AlfalfaGEDB | MS.gene97379

M. sativa cultivar XinJiangDaYe / MS.gene97379

KEGG: -
GO: GO:0003674 GO:0005488 GO:0005515
PFAM: PF12796.10 PF13962.9

Nr:

Query id	Subject id	identity %	alignment length	mismatches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
MS.gene97379.t1	XP_003598604.2	77.5	356	28	3	6	309	1	356	2.80E-138	501.5

Swissprot:

Query id	Subject id	identity %	alignment length	mismatches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
MS.gene97379.t1	Q8GYH5	26.6	305	174	6	14	272	4	304	1.2e-20	102.1

Trembl:

Query id	Subject id	identity %	alignment length	mismatches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
MS.gene97379.t1	G7IYT6	77.5	356	28	3	6	309	1	356	2.0e-138	501.5

TFs/TRs:

Gene ID	Type	Classification

Protein Kinases:

Gene ID	Type	Classification

Network:

Co-expression Network:

Gene1	Gene2	correlation coefficient	p_value	FDR

PPI:

Gene1	Gene2	Type
MS.gene007486	MS.gene97379	PPI
MS.gene041770	MS.gene97379	PPI
MS.gene97379	MS.gene51262	PPI
MS.gene23852	MS.gene97379	PPI
MS.gene97379	MS.gene23881	PPI
MS.gene97379	MS.gene26672	PPI
MS.gene97943	MS.gene97379	PPI
MS.gene97379	MS.gene014931	PPI
MS.gene97379	MS.gene062662	PPI
MS.gene67157	MS.gene97379	PPI
MS.gene97379	MS.gene066500	PPI
MS.gene97379	MS.gene30177	PPI
MS.gene012203	MS.gene97379	PPI
MS.gene97379	MS.gene70008	PPI
MS.gene25244	MS.gene97379	PPI
MS.gene97379	MS.gene90400	PPI
MS.gene08470	MS.gene97379	PPI
MS.gene97379	MS.gene09785	PPI
MS.gene69687	MS.gene97379	PPI
MS.gene97379	MS.gene81055	PPI
MS.gene035805	MS.gene97379	PPI
MS.gene97379	MS.gene33377	PPI
MS.gene69965	MS.gene97379	PPI
MS.gene97379	MS.gene027072	PPI
MS.gene97379	MS.gene65463	PPI
MS.gene97379	MS.gene007485	PPI
MS.gene82740	MS.gene97379	PPI
MS.gene024753	MS.gene97379	PPI
MS.gene78281	MS.gene97379	PPI
MS.gene97379	MS.gene87218	PPI
MS.gene97379	MS.gene025229	PPI
MS.gene69966	MS.gene97379	PPI
MS.gene24806	MS.gene97379	PPI
MS.gene071113	MS.gene97379	PPI
MS.gene97379	MS.gene043742	PPI
MS.gene97379	MS.gene027075	PPI
MS.gene027071	MS.gene97379	PPI
MS.gene97379	MS.gene027441	PPI
MS.gene97379	MS.gene050457	PPI
MS.gene97379	MS.gene99973	PPI
MS.gene30433	MS.gene97379	PPI
MS.gene007487	MS.gene97379	PPI
MS.gene97379	MS.gene008833	PPI
MS.gene010910	MS.gene97379	PPI
MS.gene066464	MS.gene97379	PPI
MS.gene97379	MS.gene064542	PPI
MS.gene063222	MS.gene97379	PPI
MS.gene07706	MS.gene97379	PPI
MS.gene027074	MS.gene97379	PPI
MS.gene97379	MS.gene48655	PPI
MS.gene010912	MS.gene97379	PPI
MS.gene23811	MS.gene97379	PPI
MS.gene23810	MS.gene97379	PPI
MS.gene97379	MS.gene027073	PPI
MS.gene97379	MS.gene34712	PPI
MS.gene51335	MS.gene97379	PPI
MS.gene97379	MS.gene037184	PPI
MS.gene005995	MS.gene97379	PPI
MS.gene037950	MS.gene97379	PPI
MS.gene97379	MS.gene23196	PPI
MS.gene97379	MS.gene067705	PPI
MS.gene068249	MS.gene97379	PPI
MS.gene97379	MS.gene038519	PPI
MS.gene066046	MS.gene97379	PPI
MS.gene051003	MS.gene97379	PPI
MS.gene64441	MS.gene97379	PPI
MS.gene97379	MS.gene042783	PPI
MS.gene30176	MS.gene97379	PPI
MS.gene89986	MS.gene97379	PPI
MS.gene97379	MS.gene30174	PPI
MS.gene97379	MS.gene26021	PPI
MS.gene97379	MS.gene050456	PPI
MS.gene97379	MS.gene51258	PPI
MS.gene22482	MS.gene97379	PPI
MS.gene97379	MS.gene053363	PPI
MS.gene97379	MS.gene91775	PPI
MS.gene061932	MS.gene97379	PPI
MS.gene97379	MS.gene25515	PPI
MS.gene97379	MS.gene34651	PPI
MS.gene24922	MS.gene97379	PPI
MS.gene97379	MS.gene32726	PPI
MS.gene066467	MS.gene97379	PPI
MS.gene47479	MS.gene97379	PPI
MS.gene21734	MS.gene97379	PPI
MS.gene97379	MS.gene050270	PPI
MS.gene97379	MS.gene052956	PPI
MS.gene97379	MS.gene60920	PPI
MS.gene97379	MS.gene73119	PPI
MS.gene008767	MS.gene97379	PPI
MS.gene97379	MS.gene92243	PPI
MS.gene97379	MS.gene34009	PPI
MS.gene97379	MS.gene018518	PPI
MS.gene97379	MS.gene043662	PPI
MS.gene97379	MS.gene065848	PPI
MS.gene97379	MS.gene004844	PPI
MS.gene97379	MS.gene99588	PPI
MS.gene36842	MS.gene97379	PPI
MS.gene97379	MS.gene21888	PPI
MS.gene97379	MS.gene54764	PPI
MS.gene99554	MS.gene97379	PPI
MS.gene058128	MS.gene97379	PPI
MS.gene97379	MS.gene27223	PPI
MS.gene41291	MS.gene97379	PPI
MS.gene97379	MS.gene39623	PPI
MS.gene066501	MS.gene97379	PPI
MS.gene97379	MS.gene25024	PPI
MS.gene63085	MS.gene97379	PPI
MS.gene97379	MS.gene26019	PPI
MS.gene056455	MS.gene97379	PPI
MS.gene97379	MS.gene022109	PPI
MS.gene97379	MS.gene050272	PPI
MS.gene97379	MS.gene65775	PPI
MS.gene97379	MS.gene32723	PPI
MS.gene97379	MS.gene80163	PPI
MS.gene97379	MS.gene02469	PPI
MS.gene039682	MS.gene97379	PPI
MS.gene97379	MS.gene045937	PPI
MS.gene26532	MS.gene97379	PPI
MS.gene042783	MS.gene97379	PPI
MS.gene97379	MS.gene71122	PPI
MS.gene97379	MS.gene51278	PPI
MS.gene97379	MS.gene85534	PPI
MS.gene71204	MS.gene97379	PPI
MS.gene30172	MS.gene97379	PPI

