AlfalfaGEDB | MS.gene066467

M. sativa cultivar XinJiangDaYe / MS.gene066467

KEGG: -
GO: GO:0003674 GO:0005488 GO:0005515
PFAM: PF12796.10 PF13606.9 PF13857.9 PF13962.9

Nr:

Query id	Subject id	identity %	alignment length	mismatches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
MS.gene066467.t1	XP_003629044.1	88.7	345	37	1	1	345	1	343	9.10E-109	403.7

Swissprot:

Query id	Subject id	identity %	alignment length	mismatches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
MS.gene066467.t1	Q8GYH5	50.5	303	141	3	11	306	4	304	4.2e-22	107.1

Trembl:

Query id	Subject id	identity %	alignment length	mismatches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
MS.gene066467.t1	G7L7W8	88.7	345	37	1	1	345	1	343	6.5e-109	403.7

TFs/TRs:

Gene ID	Type	Classification

Protein Kinases:

Gene ID	Type	Classification

Network:

Co-expression Network:

Gene1	Gene2	correlation coefficient	p_value	FDR

PPI:

Gene1	Gene2	Type
MS.gene066467	MS.gene25244	PPI
MS.gene69687	MS.gene066467	PPI
MS.gene035805	MS.gene066467	PPI
MS.gene066467	MS.gene48655	PPI
MS.gene066467	MS.gene09785	PPI
MS.gene066467	MS.gene64441	PPI
MS.gene066467	MS.gene066046	PPI
MS.gene066467	MS.gene007486	PPI
MS.gene23810	MS.gene066467	PPI
MS.gene066467	MS.gene027073	PPI
MS.gene066467	MS.gene34712	PPI
MS.gene78281	MS.gene066467	PPI
MS.gene066467	MS.gene65463	PPI
MS.gene066467	MS.gene007485	PPI
MS.gene066467	MS.gene007487	PPI
MS.gene066467	MS.gene037184	PPI
MS.gene066467	MS.gene23196	PPI
MS.gene24806	MS.gene066467	PPI
MS.gene071113	MS.gene066467	PPI
MS.gene066467	MS.gene067705	PPI
MS.gene066467	MS.gene41291	PPI
MS.gene027071	MS.gene066467	PPI
MS.gene066467	MS.gene042783	PPI
MS.gene30433	MS.gene066467	PPI
MS.gene066467	MS.gene027075	PPI
MS.gene066464	MS.gene066467	PPI
MS.gene066467	MS.gene30174	PPI
MS.gene066467	MS.gene26021	PPI
MS.gene066467	MS.gene050456	PPI
MS.gene07706	MS.gene066467	PPI
MS.gene027074	MS.gene066467	PPI
MS.gene066467	MS.gene064542	PPI
MS.gene066467	MS.gene91775	PPI
MS.gene066467	MS.gene25515	PPI
MS.gene010912	MS.gene066467	PPI
MS.gene066467	MS.gene34651	PPI
MS.gene23811	MS.gene066467	PPI
MS.gene066467	MS.gene22482	PPI
MS.gene066467	MS.gene050270	PPI
MS.gene51335	MS.gene066467	PPI
MS.gene066467	MS.gene052956	PPI
MS.gene066467	MS.gene60920	PPI
MS.gene005995	MS.gene066467	PPI
MS.gene037950	MS.gene066467	PPI
MS.gene066467	MS.gene34009	PPI
MS.gene066467	MS.gene018518	PPI
MS.gene066467	MS.gene043662	PPI
