic	30.0%
	TTTCCTTTGGTAGAAATAGT+AGG	+	chr8.1:34982810-34982829	None:intergenic	30.0%
	TTTGGTAGAAATAGTAGGAT+TGG	+	chr8.1:34982805-34982824	None:intergenic	30.0%
!	AAAAAGTCCCATCTATTTTG+AGG	-	chr8.1:34981791-34981810	MS.gene008833:CDS	30.0%
!	TGCTATAGTTGATATCGAAA+AGG	+	chr8.1:34982895-34982914	None:intergenic	30.0%
!	TGTCTTTTCTTTCTTTTGCA+TGG	+	chr8.1:34981962-34981981	None:intergenic	30.0%
!!	AAAAGTCCCATCTATTTTGA+GGG	-	chr8.1:34981792-34981811	MS.gene008833:CDS	30.0%
!!	AATCCTACTATTTCTACCAA+AGG	-	chr8.1:34982804-34982823	MS.gene008833:CDS	30.0%
!!!	ATACTTATTTTGACTCCAAC+GGG	-	chr8.1:34982915-34982934	MS.gene008833:CDS	30.0%
!!!	CCTTTTAGCTTATTTTCTCA+AGG	-	chr8.1:34982083-34982102	MS.gene008833:CDS	30.0%
	AAAGGTCAATCTCTCCAATT+TGG	+	chr8.1:34982068-34982087	None:intergenic	35.0%
	AAGGACCTTGTCAAAGTTAA+AGG	-	chr8.1:34982009-34982028	MS.gene008833:CDS	35.0%
	ACTTAGTTTATATGCAGGTG+TGG	+	chr8.1:34982589-34982608	None:intergenic	35.0%
	AGGACCTTGTCAAAGTTAAA+GGG	-	chr8.1:34982010-34982029	MS.gene008833:CDS	35.0%
	ATTTCTACCAAAGGAAATGC+TGG	-	chr8.1:34982813-34982832	MS.gene008833:CDS	35.0%
	CAAAGGAAATGCTGGAAAAT+CGG	-	chr8.1:34982821-34982840	MS.gene008833:CDS	35.0%
	CTATCTCCCTCAAAATAGAT+GGG	+	chr8.1:34981801-34981820	None:intergenic	35.0%
	CTATTGAATACTTGACTGTG+AGG	-	chr8.1:34982118-34982137	MS.gene008833:CDS	35.0%
	CTTAGTTTATATGCAGGTGT+GGG	+	chr8.1:34982588-34982607	None:intergenic	35.0%
	CTTCATTATGCAAGCCAAAT+TGG	-	chr8.1:34982051-34982070	MS.gene008833:CDS	35.0%
	GCGCATTAATAACAGCAATA+TGG	+	chr8.1:34982158-34982177	None:intergenic	35.0%
	GGAAATATTATTCAGTGCAG+GGG	-	chr8.1:34982533-34982552	MS.gene008833:intron	35.0%
	GGTAAAGGACCTAGAAAATA+TGG	-	chr8.1:34983169-34983188	MS.gene008833:CDS	35.0%
	TAACCTGATAAACTTCACCA+GGG	+	chr8.1:34982749-34982768	None:intergenic	35.0%
	TCTATCTCCCTCAAAATAGA+TGG	+	chr8.1:34981802-34981821	None:intergenic	35.0%
	TTAACCTGATAAACTTCACC+AGG	+	chr8.1:34982750-34982769	None:intergenic	35.0%
	TTCAAGAAGTGATCAACATG+AGG	-	chr8.1:34982308-34982327	MS.gene008833:CDS	35.0%
!	TTTCTTTCTTTTGCATGGCA+AGG	+	chr8.1:34981957-34981976	None:intergenic	35.0%
!	TTTGATGACAAGGAACTTTG+AGG	-	chr8.1:34982473-34982492	MS.gene008833:intron	35.0%
