Alfalfa Gene Editing Database
Nr:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene23881.t1 | AES77856.1 | 76 | 387 | 91 | 1 | 1 | 385 | 1 | 387 | 1.20E-150 | 543.1 |
Swissprot:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene23881.t1 | Q8GYH5 | 36.2 | 450 | 236 | 11 | 8 | 438 | 4 | 421 | 8.0e-15 | 83.2 |
Trembl:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene23881.t1 | G7KSX2 | 76.0 | 387 | 91 | 1 | 1 | 385 | 1 | 387 | 8.5e-151 | 543.1 |
TFs/TRs:
Gene ID | Type | Classification |
---|
Protein Kinases:
Gene ID | Type | Classification |
---|
Network:
Co-expression Network:
Gene1 | Gene2 | correlation coefficient | p_value | FDR |
---|
PPI:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene23881.t1 | MTR_7g021090 | 89.664 | 387 | 38 | 1 | 1 | 385 | 1 | 387 | 0.0 | 712 |
MS.gene23881.t1 | MTR_8g072510 | 69.841 | 441 | 115 | 4 | 3 | 432 | 4 | 437 | 0.0 | 617 |
MS.gene23881.t1 | MTR_8g062410 | 70.213 | 423 | 122 | 4 | 3 | 424 | 4 | 423 | 0.0 | 582 |
MS.gene23881.t1 | MTR_8g039620 | 62.326 | 430 | 147 | 3 | 1 | 416 | 1 | 429 | 0.0 | 528 |
MS.gene23881.t1 | MTR_3g016210 | 59.633 | 436 | 152 | 7 | 3 | 417 | 4 | 436 | 5.15e-174 | 494 |
MS.gene23881.t1 | MTR_1g059930 | 63.333 | 360 | 123 | 2 | 1 | 351 | 1 | 360 | 1.54e-156 | 450 |
MS.gene23881.t1 | MTR_8g068990 | 59.733 | 375 | 126 | 5 | 1 | 364 | 1 | 361 | 1.58e-150 | 435 |
MS.gene23881.t1 | MTR_8g069880 | 55.581 | 439 | 179 | 9 | 5 | 432 | 3 | 436 | 2.26e-150 | 435 |
MS.gene23881.t1 | MTR_8g066670 | 56.979 | 437 | 178 | 5 | 1 | 431 | 1067 | 1499 | 4.85e-150 | 463 |
MS.gene23881.t1 | MTR_8g073260 | 52.594 | 424 | 176 | 8 | 1 | 409 | 1 | 414 | 1.00e-141 | 413 |
MS.gene23881.t1 | MTR_8g040930 | 58.667 | 375 | 140 | 7 | 51 | 413 | 1 | 372 | 1.99e-140 | 407 |
MS.gene23881.t1 | MTR_8g041240 | 58.667 | 375 | 140 | 7 | 51 | 413 | 1 | 372 | 1.99e-140 | 407 |
MS.gene23881.t1 | MTR_7g451420 | 63.407 | 317 | 100 | 2 | 1 | 306 | 1 | 312 | 2.44e-135 | 392 |
MS.gene23881.t1 | MTR_8g467780 | 48.506 | 435 | 208 | 3 | 8 | 426 | 10 | 444 | 1.90e-129 | 382 |
MS.gene23881.t1 | MTR_3g105650 | 42.424 | 429 | 202 | 7 | 7 | 417 | 3 | 404 | 1.80e-108 | 327 |
MS.gene23881.t1 | MTR_8g073275 | 41.084 | 443 | 160 | 12 | 51 | 409 | 1 | 426 | 4.71e-87 | 273 |
MS.gene23881.t1 | MTR_1g069110 | 24.694 | 409 | 264 | 9 | 7 | 395 | 16 | 400 | 2.86e-30 | 122 |
MS.gene23881.t1 | MTR_7g099580 | 25.000 | 304 | 183 | 8 | 8 | 306 | 11 | 274 | 6.03e-25 | 105 |
MS.gene23881.t1 | MTR_2g101320 | 27.686 | 242 | 148 | 5 | 40 | 264 | 137 | 368 | 1.64e-22 | 100 |
MS.gene23881.t1 | MTR_7g099570 | 29.756 | 205 | 127 | 4 | 9 | 208 | 9 | 201 | 1.68e-21 | 97.4 |
MS.gene23881.t1 | MTR_2g101310 | 27.801 | 241 | 148 | 5 | 40 | 264 | 137 | 367 | 2.68e-20 | 94.0 |
MS.gene23881.t1 | MTR_2g101310 | 27.801 | 241 | 148 | 5 | 40 | 264 | 137 | 367 | 4.89e-20 | 92.8 |
MS.gene23881.t1 | MTR_7g117620 | 28.959 | 221 | 141 | 3 | 44 | 260 | 119 | 327 | 5.62e-18 | 86.7 |
MS.gene23881.t1 | MTR_1g115575 | 23.077 | 416 | 242 | 13 | 44 | 412 | 169 | 553 | 1.76e-15 | 79.0 |
MS.gene23881.t1 | MTR_5g085500 | 31.646 | 158 | 94 | 4 | 78 | 230 | 8 | 156 | 3.30e-15 | 77.8 |
MS.gene23881.t1 | MTR_7g100390 | 24.812 | 399 | 231 | 13 | 1 | 355 | 30 | 403 | 4.19e-15 | 77.8 |
MS.gene23881.t1 | MTR_1g032100 | 25.481 | 208 | 135 | 3 | 45 | 244 | 95 | 290 | 8.99e-14 | 73.6 |
MS.gene23881.t1 | MTR_2g033050 | 28.729 | 181 | 117 | 5 | 55 | 231 | 212 | 384 | 1.22e-13 | 72.8 |
MS.gene23881.t1 | MTR_8g105260 | 27.778 | 216 | 134 | 5 | 44 | 250 | 101 | 303 | 1.92e-13 | 72.4 |
MS.gene23881.t1 | MTR_4g062100 | 25.000 | 216 | 146 | 3 | 45 | 256 | 109 | 312 | 2.05e-13 | 72.4 |
MS.gene23881.t1 | MTR_7g100430 | 25.882 | 170 | 111 | 3 | 42 | 209 | 124 | 280 | 2.64e-11 | 65.9 |
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene23881.t1 | AT4G10720 | 39.286 | 420 | 218 | 9 | 8 | 405 | 4 | 408 | 1.72e-85 | 268 |
MS.gene23881.t1 | AT5G15500 | 39.362 | 376 | 203 | 7 | 9 | 370 | 6 | 370 | 1.03e-80 | 256 |
MS.gene23881.t1 | AT4G10720 | 42.812 | 320 | 169 | 4 | 8 | 313 | 4 | 323 | 7.31e-80 | 253 |
MS.gene23881.t1 | AT1G14500 | 34.346 | 428 | 228 | 8 | 8 | 409 | 4 | 404 | 2.27e-79 | 253 |
MS.gene23881.t1 | AT1G14480 | 34.803 | 431 | 225 | 10 | 8 | 408 | 4 | 408 | 2.62e-77 | 247 |
MS.gene23881.t1 | AT5G54620 | 39.806 | 309 | 169 | 5 | 7 | 300 | 3 | 309 | 6.75e-65 | 214 |
MS.gene23881.t1 | AT5G54610 | 37.540 | 309 | 166 | 6 | 8 | 297 | 4 | 304 | 9.39e-59 | 198 |
MS.gene23881.t1 | AT1G14480 | 32.530 | 415 | 213 | 11 | 8 | 408 | 4 | 365 | 2.20e-58 | 197 |
MS.gene23881.t1 | AT5G15500 | 33.455 | 275 | 158 | 7 | 110 | 370 | 1 | 264 | 1.43e-36 | 137 |
MS.gene23881.t1 | AT5G51160 | 27.473 | 364 | 226 | 7 | 63 | 396 | 35 | 390 | 5.93e-32 | 126 |
MS.gene23881.t1 | AT5G54700 | 25.085 | 295 | 185 | 8 | 101 | 392 | 23 | 284 | 4.82e-18 | 85.5 |
MS.gene23881.t1 | AT4G03450 | 23.896 | 385 | 214 | 9 | 11 | 380 | 229 | 549 | 2.30e-17 | 85.1 |
MS.gene23881.t1 | AT4G03450 | 24.416 | 385 | 212 | 10 | 11 | 380 | 229 | 549 | 2.37e-17 | 85.1 |
MS.gene23881.t1 | AT5G54700 | 24.147 | 381 | 198 | 12 | 24 | 392 | 20 | 321 | 3.41e-17 | 84.0 |
MS.gene23881.t1 | AT4G03460 | 26.038 | 265 | 162 | 7 | 100 | 358 | 290 | 526 | 5.27e-17 | 84.0 |