MS.gene068249	MS.gene066467	PPI
MS.gene066467	MS.gene065848	PPI
MS.gene066467	MS.gene004844	PPI
MS.gene051003	MS.gene066467	PPI
MS.gene066467	MS.gene99588	PPI
MS.gene066467	MS.gene54764	PPI
MS.gene066467	MS.gene038519	PPI
MS.gene066467	MS.gene27223	PPI
MS.gene066467	MS.gene39623	PPI
MS.gene066467	MS.gene25024	PPI
MS.gene066467	MS.gene26019	PPI
MS.gene066467	MS.gene050272	PPI
MS.gene066467	MS.gene63085	PPI
MS.gene066467	MS.gene30176	PPI
MS.gene039682	MS.gene066467	PPI
MS.gene066467	MS.gene51258	PPI
MS.gene061932	MS.gene066467	PPI
MS.gene066467	MS.gene32723	PPI
MS.gene066467	MS.gene02469	PPI
MS.gene24922	MS.gene066467	PPI
MS.gene066467	MS.gene053363	PPI
MS.gene47479	MS.gene066467	PPI
MS.gene066467	MS.gene024753	PPI
MS.gene008767	MS.gene066467	PPI
MS.gene066467	MS.gene32726	PPI
MS.gene066467	MS.gene71122	PPI
MS.gene71204	MS.gene066467	PPI
MS.gene066467	MS.gene73119	PPI
MS.gene066467	MS.gene92243	PPI
MS.gene066467	MS.gene85534	PPI
MS.gene36842	MS.gene066467	PPI
MS.gene066467	MS.gene51262	PPI
MS.gene066467	MS.gene23881	PPI
MS.gene066467	MS.gene26672	PPI
MS.gene066467	MS.gene014931	PPI
MS.gene058128	MS.gene066467	PPI
MS.gene066467	MS.gene062662	PPI
MS.gene066467	MS.gene21888	PPI
MS.gene066467	MS.gene97379	PPI
MS.gene066501	MS.gene066467	PPI
MS.gene066467	MS.gene066500	PPI
MS.gene63085	MS.gene066467	PPI
MS.gene056455	MS.gene066467	PPI
MS.gene89986	MS.gene066467	PPI
MS.gene066467	MS.gene90400	PPI
MS.gene066467	MS.gene022109	PPI
MS.gene066467	MS.gene82740	PPI
MS.gene066467	MS.gene041770	PPI
MS.gene69965	MS.gene066467	PPI
MS.gene066467	MS.gene81055	PPI
MS.gene066467	MS.gene65775	PPI
MS.gene066467	MS.gene99554	PPI
MS.gene066467	MS.gene80163	PPI
MS.gene26532	MS.gene066467	PPI
MS.gene066467	MS.gene33377	PPI
MS.gene066467	MS.gene045937	PPI
MS.gene066467	MS.gene027072	PPI
MS.gene066467	MS.gene51278	PPI
MS.gene066467	MS.gene69966	PPI
MS.gene30172	MS.gene066467	PPI
MS.gene066467	MS.gene87218	PPI
MS.gene23852	MS.gene066467	PPI
MS.gene97943	MS.gene066467	PPI
MS.gene066467	MS.gene025229	PPI
MS.gene67157	MS.gene066467	PPI
MS.gene066467	MS.gene043742	PPI
MS.gene012203	MS.gene066467	PPI
MS.gene066467	MS.gene027441	PPI
MS.gene066467	MS.gene050457	PPI
MS.gene066467	MS.gene99973	PPI
MS.gene066467	MS.gene21734	PPI
MS.gene010910	MS.gene066467	PPI
MS.gene066467	MS.gene30177	PPI
MS.gene08470	MS.gene066467	PPI
MS.gene066467	MS.gene70008	PPI
MS.gene066467	MS.gene008833	PPI
MS.gene063222	MS.gene066467	PPI

