AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar XinJiangDaYe / MS.gene23881


Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene23881.t1 MTR_7g021090 89.664 387 38 1 1 385 1 387 0.0 712
MS.gene23881.t1 MTR_8g072510 69.841 441 115 4 3 432 4 437 0.0 617
MS.gene23881.t1 MTR_8g062410 70.213 423 122 4 3 424 4 423 0.0 582
MS.gene23881.t1 MTR_8g039620 62.326 430 147 3 1 416 1 429 0.0 528
MS.gene23881.t1 MTR_3g016210 59.633 436 152 7 3 417 4 436 5.15e-174 494
MS.gene23881.t1 MTR_1g059930 63.333 360 123 2 1 351 1 360 1.54e-156 450
MS.gene23881.t1 MTR_8g068990 59.733 375 126 5 1 364 1 361 1.58e-150 435
MS.gene23881.t1 MTR_8g069880 55.581 439 179 9 5 432 3 436 2.26e-150 435
MS.gene23881.t1 MTR_8g066670 56.979 437 178 5 1 431 1067 1499 4.85e-150 463
MS.gene23881.t1 MTR_8g073260 52.594 424 176 8 1 409 1 414 1.00e-141 413
MS.gene23881.t1 MTR_8g040930 58.667 375 140 7 51 413 1 372 1.99e-140 407
MS.gene23881.t1 MTR_8g041240 58.667 375 140 7 51 413 1 372 1.99e-140 407
MS.gene23881.t1 MTR_7g451420 63.407 317 100 2 1 306 1 312 2.44e-135 392
MS.gene23881.t1 MTR_8g467780 48.506 435 208 3 8 426 10 444 1.90e-129 382
MS.gene23881.t1 MTR_3g105650 42.424 429 202 7 7 417 3 404 1.80e-108 327
MS.gene23881.t1 MTR_8g073275 41.084 443 160 12 51 409 1 426 4.71e-87 273
MS.gene23881.t1 MTR_1g069110 24.694 409 264 9 7 395 16 400 2.86e-30 122
MS.gene23881.t1 MTR_7g099580 25.000 304 183 8 8 306 11 274 6.03e-25 105
MS.gene23881.t1 MTR_2g101320 27.686 242 148 5 40 264 137 368 1.64e-22 100
MS.gene23881.t1 MTR_7g099570 29.756 205 127 4 9 208 9 201 1.68e-21 97.4
MS.gene23881.t1 MTR_2g101310 27.801 241 148 5 40 264 137 367 2.68e-20 94.0
MS.gene23881.t1 MTR_2g101310 27.801 241 148 5 40 264 137 367 4.89e-20 92.8
MS.gene23881.t1 MTR_7g117620 28.959 221 141 3 44 260 119 327 5.62e-18 86.7
MS.gene23881.t1 MTR_1g115575 23.077 416 242 13 44 412 169 553 1.76e-15 79.0
MS.gene23881.t1 MTR_5g085500 31.646 158 94 4 78 230 8 156 3.30e-15 77.8
MS.gene23881.t1 MTR_7g100390 24.812 399 231 13 1 355 30 403 4.19e-15 77.8
MS.gene23881.t1 MTR_1g032100 25.481 208 135 3 45 244 95 290 8.99e-14 73.6
MS.gene23881.t1 MTR_2g033050 28.729 181 117 5 55 231 212 384 1.22e-13 72.8
MS.gene23881.t1 MTR_8g105260 27.778 216 134 5 44 250 101 303 1.92e-13 72.4
MS.gene23881.t1 MTR_4g062100 25.000 216 146 3 45 256 109 312 2.05e-13 72.4
MS.gene23881.t1 MTR_7g100430 25.882 170 111 3 42 209 124 280 2.64e-11 65.9
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene23881.t1 AT4G10720 39.286 420 218 9 8 405 4 408 1.72e-85 268
MS.gene23881.t1 AT5G15500 39.362 376 203 7 9 370 6 370 1.03e-80 256
MS.gene23881.t1 AT4G10720 42.812 320 169 4 8 313 4 323 7.31e-80 253
MS.gene23881.t1 AT1G14500 34.346 428 228 8 8 409 4 404 2.27e-79 253
MS.gene23881.t1 AT1G14480 34.803 431 225 10 8 408 4 408 2.62e-77 247
MS.gene23881.t1 AT5G54620 39.806 309 169 5 7 300 3 309 6.75e-65 214
MS.gene23881.t1 AT5G54610 37.540 309 166 6 8 297 4 304 9.39e-59 198
MS.gene23881.t1 AT1G14480 32.530 415 213 11 8 408 4 365 2.20e-58 197
MS.gene23881.t1 AT5G15500 33.455 275 158 7 110 370 1 264 1.43e-36 137
MS.gene23881.t1 AT5G51160 27.473 364 226 7 63 396 35 390 5.93e-32 126
MS.gene23881.t1 AT5G54700 25.085 295 185 8 101 392 23 284 4.82e-18 85.5
MS.gene23881.t1 AT4G03450 23.896 385 214 9 11 380 229 549 2.30e-17 85.1
MS.gene23881.t1 AT4G03450 24.416 385 212 10 11 380 229 549 2.37e-17 85.1
MS.gene23881.t1 AT5G54700 24.147 381 198 12 24 392 20 321 3.41e-17 84.0
MS.gene23881.t1 AT4G03460 26.038 265 162 7 100 358 290 526 5.27e-17 84.0
MS.gene23881.t1 AT4G03460 26.038 265 162 7 100 358 258 494 5.81e-17 83.6
MS.gene23881.t1 AT4G03480 23.913 368 198 12 9 362 357 656 9.20e-16 80.1
MS.gene23881.t1 AT4G03480 23.913 368 198 12 9 362 360 659 9.65e-16 80.1
MS.gene23881.t1 AT1G34050 23.282 262 169 6 65 306 174 423 1.38e-15 79.3
MS.gene23881.t1 AT2G01680 26.316 209 134 3 44 244 97 293 2.64e-15 78.6
MS.gene23881.t1 AT4G03500 22.667 375 198 10 9 303 117 479 1.06e-14 76.6
MS.gene23881.t1 AT4G03500 22.667 375 198 10 9 303 117 479 1.06e-14 76.6
MS.gene23881.t1 AT1G10340 22.573 443 272 12 2 401 102 516 1.14e-14 76.6
MS.gene23881.t1 AT4G03500 22.667 375 198 10 9 303 140 502 1.19e-14 76.6
MS.gene23881.t1 AT4G03490 25.581 301 174 9 9 303 201 457 1.33e-14 76.3
MS.gene23881.t1 AT4G03490 25.581 301 174 9 9 303 211 467 1.46e-14 76.3
MS.gene23881.t1 AT1G10340 22.466 365 222 9 79 401 175 520 1.95e-14 75.9
MS.gene23881.t1 AT4G03490 25.581 301 174 9 9 303 211 467 2.01e-14 75.9
MS.gene23881.t1 AT3G12360 23.040 421 236 15 44 412 155 539 7.65e-14 73.9
MS.gene23881.t1 AT3G12360 23.753 421 233 15 44 412 167 551 8.06e-14 73.9
MS.gene23881.t1 AT5G54710 23.819 487 280 20 2 416 144 611 2.10e-13 72.8
MS.gene23881.t1 AT5G54710 23.819 487 280 20 2 416 99 566 2.18e-13 72.4
MS.gene23881.t1 AT1G03670 24.468 282 177 6 88 364 266 516 2.42e-13 72.4
MS.gene23881.t1 AT4G03470 23.003 313 196 6 60 364 289 564 5.84e-13 71.2
MS.gene23881.t1 AT3G09550 23.235 340 203 10 12 317 157 472 8.03e-13 70.9
MS.gene23881.t1 AT3G09550 23.235 340 203 10 12 317 150 465 9.02e-13 70.9