MS.gene23881.t1 | AT4G03460 | 26.038 | 265 | 162 | 7 | 100 | 358 | 258 | 494 | 5.81e-17 | 83.6 |
MS.gene23881.t1 | AT4G03480 | 23.913 | 368 | 198 | 12 | 9 | 362 | 357 | 656 | 9.20e-16 | 80.1 |
MS.gene23881.t1 | AT4G03480 | 23.913 | 368 | 198 | 12 | 9 | 362 | 360 | 659 | 9.65e-16 | 80.1 |
MS.gene23881.t1 | AT1G34050 | 23.282 | 262 | 169 | 6 | 65 | 306 | 174 | 423 | 1.38e-15 | 79.3 |
MS.gene23881.t1 | AT2G01680 | 26.316 | 209 | 134 | 3 | 44 | 244 | 97 | 293 | 2.64e-15 | 78.6 |
MS.gene23881.t1 | AT4G03500 | 22.667 | 375 | 198 | 10 | 9 | 303 | 117 | 479 | 1.06e-14 | 76.6 |
MS.gene23881.t1 | AT4G03500 | 22.667 | 375 | 198 | 10 | 9 | 303 | 117 | 479 | 1.06e-14 | 76.6 |
MS.gene23881.t1 | AT1G10340 | 22.573 | 443 | 272 | 12 | 2 | 401 | 102 | 516 | 1.14e-14 | 76.6 |
MS.gene23881.t1 | AT4G03500 | 22.667 | 375 | 198 | 10 | 9 | 303 | 140 | 502 | 1.19e-14 | 76.6 |
MS.gene23881.t1 | AT4G03490 | 25.581 | 301 | 174 | 9 | 9 | 303 | 201 | 457 | 1.33e-14 | 76.3 |
MS.gene23881.t1 | AT4G03490 | 25.581 | 301 | 174 | 9 | 9 | 303 | 211 | 467 | 1.46e-14 | 76.3 |
MS.gene23881.t1 | AT1G10340 | 22.466 | 365 | 222 | 9 | 79 | 401 | 175 | 520 | 1.95e-14 | 75.9 |
MS.gene23881.t1 | AT4G03490 | 25.581 | 301 | 174 | 9 | 9 | 303 | 211 | 467 | 2.01e-14 | 75.9 |
MS.gene23881.t1 | AT3G12360 | 23.040 | 421 | 236 | 15 | 44 | 412 | 155 | 539 | 7.65e-14 | 73.9 |
MS.gene23881.t1 | AT3G12360 | 23.753 | 421 | 233 | 15 | 44 | 412 | 167 | 551 | 8.06e-14 | 73.9 |
MS.gene23881.t1 | AT5G54710 | 23.819 | 487 | 280 | 20 | 2 | 416 | 144 | 611 | 2.10e-13 | 72.8 |
MS.gene23881.t1 | AT5G54710 | 23.819 | 487 | 280 | 20 | 2 | 416 | 99 | 566 | 2.18e-13 | 72.4 |
MS.gene23881.t1 | AT1G03670 | 24.468 | 282 | 177 | 6 | 88 | 364 | 266 | 516 | 2.42e-13 | 72.4 |
MS.gene23881.t1 | AT4G03470 | 23.003 | 313 | 196 | 6 | 60 | 364 | 289 | 564 | 5.84e-13 | 71.2 |
MS.gene23881.t1 | AT3G09550 | 23.235 | 340 | 203 | 10 | 12 | 317 | 157 | 472 | 8.03e-13 | 70.9 |
MS.gene23881.t1 | AT3G09550 | 23.235 | 340 | 203 | 10 | 12 | 317 | 150 | 465 | 9.02e-13 | 70.9 |
MS.gene23881.t1 | AT3G09550 | 23.235 | 340 | 203 | 10 | 12 | 317 | 150 | 465 | 9.02e-13 | 70.9 |
MS.gene23881.t1 | AT5G02620 | 25.743 | 202 | 134 | 3 | 45 | 242 | 95 | 284 | 1.20e-12 | 70.1 |
MS.gene23881.t1 | AT5G02620 | 25.743 | 202 | 134 | 3 | 45 | 242 | 95 | 284 | 1.20e-12 | 70.1 |
MS.gene23881.t1 | AT5G02620 | 25.743 | 202 | 134 | 3 | 45 | 242 | 95 | 284 | 1.20e-12 | 70.1 |
MS.gene23881.t1 | AT1G05640 | 29.756 | 205 | 126 | 5 | 44 | 243 | 191 | 382 | 2.83e-12 | 69.3 |
MS.gene23881.t1 | AT2G31820 | 21.149 | 435 | 265 | 13 | 44 | 428 | 227 | 633 | 7.40e-12 | 67.8 |
MS.gene23881.t1 | AT1G07710 | 22.222 | 360 | 228 | 8 | 2 | 327 | 63 | 404 | 5.76e-11 | 65.1 |
MS.gene23881.t1 | AT1G07710 | 22.222 | 360 | 228 | 8 | 2 | 327 | 63 | 404 | 5.76e-11 | 65.1 |
MS.gene23881.t1 | AT4G14390 | 23.443 | 273 | 186 | 6 | 41 | 303 | 264 | 523 | 7.49e-11 | 64.7 |
MS.gene23881.t1 | AT4G14390 | 23.443 | 273 | 186 | 6 | 41 | 303 | 283 | 542 | 8.01e-11 | 64.7 |
Find 89 sgRNAs with CRISPR-Local
Find 294 sgRNAs with CRISPR-GE
CRISPR-Local
sgRNA_sequence | on_target_score | Position | Region |
---|---|---|---|
AAAGACCTTGTTAGAATTAA+AGG | 0.120242 | 7.1:-77328819 | MS.gene23881:CDS |
TCATAATTTCAGTAGCAAAT+TGG | 0.281833 | 7.1:+77328952 | None:intergenic |
TGAGGATGATCCATTCATTC+TGG | 0.307992 | 7.1:-77329039 | MS.gene23881:CDS |
TCCTCCTGGTGGAATTTATC+AGG | 0.309153 | 7.1:-77324920 | MS.gene23881:CDS |
ACTGATTTCCCAGCATTTCC+TGG | 0.327849 | 7.1:+77324838 | None:intergenic |
AATCATAGCAATATATCTTA+TGG | 0.353839 | 7.1:-77324755 | MS.gene23881:CDS |
TCAAACATGAACACAAATAA+TGG | 0.376129 | 7.1:-77329119 | None:intergenic |
TGAATAACATACTCTTGATC+TGG | 0.381575 | 7.1:+77325121 | None:intergenic |
GAGGCCCTTCAAGTACTTGT+TGG | 0.390678 | 7.1:-77328645 | MS.gene23881:CDS |
TAGTGCTGAAATATGCAAAA+TGG | 0.398549 | 7.1:+77328542 | None:intergenic |
CCCTTCAAGTACTTGTTGGC+TGG | 0.409768 | 7.1:-77328641 | MS.gene23881:CDS |
GTCAAGTATTCAATGGATTC+CGG | 0.412377 | 7.1:+77328717 | None:intergenic |
TGCAAAATGAAGAGGAGTTA+TGG | 0.420767 | 7.1:+77328788 | None:intergenic |
GCTATGATTGATACAGTAAA+GGG | 0.421350 | 7.1:+77324769 | None:intergenic |
TTTACATATCGCTGCAGCTA+TGG | 0.430252 | 7.1:-77328982 | MS.gene23881:CDS |
TTTCTAGTGGCTTCTCCAGT+GGG | 0.433022 | 7.1:-77324709 | MS.gene23881:CDS |
AGCGATAAACCAGACGTTTG+TGG | 0.433961 | 7.1:+77328856 | None:intergenic |
GGATGGGGCTGAATCCTTGC+GGG | 0.440119 | 7.1:+77328898 | None:intergenic |
CTAGTTATTTATTTAATATG+TGG | 0.446543 | 7.1:-77324675 | MS.gene23881:CDS |
AAAATTGAACTTAATGAACT+TGG | 0.446815 | 7.1:-77325178 | MS.gene23881:CDS |
TGTAAAGGAGTTTCAACAAA+TGG | 0.448723 | 7.1:+77328999 | None:intergenic |
ATTTCTGCTCCAGGAAATGC+TGG | 0.448740 | 7.1:-77324847 | MS.gene23881:CDS |
AGCAGAAATAGTAGAATTTG+AGG | 0.449797 | 7.1:+77324861 | None:intergenic |
CGTTGAAACCATCATTTGCT+TGG | 0.451045 | 7.1:-77328929 | MS.gene23881:CDS |
CTAAAAGCTGCAGCTCAAGC+AGG | 0.453056 | 7.1:-77329089 | MS.gene23881:CDS |
CTTGCACATAGGTTCAAGAT+TGG | 0.454814 | 7.1:-77325054 | MS.gene23881:CDS |
TCTATATGATCCAGAATGAA+TGG | 0.457800 | 7.1:+77329029 | None:intergenic |
ACTCAATCCTGATTGATAGA+TGG | 0.467142 | 7.1:+77324942 | None:intergenic |
GCAACTGCCATCTATCAATC+AGG | 0.473264 | 7.1:-77324949 | MS.gene23881:CDS |