Query id	Subject id	identity %	alignment length	mismatches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
MS.gene066467.t1	MTR_8g072510	88.406	345	38	1	1	345	1	343	0.0	621
MS.gene066467.t1	MTR_8g039620	71.709	357	95	3	1	351	1	357	3.77e-180	506
MS.gene066467.t1	MTR_3g016210	70.000	360	91	3	1	345	1	358	1.77e-177	500
MS.gene066467.t1	MTR_7g021090	70.605	347	85	3	5	345	2	337	1.27e-175	494
MS.gene066467.t1	MTR_8g062410	74.063	347	79	4	1	345	1	338	1.89e-175	495
MS.gene066467.t1	MTR_1g059930	68.696	345	107	1	1	344	1	345	6.18e-166	470
MS.gene066467.t1	MTR_8g068990	65.706	347	102	3	1	344	1	333	4.12e-161	459
MS.gene066467.t1	MTR_7g451420	68.810	311	97	0	5	315	2	312	3.40e-154	436
MS.gene066467.t1	MTR_8g073260	63.953	344	121	2	1	344	1	341	9.29e-153	437
MS.gene066467.t1	MTR_8g069880	65.089	338	116	2	8	344	3	339	8.95e-149	428
MS.gene066467.t1	MTR_8g040930	67.347	294	93	1	54	344	1	294	1.19e-140	404
MS.gene066467.t1	MTR_8g041240	67.347	294	93	1	54	344	1	294	1.19e-140	404
MS.gene066467.t1	MTR_8g066670	62.717	346	124	3	1	345	1067	1408	1.92e-137	426
MS.gene066467.t1	MTR_8g467780	59.195	348	131	3	11	347	10	357	3.79e-134	390
MS.gene066467.t1	MTR_3g105650	52.258	310	140	2	10	312	3	311	1.97e-109	326
MS.gene066467.t1	MTR_8g073275	46.089	358	116	7	54	344	1	348	8.14e-90	277
MS.gene066467.t1	MTR_1g069110	26.316	323	209	8	12	327	18	318	5.11e-26	108
MS.gene066467.t1	MTR_7g099580	25.697	323	162	9	24	329	24	285	9.04e-24	100
MS.gene066467.t1	MTR_2g101320	28.054	221	141	4	43	255	137	347	2.27e-21	95.9
MS.gene066467.t1	MTR_7g099570	29.016	193	123	3	12	199	9	192	3.94e-20	92.0
MS.gene066467.t1	MTR_2g101310	31.250	192	121	3	43	233	137	318	3.63e-18	86.3
MS.gene066467.t1	MTR_2g101310	23.143	350	216	9	12	315	142	484	6.00e-12	67.4
MS.gene066467.t1	MTR_2g101310	31.250	192	121	3	43	233	137	318	6.61e-18	85.1
MS.gene066467.t1	MTR_2g101310	23.143	350	216	9	12	315	142	484	3.44e-12	67.8
MS.gene066467.t1	MTR_7g117620	23.693	287	185	5	47	311	119	393	7.37e-16	79.0
MS.gene066467.t1	MTR_1g115575	23.853	327	207	9	12	312	135	445	6.25e-15	76.3
MS.gene066467.t1	MTR_1g032100	23.103	290	186	6	47	311	94	371	2.61e-14	74.3
MS.gene066467.t1	MTR_2g096190	22.659	331	219	6	5	311	63	380	3.42e-14	73.9
MS.gene066467.t1	MTR_8g105260	23.103	290	186	5	47	311	101	378	3.86e-14	73.9
MS.gene066467.t1	MTR_4g062100	22.727	330	206	8	12	311	74	384	2.18e-13	71.6
MS.gene066467.t1	MTR_5g085500	30.323	155	96	4	81	231	8	154	5.62e-13	70.1
MS.gene066467.t1	MTR_5g085480	25.000	244	163	6	12	247	214	445	7.35e-13	70.1
MS.gene066467.t1	MTR_5g085480	25.000	244	163	6	12	247	54	285	1.15e-12	69.3
MS.gene066467.t1	MTR_5g085810	27.746	173	117	4	63	233	320	486	5.81e-12	67.4
MS.gene066467.t1	MTR_6g027840	30.102	196	123	8	47	232	246	437	2.11e-11	65.5