MS.gene23881.t1 AT3G09550 23.235 340 203 10 12 317 150 465 9.02e-13 70.9
MS.gene23881.t1 AT5G02620 25.743 202 134 3 45 242 95 284 1.20e-12 70.1
MS.gene23881.t1 AT5G02620 25.743 202 134 3 45 242 95 284 1.20e-12 70.1
MS.gene23881.t1 AT5G02620 25.743 202 134 3 45 242 95 284 1.20e-12 70.1
MS.gene23881.t1 AT1G05640 29.756 205 126 5 44 243 191 382 2.83e-12 69.3
MS.gene23881.t1 AT2G31820 21.149 435 265 13 44 428 227 633 7.40e-12 67.8
MS.gene23881.t1 AT1G07710 22.222 360 228 8 2 327 63 404 5.76e-11 65.1
MS.gene23881.t1 AT1G07710 22.222 360 228 8 2 327 63 404 5.76e-11 65.1
MS.gene23881.t1 AT4G14390 23.443 273 186 6 41 303 264 523 7.49e-11 64.7
MS.gene23881.t1 AT4G14390 23.443 273 186 6 41 303 283 542 8.01e-11 64.7

Find 89 sgRNAs with CRISPR-Local

Find 294 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
AAAGACCTTGTTAGAATTAA+AGG 0.120242 7.1:-77328819 MS.gene23881:CDS
TCATAATTTCAGTAGCAAAT+TGG 0.281833 7.1:+77328952 None:intergenic
TGAGGATGATCCATTCATTC+TGG 0.307992 7.1:-77329039 MS.gene23881:CDS
TCCTCCTGGTGGAATTTATC+AGG 0.309153 7.1:-77324920 MS.gene23881:CDS
ACTGATTTCCCAGCATTTCC+TGG 0.327849 7.1:+77324838 None:intergenic
AATCATAGCAATATATCTTA+TGG 0.353839 7.1:-77324755 MS.gene23881:CDS
TCAAACATGAACACAAATAA+TGG 0.376129 7.1:-77329119 None:intergenic
TGAATAACATACTCTTGATC+TGG 0.381575 7.1:+77325121 None:intergenic
GAGGCCCTTCAAGTACTTGT+TGG 0.390678 7.1:-77328645 MS.gene23881:CDS
TAGTGCTGAAATATGCAAAA+TGG 0.398549 7.1:+77328542 None:intergenic
CCCTTCAAGTACTTGTTGGC+TGG 0.409768 7.1:-77328641 MS.gene23881:CDS
GTCAAGTATTCAATGGATTC+CGG 0.412377 7.1:+77328717 None:intergenic
TGCAAAATGAAGAGGAGTTA+TGG 0.420767 7.1:+77328788 None:intergenic
GCTATGATTGATACAGTAAA+GGG 0.421350 7.1:+77324769 None:intergenic
TTTACATATCGCTGCAGCTA+TGG 0.430252 7.1:-77328982 MS.gene23881:CDS
TTTCTAGTGGCTTCTCCAGT+GGG 0.433022 7.1:-77324709 MS.gene23881:CDS
AGCGATAAACCAGACGTTTG+TGG 0.433961 7.1:+77328856 None:intergenic
GGATGGGGCTGAATCCTTGC+GGG 0.440119 7.1:+77328898 None:intergenic
CTAGTTATTTATTTAATATG+TGG 0.446543 7.1:-77324675 MS.gene23881:CDS
AAAATTGAACTTAATGAACT+TGG 0.446815 7.1:-77325178 MS.gene23881:CDS
TGTAAAGGAGTTTCAACAAA+TGG 0.448723 7.1:+77328999 None:intergenic
ATTTCTGCTCCAGGAAATGC+TGG 0.448740 7.1:-77324847 MS.gene23881:CDS
AGCAGAAATAGTAGAATTTG+AGG 0.449797 7.1:+77324861 None:intergenic
CGTTGAAACCATCATTTGCT+TGG 0.451045 7.1:-77328929 MS.gene23881:CDS
CTAAAAGCTGCAGCTCAAGC+AGG 0.453056 7.1:-77329089 MS.gene23881:CDS
CTTGCACATAGGTTCAAGAT+TGG 0.454814 7.1:-77325054 MS.gene23881:CDS
TCTATATGATCCAGAATGAA+TGG 0.457800 7.1:+77329029 None:intergenic
ACTCAATCCTGATTGATAGA+TGG 0.467142 7.1:+77324942 None:intergenic
GCAACTGCCATCTATCAATC+AGG 0.473264 7.1:-77324949 MS.gene23881:CDS
GCCAGCCAACAAGTACTTGA+AGG 0.473494 7.1:+77328640 None:intergenic
AGCGATAGGTGCGCAAAAGC+TGG 0.477050 7.1:-77328604 MS.gene23881:CDS
GCTGGGAAATCAGTCTTGTC+AGG 0.477588 7.1:-77324829 MS.gene23881:CDS
TAAATTTCTCAAGTTGTGTC+CGG 0.481016 7.1:-77328736 MS.gene23881:CDS
CTCTTCCTTTAATTCTAACA+AGG 0.482377 7.1:+77328814 None:intergenic
AGCACAGGCAGTTCAATTGT+TGG 0.483372 7.1:-77325214 MS.gene23881:intron
AATTCTACTATTTCTGCTCC+AGG 0.488070 7.1:-77324856 MS.gene23881:CDS
TGCTATGATTGATACAGTAA+AGG 0.488511 7.1:+77324768 None:intergenic
TATTAAGAATCAACAATTTG+AGG 0.490260 7.1:-77328664 MS.gene23881:CDS
TAGTGGCTTCTCCAGTGGGT+TGG 0.490670 7.1:-77324705 MS.gene23881:CDS
AAGAGTATGTTATTCAGAGT+TGG 0.492729 7.1:-77325114 MS.gene23881:CDS
CAATCAGGATTGAGTCCTCC+TGG 0.505135 7.1:-77324934 MS.gene23881:CDS
TCACGGAATTGACATGTGTA+GGG 0.505298 7.1:+77324644 None:intergenic
CCTCACAGTCAAGTATTCAA+TGG 0.507786 7.1:+77328710 None:intergenic
GAATAACATACTCTTGATCT+GGG 0.509303 7.1:+77325122 None:intergenic
CAATTATCAACCAAGTGTTA+CGG 0.509514 7.1:+77324983 None:intergenic
GTTTCTAGTGGCTTCTCCAG+TGG 0.510517 7.1:-77324710 MS.gene23881:CDS
TTAAGCTTCCAAGCAAATGA+TGG 0.511068 7.1:+77328921 None:intergenic
TTACATATCGCTGCAGCTAT+GGG 0.515755 7.1:-77328981 MS.gene23881:CDS
TGAATGGTGTCTTATGCTCA+AGG 0.516218 7.1:-77324567 MS.gene23881:CDS
GCAAAACAACCACAAACGTC+TGG 0.518477 7.1:-77328865 MS.gene23881:CDS
AGCACTAGGTACTAAGCGCC+AGG 0.534377 7.1:-77328526 MS.gene23881:intron
ATTTCACTTGCAAAATGAAG+AGG 0.544959 7.1:+77328780 None:intergenic
TCTCCTCTACGCAGTAATTG+AGG 0.549163 7.1:-77329057 MS.gene23881:CDS
GTTATTTATTTAATATGTGG+AGG 0.550980 7.1:-77324672 MS.gene23881:CDS
GGAATTTATCAGGTTAGTGC+TGG 0.554753 7.1:-77324910 MS.gene23881:CDS
ATATATCTTATGGTACCAGC+AGG 0.566763 7.1:-77324745 MS.gene23881:CDS
AATATTAAACAAGAGGGATG+AGG 0.567985 7.1:-77328574 MS.gene23881:CDS
AACATCATATGTCCACCTGC+TGG 0.570024 7.1:+77324730 None:intergenic
TTAAACAAGAGGGATGAGGC+AGG 0.573840 7.1:-77328570 MS.gene23881:CDS
CAGAGGAGAACCGTAACACT+TGG 0.576139 7.1:-77324993 MS.gene23881:CDS
GCATGAGCGACTTCTAAGCT+AGG 0.583244 7.1:+77325084 None:intergenic
CTAGCGCTGAACCAACCCAC+TGG 0.583784 7.1:+77324694 None:intergenic
CTGAGAACACGTGTAGCGAT+AGG 0.584080 7.1:-77328618 MS.gene23881:CDS
AAAATCAAATATTAAACAAG+AGG 0.584655 7.1:-77328581 MS.gene23881:CDS