GCCAGCCAACAAGTACTTGA+AGG | 0.473494 | 7.1:+77328640 | None:intergenic |
AGCGATAGGTGCGCAAAAGC+TGG | 0.477050 | 7.1:-77328604 | MS.gene23881:CDS |
GCTGGGAAATCAGTCTTGTC+AGG | 0.477588 | 7.1:-77324829 | MS.gene23881:CDS |
TAAATTTCTCAAGTTGTGTC+CGG | 0.481016 | 7.1:-77328736 | MS.gene23881:CDS |
CTCTTCCTTTAATTCTAACA+AGG | 0.482377 | 7.1:+77328814 | None:intergenic |
AGCACAGGCAGTTCAATTGT+TGG | 0.483372 | 7.1:-77325214 | MS.gene23881:intron |
AATTCTACTATTTCTGCTCC+AGG | 0.488070 | 7.1:-77324856 | MS.gene23881:CDS |
TGCTATGATTGATACAGTAA+AGG | 0.488511 | 7.1:+77324768 | None:intergenic |
TATTAAGAATCAACAATTTG+AGG | 0.490260 | 7.1:-77328664 | MS.gene23881:CDS |
TAGTGGCTTCTCCAGTGGGT+TGG | 0.490670 | 7.1:-77324705 | MS.gene23881:CDS |
AAGAGTATGTTATTCAGAGT+TGG | 0.492729 | 7.1:-77325114 | MS.gene23881:CDS |
CAATCAGGATTGAGTCCTCC+TGG | 0.505135 | 7.1:-77324934 | MS.gene23881:CDS |
TCACGGAATTGACATGTGTA+GGG | 0.505298 | 7.1:+77324644 | None:intergenic |
CCTCACAGTCAAGTATTCAA+TGG | 0.507786 | 7.1:+77328710 | None:intergenic |
GAATAACATACTCTTGATCT+GGG | 0.509303 | 7.1:+77325122 | None:intergenic |
CAATTATCAACCAAGTGTTA+CGG | 0.509514 | 7.1:+77324983 | None:intergenic |
GTTTCTAGTGGCTTCTCCAG+TGG | 0.510517 | 7.1:-77324710 | MS.gene23881:CDS |
TTAAGCTTCCAAGCAAATGA+TGG | 0.511068 | 7.1:+77328921 | None:intergenic |
TTACATATCGCTGCAGCTAT+GGG | 0.515755 | 7.1:-77328981 | MS.gene23881:CDS |
TGAATGGTGTCTTATGCTCA+AGG | 0.516218 | 7.1:-77324567 | MS.gene23881:CDS |
GCAAAACAACCACAAACGTC+TGG | 0.518477 | 7.1:-77328865 | MS.gene23881:CDS |
AGCACTAGGTACTAAGCGCC+AGG | 0.534377 | 7.1:-77328526 | MS.gene23881:intron |
ATTTCACTTGCAAAATGAAG+AGG | 0.544959 | 7.1:+77328780 | None:intergenic |
TCTCCTCTACGCAGTAATTG+AGG | 0.549163 | 7.1:-77329057 | MS.gene23881:CDS |
GTTATTTATTTAATATGTGG+AGG | 0.550980 | 7.1:-77324672 | MS.gene23881:CDS |
GGAATTTATCAGGTTAGTGC+TGG | 0.554753 | 7.1:-77324910 | MS.gene23881:CDS |
ATATATCTTATGGTACCAGC+AGG | 0.566763 | 7.1:-77324745 | MS.gene23881:CDS |
AATATTAAACAAGAGGGATG+AGG | 0.567985 | 7.1:-77328574 | MS.gene23881:CDS |
AACATCATATGTCCACCTGC+TGG | 0.570024 | 7.1:+77324730 | None:intergenic |
TTAAACAAGAGGGATGAGGC+AGG | 0.573840 | 7.1:-77328570 | MS.gene23881:CDS |
CAGAGGAGAACCGTAACACT+TGG | 0.576139 | 7.1:-77324993 | MS.gene23881:CDS |
GCATGAGCGACTTCTAAGCT+AGG | 0.583244 | 7.1:+77325084 | None:intergenic |
CTAGCGCTGAACCAACCCAC+TGG | 0.583784 | 7.1:+77324694 | None:intergenic |
CTGAGAACACGTGTAGCGAT+AGG | 0.584080 | 7.1:-77328618 | MS.gene23881:CDS |
AAAATCAAATATTAAACAAG+AGG | 0.584655 | 7.1:-77328581 | MS.gene23881:CDS |
ATCACGGAATTGACATGTGT+AGG | 0.585052 | 7.1:+77324643 | None:intergenic |
ATAGCTGCAGCGATATGTAA+AGG | 0.585747 | 7.1:+77328984 | None:intergenic |
TGGATGGGGCTGAATCCTTG+CGG | 0.591962 | 7.1:+77328897 | None:intergenic |
TGGACATATGATGTTTCTAG+TGG | 0.594185 | 7.1:-77324722 | MS.gene23881:CDS |
TTTGCATAGCGAGATGGATG+GGG | 0.598780 | 7.1:+77328883 | None:intergenic |
ATGCTCCCACACTTGCACAT+AGG | 0.610300 | 7.1:-77325065 | MS.gene23881:CDS |
GGTTCAAGATTGGACGTAGA+CGG | 0.612801 | 7.1:-77325044 | MS.gene23881:CDS |
GCTTGGAAGCTTAACCCGCA+AGG | 0.615015 | 7.1:-77328912 | MS.gene23881:CDS |
CTTGAACCTATGTGCAAGTG+TGG | 0.615826 | 7.1:+77325059 | None:intergenic |
AAATCAAATATTAAACAAGA+GGG | 0.615878 | 7.1:-77328580 | MS.gene23881:CDS |
GAATGGTGTCTTATGCTCAA+GGG | 0.617185 | 7.1:-77324566 | MS.gene23881:CDS |
TATCTTATGGTACCAGCAGG+TGG | 0.618253 | 7.1:-77324742 | MS.gene23881:CDS |
CCAGCCAACAAGTACTTGAA+GGG | 0.622327 | 7.1:+77328641 | None:intergenic |
CACGGAATTGACATGTGTAG+GGG | 0.641300 | 7.1:+77324645 | None:intergenic |
CTAACCTGATAAATTCCACC+AGG | 0.648952 | 7.1:+77324916 | None:intergenic |
CATCCTCAATTACTGCGTAG+AGG | 0.659584 | 7.1:+77329054 | None:intergenic |
TTTCTGCTCCAGGAAATGCT+GGG | 0.667897 | 7.1:-77324846 | MS.gene23881:CDS |
CCATTGAATACTTGACTGTG+AGG | 0.675589 | 7.1:-77328710 | MS.gene23881:CDS |
GTTAGTGCTGGTGATGACAA+TGG | 0.676683 | 7.1:-77324898 | MS.gene23881:CDS |
TCAGGATTGAGTCCTCCTGG+TGG | 0.678999 | 7.1:-77324931 | MS.gene23881:CDS |
CAAAATGACGTGAATCACCA+CGG | 0.686476 | 7.1:+77324588 | None:intergenic |
AATTAGAGCGAATATGACAG+AGG | 0.695810 | 7.1:-77325010 | MS.gene23881:CDS |
ACCTGATAAATTCCACCAGG+AGG | 0.699430 | 7.1:+77324919 | None:intergenic |
AATAACATACTCTTGATCTG+GGG | 0.699856 | 7.1:+77325123 | None:intergenic |
TTGAACCTATGTGCAAGTGT+GGG | 0.705991 | 7.1:+77325060 | None:intergenic |
CRISPR-GE
badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
---|---|---|---|---|---|
!! | AAAAAAAAAACTATAACAAA+CGG | + | chr7.1:77326499-77326518 | None:intergenic | 10.0% |
!! | AAAGCAAATATAAAATAAAA+AGG | - | chr7.1:77325654-77325673 | MS.gene23881:intron | 10.0% |
!!! | AAAAAAAGTGATTTTTATTA+CGG | - | chr7.1:77326776-77326795 | MS.gene23881:intron | 10.0% |
!!! | CAAAAAATAAATTTTTTTAG+AGG | - | chr7.1:77326661-77326680 | MS.gene23881:intron | 10.0% |
!!! | TTTGTTATAGTTTTTTTTTT+AGG | - | chr7.1:77326499-77326518 | MS.gene23881:intron | 10.0% |
!!! | TTTTAAAAATCTATAACAAA+CGG | + | chr7.1:77326578-77326597 | None:intergenic | 10.0% |
!!! | TTTTTTTCAATATTCTTAAT+GGG | + | chr7.1:77326041-77326060 | None:intergenic | 10.0% |
!!! | TTTTTTTTCAATATTCTTAA+TGG | + | chr7.1:77326042-77326061 | None:intergenic | 10.0% |