Query id	Subject id	identity %	alignment length	mismatches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
MS.gene066467.t1	AT4G10720	42.138	318	176	2	11	320	4	321	6.74e-82	255
MS.gene066467.t1	AT4G10720	42.138	318	176	2	11	320	4	321	1.65e-81	255
MS.gene066467.t1	AT1G14480	40.000	325	179	4	11	322	4	325	5.17e-79	249
MS.gene066467.t1	AT1G14500	38.820	322	188	2	11	323	4	325	2.14e-78	247
MS.gene066467.t1	AT5G15500	42.258	310	171	3	12	313	6	315	9.93e-78	246
MS.gene066467.t1	AT5G54620	40.523	306	175	2	11	309	4	309	1.23e-71	229
MS.gene066467.t1	AT5G54610	36.304	303	184	3	11	306	4	304	2.21e-64	211
MS.gene066467.t1	AT1G14480	35.556	315	164	5	11	322	4	282	6.20e-58	193
MS.gene066467.t1	AT5G15500	36.364	209	125	3	113	313	1	209	1.01e-32	125
MS.gene066467.t1	AT5G51160	28.832	274	167	4	66	318	35	301	2.29e-30	120
MS.gene066467.t1	AT5G54700	28.136	295	141	11	27	319	20	245	6.73e-18	85.1
MS.gene066467.t1	AT1G34050	25.912	274	177	8	56	315	162	423	1.22e-17	84.7
MS.gene066467.t1	AT4G03500	23.123	333	174	8	33	312	199	502	1.54e-17	84.3
MS.gene066467.t1	AT4G03500	23.123	333	174	8	33	312	176	479	1.65e-17	84.3
MS.gene066467.t1	AT4G03500	23.123	333	174	8	33	312	176	479	1.65e-17	84.3
MS.gene066467.t1	AT4G03460	29.412	221	121	5	103	312	290	486	3.30e-17	83.6
MS.gene066467.t1	AT4G03460	29.412	221	121	5	103	312	258	454	4.12e-17	83.2
MS.gene066467.t1	AT2G01680	22.697	304	198	5	47	325	97	388	1.10e-16	81.6
MS.gene066467.t1	AT1G10340	26.692	266	155	7	82	315	175	432	2.57e-15	77.4
MS.gene066467.t1	AT1G10340	26.692	266	155	7	82	315	171	428	2.98e-15	77.4
MS.gene066467.t1	AT5G54710	24.468	376	204	13	1	315	140	496	5.91e-14	73.6
MS.gene066467.t1	AT5G54710	24.468	376	204	13	1	315	95	451	6.60e-14	73.2
MS.gene066467.t1	AT1G03670	28.017	232	118	8	104	318	279	478	2.73e-13	71.2
MS.gene066467.t1	AT3G09550	24.699	332	198	10	12	312	147	457	9.23e-13	69.7
MS.gene066467.t1	AT3G09550	24.699	332	198	10	12	312	147	457	9.23e-13	69.7
MS.gene066467.t1	AT3G09550	24.699	332	198	10	12	312	154	464	9.30e-13	69.7
MS.gene066467.t1	AT3G12360	24.232	293	179	8	47	312	167	443	1.16e-11	66.2
MS.gene066467.t1	AT3G12360	24.232	293	179	8	47	312	155	431	1.17e-11	66.2
MS.gene066467.t1	AT1G07710	25.610	328	173	11	7	311	100	379	1.58e-11	65.9
MS.gene066467.t1	AT1G07710	25.610	328	173	11	7	311	100	379	1.58e-11	65.9
MS.gene066467.t1	AT4G03480	23.053	321	167	11	12	313	360	619	2.64e-11	65.5
MS.gene066467.t1	AT4G03480	22.430	321	169	10	12	313	357	616	2.73e-11	65.5