Query id	Subject id	identity %	alignment length	mismatches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
MS.gene97379.t1	MTR_3g016210	77.528	356	28	3	6	309	1	356	0.0	538
MS.gene97379.t1	MTR_8g072510	64.516	341	84	1	6	309	1	341	4.80e-149	426
MS.gene97379.t1	MTR_8g039620	60.058	343	97	2	7	309	6	348	3.15e-137	395
MS.gene97379.t1	MTR_8g062410	61.224	343	87	5	6	309	1	336	2.24e-135	391
MS.gene97379.t1	MTR_8g073260	57.267	344	107	3	6	311	1	342	2.69e-134	389
MS.gene97379.t1	MTR_7g021090	57.941	340	99	4	8	309	2	335	6.36e-131	379
MS.gene97379.t1	MTR_1g059930	60.290	345	99	2	5	311	2	346	1.11e-130	379
MS.gene97379.t1	MTR_8g068990	54.955	333	120	4	5	309	2	332	6.81e-119	350
MS.gene97379.t1	MTR_7g451420	56.913	311	97	1	8	281	2	312	2.86e-117	340
MS.gene97379.t1	MTR_8g069880	54.867	339	114	3	11	311	3	340	2.14e-113	336
MS.gene97379.t1	MTR_8g066670	55.814	344	112	4	4	309	1065	1406	1.90e-110	350
MS.gene97379.t1	MTR_8g467780	53.043	345	114	4	15	311	11	355	8.93e-107	318
MS.gene97379.t1	MTR_8g040930	53.925	293	95	2	57	309	1	293	1.48e-101	303
MS.gene97379.t1	MTR_8g041240	53.925	293	95	2	57	309	1	293	1.48e-101	303
MS.gene97379.t1	MTR_3g105650	42.903	310	132	3	13	278	3	311	7.71e-79	246
MS.gene97379.t1	MTR_8g073275	40.947	359	98	7	57	311	1	349	3.42e-71	227
MS.gene97379.t1	MTR_1g069110	29.524	315	158	9	22	293	25	318	1.29e-26	109
MS.gene97379.t1	MTR_7g099580	28.214	280	159	9	27	287	24	280	2.76e-21	92.8
MS.gene97379.t1	MTR_7g099570	29.108	213	134	6	18	221	12	216	2.27e-15	77.0
MS.gene97379.t1	MTR_2g101320	24.896	241	149	7	15	235	142	370	3.49e-15	76.3
MS.gene97379.t1	MTR_2g096190	24.013	304	190	9	1	277	91	380	2.21e-14	73.9
MS.gene97379.t1	MTR_4g062100	25.243	309	180	10	1	277	95	384	2.69e-14	73.6
MS.gene97379.t1	MTR_5g085500	30.128	156	94	5	50	198	8	155	5.15e-14	72.8
MS.gene97379.t1	MTR_2g101310	27.468	233	136	9	15	226	142	362	1.01e-13	72.0
MS.gene97379.t1	MTR_2g101310	27.468	233	136	9	15	226	142	362	1.68e-13	71.2
MS.gene97379.t1	MTR_2g033050	28.415	183	114	6	25	200	212	384	4.43e-11	63.5
MS.gene97379.t1	MTR_5g085480	27.536	207	124	8	25	215	256	452	7.89e-11	63.2