!! | AAAAAAAAACTATAACAAAC+GGG | + | chr7.1:77326498-77326517 | None:intergenic | 15.0% |
!! | AAAATCAAATATTAAACAAG+AGG | - | chr7.1:77325054-77325073 | MS.gene23881:CDS | 15.0% |
!! | AAATCAAATATTAAACAAGA+GGG | - | chr7.1:77325055-77325074 | MS.gene23881:CDS | 15.0% |
!! | AACAAAAGAAAAATAATATG+GGG | - | chr7.1:77327463-77327482 | MS.gene23881:intron | 15.0% |
!! | AATTCGTATTTGTTTATTTA+TGG | + | chr7.1:77327299-77327318 | None:intergenic | 15.0% |
!! | AGTTTACAATTAAAAACAAA+AGG | + | chr7.1:77328841-77328860 | None:intergenic | 15.0% |
!! | ATTCGTATTTGTTTATTTAT+GGG | + | chr7.1:77327298-77327317 | None:intergenic | 15.0% |
!! | CAACAAAAGAAAAATAATAT+GGG | - | chr7.1:77327462-77327481 | MS.gene23881:intron | 15.0% |
!! | CTAGTTATTTATTTAATATG+TGG | - | chr7.1:77328960-77328979 | MS.gene23881:CDS | 15.0% |
!! | CTTAAAACGATTATTAAAAT+GGG | + | chr7.1:77328272-77328291 | None:intergenic | 15.0% |
!!! | ATTTTTAAATGAGATTATGT+CGG | + | chr7.1:77327001-77327020 | None:intergenic | 15.0% |
!!! | TCAATTATAAAGTTCTTTTA+AGG | - | chr7.1:77327191-77327210 | MS.gene23881:intron | 15.0% |
!!! | TTATTTTAATCTGTAACAAA+CGG | - | chr7.1:77326880-77326899 | MS.gene23881:intron | 15.0% |
!!! | TTTTTTCAATATTCTTAATG+GGG | + | chr7.1:77326040-77326059 | None:intergenic | 15.0% |
!! | AAAAACTACGAATAAAATCA+CGG | + | chr7.1:77329011-77329030 | None:intergenic | 20.0% |
!! | AAAATTGAACTTAATGAACT+TGG | - | chr7.1:77328457-77328476 | MS.gene23881:intron | 20.0% |
!! | AAACAAAAAGAAACATGTTT+CGG | + | chr7.1:77327885-77327904 | None:intergenic | 20.0% |
!! | AATCATAGCAATATATCTTA+TGG | - | chr7.1:77328880-77328899 | MS.gene23881:CDS | 20.0% |
!! | AATGCATAAAAATTGTTATC+AGG | + | chr7.1:77327057-77327076 | None:intergenic | 20.0% |
!! | ATAAAATTAGAGTTGTAGAT+AGG | - | chr7.1:77328339-77328358 | MS.gene23881:intron | 20.0% |
!! | CCTTAAAACGATTATTAAAA+TGG | + | chr7.1:77328273-77328292 | None:intergenic | 20.0% |
!! | GCAACAAAAGAAAAATAATA+TGG | - | chr7.1:77327461-77327480 | MS.gene23881:intron | 20.0% |
!! | GTTATTTATTTAATATGTGG+AGG | - | chr7.1:77328963-77328982 | MS.gene23881:CDS | 20.0% |
!! | TACAATTTACAAACATTCAA+TGG | + | chr7.1:77326921-77326940 | None:intergenic | 20.0% |
!! | TATTAAGAATCAACAATTTG+AGG | - | chr7.1:77324971-77324990 | MS.gene23881:CDS | 20.0% |
!!! | CCATTTTAATAATCGTTTTA+AGG | - | chr7.1:77328270-77328289 | MS.gene23881:intron | 20.0% |
!!! | TATTTTAATCTGTAACAAAC+GGG | - | chr7.1:77326881-77326900 | MS.gene23881:intron | 20.0% |
!!! | TTTTTCAATATTCTTAATGG+GGG | + | chr7.1:77326039-77326058 | None:intergenic | 20.0% |
! | AAAAGGAATGAACAAAATTG+AGG | - | chr7.1:77325671-77325690 | MS.gene23881:intron | 25.0% |
! | AAAGAAAGAAGAGAAATAGA+GGG | - | chr7.1:77326063-77326082 | MS.gene23881:intron | 25.0% |
! | AAAGACCTTGTTAGAATTAA+AGG | - | chr7.1:77324816-77324835 | MS.gene23881:CDS | 25.0% |
! | AAAGATATATCAACTCGATA+AGG | - | chr7.1:77327333-77327352 | MS.gene23881:intron | 25.0% |
! | AATGTATGATTGTCAGAATA+AGG | + | chr7.1:77327694-77327713 | None:intergenic | 25.0% |
! | AGTTATTCAACAATATTACC+TGG | + | chr7.1:77325130-77325149 | None:intergenic | 25.0% |
! | ATTAATGTGGTCAAAAAAAC+GGG | - | chr7.1:77326184-77326203 | MS.gene23881:intron | 25.0% |
! | ATTTACAAACATTCAATGGA+CGG | + | chr7.1:77326917-77326936 | None:intergenic | 25.0% |
! | CATATTTAAATTTAGCCCAA+GGG | + | chr7.1:77325867-77325886 | None:intergenic | 25.0% |
! | CATTAATGTGGTCAAAAAAA+CGG | - | chr7.1:77326183-77326202 | MS.gene23881:intron | 25.0% |
! | GAGAAAATAAGTAGATTTAG+TGG | + | chr7.1:77325768-77325787 | None:intergenic | 25.0% |
! | GATTATTAAAATGGGACAAA+GGG | + | chr7.1:77328264-77328283 | None:intergenic | 25.0% |
! | GGAATTTGAAAATAAAATGG+AGG | - | chr7.1:77327219-77327238 | MS.gene23881:intron | 25.0% |
! | GGATGTAATATTCTTAAAAG+TGG | + | chr7.1:77326557-77326576 | None:intergenic | 25.0% |
! | GTGGGAATTTGAAAATAAAA+TGG | - | chr7.1:77327216-77327235 | MS.gene23881:intron | 25.0% |
! | TATTCTGACAATCATACATT+CGG | - | chr7.1:77327694-77327713 | MS.gene23881:intron | 25.0% |
! | TCATAATTTCAGTAGCAAAT+TGG | + | chr7.1:77324686-77324705 | None:intergenic | 25.0% |
!! | CAAAACAATCATTTTCTTTC+AGG | + | chr7.1:77325191-77325210 | None:intergenic | 25.0% |
!!! | ATAAAGTTCTTTTAAGGTTG+TGG | - | chr7.1:77327197-77327216 | MS.gene23881:intron | 25.0% |
!!! | TAAAGTTCTTTTAAGGTTGT+GGG | - | chr7.1:77327198-77327217 | MS.gene23881:intron | 25.0% |
!!! | TGTTTTGTTTTGTTTTGATC+CGG | - | chr7.1:77325214-77325233 | MS.gene23881:intron | 25.0% |
AAAAGTGATCAAACTTCTTC+GGG | + | chr7.1:77326015-77326034 | None:intergenic | 30.0% | |
AAAATACATCATCAACCCTT+GGG | - | chr7.1:77325849-77325868 | MS.gene23881:intron | 30.0% | |
AAATACACAAGATAGCAGAA+CGG | + | chr7.1:77327811-77327830 | None:intergenic | 30.0% | |
AAATTAGAGTTGTAGATAGG+TGG | - | chr7.1:77328342-77328361 | MS.gene23881:intron | 30.0% | |
AAGTAGTAGTAAGAGTTATG+CGG | - | chr7.1:77327583-77327602 | MS.gene23881:intron | 30.0% | |
AATATTAAACAAGAGGGATG+AGG | - | chr7.1:77325061-77325080 | MS.gene23881:CDS | 30.0% | |
ACTAGCATAACATAAGAAAG+AGG | - | chr7.1:77327437-77327456 | MS.gene23881:intron | 30.0% | |
AGCAGAAATAGTAGAATTTG+AGG | + | chr7.1:77328777-77328796 | None:intergenic | 30.0% | |
AGTACAAAAAATGTCCTAGT+AGG | - | chr7.1:77327654-77327673 | MS.gene23881:intron | 30.0% | |