!!	ATTTGGCTTGCATAATGAAG+AGG	+	chr8.1:34982051-34982070	None:intergenic	35.0%
!!	GTGTTTTGTTGACATGAACA+AGG	-	chr8.1:34981990-34982009	MS.gene008833:CDS	35.0%
!!	TTTAGCTTGAGAGCAAATGA+AGG	+	chr8.1:34981910-34981929	None:intergenic	35.0%
!!!	TACTTATTTTGACTCCAACG+GGG	-	chr8.1:34982916-34982935	MS.gene008833:CDS	35.0%
	AACAACCATGGTTGTGGTAA+AGG	-	chr8.1:34983154-34983173	MS.gene008833:CDS	40.0%
	AACCTGATAAACTTCACCAG+GGG	+	chr8.1:34982748-34982767	None:intergenic	40.0%
	AATACTGAACCAGAAGGATG+TGG	-	chr8.1:34982254-34982273	MS.gene008833:CDS	40.0%
	AGAAACAACAACCATGGTTG+TGG	-	chr8.1:34983148-34983167	MS.gene008833:CDS	40.0%
	ATCAGCAGAAACAACAACCA+TGG	-	chr8.1:34983142-34983161	MS.gene008833:CDS	40.0%
	CCTTGTCAAAGTTAAAGGGA+AGG	-	chr8.1:34982014-34982033	MS.gene008833:CDS	40.0%
	CTAATGGCAAACCAAATCAC+TGG	+	chr8.1:34982966-34982985	None:intergenic	40.0%
	CTCGAAAGAAATTACAGGAC+AGG	-	chr8.1:34982210-34982229	MS.gene008833:CDS	40.0%
	GCTCTCAAGCTAAATAAGCA+AGG	-	chr8.1:34981916-34981935	MS.gene008833:CDS	40.0%
	GGTAGAAATAGTAGGATTGG+AGG	+	chr8.1:34982802-34982821	None:intergenic	40.0%
	GTCAAAGTTAAAGGGAAGGA+AGG	-	chr8.1:34982018-34982037	MS.gene008833:CDS	40.0%
	TTAAATGCGGCGATATGCAA+AGG	+	chr8.1:34981847-34981866	None:intergenic	40.0%
	TTGCATATCGCCGCATTTAA+CGG	-	chr8.1:34981847-34981866	MS.gene008833:CDS	40.0%
!	AACACGGTATCGAAATGTGT+AGG	+	chr8.1:34983017-34983036	None:intergenic	40.0%
!	ACACGGTATCGAAATGTGTA+GGG	+	chr8.1:34983016-34983035	None:intergenic	40.0%
!	CCAGCCAAGTAGTACTTTTA+GGG	+	chr8.1:34982190-34982209	None:intergenic	40.0%
!	CCTTCCCTTTAACTTTGACA+AGG	+	chr8.1:34982017-34982036	None:intergenic	40.0%
!	CGATTTTCCAGCATTTCCTT+TGG	+	chr8.1:34982823-34982842	None:intergenic	40.0%
!	CGTACTTTAGTTTCAAGCAG+TGG	-	chr8.1:34983096-34983115	MS.gene008833:CDS	40.0%
!!	GGGACTTAGTACTGATTGAT+AGG	+	chr8.1:34982727-34982746	None:intergenic	40.0%
	ACCTGATAAACTTCACCAGG+GGG	+	chr8.1:34982747-34982766	None:intergenic	45.0%
	AGTTGCAACCCTTGTTGCAA+CGG	-	chr8.1:34982698-34982717	MS.gene008833:CDS	45.0%
	ATAGGTTGCCGTTGCAACAA+GGG	+	chr8.1:34982709-34982728	None:intergenic	45.0%