Find 69 sgRNAs with CRISPR-Local

Find 90 sgRNAs with CRISPR-GE

CRISPR-Local

CRISPR-Local
sgRNA_sequence	on_target_score	Position	Region
AAAGACCTTGTTAGAGTTAA+AGG	0.117136	8.2:-31606196	MS.gene066467:CDS
TCAAGATGATCCATACGTTT+TGG	0.300125	8.2:-31606416	MS.gene066467:CDS
AACACCACAAACACAAATAA+TGG	0.318375	8.2:-31606496	MS.gene066467:CDS
TGGGGTAGAAATGGTAAAAT+TGG	0.321057	8.2:+31605414	None:intergenic
ACTGATTTCCCAACATTTCC+TGG	0.324820	8.2:+31605394	None:intergenic
GTTCATTCTTAACAGCAATA+TGG	0.326006	8.2:+31606050	None:intergenic
TGCTGCATCCATGGGTCATA+TGG	0.349179	8.2:-31606350	MS.gene066467:CDS
ATCTCCATTATTTGTGTTTG+TGG	0.350305	8.2:+31606492	None:intergenic
AGATTTGAAGGCAAAGAATA+TGG	0.376286	8.2:-31605749	MS.gene066467:CDS
CTTTCTAGTGGTTTCTCCAA+TGG	0.383314	8.2:-31605269	MS.gene066467:CDS
TTTCTAGTGGTTTCTCCAAT+GGG	0.385199	8.2:-31605268	MS.gene066467:CDS
TTTACATATTGCTGCATCCA+TGG	0.394377	8.2:-31606359	MS.gene066467:CDS
TAGTGCTGAAATATGCAAAA+TGG	0.398549	8.2:+31605919	None:intergenic
TTTCAAATTCATAATTTCAA+TGG	0.401833	8.2:+31606321	None:intergenic
AAAATAAAATATTAAACAAA+AGG	0.410662	8.2:-31605958	MS.gene066467:CDS
GTTGGGAAATCAGTCTTGTC+AGG	0.412181	8.2:-31605385	MS.gene066467:CDS
GTCAAGTATTCAATGGATTC+CGG	0.412377	8.2:+31606094	None:intergenic
AACATTTCCTGGGGTAGAAA+TGG	0.413623	8.2:+31605405	None:intergenic
CTCTTCAAGTACTTGTTAGC+TGG	0.417708	8.2:-31606018	MS.gene066467:CDS
TAACTTTCTCCGTGTGTGTC+CGG	0.446558	8.2:-31606113	MS.gene066467:CDS
TGTAAAGGAGTTTCAACAAA+TGG	0.448723	8.2:+31606376	None:intergenic
TTTAGTTTCAAAGCAAATGA+AGG	0.453815	8.2:+31606298	None:intergenic
AATATTAAACAAAAGGGATA+AGG	0.458522	8.2:-31605951	MS.gene066467:CDS
AAATAAAATATTAAACAAAA+GGG	0.459549	8.2:-31605957	MS.gene066467:CDS
ACAGAGAGGGGCTCAAAAGC+TGG	0.461989	8.2:-31605981	MS.gene066467:CDS
AGCACAGGCACTTCTATTGT+TGG	0.470486	8.2:-31605785	MS.gene066467:intron
ACTCAATGCTGATTGATAGA+TGG	0.480622	8.2:+31605495	None:intergenic
TTGAAAGCTGCAGCTGAAGC+AGG	0.480701	8.2:-31606466	MS.gene066467:CDS
GATCACAATGATGGATGCTC+TGG	0.483108	8.2:-31605602	MS.gene066467:CDS
AAATACTAGTATAGATTTGA+AGG	0.484650	8.2:-31605761	MS.gene066467:CDS
AAGATCAAAGATCACAATGA+TGG	0.485902	8.2:-31605611	MS.gene066467:CDS
TAGTGGTTTCTCCAATGGGT+TGG	0.489191	8.2:-31605264	MS.gene066467:CDS
TTTCTACCCCAGGAAATGTT+GGG	0.494162	8.2:-31605402	MS.gene066467:CDS