AGTATATTTGGAAATCATGC+TGG | - | chr7.1:77326402-77326421 | MS.gene23881:intron | 30.0% | |
ATGCATTTGATAAAGTGACA+AGG | - | chr7.1:77327070-77327089 | MS.gene23881:intron | 30.0% | |
ATTCTGACAATCATACATTC+GGG | - | chr7.1:77327695-77327714 | MS.gene23881:intron | 30.0% | |
ATTTCACTTGCAAAATGAAG+AGG | + | chr7.1:77324858-77324877 | None:intergenic | 30.0% | |
CAAAAGTGATCAAACTTCTT+CGG | + | chr7.1:77326016-77326035 | None:intergenic | 30.0% | |
CAATTATCAACCAAGTGTTA+CGG | + | chr7.1:77328655-77328674 | None:intergenic | 30.0% | |
CCATATTTAAATTTAGCCCA+AGG | + | chr7.1:77325868-77325887 | None:intergenic | 30.0% | |
CCTTGGGCTAAATTTAAATA+TGG | - | chr7.1:77325865-77325884 | MS.gene23881:intron | 30.0% | |
CGATTATTAAAATGGGACAA+AGG | + | chr7.1:77328265-77328284 | None:intergenic | 30.0% | |
CTCTTCCTTTAATTCTAACA+AGG | + | chr7.1:77324824-77324843 | None:intergenic | 30.0% | |
GAAAGAAAGAAGAGAAATAG+AGG | - | chr7.1:77326062-77326081 | MS.gene23881:intron | 30.0% | |
GAATGATCAAAATAGATGGT+TGG | - | chr7.1:77325236-77325255 | MS.gene23881:intron | 30.0% | |
GCTATGATTGATACAGTAAA+GGG | + | chr7.1:77328869-77328888 | None:intergenic | 30.0% | |
GGTTATAAACACCATTAATG+TGG | - | chr7.1:77326171-77326190 | MS.gene23881:intron | 30.0% | |
GTACAAAAAATGTCCTAGTA+GGG | - | chr7.1:77327655-77327674 | MS.gene23881:intron | 30.0% | |
GTATATTTGGAAATCATGCT+GGG | - | chr7.1:77326403-77326422 | MS.gene23881:intron | 30.0% | |
GTCAAAAAAACGGGTATAAT+GGG | - | chr7.1:77326193-77326212 | MS.gene23881:intron | 30.0% | |
GTTATCTATTGTAGATCAGA+GGG | + | chr7.1:77327937-77327956 | None:intergenic | 30.0% | |
TCTATATGATCCAGAATGAA+TGG | + | chr7.1:77324609-77324628 | None:intergenic | 30.0% | |
TGCTATGATTGATACAGTAA+AGG | + | chr7.1:77328870-77328889 | None:intergenic | 30.0% | |
TGGGTAAAAAGATTCTTCTT+GGG | + | chr7.1:77325903-77325922 | None:intergenic | 30.0% | |
TGTAAAGGAGTTTCAACAAA+TGG | + | chr7.1:77324639-77324658 | None:intergenic | 30.0% | |
TGTTATCTATTGTAGATCAG+AGG | + | chr7.1:77327938-77327957 | None:intergenic | 30.0% | |
TTTAGAGGAGAGAGAAAATA+TGG | - | chr7.1:77326676-77326695 | MS.gene23881:intron | 30.0% | |
! | AAGAAGAATCTTTTTACCCA+CGG | - | chr7.1:77325903-77325922 | MS.gene23881:intron | 30.0% |
! | AAGAGTATGTTATTCAGAGT+TGG | - | chr7.1:77328521-77328540 | MS.gene23881:intron | 30.0% |
! | AGGAATTAAGGAAGTATGAA+GGG | - | chr7.1:77326121-77326140 | MS.gene23881:intron | 30.0% |
! | ATGAGTTTTTACACTTTGTC+CGG | + | chr7.1:77327135-77327154 | None:intergenic | 30.0% |
! | ATTCATTTCCCTTTTGGATT+TGG | + | chr7.1:77327272-77327291 | None:intergenic | 30.0% |
! | ATTTTGCATATTTCAGCACT+AGG | - | chr7.1:77325095-77325114 | MS.gene23881:CDS | 30.0% |
! | CTGCTATCTTGTGTATTTTA+GGG | - | chr7.1:77327813-77327832 | MS.gene23881:intron | 30.0% |
! | CTTCATTTTGCAAGTGAAAT+TGG | - | chr7.1:77324858-77324877 | MS.gene23881:CDS | 30.0% |
! | TAAATTTCTCAAGTTGTGTC+CGG | - | chr7.1:77324899-77324918 | MS.gene23881:CDS | 30.0% |
! | TAGTGCTGAAATATGCAAAA+TGG | + | chr7.1:77325096-77325115 | None:intergenic | 30.0% |
! | TCTGCTATCTTGTGTATTTT+AGG | - | chr7.1:77327812-77327831 | MS.gene23881:intron | 30.0% |
!! | AAGTATGAAGGGGTATTTAT+AGG | - | chr7.1:77326132-77326151 | MS.gene23881:intron | 30.0% |
!! | TGCTATCTTGTGTATTTTAG+GGG | - | chr7.1:77327814-77327833 | MS.gene23881:intron | 30.0% |
!!! | ACCATCTATTTTGATCATTC+CGG | + | chr7.1:77325236-77325255 | None:intergenic | 30.0% |
!!! | ACTAGGACATTTTTTGTACT+CGG | + | chr7.1:77327654-77327673 | None:intergenic | 30.0% |
!!! | ACTGAAGAACATACGTTTTT+TGG | + | chr7.1:77326260-77326279 | None:intergenic | 30.0% |
!!! | CGTTTTTTTGACCACATTAA+TGG | + | chr7.1:77326185-77326204 | None:intergenic | 30.0% |
AAAAAGTGACCAACCTTCTT+GGG | - | chr7.1:77325799-77325818 | MS.gene23881:intron | 35.0% | |
AAAGTGATCAAACTTCTTCG+GGG | + | chr7.1:77326014-77326033 | None:intergenic | 35.0% | |
AATACACAAGATAGCAGAAC+GGG | + | chr7.1:77327810-77327829 | None:intergenic | 35.0% | |
AATTAGAGCGAATATGACAG+AGG | - | chr7.1:77328625-77328644 | MS.gene23881:CDS | 35.0% | |
ACTCAATCCTGATTGATAGA+TGG | + | chr7.1:77328696-77328715 | None:intergenic | 35.0% | |
ATAGGTGGGAATGATAGTAT+AGG | - | chr7.1:77326150-77326169 | MS.gene23881:intron | 35.0% | |
ATATATCTTATGGTACCAGC+AGG | - | chr7.1:77328890-77328909 | MS.gene23881:CDS | 35.0% | |
CTCTTACAAAATATTGCCAC+CGG | - | chr7.1:77327113-77327132 | MS.gene23881:intron | 35.0% | |
GAAAATACATCATCAACCCT+TGG | - | chr7.1:77325848-77325867 | MS.gene23881:intron | 35.0% | |
GGGTAAAAAGATTCTTCTTG+GGG | + | chr7.1:77325902-77325921 | None:intergenic | 35.0% | |
GGTCAAAAAAACGGGTATAA+TGG | - | chr7.1:77326192-77326211 | MS.gene23881:intron | 35.0% | |
GTCACTTAATATGAGATGGA+TGG | - | chr7.1:77328164-77328183 | MS.gene23881:intron | 35.0% | |
GTGGGTAAAAAGATTCTTCT+TGG | + | chr7.1:77325904-77325923 | None:intergenic | 35.0% | |
TAAAAAGTGACCAACCTTCT+TGG | - | chr7.1:77325798-77325817 | MS.gene23881:intron | 35.0% | |
TAAGTCACACAGAGCTTATA+AGG | - | chr7.1:77326338-77326357 | MS.gene23881:intron | 35.0% | |
TCCGGAATGATCAAAATAGA+TGG | - | chr7.1:77325232-77325251 | MS.gene23881:intron | 35.0% | |
TGATATGGTGTGAGGAATTA+AGG | - | chr7.1:77326109-77326128 | MS.gene23881:intron | 35.0% | |
TGCAAAATGAAGAGGAGTTA+TGG | + | chr7.1:77324850-77324869 | None:intergenic | 35.0% | |