ATCACGGAATTGACATGTGT+AGG 0.585052 7.1:+77324643 None:intergenic
ATAGCTGCAGCGATATGTAA+AGG 0.585747 7.1:+77328984 None:intergenic
TGGATGGGGCTGAATCCTTG+CGG 0.591962 7.1:+77328897 None:intergenic
TGGACATATGATGTTTCTAG+TGG 0.594185 7.1:-77324722 MS.gene23881:CDS
TTTGCATAGCGAGATGGATG+GGG 0.598780 7.1:+77328883 None:intergenic
ATGCTCCCACACTTGCACAT+AGG 0.610300 7.1:-77325065 MS.gene23881:CDS
GGTTCAAGATTGGACGTAGA+CGG 0.612801 7.1:-77325044 MS.gene23881:CDS
GCTTGGAAGCTTAACCCGCA+AGG 0.615015 7.1:-77328912 MS.gene23881:CDS
CTTGAACCTATGTGCAAGTG+TGG 0.615826 7.1:+77325059 None:intergenic
AAATCAAATATTAAACAAGA+GGG 0.615878 7.1:-77328580 MS.gene23881:CDS
GAATGGTGTCTTATGCTCAA+GGG 0.617185 7.1:-77324566 MS.gene23881:CDS
TATCTTATGGTACCAGCAGG+TGG 0.618253 7.1:-77324742 MS.gene23881:CDS
CCAGCCAACAAGTACTTGAA+GGG 0.622327 7.1:+77328641 None:intergenic
CACGGAATTGACATGTGTAG+GGG 0.641300 7.1:+77324645 None:intergenic
CTAACCTGATAAATTCCACC+AGG 0.648952 7.1:+77324916 None:intergenic
CATCCTCAATTACTGCGTAG+AGG 0.659584 7.1:+77329054 None:intergenic
TTTCTGCTCCAGGAAATGCT+GGG 0.667897 7.1:-77324846 MS.gene23881:CDS
CCATTGAATACTTGACTGTG+AGG 0.675589 7.1:-77328710 MS.gene23881:CDS
GTTAGTGCTGGTGATGACAA+TGG 0.676683 7.1:-77324898 MS.gene23881:CDS
TCAGGATTGAGTCCTCCTGG+TGG 0.678999 7.1:-77324931 MS.gene23881:CDS
CAAAATGACGTGAATCACCA+CGG 0.686476 7.1:+77324588 None:intergenic
AATTAGAGCGAATATGACAG+AGG 0.695810 7.1:-77325010 MS.gene23881:CDS
ACCTGATAAATTCCACCAGG+AGG 0.699430 7.1:+77324919 None:intergenic
AATAACATACTCTTGATCTG+GGG 0.699856 7.1:+77325123 None:intergenic
TTGAACCTATGTGCAAGTGT+GGG 0.705991 7.1:+77325060 None:intergenic

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! AAAAAAAAAACTATAACAAA+CGG + chr7.1:77326499-77326518 None:intergenic 10.0%
!! AAAGCAAATATAAAATAAAA+AGG - chr7.1:77325654-77325673 MS.gene23881:intron 10.0%
!!! AAAAAAAGTGATTTTTATTA+CGG - chr7.1:77326776-77326795 MS.gene23881:intron 10.0%
!!! CAAAAAATAAATTTTTTTAG+AGG - chr7.1:77326661-77326680 MS.gene23881:intron 10.0%
!!! TTTGTTATAGTTTTTTTTTT+AGG - chr7.1:77326499-77326518 MS.gene23881:intron 10.0%
!!! TTTTAAAAATCTATAACAAA+CGG + chr7.1:77326578-77326597 None:intergenic 10.0%
!!! TTTTTTTCAATATTCTTAAT+GGG + chr7.1:77326041-77326060 None:intergenic 10.0%
!!! TTTTTTTTCAATATTCTTAA+TGG + chr7.1:77326042-77326061 None:intergenic 10.0%
!! AAAAAAAAACTATAACAAAC+GGG + chr7.1:77326498-77326517 None:intergenic 15.0%
!! AAAATCAAATATTAAACAAG+AGG - chr7.1:77325054-77325073 MS.gene23881:CDS 15.0%
!! AAATCAAATATTAAACAAGA+GGG - chr7.1:77325055-77325074 MS.gene23881:CDS 15.0%
!! AACAAAAGAAAAATAATATG+GGG - chr7.1:77327463-77327482 MS.gene23881:intron 15.0%
!! AATTCGTATTTGTTTATTTA+TGG + chr7.1:77327299-77327318 None:intergenic 15.0%
!! AGTTTACAATTAAAAACAAA+AGG + chr7.1:77328841-77328860 None:intergenic 15.0%
!! ATTCGTATTTGTTTATTTAT+GGG + chr7.1:77327298-77327317 None:intergenic 15.0%
!! CAACAAAAGAAAAATAATAT+GGG - chr7.1:77327462-77327481 MS.gene23881:intron 15.0%
!! CTAGTTATTTATTTAATATG+TGG - chr7.1:77328960-77328979 MS.gene23881:CDS 15.0%
!! CTTAAAACGATTATTAAAAT+GGG + chr7.1:77328272-77328291 None:intergenic 15.0%
!!! ATTTTTAAATGAGATTATGT+CGG + chr7.1:77327001-77327020 None:intergenic 15.0%
!!! TCAATTATAAAGTTCTTTTA+AGG - chr7.1:77327191-77327210 MS.gene23881:intron 15.0%
!!! TTATTTTAATCTGTAACAAA+CGG - chr7.1:77326880-77326899 MS.gene23881:intron 15.0%
!!! TTTTTTCAATATTCTTAATG+GGG + chr7.1:77326040-77326059 None:intergenic 15.0%
!! AAAAACTACGAATAAAATCA+CGG + chr7.1:77329011-77329030 None:intergenic 20.0%
!! AAAATTGAACTTAATGAACT+TGG - chr7.1:77328457-77328476 MS.gene23881:intron 20.0%
!! AAACAAAAAGAAACATGTTT+CGG + chr7.1:77327885-77327904 None:intergenic 20.0%
!! AATCATAGCAATATATCTTA+TGG - chr7.1:77328880-77328899 MS.gene23881:CDS 20.0%
!! AATGCATAAAAATTGTTATC+AGG + chr7.1:77327057-77327076 None:intergenic 20.0%
!! ATAAAATTAGAGTTGTAGAT+AGG - chr7.1:77328339-77328358 MS.gene23881:intron 20.0%
!! CCTTAAAACGATTATTAAAA+TGG + chr7.1:77328273-77328292 None:intergenic 20.0%
!! GCAACAAAAGAAAAATAATA+TGG - chr7.1:77327461-77327480 MS.gene23881:intron 20.0%
!! GTTATTTATTTAATATGTGG+AGG - chr7.1:77328963-77328982 MS.gene23881:CDS 20.0%
!! TACAATTTACAAACATTCAA+TGG + chr7.1:77326921-77326940 None:intergenic 20.0%
!! TATTAAGAATCAACAATTTG+AGG - chr7.1:77324971-77324990 MS.gene23881:CDS 20.0%
!!! CCATTTTAATAATCGTTTTA+AGG - chr7.1:77328270-77328289 MS.gene23881:intron 20.0%
!!! TATTTTAATCTGTAACAAAC+GGG - chr7.1:77326881-77326900 MS.gene23881:intron 20.0%
!!! TTTTTCAATATTCTTAATGG+GGG + chr7.1:77326039-77326058 None:intergenic 20.0%
! AAAAGGAATGAACAAAATTG+AGG - chr7.1:77325671-77325690 MS.gene23881:intron 25.0%
! AAAGAAAGAAGAGAAATAGA+GGG - chr7.1:77326063-77326082 MS.gene23881:intron 25.0%
! AAAGACCTTGTTAGAATTAA+AGG - chr7.1:77324816-77324835 MS.gene23881:CDS 25.0%
! AAAGATATATCAACTCGATA+AGG - chr7.1:77327333-77327352 MS.gene23881:intron 25.0%
! AATGTATGATTGTCAGAATA+AGG + chr7.1:77327694-77327713 None:intergenic 25.0%
! AGTTATTCAACAATATTACC+TGG + chr7.1:77325130-77325149 None:intergenic 25.0%