Query id	Subject id	identity %	alignment length	mismatches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
MS.gene97379.t1	AT4G10720	37.578	322	152	3	14	288	4	323	1.80e-66	214
MS.gene97379.t1	AT4G10720	37.578	322	152	3	14	288	4	323	6.01e-66	213
MS.gene97379.t1	AT1G14480	35.647	317	153	5	14	281	4	318	4.35e-57	190
MS.gene97379.t1	AT5G15500	34.650	329	170	4	15	298	6	334	2.08e-56	189
MS.gene97379.t1	AT1G14500	32.919	322	170	4	14	289	4	325	5.38e-55	185
MS.gene97379.t1	AT5G54620	34.314	306	157	3	14	275	4	309	1.64e-50	173
MS.gene97379.t1	AT5G54610	34.098	305	151	6	14	272	4	304	4.31e-49	169
MS.gene97379.t1	AT1G14480	30.599	317	126	6	14	281	4	275	1.29e-36	135
MS.gene97379.t1	AT5G15500	34.884	215	126	5	95	298	17	228	1.99e-29	115
MS.gene97379.t1	AT5G51160	26.692	266	158	7	49	289	49	302	1.57e-22	97.4
MS.gene97379.t1	AT4G03460	27.536	276	157	8	18	278	239	486	1.13e-16	80.9
MS.gene97379.t1	AT4G03460	27.536	276	157	8	18	278	207	454	1.51e-16	80.5
MS.gene97379.t1	AT4G03450	25.362	276	170	7	18	278	230	484	1.15e-14	74.7
MS.gene97379.t1	AT4G03450	25.362	276	170	7	18	278	230	484	1.92e-14	74.3
MS.gene97379.t1	AT1G10340	26.394	269	153	8	49	281	173	432	5.50e-14	72.8
MS.gene97379.t1	AT1G10340	26.394	269	153	8	49	281	169	428	5.79e-14	72.8
MS.gene97379.t1	AT4G03490	27.875	287	154	12	15	278	211	467	1.14e-12	68.9
MS.gene97379.t1	AT4G03490	27.875	287	154	12	15	278	201	457	1.54e-12	68.6
MS.gene97379.t1	AT4G03490	27.875	287	154	12	15	278	211	467	1.81e-12	68.2
MS.gene97379.t1	AT5G54700	27.027	222	125	8	77	293	27	216	2.73e-12	67.0
MS.gene97379.t1	AT4G03480	24.286	280	175	8	15	278	360	618	3.33e-12	67.4
MS.gene97379.t1	AT4G03480	24.286	280	175	8	15	278	357	615	3.60e-12	67.4
MS.gene97379.t1	AT1G34050	24.436	266	144	9	47	281	184	423	9.82e-12	65.9
MS.gene97379.t1	AT1G07710	25.987	304	173	11	6	277	96	379	5.19e-11	63.5
MS.gene97379.t1	AT1G07710	25.987	304	173	11	6	277	96	379	5.19e-11	63.5