	ATGACAGGCAGTTCGATTGT+TGG	-	chr8.1:34982434-34982453	MS.gene008833:CDS	45.0%
	CATAGCAACTACGAAGAGCA+AGG	-	chr8.1:34982512-34982531	MS.gene008833:intron	45.0%
	CTTCAATGGCAAAAGGGAGA+TGG	+	chr8.1:34981873-34981892	None:intergenic	45.0%
	TAGGTCCTTTACCACAACCA+TGG	+	chr8.1:34983162-34983181	None:intergenic	45.0%
	TTTGCATGGCAAGGTGGATA+GGG	+	chr8.1:34981948-34981967	None:intergenic	45.0%
!	CACGGTATCGAAATGTGTAG+GGG	+	chr8.1:34983015-34983034	None:intergenic	45.0%
!	CTTTCTTTTGCATGGCAAGG+TGG	+	chr8.1:34981954-34981973	None:intergenic	45.0%
!	GCCAGCCAAGTAGTACTTTT+AGG	+	chr8.1:34982191-34982210	None:intergenic	45.0%
!	TTTTGCATGGCAAGGTGGAT+AGG	+	chr8.1:34981949-34981968	None:intergenic	45.0%
!!	CCCTAAAAGTACTACTTGGC+TGG	-	chr8.1:34982187-34982206	MS.gene008833:CDS	45.0%
!!	GACGCCCTAAAAGTACTACT+TGG	-	chr8.1:34982183-34982202	MS.gene008833:CDS	45.0%
!!	GCTGGCTCGAAAGAAATTAC+AGG	-	chr8.1:34982205-34982224	MS.gene008833:CDS	45.0%
!!	TGTGGGAGCATTGATGACTT+CGG	+	chr8.1:34982571-34982590	None:intergenic	45.0%
	ACTGAACCAGAAGGATGTGG+TGG	-	chr8.1:34982257-34982276	MS.gene008833:CDS	50.0%
	ACTTAGACCTGCAGCTGAAG+CGG	-	chr8.1:34981738-34981757	MS.gene008833:CDS	50.0%
	AGGGAGATGGCCGTTAAATG+CGG	+	chr8.1:34981860-34981879	None:intergenic	50.0%
	ATATTACCCGCTTCAGCTGC+AGG	+	chr8.1:34981748-34981767	None:intergenic	50.0%
	CAATCAGTACTAAGTCCCCC+TGG	-	chr8.1:34982729-34982748	MS.gene008833:CDS	50.0%
	GATAGGTTGCCGTTGCAACA+AGG	+	chr8.1:34982710-34982729	None:intergenic	50.0%
	TCCCCCTGGTGAAGTTTATC+AGG	-	chr8.1:34982743-34982762	MS.gene008833:CDS	50.0%
	TTGACTCCAACGGGGAAAAC+AGG	-	chr8.1:34982924-34982943	MS.gene008833:CDS	50.0%
!	AGACTACCTGTTTTCCCCGT+TGG	+	chr8.1:34982933-34982952	None:intergenic	50.0%
	AACCAGAAGGATGTGGTGGC+AGG	-	chr8.1:34982261-34982280	MS.gene008833:CDS	55.0%
	CTTAGACCTGCAGCTGAAGC+GGG	-	chr8.1:34981739-34981758	MS.gene008833:CDS	55.0%
	TTCAGTGCAGGGGCAAAACC+TGG	-	chr8.1:34982543-34982562	MS.gene008833:intron	55.0%
!	CAGGACAGGTGCTATAGAGC+TGG	-	chr8.1:34982224-34982243	MS.gene008833:CDS	55.0%
!!	GCATTGATGACTTCGGTGCC+AGG	+	chr8.1:34982564-34982583	None:intergenic	55.0%
	TGCCTGCCACCACATCCTTC+TGG	+	chr8.1:34982266-34982285	None:intergenic	60.0%