! ATTAATGTGGTCAAAAAAAC+GGG - chr7.1:77326184-77326203 MS.gene23881:intron 25.0%
! ATTTACAAACATTCAATGGA+CGG + chr7.1:77326917-77326936 None:intergenic 25.0%
! CATATTTAAATTTAGCCCAA+GGG + chr7.1:77325867-77325886 None:intergenic 25.0%
! CATTAATGTGGTCAAAAAAA+CGG - chr7.1:77326183-77326202 MS.gene23881:intron 25.0%
! GAGAAAATAAGTAGATTTAG+TGG + chr7.1:77325768-77325787 None:intergenic 25.0%
! GATTATTAAAATGGGACAAA+GGG + chr7.1:77328264-77328283 None:intergenic 25.0%
! GGAATTTGAAAATAAAATGG+AGG - chr7.1:77327219-77327238 MS.gene23881:intron 25.0%
! GGATGTAATATTCTTAAAAG+TGG + chr7.1:77326557-77326576 None:intergenic 25.0%
! GTGGGAATTTGAAAATAAAA+TGG - chr7.1:77327216-77327235 MS.gene23881:intron 25.0%
! TATTCTGACAATCATACATT+CGG - chr7.1:77327694-77327713 MS.gene23881:intron 25.0%
! TCATAATTTCAGTAGCAAAT+TGG + chr7.1:77324686-77324705 None:intergenic 25.0%
!! CAAAACAATCATTTTCTTTC+AGG + chr7.1:77325191-77325210 None:intergenic 25.0%
!!! ATAAAGTTCTTTTAAGGTTG+TGG - chr7.1:77327197-77327216 MS.gene23881:intron 25.0%
!!! TAAAGTTCTTTTAAGGTTGT+GGG - chr7.1:77327198-77327217 MS.gene23881:intron 25.0%
!!! TGTTTTGTTTTGTTTTGATC+CGG - chr7.1:77325214-77325233 MS.gene23881:intron 25.0%
AAAAGTGATCAAACTTCTTC+GGG + chr7.1:77326015-77326034 None:intergenic 30.0%
AAAATACATCATCAACCCTT+GGG - chr7.1:77325849-77325868 MS.gene23881:intron 30.0%
AAATACACAAGATAGCAGAA+CGG + chr7.1:77327811-77327830 None:intergenic 30.0%
AAATTAGAGTTGTAGATAGG+TGG - chr7.1:77328342-77328361 MS.gene23881:intron 30.0%
AAGTAGTAGTAAGAGTTATG+CGG - chr7.1:77327583-77327602 MS.gene23881:intron 30.0%
AATATTAAACAAGAGGGATG+AGG - chr7.1:77325061-77325080 MS.gene23881:CDS 30.0%
ACTAGCATAACATAAGAAAG+AGG - chr7.1:77327437-77327456 MS.gene23881:intron 30.0%
AGCAGAAATAGTAGAATTTG+AGG + chr7.1:77328777-77328796 None:intergenic 30.0%
AGTACAAAAAATGTCCTAGT+AGG - chr7.1:77327654-77327673 MS.gene23881:intron 30.0%
AGTATATTTGGAAATCATGC+TGG - chr7.1:77326402-77326421 MS.gene23881:intron 30.0%
ATGCATTTGATAAAGTGACA+AGG - chr7.1:77327070-77327089 MS.gene23881:intron 30.0%
ATTCTGACAATCATACATTC+GGG - chr7.1:77327695-77327714 MS.gene23881:intron 30.0%
ATTTCACTTGCAAAATGAAG+AGG + chr7.1:77324858-77324877 None:intergenic 30.0%
CAAAAGTGATCAAACTTCTT+CGG + chr7.1:77326016-77326035 None:intergenic 30.0%
CAATTATCAACCAAGTGTTA+CGG + chr7.1:77328655-77328674 None:intergenic 30.0%
CCATATTTAAATTTAGCCCA+AGG + chr7.1:77325868-77325887 None:intergenic 30.0%
CCTTGGGCTAAATTTAAATA+TGG - chr7.1:77325865-77325884 MS.gene23881:intron 30.0%
CGATTATTAAAATGGGACAA+AGG + chr7.1:77328265-77328284 None:intergenic 30.0%
CTCTTCCTTTAATTCTAACA+AGG + chr7.1:77324824-77324843 None:intergenic 30.0%
GAAAGAAAGAAGAGAAATAG+AGG - chr7.1:77326062-77326081 MS.gene23881:intron 30.0%
GAATGATCAAAATAGATGGT+TGG - chr7.1:77325236-77325255 MS.gene23881:intron 30.0%
GCTATGATTGATACAGTAAA+GGG + chr7.1:77328869-77328888 None:intergenic 30.0%
GGTTATAAACACCATTAATG+TGG - chr7.1:77326171-77326190 MS.gene23881:intron 30.0%
GTACAAAAAATGTCCTAGTA+GGG - chr7.1:77327655-77327674 MS.gene23881:intron 30.0%
GTATATTTGGAAATCATGCT+GGG - chr7.1:77326403-77326422 MS.gene23881:intron 30.0%
GTCAAAAAAACGGGTATAAT+GGG - chr7.1:77326193-77326212 MS.gene23881:intron 30.0%
GTTATCTATTGTAGATCAGA+GGG + chr7.1:77327937-77327956 None:intergenic 30.0%
TCTATATGATCCAGAATGAA+TGG + chr7.1:77324609-77324628 None:intergenic 30.0%
TGCTATGATTGATACAGTAA+AGG + chr7.1:77328870-77328889 None:intergenic 30.0%
TGGGTAAAAAGATTCTTCTT+GGG + chr7.1:77325903-77325922 None:intergenic 30.0%
TGTAAAGGAGTTTCAACAAA+TGG + chr7.1:77324639-77324658 None:intergenic 30.0%
TGTTATCTATTGTAGATCAG+AGG + chr7.1:77327938-77327957 None:intergenic 30.0%
TTTAGAGGAGAGAGAAAATA+TGG - chr7.1:77326676-77326695 MS.gene23881:intron 30.0%
! AAGAAGAATCTTTTTACCCA+CGG - chr7.1:77325903-77325922 MS.gene23881:intron 30.0%
! AAGAGTATGTTATTCAGAGT+TGG - chr7.1:77328521-77328540 MS.gene23881:intron 30.0%
! AGGAATTAAGGAAGTATGAA+GGG - chr7.1:77326121-77326140 MS.gene23881:intron 30.0%
! ATGAGTTTTTACACTTTGTC+CGG + chr7.1:77327135-77327154 None:intergenic 30.0%
! ATTCATTTCCCTTTTGGATT+TGG + chr7.1:77327272-77327291 None:intergenic 30.0%
! ATTTTGCATATTTCAGCACT+AGG - chr7.1:77325095-77325114 MS.gene23881:CDS 30.0%
! CTGCTATCTTGTGTATTTTA+GGG - chr7.1:77327813-77327832 MS.gene23881:intron 30.0%
! CTTCATTTTGCAAGTGAAAT+TGG - chr7.1:77324858-77324877 MS.gene23881:CDS 30.0%
! TAAATTTCTCAAGTTGTGTC+CGG - chr7.1:77324899-77324918 MS.gene23881:CDS 30.0%
! TAGTGCTGAAATATGCAAAA+TGG + chr7.1:77325096-77325115 None:intergenic 30.0%
! TCTGCTATCTTGTGTATTTT+AGG - chr7.1:77327812-77327831 MS.gene23881:intron 30.0%
!! AAGTATGAAGGGGTATTTAT+AGG - chr7.1:77326132-77326151 MS.gene23881:intron 30.0%
!! TGCTATCTTGTGTATTTTAG+GGG - chr7.1:77327814-77327833 MS.gene23881:intron 30.0%
!!! ACCATCTATTTTGATCATTC+CGG + chr7.1:77325236-77325255 None:intergenic 30.0%
!!! ACTAGGACATTTTTTGTACT+CGG + chr7.1:77327654-77327673 None:intergenic 30.0%
!!! ACTGAAGAACATACGTTTTT+TGG + chr7.1:77326260-77326279 None:intergenic 30.0%
!!! CGTTTTTTTGACCACATTAA+TGG + chr7.1:77326185-77326204 None:intergenic 30.0%