TTAAGCTTCCAAGCAAATGA+TGG | + | chr7.1:77324717-77324736 | None:intergenic | 35.0% | |
! | ATGATGTATTTTCCCCAAGA+AGG | + | chr7.1:77325841-77325860 | None:intergenic | 35.0% |
! | CATTCATTACTTGATAGCAC+AGG | - | chr7.1:77328406-77328425 | MS.gene23881:intron | 35.0% |
! | GAGGAATTAAGGAAGTATGA+AGG | - | chr7.1:77326120-77326139 | MS.gene23881:intron | 35.0% |
! | GGAATTAAGGAAGTATGAAG+GGG | - | chr7.1:77326122-77326141 | MS.gene23881:intron | 35.0% |
! | GTCAAGTATTCAATGGATTC+CGG | + | chr7.1:77324921-77324940 | None:intergenic | 35.0% |
! | TTTTGCAAGTGAAATTGGTG+AGG | - | chr7.1:77324863-77324882 | MS.gene23881:CDS | 35.0% |
!! | AATTCTACTATTTCTGCTCC+AGG | - | chr7.1:77328779-77328798 | MS.gene23881:CDS | 35.0% |
!! | ATGAAGGGGTATTTATAGGT+GGG | - | chr7.1:77326136-77326155 | MS.gene23881:intron | 35.0% |
!! | CTACTTATTTTCTCCCTCTT+GGG | - | chr7.1:77325774-77325793 | MS.gene23881:intron | 35.0% |
!! | CTGTGTCACTTAATATGAGA+TGG | - | chr7.1:77328160-77328179 | MS.gene23881:intron | 35.0% |
!! | GTGATTCACGTCATTTTGAA+TGG | - | chr7.1:77329052-77329071 | MS.gene23881:CDS | 35.0% |
!! | TACTTATTTTCTCCCTCTTG+GGG | - | chr7.1:77325775-77325794 | MS.gene23881:intron | 35.0% |
!! | TATGAAGGGGTATTTATAGG+TGG | - | chr7.1:77326135-77326154 | MS.gene23881:intron | 35.0% |
!! | TCTACTTATTTTCTCCCTCT+TGG | - | chr7.1:77325773-77325792 | MS.gene23881:intron | 35.0% |
!! | TGCTTCATTTTTATTTGCCG+TGG | - | chr7.1:77329030-77329049 | MS.gene23881:CDS | 35.0% |
!! | TGGACATATGATGTTTCTAG+TGG | - | chr7.1:77328913-77328932 | MS.gene23881:CDS | 35.0% |
!!! | CTAGGACATTTTTTGTACTC+GGG | + | chr7.1:77327653-77327672 | None:intergenic | 35.0% |
AAAAGTGACCAACCTTCTTG+GGG | - | chr7.1:77325800-77325819 | MS.gene23881:intron | 40.0% | |
AAAATAGATGGTTGGACCGT+CGG | - | chr7.1:77325244-77325263 | MS.gene23881:intron | 40.0% | |
AAAATAGTGAGCAGCCTTCT+TGG | - | chr7.1:77325824-77325843 | MS.gene23881:intron | 40.0% | |
AAATAGTGAGCAGCCTTCTT+GGG | - | chr7.1:77325825-77325844 | MS.gene23881:intron | 40.0% | |
AACTCACGCTGGAGTATATT+TGG | - | chr7.1:77326390-77326409 | MS.gene23881:intron | 40.0% | |
AATCACATATTGGATCCCGA+CGG | + | chr7.1:77325263-77325282 | None:intergenic | 40.0% | |
AATGCGCAATTTAAGTCACG+TGG | - | chr7.1:77325366-77325385 | MS.gene23881:intron | 40.0% | |
AGAGCAGAATTCCCAATATG+TGG | - | chr7.1:77326449-77326468 | MS.gene23881:intron | 40.0% | |
AGCTGCGGAAGTTAAAGATT+AGG | + | chr7.1:77327368-77327387 | None:intergenic | 40.0% | |
ATAGCTGCAGCGATATGTAA+AGG | + | chr7.1:77324654-77324673 | None:intergenic | 40.0% | |
ATCACGGAATTGACATGTGT+AGG | + | chr7.1:77328995-77329014 | None:intergenic | 40.0% | |
ATCACTTATCCAATCCTCGT+AGG | - | chr7.1:77327409-77327428 | MS.gene23881:intron | 40.0% | |
CAAAATGACGTGAATCACCA+CGG | + | chr7.1:77329050-77329069 | None:intergenic | 40.0% | |
CAGAATTCCCAATATGTGGA+GGG | - | chr7.1:77326453-77326472 | MS.gene23881:intron | 40.0% | |
CAGAGTCTCCAAATCCAAAA+GGG | - | chr7.1:77327261-77327280 | MS.gene23881:intron | 40.0% | |
CCATTGAATACTTGACTGTG+AGG | - | chr7.1:77324925-77324944 | MS.gene23881:CDS | 40.0% | |
CCTCACAGTCAAGTATTCAA+TGG | + | chr7.1:77324928-77324947 | None:intergenic | 40.0% | |
CGTTGAAACCATCATTTGCT+TGG | - | chr7.1:77324706-77324725 | MS.gene23881:CDS | 40.0% | |
CTAACCTGATAAATTCCACC+AGG | + | chr7.1:77328722-77328741 | None:intergenic | 40.0% | |
CTTGCACATAGGTTCAAGAT+TGG | - | chr7.1:77328581-77328600 | MS.gene23881:CDS | 40.0% | |
GAAGGGCAGAAATCACATAT+TGG | + | chr7.1:77325273-77325292 | None:intergenic | 40.0% | |
GAATGGTGTCTTATGCTCAA+GGG | - | chr7.1:77329069-77329088 | MS.gene23881:CDS | 40.0% | |
GGAATTTATCAGGTTAGTGC+TGG | - | chr7.1:77328725-77328744 | MS.gene23881:CDS | 40.0% | |
TACCCACGGTAAAAAGTTTC+TGG | - | chr7.1:77325917-77325936 | MS.gene23881:intron | 40.0% | |
TCACGGAATTGACATGTGTA+GGG | + | chr7.1:77328994-77329013 | None:intergenic | 40.0% | |
TCAGAGTCTCCAAATCCAAA+AGG | - | chr7.1:77327260-77327279 | MS.gene23881:intron | 40.0% | |
TGAATGGTGTCTTATGCTCA+AGG | - | chr7.1:77329068-77329087 | MS.gene23881:CDS | 40.0% | |
TGAGGATGATCCATTCATTC+TGG | - | chr7.1:77324596-77324615 | MS.gene23881:CDS | 40.0% | |
TTACATATCGCTGCAGCTAT+GGG | - | chr7.1:77324654-77324673 | MS.gene23881:CDS | 40.0% | |
TTGAACCTATGTGCAAGTGT+GGG | + | chr7.1:77328578-77328597 | None:intergenic | 40.0% | |
TTTACATATCGCTGCAGCTA+TGG | - | chr7.1:77324653-77324672 | MS.gene23881:CDS | 40.0% | |
! | ACTCCAGAAACTTTTTACCG+TGG | + | chr7.1:77325923-77325942 | None:intergenic | 40.0% |
! | AGTTTTTACACTTTGTCCGG+TGG | + | chr7.1:77327132-77327151 | None:intergenic | 40.0% |
! | CTATTTTACCCCAAGAAGGT+TGG | + | chr7.1:77325811-77325830 | None:intergenic | 40.0% |
! | CTCACTATTTTACCCCAAGA+AGG | + | chr7.1:77325815-77325834 | None:intergenic | 40.0% |
! | CTCCAGAAACTTTTTACCGT+GGG | + | chr7.1:77325922-77325941 | None:intergenic | 40.0% |
! | GAAGTGTCATACCTAACACA+AGG | - | chr7.1:77327621-77327640 | MS.gene23881:intron | 40.0% |
! | GGGAACATTCATTTCCCTTT+TGG | + | chr7.1:77327278-77327297 | None:intergenic | 40.0% |
! | GTGCATTGATATGTGTGACA+AGG | - | chr7.1:77328133-77328152 | MS.gene23881:intron | 40.0% |
! | TTTTGCATAGCGAGATGGAT+GGG | + | chr7.1:77324756-77324775 | None:intergenic | 40.0% |