Find 61 sgRNAs with CRISPR-Local

Find 87 sgRNAs with CRISPR-GE

CRISPR-Local

CRISPR-Local
sgRNA_sequence	on_target_score	Position	Region
TAAATCAAATACTTCGTTTA+TGG	0.103857	3.1:+10514440	MS.gene97379:CDS
TCAAGATGATCCATTCATTT+TGG	0.177439	3.1:+10513590	MS.gene97379:CDS
TTTGCATATTGCTGCATCTA+TGG	0.193758	3.1:+10513647	MS.gene97379:CDS
AAATCAAATACTTCGTTTAT+GGG	0.280423	3.1:+10514441	MS.gene97379:CDS
TCATAATCTCGGAGGCAAAT+TGG	0.327443	3.1:-10513677	None:intergenic
CCTTTGATATATCGTTTCTA+AGG	0.339894	3.1:-10514488	None:intergenic
CCCTTCAAGTGCTTCTCGGC+TGG	0.361002	3.1:+10513986	MS.gene97379:CDS
TGTGGAAGAAATAGTAGAAT+TGG	0.372270	3.1:-10514637	None:intergenic
AACATGAATAGCACAAATAA+TGG	0.374381	3.1:+10513510	MS.gene97379:CDS
TCCTAGTCTTTATCAACAAT+TGG	0.376880	3.1:-10514278	None:intergenic
CATCTTGAATTACTGTATAA+AGG	0.378164	3.1:-10513575	None:intergenic
AGTTAAAACCTTCATTTGCT+TGG	0.391509	3.1:+10513700	MS.gene97379:CDS
CACAGGAAATGCTGGGAAAT+CGG	0.392479	3.1:+10514656	MS.gene97379:CDS
TGTTGCCATTCTCATCCTCC+TGG	0.417992	3.1:-10514062	None:intergenic
TCCACCGGGTGGAGTATATC+AGG	0.420465	3.1:+10514578	MS.gene97379:CDS
ATTTCTTCCACAGGAAATGC+TGG	0.421561	3.1:+10514648	MS.gene97379:CDS
TGCAAAGGAGTTTCAACAAA+TGG	0.440241	3.1:-10513630	None:intergenic
AAATTTGTGCGCGAAGAACT+TGG	0.444326	3.1:+10514302	MS.gene97379:CDS
GTCAAGTATTCAATAGATTC+CGG	0.450565	3.1:-10513910	None:intergenic
TTGCATATTGCTGCATCTAT+GGG	0.452667	3.1:+10513648	MS.gene97379:CDS
ATGTGCAAGTGTGGGTGTAT+TGG	0.453819	3.1:-10514412	None:intergenic
TGCAACCGCCACCTTTCAAT+CGG	0.461236	3.1:+10514548	MS.gene97379:CDS
TCTATCATCTCCAAAATGAA+TGG	0.461946	3.1:-10513600	None:intergenic
TTGAAAGTTGCAGCTGAAGC+AGG	0.483184	3.1:+10513540	MS.gene97379:CDS
GAGGCCCTTCAAGTGCTTCT+CGG	0.483341	3.1:+10513982	MS.gene97379:CDS
TTTAGTTTCCAAGCAAATGA+AGG	0.485832	3.1:-10513708	None:intergenic
CTTCAGCTGCAACTTTCAAT+CGG	0.493113	3.1:-10513536	None:intergenic
GCCAGCCGAGAAGCACTTGA+AGG	0.495753	3.1:-10513987	None:intergenic
TCAATCGGCAATGTCTCCAC+CGG	0.497256	3.1:+10514563	MS.gene97379:CDS
GTATTGGTGACTTCCGAGCT+AGG	0.510661	3.1:-10514396	None:intergenic
AAAGTGTTACTTTATTTAGT+CGG	0.515772	3.1:+10514465	MS.gene97379:CDS
CAAAGGAGCAACACAACACT+TGG	0.524285	3.1:+10514505	MS.gene97379:CDS
TTTAAATTTATGTGCAAGTG+TGG	0.525438	3.1:-10514421	None:intergenic
AAGAGTATATTATTAAGTGT+TGG	0.527914	3.1:+10514366	MS.gene97379:CDS
AATTCTACTATTTCTTCCAC+AGG	0.534130	3.1:+10514639	MS.gene97379:CDS
TTAAACCAGGAGGATGAGAA+TGG	0.553403	3.1:+10514057	MS.gene97379:CDS
TGGAGACATTGCCGATTGAA+AGG	0.557780	3.1:-10514559	None:intergenic
CCAGCCGAGAAGCACTTGAA+GGG	0.558571	3.1:-10513986	None:intergenic
CATTGCCGATTGAAAGGTGG+CGG	0.562087	3.1:-10514553	None:intergenic
TGTTGGAGCAAAACCTAGCT+CGG	0.562757	3.1:+10514383	MS.gene97379:CDS
AGCGCTAAGTAGCGACCCAC+AGG	0.570676	3.1:+10514101	MS.gene97379:CDS
TTTCTTCCACAGGAAATGCT+GGG	0.580062	3.1:+10514649	MS.gene97379:CDS
CGATTTCCCAGCATTTCCTG+TGG	0.589887	3.1:-10514655	None:intergenic
CTATTGAATACTTGACTGTG+AGG	0.590456	3.1:+10513917	MS.gene97379:CDS
CAATCGGCAATGTCTCCACC+GGG	0.594975	3.1:+10514564	MS.gene97379:CDS
CCTTAGAAACGATATATCAA+AGG	0.609897	3.1:+10514488	MS.gene97379:CDS
AACAAATAAACAAAGAGGTG+CGG	0.610952	3.1:+10514014	MS.gene97379:CDS
CTCAAAACAAATAAACAAAG+AGG	0.621738	3.1:+10514009	MS.gene97379:CDS
GCTTGGAAACTAAATCAACA+AGG	0.624515	3.1:+10513717	MS.gene97379:CDS
GAAATATAAAATATTAAACC+AGG	0.634407	3.1:+10514044	MS.gene97379:CDS
TTAAATTTATGTGCAAGTGT+GGG	0.648286	3.1:-10514420	None:intergenic
ATAGATGCAGCAATATGCAA+AGG	0.653352	3.1:-10513645	None:intergenic
TCCAATTGTTGATAAAGACT+AGG	0.670391	3.1:+10514277	MS.gene97379:CDS
AGACATTGCCGATTGAAAGG+TGG	0.670508	3.1:-10514556	None:intergenic
TCGGCAATGTCTCCACCGGG+TGG	0.675164	3.1:+10514567	MS.gene97379:CDS
TTAACCTGATATACTCCACC+CGG	0.675311	3.1:-10514582	None:intergenic
AAACAAAACATCATTAGACA+TGG	0.676970	3.1:+10514326	MS.gene97379:CDS
TAGCGCTGAAATGTGCAAGA+TGG	0.680693	3.1:-10514085	None:intergenic
ATATAAAATATTAAACCAGG+AGG	0.697517	3.1:+10514047	MS.gene97379:CDS
ACCTGATATACTCCACCCGG+TGG	0.702199	3.1:-10514579	None:intergenic
TGTTATGAATGAACAGTACG+AGG	0.707273	3.1:+10513963	MS.gene97379:CDS