AATAATGTACTCTTGATCTC+TGG	0.495445	8.2:+31605694	None:intergenic
CTGATTTCCCAACATTTCCT+GGG	0.500204	8.2:+31605395	None:intergenic
ATTTCTACCCCAGGAAATGT+TGG	0.503031	8.2:-31605403	MS.gene066467:CDS
CTCTTCCTTTAACTCTAACA+AGG	0.506203	8.2:+31606191	None:intergenic
CCTCACAGTCAAGTATTCAA+TGG	0.507786	8.2:+31606087	None:intergenic
GTTAGAGTTAAAGGAAGAGA+AGG	0.510047	8.2:-31606187	MS.gene066467:CDS
AAGAGTACATTATTAAGTGT+TGG	0.510773	8.2:-31605685	MS.gene066467:CDS
TGTTAAGAATGAACAATATG+AGG	0.511815	8.2:-31606041	MS.gene066467:CDS
TTACATATTGCTGCATCCAT+GGG	0.527095	8.2:-31606358	MS.gene066467:CDS
TCTATACGCTCCAAAACGTA+TGG	0.533250	8.2:+31606406	None:intergenic
TCTTATTCTATGATCAAATG+TGG	0.536536	8.2:+31605630	None:intergenic
ATTTGACTTGCAAAATGAAG+AGG	0.544774	8.2:+31606157	None:intergenic
GGTAGAAATGGTAAAATTGG+AGG	0.549602	8.2:+31605417	None:intergenic
CAGAGGAGCAACGTAACACT+TGG	0.565419	8.2:-31605546	MS.gene066467:CDS
TAATCAGTGACTTCTAAGCT+AGG	0.572613	8.2:+31605655	None:intergenic
GGCAAAGTCCATATGACCCA+TGG	0.574751	8.2:+31606342	None:intergenic
ATGGATGCAGCAATATGTAA+AGG	0.578412	8.2:+31606361	None:intergenic
TTAAACAAAAGGGATAAGGC+AGG	0.594049	8.2:-31605947	MS.gene066467:CDS
TTTGCATAGCGAGATGGATG+GGG	0.598780	8.2:+31606260	None:intergenic
AGCACTAAGTAGTGACCCAC+AGG	0.605991	8.2:-31605903	MS.gene066467:intron
CTAACCTGATAAATTCCACC+GGG	0.607279	8.2:+31605469	None:intergenic
CTTATTCTATGATCAAATGT+GGG	0.616818	8.2:+31605631	None:intergenic
ACTAACCTGATAAATTCCAC+CGG	0.617401	8.2:+31605468	None:intergenic
CAATGGATTCCGGACACACA+CGG	0.617800	8.2:+31606104	None:intergenic
CTAGCGGTAAACCAACCCAT+TGG	0.623589	8.2:+31605253	None:intergenic
TTGGGAAATCAGTCTTGTCA+GGG	0.629970	8.2:-31605384	MS.gene066467:intron
CATCTTGAATTACTGCGTAG+AGG	0.646104	8.2:+31606431	None:intergenic
GCTTTGAAACTAAATCCGCA+AGG	0.657883	8.2:-31606289	MS.gene066467:CDS
TGATTTCCCAACATTTCCTG+GGG	0.666728	8.2:+31605396	None:intergenic
TGGATGGGGCTGAATCCTTG+CGG	0.668802	8.2:+31606274	None:intergenic
AACCTGATAAATTCCACCGG+GGG	0.670751	8.2:+31605471	None:intergenic
CCATTGAATACTTGACTGTG+AGG	0.682234	8.2:-31606087	MS.gene066467:CDS
TGTGTCTGCTATGTCTAATG+CGG	0.699220	8.2:+31605717	None:intergenic
ACCTGATAAATTCCACCGGG+GGG	0.705401	8.2:+31605472	None:intergenic
CATTACAAGAGACATATCAG+AGG	0.719050	8.2:-31605563	MS.gene066467:CDS
TAACCTGATAAATTCCACCG+GGG	0.729886	8.2:+31605470	None:intergenic