AAAAAGTGACCAACCTTCTT+GGG - chr7.1:77325799-77325818 MS.gene23881:intron 35.0%
AAAGTGATCAAACTTCTTCG+GGG + chr7.1:77326014-77326033 None:intergenic 35.0%
AATACACAAGATAGCAGAAC+GGG + chr7.1:77327810-77327829 None:intergenic 35.0%
AATTAGAGCGAATATGACAG+AGG - chr7.1:77328625-77328644 MS.gene23881:CDS 35.0%
ACTCAATCCTGATTGATAGA+TGG + chr7.1:77328696-77328715 None:intergenic 35.0%
ATAGGTGGGAATGATAGTAT+AGG - chr7.1:77326150-77326169 MS.gene23881:intron 35.0%
ATATATCTTATGGTACCAGC+AGG - chr7.1:77328890-77328909 MS.gene23881:CDS 35.0%
CTCTTACAAAATATTGCCAC+CGG - chr7.1:77327113-77327132 MS.gene23881:intron 35.0%
GAAAATACATCATCAACCCT+TGG - chr7.1:77325848-77325867 MS.gene23881:intron 35.0%
GGGTAAAAAGATTCTTCTTG+GGG + chr7.1:77325902-77325921 None:intergenic 35.0%
GGTCAAAAAAACGGGTATAA+TGG - chr7.1:77326192-77326211 MS.gene23881:intron 35.0%
GTCACTTAATATGAGATGGA+TGG - chr7.1:77328164-77328183 MS.gene23881:intron 35.0%
GTGGGTAAAAAGATTCTTCT+TGG + chr7.1:77325904-77325923 None:intergenic 35.0%
TAAAAAGTGACCAACCTTCT+TGG - chr7.1:77325798-77325817 MS.gene23881:intron 35.0%
TAAGTCACACAGAGCTTATA+AGG - chr7.1:77326338-77326357 MS.gene23881:intron 35.0%
TCCGGAATGATCAAAATAGA+TGG - chr7.1:77325232-77325251 MS.gene23881:intron 35.0%
TGATATGGTGTGAGGAATTA+AGG - chr7.1:77326109-77326128 MS.gene23881:intron 35.0%
TGCAAAATGAAGAGGAGTTA+TGG + chr7.1:77324850-77324869 None:intergenic 35.0%
TTAAGCTTCCAAGCAAATGA+TGG + chr7.1:77324717-77324736 None:intergenic 35.0%
! ATGATGTATTTTCCCCAAGA+AGG + chr7.1:77325841-77325860 None:intergenic 35.0%
! CATTCATTACTTGATAGCAC+AGG - chr7.1:77328406-77328425 MS.gene23881:intron 35.0%
! GAGGAATTAAGGAAGTATGA+AGG - chr7.1:77326120-77326139 MS.gene23881:intron 35.0%
! GGAATTAAGGAAGTATGAAG+GGG - chr7.1:77326122-77326141 MS.gene23881:intron 35.0%
! GTCAAGTATTCAATGGATTC+CGG + chr7.1:77324921-77324940 None:intergenic 35.0%
! TTTTGCAAGTGAAATTGGTG+AGG - chr7.1:77324863-77324882 MS.gene23881:CDS 35.0%
!! AATTCTACTATTTCTGCTCC+AGG - chr7.1:77328779-77328798 MS.gene23881:CDS 35.0%
!! ATGAAGGGGTATTTATAGGT+GGG - chr7.1:77326136-77326155 MS.gene23881:intron 35.0%
!! CTACTTATTTTCTCCCTCTT+GGG - chr7.1:77325774-77325793 MS.gene23881:intron 35.0%
!! CTGTGTCACTTAATATGAGA+TGG - chr7.1:77328160-77328179 MS.gene23881:intron 35.0%
!! GTGATTCACGTCATTTTGAA+TGG - chr7.1:77329052-77329071 MS.gene23881:CDS 35.0%
!! TACTTATTTTCTCCCTCTTG+GGG - chr7.1:77325775-77325794 MS.gene23881:intron 35.0%
!! TATGAAGGGGTATTTATAGG+TGG - chr7.1:77326135-77326154 MS.gene23881:intron 35.0%
!! TCTACTTATTTTCTCCCTCT+TGG - chr7.1:77325773-77325792 MS.gene23881:intron 35.0%
!! TGCTTCATTTTTATTTGCCG+TGG - chr7.1:77329030-77329049 MS.gene23881:CDS 35.0%
!! TGGACATATGATGTTTCTAG+TGG - chr7.1:77328913-77328932 MS.gene23881:CDS 35.0%
!!! CTAGGACATTTTTTGTACTC+GGG + chr7.1:77327653-77327672 None:intergenic 35.0%
AAAAGTGACCAACCTTCTTG+GGG - chr7.1:77325800-77325819 MS.gene23881:intron 40.0%
AAAATAGATGGTTGGACCGT+CGG - chr7.1:77325244-77325263 MS.gene23881:intron 40.0%
AAAATAGTGAGCAGCCTTCT+TGG - chr7.1:77325824-77325843 MS.gene23881:intron 40.0%
AAATAGTGAGCAGCCTTCTT+GGG - chr7.1:77325825-77325844 MS.gene23881:intron 40.0%
AACTCACGCTGGAGTATATT+TGG - chr7.1:77326390-77326409 MS.gene23881:intron 40.0%
AATCACATATTGGATCCCGA+CGG + chr7.1:77325263-77325282 None:intergenic 40.0%
AATGCGCAATTTAAGTCACG+TGG - chr7.1:77325366-77325385 MS.gene23881:intron 40.0%
AGAGCAGAATTCCCAATATG+TGG - chr7.1:77326449-77326468 MS.gene23881:intron 40.0%
AGCTGCGGAAGTTAAAGATT+AGG + chr7.1:77327368-77327387 None:intergenic 40.0%
ATAGCTGCAGCGATATGTAA+AGG + chr7.1:77324654-77324673 None:intergenic 40.0%
ATCACGGAATTGACATGTGT+AGG + chr7.1:77328995-77329014 None:intergenic 40.0%
ATCACTTATCCAATCCTCGT+AGG - chr7.1:77327409-77327428 MS.gene23881:intron 40.0%
CAAAATGACGTGAATCACCA+CGG + chr7.1:77329050-77329069 None:intergenic 40.0%
CAGAATTCCCAATATGTGGA+GGG - chr7.1:77326453-77326472 MS.gene23881:intron 40.0%
CAGAGTCTCCAAATCCAAAA+GGG - chr7.1:77327261-77327280 MS.gene23881:intron 40.0%
CCATTGAATACTTGACTGTG+AGG - chr7.1:77324925-77324944 MS.gene23881:CDS 40.0%
CCTCACAGTCAAGTATTCAA+TGG + chr7.1:77324928-77324947 None:intergenic 40.0%
CGTTGAAACCATCATTTGCT+TGG - chr7.1:77324706-77324725 MS.gene23881:CDS 40.0%
CTAACCTGATAAATTCCACC+AGG + chr7.1:77328722-77328741 None:intergenic 40.0%
CTTGCACATAGGTTCAAGAT+TGG - chr7.1:77328581-77328600 MS.gene23881:CDS 40.0%
GAAGGGCAGAAATCACATAT+TGG + chr7.1:77325273-77325292 None:intergenic 40.0%
GAATGGTGTCTTATGCTCAA+GGG - chr7.1:77329069-77329088 MS.gene23881:CDS 40.0%
GGAATTTATCAGGTTAGTGC+TGG - chr7.1:77328725-77328744 MS.gene23881:CDS 40.0%
TACCCACGGTAAAAAGTTTC+TGG - chr7.1:77325917-77325936 MS.gene23881:intron 40.0%
TCACGGAATTGACATGTGTA+GGG + chr7.1:77328994-77329013 None:intergenic 40.0%
TCAGAGTCTCCAAATCCAAA+AGG - chr7.1:77327260-77327279 MS.gene23881:intron 40.0%
TGAATGGTGTCTTATGCTCA+AGG - chr7.1:77329068-77329087 MS.gene23881:CDS 40.0%
TGAGGATGATCCATTCATTC+TGG - chr7.1:77324596-77324615 MS.gene23881:CDS 40.0%
TTACATATCGCTGCAGCTAT+GGG - chr7.1:77324654-77324673 MS.gene23881:CDS 40.0%