Chromosome	Type	Strat	End	Strand	Name
chr8.1	gene	34981721	34983205	34981721	ID=MS.gene008833
chr8.1	mRNA	34981721	34983205	34981721	ID=MS.gene008833.t1;Parent=MS.gene008833
chr8.1	exon	34982597	34983205	34982597	ID=MS.gene008833.t1.exon1;Parent=MS.gene008833.t1
chr8.1	CDS	34982597	34983205	34982597	ID=cds.MS.gene008833.t1;Parent=MS.gene008833.t1
chr8.1	exon	34981721	34982485	34981721	ID=MS.gene008833.t1.exon2;Parent=MS.gene008833.t1
chr8.1	CDS	34981721	34982485	34981721	ID=cds.MS.gene008833.t1;Parent=MS.gene008833.t1

Gene Sequence

>MS.gene008833

ATGACCAATCTTGATATACTTAGACCTGCAGCTGAAGCGGGTAATATAGAAGACCTCTATACTGTAATTGAAAAAGTCCCATCTATTTTGAGGGAGATAGATTTAGAACAATTTGTTCAAACTCCTTTGCATATCGCCGCATTTAACGGCCATCTCCCTTTTGCCATTGAAGTTATGAATTTGAAACCTTCATTTGCTCTCAAGCTAAATAAGCAAGGATTCTGCCCTATCCACCTTGCCATGCAAAAGAAAGAAAAGACAATGGTGTTGTGTTTTGTTGACATGAACAAGGACCTTGTCAAAGTTAAAGGGAAGGAAGGCTTGACTCCTCTTCATTATGCAAGCCAAATTGGAGAGATTGACCTTTTAGCTTATTTTCTCAAGGCATGTCCTGAATCTATTGAATACTTGACTGTGAGGTGCGAGACTGCACTCCATATTGCTGTTATTAATGCGCAGTTTGACGCCCTAAAAGTACTACTTGGCTGGCTCGAAAGAAATTACAGGACAGGTGCTATAGAGCTGGAAAATAAAATACTGAACCAGAAGGATGTGGTGGCAGGCAACACTATTTTGCACATTTCAGCTTCAAGAAGTGATCAACATGAGGTAATCATTTTTTTATTGAAAGAATAATTCAAATGAATACTTTTAAAGCAGATTGGTACATTCTTCTGAATATTTTTTTAGCTGTTCAGTGATTATTAATCGTTATGACAGGCAGTTCGATTGTTGGTAAATACTAAAATGAATTTGATGACAAGGAACTTTGAGGACGAAACAGCATTAGACATAGCAACTACGAAGAGCAAGGAAATATTATTCAGTGCAGGGGCAAAACCTGGCACCGAAGTCATCAATGCTCCCACACCTGCATATAAACTAAGTTCAAAGACGACTATTATGGATAAAGTGACAATTTATATGCATCGCATAACACAAAATATAACAGATGAACACCGTAACTCTTTGTTGATAGTTGCAACCCTTGTTGCAACGGCAACCTATCAATCAGTACTAAGTCCCCCTGGTGAAGTTTATCAGGTTAATGCTAGTGACAAAAATTTGAACATCACTTCCTCCAATCCTACTATTTCTACCAAAGGAAATGCTGGAAAATCGGTCTTGTCAAAAGTTGATTTCTTTCTCTATTCATATTGGAATATGTTTTCCTTTTCGATATCAACTATAGCAATACTTATTTTGACTCCAACGGGGAAAACAGGTAGTCTAATGTACATTCCAGTGATTTGGTTTGCCATTAGTTATCTATATTCTATGTTGTTGATATCCCCTACACATTTCGATACCGTGTTTGTTTTGATCTATTATAATTCAATTGCATTTTCCGGTACCATTTTCATGTTTATAATGGCGTACTTTAGTTTCAAGCAGTGGATAAATGCTAAGAAGCTAAGTAGATCAGCAGAAACAACAACCATGGTTGTGGTAAAGGACCTAGAAAATATGGATTCACAAATTTAA

Protein sequence

>MS.gene008833.t1

MTNLDILRPAAEAGNIEDLYTVIEKVPSILREIDLEQFVQTPLHIAAFNGHLPFAIEVMNLKPSFALKLNKQGFCPIHLAMQKKEKTMVLCFVDMNKDLVKVKGKEGLTPLHYASQIGEIDLLAYFLKACPESIEYLTVRCETALHIAVINAQFDALKVLLGWLERNYRTGAIELENKILNQKDVVAGNTILHISASRSDQHEAVRLLVNTKMNLMTRNFEDETALDIATTKSKEILFSAGAKPGTEVINAPTPAYKLSSKTTIMDKVTIYMHRITQNITDEHRNSLLIVATLVATATYQSVLSPPGEVYQVNASDKNLNITSSNPTISTKGNAGKSVLSKVDFFLYSYWNMFSFSISTIAILILTPTGKTGSLMYIPVIWFAISYLYSMLLISPTHFDTVFVLIYYNSIAFSGTIFMFIMAYFSFKQWINAKKLSRSAETTTMVVVKDLENMDSQI