CRISPR-GE

badsite warning	sgRNA_sequence	Strand	Position	Region	GC_content
!!!	AGTATTTTTTATTAATTTCA+TGG	+	chr3.1:10514242-10514261	MS.gene97379:intron	10.0%
!!	GAAATATAAAATATTAAACC+AGG	+	chr3.1:10514044-10514063	MS.gene97379:CDS	15.0%
!!	TAAATATTGTTATAGTTGAT+AGG	-	chr3.1:10514737-10514756	None:intergenic	15.0%
!!!	AAATATTGTTATAGTTGATA+GGG	-	chr3.1:10514736-10514755	None:intergenic	15.0%
!!	AAATCAAATACTTCGTTTAT+GGG	+	chr3.1:10514441-10514460	MS.gene97379:CDS	20.0%
!!	AAGAAATCGTATAAATTAGA+CGG	+	chr3.1:10514153-10514172	MS.gene97379:intron	20.0%
!!	ATAAAAAAAATGATTACCTG+TGG	-	chr3.1:10514120-10514139	None:intergenic	20.0%
!!	ATATAAAATATTAAACCAGG+AGG	+	chr3.1:10514047-10514066	MS.gene97379:CDS	20.0%
!!	TAAAAAAAATGATTACCTGT+GGG	-	chr3.1:10514119-10514138	None:intergenic	20.0%
!!	TAAATCAAATACTTCGTTTA+TGG	+	chr3.1:10514440-10514459	MS.gene97379:CDS	20.0%
!!!	AAAGTGTTACTTTATTTAGT+CGG	+	chr3.1:10514465-10514484	MS.gene97379:CDS	20.0%
!!!	AAGAGTATATTATTAAGTGT+TGG	+	chr3.1:10514366-10514385	MS.gene97379:CDS	20.0%
!	AAACAAAACATCATTAGACA+TGG	+	chr3.1:10514326-10514345	MS.gene97379:CDS	25.0%
!	AACATGAATAGCACAAATAA+TGG	+	chr3.1:10513510-10513529	MS.gene97379:CDS	25.0%
!	CATCTTGAATTACTGTATAA+AGG	-	chr3.1:10513578-10513597	None:intergenic	25.0%
!	CTCAAAACAAATAAACAAAG+AGG	+	chr3.1:10514009-10514028	MS.gene97379:CDS	25.0%
!	TTAAATTTATGTGCAAGTGT+GGG	-	chr3.1:10514423-10514442	None:intergenic	25.0%
!	TTTAAATTTATGTGCAAGTG+TGG	-	chr3.1:10514424-10514443	None:intergenic	25.0%
!!!	AGGTTTTAACTTCATAATCT+CGG	-	chr3.1:10513691-10513710	None:intergenic	25.0%
	AACAAATAAACAAAGAGGTG+CGG	+	chr3.1:10514014-10514033	MS.gene97379:CDS	30.0%
	AACATATTGAAATAAGCTCC+TGG	-	chr3.1:10514687-10514706	None:intergenic	30.0%
	AATCGTATAAATTAGACGGA+TGG	+	chr3.1:10514157-10514176	MS.gene97379:intron	30.0%
	AGTTAAAACCTTCATTTGCT+TGG	+	chr3.1:10513700-10513719	MS.gene97379:CDS	30.0%
	CCTTAGAAACGATATATCAA+AGG	+	chr3.1:10514488-10514507	MS.gene97379:CDS	30.0%
	CCTTTGATATATCGTTTCTA+AGG	-	chr3.1:10514491-10514510	None:intergenic	30.0%
	GCAAAACAACCAAAAAAGTA+TGG	+	chr3.1:10513764-10513783	MS.gene97379:intron	30.0%
	GTCAAGTATTCAATAGATTC+CGG	-	chr3.1:10513913-10513932	None:intergenic	30.0%
	TATAAATTAGACGGATGGTT+TGG	+	chr3.1:10514162-10514181	MS.gene97379:intron	30.0%
	TATTAATTTCATGGTAGCAC+AGG	+	chr3.1:10514251-10514270	MS.gene97379:intron	30.0%
	TCTATCATCTCCAAAATGAA+TGG	-	chr3.1:10513603-10513622	None:intergenic	30.0%
	TGTGGAAGAAATAGTAGAAT+TGG	-	chr3.1:10514640-10514659	None:intergenic	30.0%
!	AATTCTACTATTTCTTCCAC+AGG	+	chr3.1:10514639-10514658	MS.gene97379:CDS	30.0%
!	CTTCATTTTGCAAGTCAAAT+TGG	+	chr3.1:10513850-10513869	MS.gene97379:intron	30.0%
!	TAATTTTCTCTTTGCTTGTC+CGG	+	chr3.1:10513891-10513910	MS.gene97379:CDS	30.0%
!	TCAAGATGATCCATTCATTT+TGG	+	chr3.1:10513590-10513609	MS.gene97379:CDS	30.0%
!	TCCAATTGTTGATAAAGACT+AGG	+	chr3.1:10514277-10514296	MS.gene97379:CDS	30.0%
!	TCCTAGTCTTTATCAACAAT+TGG	-	chr3.1:10514281-10514300	None:intergenic	30.0%
!	TTTAGTTTCCAAGCAAATGA+AGG	-	chr3.1:10513711-10513730	None:intergenic	30.0%
!!	ATTTGACTTGCAAAATGAAG+AGG	-	chr3.1:10513850-10513869	None:intergenic	30.0%
!!!	TTTTAACTTCATAATCTCGG+AGG	-	chr3.1:10513688-10513707	None:intergenic	30.0%
	ATAGATGCAGCAATATGCAA+AGG	-	chr3.1:10513648-10513667	None:intergenic	35.0%
	ATATTTATTCTGATCCCAGC+TGG	+	chr3.1:10514750-10514769	MS.gene97379:intron	35.0%
	CTATTGAATACTTGACTGTG+AGG	+	chr3.1:10513917-10513936	MS.gene97379:CDS	35.0%