TTGAACCTATGTGCAAGTGT+GGG + chr7.1:77328578-77328597 None:intergenic 40.0%
TTTACATATCGCTGCAGCTA+TGG - chr7.1:77324653-77324672 MS.gene23881:CDS 40.0%
! ACTCCAGAAACTTTTTACCG+TGG + chr7.1:77325923-77325942 None:intergenic 40.0%
! AGTTTTTACACTTTGTCCGG+TGG + chr7.1:77327132-77327151 None:intergenic 40.0%
! CTATTTTACCCCAAGAAGGT+TGG + chr7.1:77325811-77325830 None:intergenic 40.0%
! CTCACTATTTTACCCCAAGA+AGG + chr7.1:77325815-77325834 None:intergenic 40.0%
! CTCCAGAAACTTTTTACCGT+GGG + chr7.1:77325922-77325941 None:intergenic 40.0%
! GAAGTGTCATACCTAACACA+AGG - chr7.1:77327621-77327640 MS.gene23881:intron 40.0%
! GGGAACATTCATTTCCCTTT+TGG + chr7.1:77327278-77327297 None:intergenic 40.0%
! GTGCATTGATATGTGTGACA+AGG - chr7.1:77328133-77328152 MS.gene23881:intron 40.0%
! TTTTGCATAGCGAGATGGAT+GGG + chr7.1:77324756-77324775 None:intergenic 40.0%
!! TGTTCTTCAGTTTTGACCAC+CGG - chr7.1:77326269-77326288 MS.gene23881:intron 40.0%
!! TTGCGCTACTTAACTTGTGT+TGG + chr7.1:77325392-77325411 None:intergenic 40.0%
AAATAGATGGTTGGACCGTC+GGG - chr7.1:77325245-77325264 MS.gene23881:intron 45.0%
AACATCATATGTCCACCTGC+TGG + chr7.1:77328908-77328927 None:intergenic 45.0%
AATAGTGAGCAGCCTTCTTG+GGG - chr7.1:77325826-77325845 MS.gene23881:intron 45.0%
AATGAGAAGCTGTTGAGAGC+AGG - chr7.1:77326634-77326653 MS.gene23881:intron 45.0%
ACAATAGTGAGTAGCCGACT+TGG + chr7.1:77325990-77326009 None:intergenic 45.0%
ACATGTTTCGGACTGACCTA+AGG + chr7.1:77327873-77327892 None:intergenic 45.0%
ACATTCAATGGACGGCGAAT+AGG + chr7.1:77326909-77326928 None:intergenic 45.0%
ACCTGATAAATTCCACCAGG+AGG + chr7.1:77328719-77328738 None:intergenic 45.0%
ACTCGATCCCTCCACATATT+GGG + chr7.1:77326463-77326482 None:intergenic 45.0%
AGAAATAGAGGGAGAGAGTG+AGG - chr7.1:77326074-77326093 MS.gene23881:intron 45.0%
AGCACAGGCAGTTCAATTGT+TGG - chr7.1:77328421-77328440 MS.gene23881:intron 45.0%
AGCGATAAACCAGACGTTTG+TGG + chr7.1:77324782-77324801 None:intergenic 45.0%
AGTTGATCACTTCCCCAAGT+CGG - chr7.1:77325973-77325992 MS.gene23881:intron 45.0%
ATTCAATGGACGGCGAATAG+GGG + chr7.1:77326907-77326926 None:intergenic 45.0%
ATTTCTGCTCCAGGAAATGC+TGG - chr7.1:77328788-77328807 MS.gene23881:CDS 45.0%
CACGGAATTGACATGTGTAG+GGG + chr7.1:77328993-77329012 None:intergenic 45.0%
CATCCTCAATTACTGCGTAG+AGG + chr7.1:77324584-77324603 None:intergenic 45.0%
CATTCAATGGACGGCGAATA+GGG + chr7.1:77326908-77326927 None:intergenic 45.0%
CCAGCCAACAAGTACTTGAA+GGG + chr7.1:77324997-77325016 None:intergenic 45.0%
CTTGAACCTATGTGCAAGTG+TGG + chr7.1:77328579-77328598 None:intergenic 45.0%
GACTGACCTAAGGTCCAATA+TGG + chr7.1:77327863-77327882 None:intergenic 45.0%
GCAAAACAACCACAAACGTC+TGG - chr7.1:77324770-77324789 MS.gene23881:CDS 45.0%
GCAACTGCCATCTATCAATC+AGG - chr7.1:77328686-77328705 MS.gene23881:CDS 45.0%
GCAGAATTCCCAATATGTGG+AGG - chr7.1:77326452-77326471 MS.gene23881:intron 45.0%
GGAGAAAGTGATATGGTGTG+AGG - chr7.1:77326101-77326120 MS.gene23881:intron 45.0%
GGTTCAAGATTGGACGTAGA+CGG - chr7.1:77328591-77328610 MS.gene23881:CDS 45.0%
GTACGAACGTGAGTAACTCT+CGG - chr7.1:77327717-77327736 MS.gene23881:intron 45.0%
TATCTTATGGTACCAGCAGG+TGG - chr7.1:77328893-77328912 MS.gene23881:CDS 45.0%
TCCTCCTGGTGGAATTTATC+AGG - chr7.1:77328715-77328734 MS.gene23881:CDS 45.0%
TCGGGCATTATCCTTGTGTT+AGG + chr7.1:77327635-77327654 None:intergenic 45.0%
TCTCCTCTACGCAGTAATTG+AGG - chr7.1:77324578-77324597 MS.gene23881:CDS 45.0%
TGATTCGAACGGAGCCATAT+TGG - chr7.1:77327846-77327865 MS.gene23881:intron 45.0%
TTAAACAAGAGGGATGAGGC+AGG - chr7.1:77325065-77325084 MS.gene23881:CDS 45.0%
TTTCTGCTCCAGGAAATGCT+GGG - chr7.1:77328789-77328808 MS.gene23881:CDS 45.0%
TTTGCATAGCGAGATGGATG+GGG + chr7.1:77324755-77324774 None:intergenic 45.0%
! ACTGATTTCCCAGCATTTCC+TGG + chr7.1:77328800-77328819 None:intergenic 45.0%
! CAATAGTGAGTAGCCGACTT+GGG + chr7.1:77325989-77326008 None:intergenic 45.0%
! CTTGATAGTCTAGCCCTACT+AGG + chr7.1:77327671-77327690 None:intergenic 45.0%
! GGACTCTAGTCTGATTCGAA+CGG - chr7.1:77327835-77327854 MS.gene23881:intron 45.0%
! GTTTTGCATAGCGAGATGGA+TGG + chr7.1:77324757-77324776 None:intergenic 45.0%
! TTTCTAGTGGCTTCTCCAGT+GGG - chr7.1:77328926-77328945 MS.gene23881:CDS 45.0%
!! AATAGTGAGTAGCCGACTTG+GGG + chr7.1:77325988-77326007 None:intergenic 45.0%
!! ATCATGTCGACTCTTAGCTG+CGG + chr7.1:77327383-77327402 None:intergenic 45.0%
!! GGTTGTTTTGCATAGCGAGA+TGG + chr7.1:77324761-77324780 None:intergenic 45.0%
!! GTTAGTGCTGGTGATGACAA+TGG - chr7.1:77328737-77328756 MS.gene23881:CDS 45.0%
!!! GGTCACTTTTTACCCCAAGA+GGG + chr7.1:77325790-77325809 None:intergenic 45.0%
!!! TGGTCACTTTTTACCCCAAG+AGG + chr7.1:77325791-77325810 None:intergenic 45.0%
!! TAAATACAAATATAAATAAA+AGG - chr7.1:77325583-77325602 MS.gene23881:intron 5.0%
!!! TAATTTTATTAAATTAAAAG+AGG + chr7.1:77326947-77326966 None:intergenic 5.0%
AATAGAGGGAGAGAGTGAGG+AGG - chr7.1:77326077-77326096 MS.gene23881:intron 50.0%
ACGGAGCCATATTGGACCTT+AGG - chr7.1:77327854-77327873 MS.gene23881:intron 50.0%
AGGAGGGGGAGAAAGTGATA+TGG - chr7.1:77326094-77326113 MS.gene23881:intron 50.0%