!! | TGTTCTTCAGTTTTGACCAC+CGG | - | chr7.1:77326269-77326288 | MS.gene23881:intron | 40.0% |
!! | TTGCGCTACTTAACTTGTGT+TGG | + | chr7.1:77325392-77325411 | None:intergenic | 40.0% |
AAATAGATGGTTGGACCGTC+GGG | - | chr7.1:77325245-77325264 | MS.gene23881:intron | 45.0% | |
AACATCATATGTCCACCTGC+TGG | + | chr7.1:77328908-77328927 | None:intergenic | 45.0% | |
AATAGTGAGCAGCCTTCTTG+GGG | - | chr7.1:77325826-77325845 | MS.gene23881:intron | 45.0% | |
AATGAGAAGCTGTTGAGAGC+AGG | - | chr7.1:77326634-77326653 | MS.gene23881:intron | 45.0% | |
ACAATAGTGAGTAGCCGACT+TGG | + | chr7.1:77325990-77326009 | None:intergenic | 45.0% | |
ACATGTTTCGGACTGACCTA+AGG | + | chr7.1:77327873-77327892 | None:intergenic | 45.0% | |
ACATTCAATGGACGGCGAAT+AGG | + | chr7.1:77326909-77326928 | None:intergenic | 45.0% | |
ACCTGATAAATTCCACCAGG+AGG | + | chr7.1:77328719-77328738 | None:intergenic | 45.0% | |
ACTCGATCCCTCCACATATT+GGG | + | chr7.1:77326463-77326482 | None:intergenic | 45.0% | |
AGAAATAGAGGGAGAGAGTG+AGG | - | chr7.1:77326074-77326093 | MS.gene23881:intron | 45.0% | |
AGCACAGGCAGTTCAATTGT+TGG | - | chr7.1:77328421-77328440 | MS.gene23881:intron | 45.0% | |
AGCGATAAACCAGACGTTTG+TGG | + | chr7.1:77324782-77324801 | None:intergenic | 45.0% | |
AGTTGATCACTTCCCCAAGT+CGG | - | chr7.1:77325973-77325992 | MS.gene23881:intron | 45.0% | |
ATTCAATGGACGGCGAATAG+GGG | + | chr7.1:77326907-77326926 | None:intergenic | 45.0% | |
ATTTCTGCTCCAGGAAATGC+TGG | - | chr7.1:77328788-77328807 | MS.gene23881:CDS | 45.0% | |
CACGGAATTGACATGTGTAG+GGG | + | chr7.1:77328993-77329012 | None:intergenic | 45.0% | |
CATCCTCAATTACTGCGTAG+AGG | + | chr7.1:77324584-77324603 | None:intergenic | 45.0% | |
CATTCAATGGACGGCGAATA+GGG | + | chr7.1:77326908-77326927 | None:intergenic | 45.0% | |
CCAGCCAACAAGTACTTGAA+GGG | + | chr7.1:77324997-77325016 | None:intergenic | 45.0% | |
CTTGAACCTATGTGCAAGTG+TGG | + | chr7.1:77328579-77328598 | None:intergenic | 45.0% | |
GACTGACCTAAGGTCCAATA+TGG | + | chr7.1:77327863-77327882 | None:intergenic | 45.0% | |
GCAAAACAACCACAAACGTC+TGG | - | chr7.1:77324770-77324789 | MS.gene23881:CDS | 45.0% | |
GCAACTGCCATCTATCAATC+AGG | - | chr7.1:77328686-77328705 | MS.gene23881:CDS | 45.0% | |
GCAGAATTCCCAATATGTGG+AGG | - | chr7.1:77326452-77326471 | MS.gene23881:intron | 45.0% | |
GGAGAAAGTGATATGGTGTG+AGG | - | chr7.1:77326101-77326120 | MS.gene23881:intron | 45.0% | |
GGTTCAAGATTGGACGTAGA+CGG | - | chr7.1:77328591-77328610 | MS.gene23881:CDS | 45.0% | |
GTACGAACGTGAGTAACTCT+CGG | - | chr7.1:77327717-77327736 | MS.gene23881:intron | 45.0% | |
TATCTTATGGTACCAGCAGG+TGG | - | chr7.1:77328893-77328912 | MS.gene23881:CDS | 45.0% | |
TCCTCCTGGTGGAATTTATC+AGG | - | chr7.1:77328715-77328734 | MS.gene23881:CDS | 45.0% | |
TCGGGCATTATCCTTGTGTT+AGG | + | chr7.1:77327635-77327654 | None:intergenic | 45.0% | |
TCTCCTCTACGCAGTAATTG+AGG | - | chr7.1:77324578-77324597 | MS.gene23881:CDS | 45.0% | |
TGATTCGAACGGAGCCATAT+TGG | - | chr7.1:77327846-77327865 | MS.gene23881:intron | 45.0% | |
TTAAACAAGAGGGATGAGGC+AGG | - | chr7.1:77325065-77325084 | MS.gene23881:CDS | 45.0% | |
TTTCTGCTCCAGGAAATGCT+GGG | - | chr7.1:77328789-77328808 | MS.gene23881:CDS | 45.0% | |
TTTGCATAGCGAGATGGATG+GGG | + | chr7.1:77324755-77324774 | None:intergenic | 45.0% | |
! | ACTGATTTCCCAGCATTTCC+TGG | + | chr7.1:77328800-77328819 | None:intergenic | 45.0% |
! | CAATAGTGAGTAGCCGACTT+GGG | + | chr7.1:77325989-77326008 | None:intergenic | 45.0% |
! | CTTGATAGTCTAGCCCTACT+AGG | + | chr7.1:77327671-77327690 | None:intergenic | 45.0% |
! | GGACTCTAGTCTGATTCGAA+CGG | - | chr7.1:77327835-77327854 | MS.gene23881:intron | 45.0% |
! | GTTTTGCATAGCGAGATGGA+TGG | + | chr7.1:77324757-77324776 | None:intergenic | 45.0% |
! | TTTCTAGTGGCTTCTCCAGT+GGG | - | chr7.1:77328926-77328945 | MS.gene23881:CDS | 45.0% |
!! | AATAGTGAGTAGCCGACTTG+GGG | + | chr7.1:77325988-77326007 | None:intergenic | 45.0% |
!! | ATCATGTCGACTCTTAGCTG+CGG | + | chr7.1:77327383-77327402 | None:intergenic | 45.0% |
!! | GGTTGTTTTGCATAGCGAGA+TGG | + | chr7.1:77324761-77324780 | None:intergenic | 45.0% |
!! | GTTAGTGCTGGTGATGACAA+TGG | - | chr7.1:77328737-77328756 | MS.gene23881:CDS | 45.0% |
!!! | GGTCACTTTTTACCCCAAGA+GGG | + | chr7.1:77325790-77325809 | None:intergenic | 45.0% |
!!! | TGGTCACTTTTTACCCCAAG+AGG | + | chr7.1:77325791-77325810 | None:intergenic | 45.0% |
!! | TAAATACAAATATAAATAAA+AGG | - | chr7.1:77325583-77325602 | MS.gene23881:intron | 5.0% |
!!! | TAATTTTATTAAATTAAAAG+AGG | + | chr7.1:77326947-77326966 | None:intergenic | 5.0% |
AATAGAGGGAGAGAGTGAGG+AGG | - | chr7.1:77326077-77326096 | MS.gene23881:intron | 50.0% | |
ACGGAGCCATATTGGACCTT+AGG | - | chr7.1:77327854-77327873 | MS.gene23881:intron | 50.0% | |
AGGAGGGGGAGAAAGTGATA+TGG | - | chr7.1:77326094-77326113 | MS.gene23881:intron | 50.0% | |
ATAGAGGGAGAGAGTGAGGA+GGG | - | chr7.1:77326078-77326097 | MS.gene23881:intron | 50.0% | |
ATGCTCCCACACTTGCACAT+AGG | - | chr7.1:77328570-77328589 | MS.gene23881:CDS | 50.0% | |
CAAGAGCTTCTCACGGGTTT+GGG | + | chr7.1:77327786-77327805 | None:intergenic | 50.0% | |
CAATCAGGATTGAGTCCTCC+TGG | - | chr7.1:77328701-77328720 | MS.gene23881:CDS | 50.0% | |
CAGAGGAGAACCGTAACACT+TGG | - | chr7.1:77328642-77328661 | MS.gene23881:CDS | 50.0% | |