	GCTTGGAAACTAAATCAACA+AGG	+	chr3.1:10513717-10513736	MS.gene97379:CDS	35.0%
	GTTAGAGTTGAAGGAAGAAA+TGG	+	chr3.1:10513819-10513838	MS.gene97379:intron	35.0%
	TCGCTTTGTGAACTTCAATA+AGG	+	chr3.1:10513791-10513810	MS.gene97379:intron	35.0%
	TGCAAAGGAGTTTCAACAAA+TGG	-	chr3.1:10513633-10513652	None:intergenic	35.0%
	TGTTATGAATGAACAGTACG+AGG	+	chr3.1:10513963-10513982	MS.gene97379:CDS	35.0%
	TTCTTCCTTCAACTCTAACA+AGG	-	chr3.1:10513818-10513837	None:intergenic	35.0%
	TTGCATATTGCTGCATCTAT+GGG	+	chr3.1:10513648-10513667	MS.gene97379:CDS	35.0%
	TTTGCATATTGCTGCATCTA+TGG	+	chr3.1:10513647-10513666	MS.gene97379:CDS	35.0%
!	TTTTGCATAGCAAGATGGAT+AGG	-	chr3.1:10513750-10513769	None:intergenic	35.0%
!!!	AGCGAGTAACCATACTTTTT+TGG	-	chr3.1:10513776-10513795	None:intergenic	35.0%
	AAATTTGTGCGCGAAGAACT+TGG	+	chr3.1:10514302-10514321	MS.gene97379:CDS	40.0%
	AAGGACCTTGTTAGAGTTGA+AGG	+	chr3.1:10513810-10513829	MS.gene97379:intron	40.0%
	ATTTCTTCCACAGGAAATGC+TGG	+	chr3.1:10514648-10514667	MS.gene97379:CDS	40.0%
	CTTCAGCTGCAACTTTCAAT+CGG	-	chr3.1:10513539-10513558	None:intergenic	40.0%
	TCATAATCTCGGAGGCAAAT+TGG	-	chr3.1:10513680-10513699	None:intergenic	40.0%
	TTAAACCAGGAGGATGAGAA+TGG	+	chr3.1:10514057-10514076	MS.gene97379:CDS	40.0%
	TTAACCTGATATACTCCACC+CGG	-	chr3.1:10514585-10514604	None:intergenic	40.0%
	TTTCTTCCACAGGAAATGCT+GGG	+	chr3.1:10514649-10514668	MS.gene97379:CDS	40.0%
!!	GGTTGTTTTGCATAGCAAGA+TGG	-	chr3.1:10513755-10513774	None:intergenic	40.0%
	ATGTGCAAGTGTGGGTGTAT+TGG	-	chr3.1:10514415-10514434	None:intergenic	45.0%
	CAAAGGAGCAACACAACACT+TGG	+	chr3.1:10514505-10514524	MS.gene97379:CDS	45.0%
	CACAGGAAATGCTGGGAAAT+CGG	+	chr3.1:10514656-10514675	MS.gene97379:CDS	45.0%
	TGTTGGAGCAAAACCTAGCT+CGG	+	chr3.1:10514383-10514402	MS.gene97379:CDS	45.0%
	TTGAAAGTTGCAGCTGAAGC+AGG	+	chr3.1:10513540-10513559	MS.gene97379:CDS	45.0%
	TTTATTCTGATCCCAGCTGG+TGG	+	chr3.1:10514753-10514772	MS.gene97379:intron	45.0%
!	AGACATTGCCGATTGAAAGG+TGG	-	chr3.1:10514559-10514578	None:intergenic	45.0%
!	TAGCGCTGAAATGTGCAAGA+TGG	-	chr3.1:10514088-10514107	None:intergenic	45.0%
!	TGGAGACATTGCCGATTGAA+AGG	-	chr3.1:10514562-10514581	None:intergenic	45.0%
	CGATTTCCCAGCATTTCCTG+TGG	-	chr3.1:10514658-10514677	None:intergenic	50.0%
	TCAATCGGCAATGTCTCCAC+CGG	+	chr3.1:10514563-10514582	MS.gene97379:CDS	50.0%
	TGCAACCGCCACCTTTCAAT+CGG	+	chr3.1:10514548-10514567	MS.gene97379:CDS	50.0%
	TGTTGCCATTCTCATCCTCC+TGG	-	chr3.1:10514065-10514084	None:intergenic	50.0%
!	CATTGCCGATTGAAAGGTGG+CGG	-	chr3.1:10514556-10514575	None:intergenic	50.0%
!	GTATTGGTGACTTCCGAGCT+AGG	-	chr3.1:10514399-10514418	None:intergenic	50.0%
	ACCTGATATACTCCACCCGG+TGG	-	chr3.1:10514582-10514601	None:intergenic	55.0%
	CAATCGGCAATGTCTCCACC+GGG	+	chr3.1:10514564-10514583	MS.gene97379:CDS	55.0%
	GAGGCCCTTCAAGTGCTTCT+CGG	+	chr3.1:10513982-10514001	MS.gene97379:CDS	55.0%
	TCCACCGGGTGGAGTATATC+AGG	+	chr3.1:10514578-10514597	MS.gene97379:CDS	55.0%
!!	CCAGCCGAGAAGCACTTGAA+GGG	-	chr3.1:10513989-10514008	None:intergenic	55.0%
	AGCGCTAAGTAGCGACCCAC+AGG	+	chr3.1:10514101-10514120	MS.gene97379:CDS	60.0%
	CCCTTCAAGTGCTTCTCGGC+TGG	+	chr3.1:10513986-10514005	MS.gene97379:CDS	60.0%
	GCTGGGAAATCGGTCTTGCC+AGG	+	chr3.1:10514666-10514685	MS.gene97379:intron	60.0%
!!	GCCAGCCGAGAAGCACTTGA+AGG	-	chr3.1:10513990-10514009	None:intergenic	60.0%
	TCGGCAATGTCTCCACCGGG+TGG	+	chr3.1:10514567-10514586	MS.gene97379:CDS	65.0%