ATAGAGGGAGAGAGTGAGGA+GGG - chr7.1:77326078-77326097 MS.gene23881:intron 50.0%
ATGCTCCCACACTTGCACAT+AGG - chr7.1:77328570-77328589 MS.gene23881:CDS 50.0%
CAAGAGCTTCTCACGGGTTT+GGG + chr7.1:77327786-77327805 None:intergenic 50.0%
CAATCAGGATTGAGTCCTCC+TGG - chr7.1:77328701-77328720 MS.gene23881:CDS 50.0%
CAGAGGAGAACCGTAACACT+TGG - chr7.1:77328642-77328661 MS.gene23881:CDS 50.0%
CTAAAAGCTGCAGCTCAAGC+AGG - chr7.1:77324546-77324565 MS.gene23881:CDS 50.0%
CTGAGAACACGTGTAGCGAT+AGG - chr7.1:77325017-77325036 MS.gene23881:CDS 50.0%
GAACTACCCTCGACCTTCAT+AGG - chr7.1:77327750-77327769 MS.gene23881:intron 50.0%
GACTCGATCCCTCCACATAT+TGG + chr7.1:77326464-77326483 None:intergenic 50.0%
GAGGCCCTTCAAGTACTTGT+TGG - chr7.1:77324990-77325009 MS.gene23881:CDS 50.0%
GCATGAGCGACTTCTAAGCT+AGG + chr7.1:77328554-77328573 None:intergenic 50.0%
GCCAGCCAACAAGTACTTGA+AGG + chr7.1:77324998-77325017 None:intergenic 50.0%
GGGATTACTCACGCCTATGA+AGG + chr7.1:77327766-77327785 None:intergenic 50.0%
TAGTAGCTGCCTACGAGGAT+TGG + chr7.1:77327421-77327440 None:intergenic 50.0%
TATGCGGCTATAGTGTGCGT+AGG - chr7.1:77327599-77327618 MS.gene23881:intron 50.0%
TATGCTAGTAGCTGCCTACG+AGG + chr7.1:77327426-77327445 None:intergenic 50.0%
TGACTTAACTCACGCACCAC+TGG + chr7.1:77326325-77326344 None:intergenic 50.0%
TGCGCTAGTTAACTAGCGCA+GGG + chr7.1:77325355-77325336 None:intergenic 50.0%
TTGCGCTAGTTAACTAGCGC+AGG + chr7.1:77325337-77325356 None:intergenic 50.0%
! CCCTTCAAGTACTTGTTGGC+TGG - chr7.1:77324994-77325013 MS.gene23881:CDS 50.0%
! GAGTGTTTTGTGCTGGGGAA+GGG + chr7.1:77325290-77325309 None:intergenic 50.0%
! GCTGGGAAATCAGTCTTGTC+AGG - chr7.1:77328806-77328825 MS.gene23881:CDS 50.0%
!! AGAGTGTTTTGTGCTGGGGA+AGG + chr7.1:77325291-77325310 None:intergenic 50.0%
!! GTTTCTAGTGGCTTCTCCAG+TGG - chr7.1:77328925-77328944 MS.gene23881:CDS 50.0%
!!! AACTAGCGCAGGGGCATTTT+GGG + chr7.1:77325326-77325345 None:intergenic 50.0%
!!! CGTGAGAGTGTTTTGTGCTG+GGG + chr7.1:77325295-77325314 None:intergenic 50.0%
!!! GCGTGAGAGTGTTTTGTGCT+GGG + chr7.1:77325296-77325315 None:intergenic 50.0%
!!! TAACTAGCGCAGGGGCATTT+TGG + chr7.1:77325327-77325346 None:intergenic 50.0%
!!! TGCGTGAGAGTGTTTTGTGC+TGG + chr7.1:77325297-77325316 None:intergenic 50.0%
AACGGGCCAAGAGCTTCTCA+CGG + chr7.1:77327793-77327812 None:intergenic 55.0%
ACTCACGCCTATGAAGGTCG+AGG + chr7.1:77327760-77327779 None:intergenic 55.0%
AGCACTAGGTACTAAGCGCC+AGG - chr7.1:77325109-77325128 MS.gene23881:CDS 55.0%
AGCGATAGGTGCGCAAAAGC+TGG - chr7.1:77325031-77325050 MS.gene23881:CDS 55.0%
CAGCGTGACTTAACTCACGC+TGG - chr7.1:77326379-77326398 MS.gene23881:intron 55.0%
CCAAACCCGTGAGAAGCTCT+TGG - chr7.1:77327784-77327803 MS.gene23881:intron 55.0%
CCAAGAGCTTCTCACGGGTT+TGG + chr7.1:77327787-77327806 None:intergenic 55.0%
CTCACGCCTATGAAGGTCGA+GGG + chr7.1:77327759-77327778 None:intergenic 55.0%
GAAATCATGCTGGGCGAGAG+TGG - chr7.1:77326412-77326431 MS.gene23881:intron 55.0%
GCGAGTTAACTCACGCACGT+TGG + chr7.1:77326295-77326314 None:intergenic 55.0%
GCGCTAGTTAACTAGCGCAG+GGG + chr7.1:77325335-77325354 None:intergenic 55.0%
GCTTGGAAGCTTAACCCGCA+AGG - chr7.1:77324723-77324742 MS.gene23881:CDS 55.0%
GTTAACTCACGCACGTTGGC+CGG + chr7.1:77326291-77326310 None:intergenic 55.0%
TAGAGGGAGAGAGTGAGGAG+GGG - chr7.1:77326079-77326098 MS.gene23881:intron 55.0%
TAGTGGCTTCTCCAGTGGGT+TGG - chr7.1:77328930-77328949 MS.gene23881:CDS 55.0%
TCAGGATTGAGTCCTCCTGG+TGG - chr7.1:77328704-77328723 MS.gene23881:CDS 55.0%
TGGATGGGGCTGAATCCTTG+CGG + chr7.1:77324741-77324760 None:intergenic 55.0%
TTAACTCGCGCACATGCCAG+TGG - chr7.1:77326306-77326325 MS.gene23881:intron 55.0%
ACGGGCCAAGAGCTTCTCAC+GGG + chr7.1:77327792-77327811 None:intergenic 60.0%
AGAGGGAGAGAGTGAGGAGG+GGG - chr7.1:77326080-77326099 MS.gene23881:intron 60.0%
GGATGGGGCTGAATCCTTGC+GGG + chr7.1:77324740-77324759 None:intergenic 60.0%
! CTAGCGCTGAACCAACCCAC+TGG + chr7.1:77328944-77328963 None:intergenic 60.0%
! GCGAGAGTGGTTTGTGCTGG+GGG - chr7.1:77326425-77326444 MS.gene23881:intron 60.0%
! GGCGAGAGTGGTTTGTGCTG+GGG - chr7.1:77326424-77326443 MS.gene23881:intron 60.0%
! GGGCGAGAGTGGTTTGTGCT+GGG - chr7.1:77326423-77326442 MS.gene23881:intron 60.0%
! TGGGCGAGAGTGGTTTGTGC+TGG - chr7.1:77326422-77326441 MS.gene23881:intron 60.0%
!!! GCGCAGGGGCATTTTGGGTA+TGG + chr7.1:77325321-77325340 None:intergenic 60.0%
AACTCACGCACGTTGGCCGG+TGG + chr7.1:77326288-77326307 None:intergenic 65.0%


Chromosome Type Strat End Strand Name
chr7.1 gene 77324522 77329135 77324522 ID=MS.gene23881
chr7.1 mRNA 77324522 77329135 77324522 ID=MS.gene23881.t1;Parent=MS.gene23881
chr7.1 exon 77328527 77329135 77328527 ID=MS.gene23881.t1.exon1;Parent=MS.gene23881.t1
chr7.1 CDS 77328527 77329135 77328527 ID=cds.MS.gene23881.t1;Parent=MS.gene23881.t1
chr7.1 exon 77324522 77325229 77324522 ID=MS.gene23881.t1.exon2;Parent=MS.gene23881.t1
chr7.1 CDS 77324522 77325229 77324522 ID=cds.MS.gene23881.t1;Parent=MS.gene23881.t1
Gene Sequence

>MS.gene23881