CTAAAAGCTGCAGCTCAAGC+AGG | - | chr7.1:77324546-77324565 | MS.gene23881:CDS | 50.0% | |
CTGAGAACACGTGTAGCGAT+AGG | - | chr7.1:77325017-77325036 | MS.gene23881:CDS | 50.0% | |
GAACTACCCTCGACCTTCAT+AGG | - | chr7.1:77327750-77327769 | MS.gene23881:intron | 50.0% | |
GACTCGATCCCTCCACATAT+TGG | + | chr7.1:77326464-77326483 | None:intergenic | 50.0% | |
GAGGCCCTTCAAGTACTTGT+TGG | - | chr7.1:77324990-77325009 | MS.gene23881:CDS | 50.0% | |
GCATGAGCGACTTCTAAGCT+AGG | + | chr7.1:77328554-77328573 | None:intergenic | 50.0% | |
GCCAGCCAACAAGTACTTGA+AGG | + | chr7.1:77324998-77325017 | None:intergenic | 50.0% | |
GGGATTACTCACGCCTATGA+AGG | + | chr7.1:77327766-77327785 | None:intergenic | 50.0% | |
TAGTAGCTGCCTACGAGGAT+TGG | + | chr7.1:77327421-77327440 | None:intergenic | 50.0% | |
TATGCGGCTATAGTGTGCGT+AGG | - | chr7.1:77327599-77327618 | MS.gene23881:intron | 50.0% | |
TATGCTAGTAGCTGCCTACG+AGG | + | chr7.1:77327426-77327445 | None:intergenic | 50.0% | |
TGACTTAACTCACGCACCAC+TGG | + | chr7.1:77326325-77326344 | None:intergenic | 50.0% | |
TGCGCTAGTTAACTAGCGCA+GGG | + | chr7.1:77325355-77325336 | None:intergenic | 50.0% | |
TTGCGCTAGTTAACTAGCGC+AGG | + | chr7.1:77325337-77325356 | None:intergenic | 50.0% | |
! | CCCTTCAAGTACTTGTTGGC+TGG | - | chr7.1:77324994-77325013 | MS.gene23881:CDS | 50.0% |
! | GAGTGTTTTGTGCTGGGGAA+GGG | + | chr7.1:77325290-77325309 | None:intergenic | 50.0% |
! | GCTGGGAAATCAGTCTTGTC+AGG | - | chr7.1:77328806-77328825 | MS.gene23881:CDS | 50.0% |
!! | AGAGTGTTTTGTGCTGGGGA+AGG | + | chr7.1:77325291-77325310 | None:intergenic | 50.0% |
!! | GTTTCTAGTGGCTTCTCCAG+TGG | - | chr7.1:77328925-77328944 | MS.gene23881:CDS | 50.0% |
!!! | AACTAGCGCAGGGGCATTTT+GGG | + | chr7.1:77325326-77325345 | None:intergenic | 50.0% |
!!! | CGTGAGAGTGTTTTGTGCTG+GGG | + | chr7.1:77325295-77325314 | None:intergenic | 50.0% |
!!! | GCGTGAGAGTGTTTTGTGCT+GGG | + | chr7.1:77325296-77325315 | None:intergenic | 50.0% |
!!! | TAACTAGCGCAGGGGCATTT+TGG | + | chr7.1:77325327-77325346 | None:intergenic | 50.0% |
!!! | TGCGTGAGAGTGTTTTGTGC+TGG | + | chr7.1:77325297-77325316 | None:intergenic | 50.0% |
AACGGGCCAAGAGCTTCTCA+CGG | + | chr7.1:77327793-77327812 | None:intergenic | 55.0% | |
ACTCACGCCTATGAAGGTCG+AGG | + | chr7.1:77327760-77327779 | None:intergenic | 55.0% | |
AGCACTAGGTACTAAGCGCC+AGG | - | chr7.1:77325109-77325128 | MS.gene23881:CDS | 55.0% | |
AGCGATAGGTGCGCAAAAGC+TGG | - | chr7.1:77325031-77325050 | MS.gene23881:CDS | 55.0% | |
CAGCGTGACTTAACTCACGC+TGG | - | chr7.1:77326379-77326398 | MS.gene23881:intron | 55.0% | |
CCAAACCCGTGAGAAGCTCT+TGG | - | chr7.1:77327784-77327803 | MS.gene23881:intron | 55.0% | |
CCAAGAGCTTCTCACGGGTT+TGG | + | chr7.1:77327787-77327806 | None:intergenic | 55.0% | |
CTCACGCCTATGAAGGTCGA+GGG | + | chr7.1:77327759-77327778 | None:intergenic | 55.0% | |
GAAATCATGCTGGGCGAGAG+TGG | - | chr7.1:77326412-77326431 | MS.gene23881:intron | 55.0% | |
GCGAGTTAACTCACGCACGT+TGG | + | chr7.1:77326295-77326314 | None:intergenic | 55.0% | |
GCGCTAGTTAACTAGCGCAG+GGG | + | chr7.1:77325335-77325354 | None:intergenic | 55.0% | |
GCTTGGAAGCTTAACCCGCA+AGG | - | chr7.1:77324723-77324742 | MS.gene23881:CDS | 55.0% | |
GTTAACTCACGCACGTTGGC+CGG | + | chr7.1:77326291-77326310 | None:intergenic | 55.0% | |
TAGAGGGAGAGAGTGAGGAG+GGG | - | chr7.1:77326079-77326098 | MS.gene23881:intron | 55.0% | |
TAGTGGCTTCTCCAGTGGGT+TGG | - | chr7.1:77328930-77328949 | MS.gene23881:CDS | 55.0% | |
TCAGGATTGAGTCCTCCTGG+TGG | - | chr7.1:77328704-77328723 | MS.gene23881:CDS | 55.0% | |
TGGATGGGGCTGAATCCTTG+CGG | + | chr7.1:77324741-77324760 | None:intergenic | 55.0% | |
TTAACTCGCGCACATGCCAG+TGG | - | chr7.1:77326306-77326325 | MS.gene23881:intron | 55.0% | |
ACGGGCCAAGAGCTTCTCAC+GGG | + | chr7.1:77327792-77327811 | None:intergenic | 60.0% | |
AGAGGGAGAGAGTGAGGAGG+GGG | - | chr7.1:77326080-77326099 | MS.gene23881:intron | 60.0% | |
GGATGGGGCTGAATCCTTGC+GGG | + | chr7.1:77324740-77324759 | None:intergenic | 60.0% | |
! | CTAGCGCTGAACCAACCCAC+TGG | + | chr7.1:77328944-77328963 | None:intergenic | 60.0% |
! | GCGAGAGTGGTTTGTGCTGG+GGG | - | chr7.1:77326425-77326444 | MS.gene23881:intron | 60.0% |
! | GGCGAGAGTGGTTTGTGCTG+GGG | - | chr7.1:77326424-77326443 | MS.gene23881:intron | 60.0% |
! | GGGCGAGAGTGGTTTGTGCT+GGG | - | chr7.1:77326423-77326442 | MS.gene23881:intron | 60.0% |
! | TGGGCGAGAGTGGTTTGTGC+TGG | - | chr7.1:77326422-77326441 | MS.gene23881:intron | 60.0% |
!!! | GCGCAGGGGCATTTTGGGTA+TGG | + | chr7.1:77325321-77325340 | None:intergenic | 60.0% |
AACTCACGCACGTTGGCCGG+TGG | + | chr7.1:77326288-77326307 | None:intergenic | 65.0% |
Chromosome | Type | Strat | End | Strand | Name |
---|---|---|---|---|---|
chr7.1 | gene | 77324522 | 77329135 | 77324522 | ID=MS.gene23881 |
chr7.1 | mRNA | 77324522 | 77329135 | 77324522 | ID=MS.gene23881.t1;Parent=MS.gene23881 |
chr7.1 | exon | 77328527 | 77329135 | 77328527 | ID=MS.gene23881.t1.exon1;Parent=MS.gene23881.t1 |
chr7.1 | CDS | 77328527 | 77329135 | 77328527 | ID=cds.MS.gene23881.t1;Parent=MS.gene23881.t1 |
chr7.1 | exon | 77324522 | 77325229 | 77324522 | ID=MS.gene23881.t1.exon2;Parent=MS.gene23881.t1 |
chr7.1 | CDS | 77324522 | 77325229 | 77324522 | ID=cds.MS.gene23881.t1;Parent=MS.gene23881.t1 |
Gene Sequence |
Protein sequence |