Chromosome	Type	Strat	End	Strand	Name
chr3.1	gene	10513498	10514783	10513498	ID=MS.gene97379
chr3.1	mRNA	10513498	10514783	10513498	ID=MS.gene97379.t1;Parent=MS.gene97379
chr3.1	exon	10513498	10513780	10513498	ID=MS.gene97379.t1.exon1;Parent=MS.gene97379.t1
chr3.1	CDS	10513498	10513780	10513498	ID=cds.MS.gene97379.t1;Parent=MS.gene97379.t1
chr3.1	exon	10513890	10514122	10513890	ID=MS.gene97379.t1.exon2;Parent=MS.gene97379.t1
chr3.1	CDS	10513890	10514122	10513890	ID=cds.MS.gene97379.t1;Parent=MS.gene97379.t1
chr3.1	exon	10514273	10514677	10514273	ID=MS.gene97379.t1.exon3;Parent=MS.gene97379.t1
chr3.1	CDS	10514273	10514677	10514273	ID=cds.MS.gene97379.t1;Parent=MS.gene97379.t1
chr3.1	exon	10514769	10514783	10514769	ID=MS.gene97379.t1.exon4;Parent=MS.gene97379.t1
chr3.1	CDS	10514769	10514783	10514769	ID=cds.MS.gene97379.t1;Parent=MS.gene97379.t1