ATGAACACAAATAATGGTGAGCAGCTAAAAGCTGCAGCTCAAGCAGGCAATATAGATCTCCTCTACGCAGTAATTGAGGATGATCCATTCATTCTGGATCATATAGATTCAATACCATTTGTTGAAACTCCTTTACATATCGCTGCAGCTATGGGTCATCTCCAATTTGCTACTGAAATTATGACGTTGAAACCATCATTTGCTTGGAAGCTTAACCCGCAAGGATTCAGCCCCATCCATCTCGCTATGCAAAACAACCACAAACGTCTGGTTTATCGCTTCGTGAACATCAATAAAGACCTTGTTAGAATTAAAGGAAGAGAAGCCATAACTCCTCTTCATTTTGCAAGTGAAATTGGTGAGGTTGATCTTTTAGCTAAATTTCTCAAGTTGTGTCCGGAATCCATTGAATACTTGACTGTGAGGCACGAGACTGCACTGCATATTGCTATTAAGAATCAACAATTTGAGGCCCTTCAAGTACTTGTTGGCTGGCTGAGAACACGTGTAGCGATAGGTGCGCAAAAGCTGGAAAATCAAATATTAAACAAGAGGGATGAGGCAGGCAACACCATTTTGCATATTTCAGCACTAGGTACTAAGCGCCAGGTAATATTGTTGAATAACTAAAATCAATTGTCTACTTTATATATTTCTTATTAATAACCTGAAAGAAAATGATTGTTTTGTTTTGTTTTGTTTTGTTTTGATCCGGAATGATCAAAATAGATGGTTGGACCGTCGGGATCCAATATGTGATTTCTGCCCTTCCCCAGCACAAAACACTCTCACGCAACCATACCCAAAATGCCCCTGCGCTAGTTAACTAGCGCAAGTGTAAACTAATGCGCAATTTAAGTCACGTGGCCAACACAAGTTAAGTAGCGCAACTATATTTTTTTTTTATAATTTATTTACTATTTTCAAATTACGTTATTTACTTTATTTGTAAAATATTTTATTTACTTTATTATAAATTATTTATTTTCTAAATTATTTGTTCATTTTATTCTAAATTATTTATTTATTTGCTATATTCTAATTTAGTTATGCACTTAAAATAAATACAAATATAAATAAAAGGAAATGAACTACATTAATATTTATTCATTAAATACAAAATTAGAAAATAAAAGCAAATATAAAATAAAAAGGAATGAACAAAATTGAGGCATTTAACAAAATCTTATTTTATTAATAGAATTCATACAATACAATAATTGATACAATAATTTATTCGAATCCACTAAATCTACTTATTTTCTCCCTCTTGGGGTAAAAAGTGACCAACCTTCTTGGGGTAAAATAGTGAGCAGCCTTCTTGGGGAAAATACATCATCAACCCTTGGGCTAAATTTAAATATGGTTTTTTTTATACCCCAAGAAGAATCTTTTTACCCACGGTAAAAAGTTTCTGGAGTTAAAAAAAGCAGATTTAAACTTATCTCAAGAGTTGATCACTTCCCCAAGTCGGCTACTCACTATTGTACCCCGAAGAAGTTTGATCACTTTTGCCCCCATTAAGAATATTGAAAAAAAAGAAAGAAAGAAGAGAAATAGAGGGAGAGAGTGAGGAGGGGGAGAAAGTGATATGGTGTGAGGAATTAAGGAAGTATGAAGGGGTATTTATAGGTGGGAATGATAGTATAGGTTATAAACACCATTAATGTGGTCAAAAAAACGGGTATAATGGGTAAAAAACGTGTAGATTGAATGTTGAAAAACTGACTAAAGACCAAAAAACGTATGTTCTTCAGTTTTGACCACCGGCCAACGTGCGTGAGTTAACTCGCGCACATGCCAGTGGTGCGTGAGTTAAGTCACACAGAGCTTATAAGGTGTGTGAGTTAAGTCACGCAGCGTGACTTAACTCACGCTGGAGTATATTTGGAAATCATGCTGGGCGAGAGTGGTTTGTGCTGGGGGAAGAGCAGAATTCCCAATATGTGGAGGGATCGAGTCTTGATCTAGAGCCCGTTTGTTATAGTTTTTTTTTTAGGAAAAAAAATCACTTTTTTTTTTTAAAAAATAACCACTTTTAAGAATATTACATCCGTTTGTTATAGATTTTTAAAAAAATCAGAATCTTAAAAAAATCTAAAAACAACTTCAAATGAGAAGCTGTTGAGAGCAGGTTCTCAAAAAATAAATTTTTTTAGAGGAGAGAGAAAATATGGATATAATGATTGAACTAATTTTGTAACAAAAAAATCGCTTTTATACAGCTGTATCTAAACAAACTAAATTATTTTTTAAAAAAAGTGATTTTTATTACGGTAAACAAACGCAAAATAGATTCTGATTTTTCATAAAATCTCTAAAAAATAATCTCTAAATTATTTTATGTCAAAATCACTTTTATTTTAATCTGTAACAAACGGGCCCCTATTCGCCGTCCATTGAATGTTTGTAAATTGTAACACCTCTTTTAATTTAATAAAATTAAATAAATAAAATGAAATTTAAAAAAAAAAATCCGACATAATCTCATTTAAAAATTCATTATTTGTATATCGAATATATCGATTTGTACCTGATAACAATTTTTATGCATTTGATAAAGTGACAAGGCTGAACACATTTTCTCACTGCTCTTACAAAATATTGCCACCGGACAAAGTGTAAAAACTCATACTTTTGAAATCTATAATTTTTTAAGTAAAATAATATCAATTATAAAGTTCTTTTAAGGTTGTGGGAATTTGAAAATAAAATGGAGGTATTACACACAATATATATCAGAGTCTCCAAATCCAAAAGGGAAATGAATGTTCCCATAAATAAACAAATACGAATTAACAAAACAACTACAAAGATATATCAACTCGATAAGGCTAACACAACCTAATCTTTAACTTCCGCAGCTAAGAGTCGACATGATCTCAACATCACTTATCCAATCCTCGTAGGCAGCTACTAGCATAACATAAGAAAGAGGAGCAACAAAAGAAAAATAATATGGGGTCAGATTACACATCAAGTTATACTGATAGATATGAGAATGTACACAATAGTATTTATTTAAATACACACAAACACAAATCACACATTTGTCAAAAATAAGTAGTAGTAAGAGTTATGCGGCTATAGTGTGCGTAGGAAGTGTCATACCTAACACAAGGATAATGCCCGAGTACAAAAAATGTCCTAGTAGGGCTAGACTATCAAGCCTTATTCTGACAATCATACATTCGGGTACGAACGTGAGTAACTCTCGGTCTAGATAGTGAACTACCCTCGACCTTCATAGGCGTGAGTAATCCCAAACCCGTGAGAAGCTCTTGGCCCGTTCTGCTATCTTGTGTATTTTAGGGGACTCTAGTCTGATTCGAACGGAGCCATATTGGACCTTAGGTCAGTCCGAAACATGTTTCTTTTTGTTTTGTTCTTAATGATGAACATATTTGCTACTCCCTCTGATCTACAATAGATAACATATTTGAAAATTTGCACTGTTGACTTAACATATTTTGACTGTATTTTTCTACTAATATACAAAGATAAATAATATCATATAAGATGTCGTTGAATTCGTCTCGATGAATATTTTCAAAATATCAAATTTTTATAATTTTTTCTAAGAGATTAGTAAAGTTATTTAAGATAAAATTGTGCATTGATATGTGTGACAAGGTCAACTGTGTCACTTAATATGAGATGGATGGAGTTTTTTTTTTTTTTTTCGTGTTCGATGTCATCTTTTTCTTAGAATAACACGAATGACAACTTATAAATTACTCCCTTTGTCCCATTTTAATAATCGTTTTAAGGTTTTGCGCAGTTCTTAGAAAAATAATTAGTTTAGTTGATTTCAATGATAAAATTAGAGTTGTAGATAGGTGGTGTAGTTGCTAAAATTAATGATCTCTGACAATTGTATTGTTCATTCATTACTTGATAGCACAGGCAGTTCAATTGTTGGTAAAGACTAAAATAAAATTGAACTTAATGAACTTGGAGAACAAAACAGCATTAGACATAGCAAGCACTCCCCAGATCAAGAGTATGTTATTCAGAGTTGGAGCAAAACCTAGCTTAGAAGTCGCTCATGCTCCCACACTTGCACATAGGTTCAAGATTGGACGTAGACGGTCTAAGTTCAGAATTAGAGCGAATATGACAGAGGAGAACCGTAACACTTGGTTGATAATTGCGACTCTCGTTGCAACTGCCATCTATCAATCAGGATTGAGTCCTCCTGGTGGAATTTATCAGGTTAGTGCTGGTGATGACAATGGTGTGAACATCACTTCCTCAAATTCTACTATTTCTGCTCCAGGAAATGCTGGGAAATCAGTCTTGTCAGGATATCAATTCCTTTTGTTTTTAATTGTAAACTTGTATCCCTTTACTGTATCAATCATAGCAATATATCTTATGGTACCAGCAGGTGGACATATGATGTTTCTAGTGGCTTCTCCAGTGGGTTGGTTCAGCGCTAGTTATTTATTTAATATGTGGAGGATATCCCCTACACATGTCAATTCCGTGATTTTATTCGTAGTTTTTGCTTCATTTTTATTTGCCGTGGTGATTCACGTCATTTTGAATGGTGTCTTATGCTCAAGGGCTAAACTCAGAATCGCTAAGTTAAATGTAATAGATGATAGTTAA

Protein sequence

>MS.gene23881.t1

MNTNNGEQLKAAAQAGNIDLLYAVIEDDPFILDHIDSIPFVETPLHIAAAMGHLQFATEIMTLKPSFAWKLNPQGFSPIHLAMQNNHKRLVYRFVNINKDLVRIKGREAITPLHFASEIGEVDLLAKFLKLCPESIEYLTVRHETALHIAIKNQQFEALQVLVGWLRTRVAIGAQKLENQILNKRDEAGNTILHISALGTKRQAVQLLVKTKIKLNLMNLENKTALDIASTPQIKSMLFRVGAKPSLEVAHAPTLAHRFKIGRRRSKFRIRANMTEENRNTWLIIATLVATAIYQSGLSPPGGIYQVSAGDDNGVNITSSNSTISAPGNAGKSVLSGYQFLLFLIVNLYPFTVSIIAIYLMVPAGGHMMFLVASPVGWFSASYLFNMWRISPTHVNSVILFVVFASFLFAVVIHVILNGVLCSRAKLRIAKLNVIDDS