Gene Sequence

>MS.gene97379

ATGAGTGCTTCAAACATGAATAGCACAAATAATGGTGACCGATTGAAAGTTGCAGCTGAAGCAGGTGATATAGATCTCCTTTATACAGTAATTCAAGATGATCCATTCATTTTGGAGATGATAGATTTAATACCATTTGTTGAAACTCCTTTGCATATTGCTGCATCTATGGGTCATCTCCAATTTGCCTCCGAGATTATGAAGTTAAAACCTTCATTTGCTTGGAAACTAAATCAACAAGGATTCAGTCCTATCCATCTTGCTATGCAAAACAACCAAAAAAGTATGGTTACTCGCTTTGTGAACTTCAATAAGGACCTTGTTAGAGTTGAAGGAAGAAATGGCATCTCCTCTTCATTTTGCAAGTCAAATTGGTGAAGTTGAACTTTTAGCTAATTTTCTCTTTGCTTGTCCGGAATCTATTGAATACTTGACTGTGAGGTTTGAGACAGCATTGCATATTGCTGTTATGAATGAACAGTACGAGGCCCTTCAAGTGCTTCTCGGCTGGCTCAAAACAAATAAACAAAGAGGTGCGGATTTGCTGAAATATAAAATATTAAACCAGGAGGATGAGAATGGCAACACCATCTTGCACATTTCAGCGCTAAGTAGCGACCCACAGGTAATCATTTTTTTTATTTGAAGAACACGAAAGAAATCGTATAAATTAGACGGATGGTTTGGATTTAGCACACTAAATTTGTAGATTTTTAGTTGCTAATTTGAATGATCTCTAACAACAGTATTTTTTATTAATTTCATGGTAGCACAGGCGCTCCAATTGTTGATAAAGACTAGGATAAATTTGTGCGCGAAGAACTTGGAAAACAAAACATCATTAGACATGGCAGTCACTAGAGAGATCAAGAGTATATTATTAAGTGTTGGAGCAAAACCTAGCTCGGAAGTCACCAATACACCCACACTTGCACATAAATTTAAATCAAATACTTCGTTTATGGGTAAAGTGTTACTTTATTTAGTCGGCCTTAGAAACGATATATCAAAGGAGCAACACAACACTTGGTTGATAGTTGCGACTCTTGTTGCAACCGCCACCTTTCAATCGGCAATGTCTCCACCGGGTGGAGTATATCAGGTTAATGCTAGTGACAGTAGTTTGAACATCACTTCAGCCAATTCTACTATTTCTTCCACAGGAAATGCTGGGAAATCGGTCTTGCCAGGAGCTTATTTCAATATGTTTATATATCTGAATATGCTATCTTTTTCCCTATCAACTATAACAATATTTATTCTGATCCCAGCTGGTGGAAGATTAA

Protein sequence

>MS.gene97379.t1

MSASNMNSTNNGDRLKVAAEAGDIDLLYTVIQDDPFILEMIDLIPFVETPLHIAASMGHLQFASEIMKLKPSFAWKLNQQGFSPIHLAMQNNQKTNFLFACPESIEYLTVRFETALHIAVMNEQYEALQVLLGWLKTNKQRGADLLKYKILNQEDENGNTILHISALSSDPQALQLLIKTRINLCAKNLENKTSLDMAVTREIKSILLSVGAKPSSEVTNTPTLAHKFKSNTSFMGKVLLYLVGLRNDISKEQHNTWLIVATLVATATFQSAMSPPGGVYQVNASDSSLNITSANSTISSTGNAGKSLVED