CRISPR-GE

badsite warning	sgRNA_sequence	Strand	Position	Region	GC_content
!!	TGTATTATTCATTAATTTCT+TGG	-	chr8.2:31605943-31605962	MS.gene066467:CDS	15.0%
!!	TTTCAAATTCATAATTTCAA+TGG	+	chr8.2:31605434-31605453	None:intergenic	15.0%
!!!	ATATTTTTTATGATACCATA+TGG	-	chr8.2:31606451-31606470	MS.gene066467:CDS	15.0%
!!	AAATACTAGTATAGATTTGA+AGG	-	chr8.2:31605991-31606010	MS.gene066467:CDS	20.0%
!!	AATATTAAACAAAAGGGATA+AGG	-	chr8.2:31605801-31605820	MS.gene066467:intron	20.0%
!	AGCTAAAATTGATACAGAAA+AGG	+	chr8.2:31606431-31606450	None:intergenic	25.0%
!	ATGATACCATATGGAAAAAT+AGG	-	chr8.2:31606460-31606479	MS.gene066467:CDS	25.0%
!	CTTATTCTATGATCAAATGT+GGG	+	chr8.2:31606124-31606143	None:intergenic	25.0%
!	TCTTATTCTATGATCAAATG+TGG	+	chr8.2:31606125-31606144	None:intergenic	25.0%
!	TGTTAAGAATGAACAATATG+AGG	-	chr8.2:31605711-31605730	MS.gene066467:CDS	25.0%
!!	AAGAGTACATTATTAAGTGT+TGG	-	chr8.2:31606067-31606086	MS.gene066467:CDS	25.0%
!!	TTTAGTTTCAAAGCAAATGA+AGG	+	chr8.2:31605457-31605476	None:intergenic	25.0%
	AAAGACCTTGTTAGAGTTAA+AGG	-	chr8.2:31605556-31605575	MS.gene066467:CDS	30.0%
	AACACCACAAACACAAATAA+TGG	-	chr8.2:31605256-31605275	MS.gene066467:CDS	30.0%
	AAGATCAAAGATCACAATGA+TGG	-	chr8.2:31606141-31606160	MS.gene066467:CDS	30.0%
	AATAATGTACTCTTGATCTC+TGG	+	chr8.2:31606061-31606080	None:intergenic	30.0%
	AGATTTGAAGGCAAAGAATA+TGG	-	chr8.2:31606003-31606022	MS.gene066467:CDS	30.0%
	ATCTCCATTATTTGTGTTTG+TGG	+	chr8.2:31605263-31605282	None:intergenic	30.0%
	ATTAAGATTAAGATCACCTG+TGG	+	chr8.2:31605868-31605887	None:intergenic	30.0%
	GCAAAACAACAAAAAACGAA+TGG	-	chr8.2:31605510-31605529	MS.gene066467:CDS	30.0%
	GTTCATTCTTAACAGCAATA+TGG	+	chr8.2:31605705-31605724	None:intergenic	30.0%
	TCAAGAAAAATACACAGAGA+GGG	-	chr8.2:31605758-31605777	MS.gene066467:CDS	30.0%
	TGTAAAGGAGTTTCAACAAA+TGG	+	chr8.2:31605379-31605398	None:intergenic	30.0%
	TTAAGATTAAGATCACCTGT+GGG	+	chr8.2:31605867-31605886	None:intergenic	30.0%
!	TAGTGCTGAAATATGCAAAA+TGG	+	chr8.2:31605836-31605855	None:intergenic	30.0%
!	TTTTGCAAGTCAAATTAGTG+AGG	-	chr8.2:31605603-31605622	MS.gene066467:CDS	30.0%
!!	AGAAAGCCTATTTTTCCATA+TGG	+	chr8.2:31606469-31606488	None:intergenic	30.0%
!!	ATTTGACTTGCAAAATGAAG+AGG	+	chr8.2:31605598-31605617	None:intergenic	30.0%
	ACTAACCTGATAAATTCCAC+CGG	+	chr8.2:31606287-31606306	None:intergenic	35.0%
	ATGGATGCAGCAATATGTAA+AGG	+	chr8.2:31605394-31605413	None:intergenic	35.0%
	CAAGAAAAATACACAGAGAG+GGG	-	chr8.2:31605759-31605778	MS.gene066467:CDS	35.0%
	CATTACAAGAGACATATCAG+AGG	-	chr8.2:31606189-31606208	MS.gene066467:CDS	35.0%
	CTCAAGAAAAATACACAGAG+AGG	-	chr8.2:31605757-31605776	MS.gene066467:CDS	35.0%
	CTCTTCCTTTAACTCTAACA+AGG	+	chr8.2:31605564-31605583	None:intergenic	35.0%
	GGTAGAAATGGTAAAATTGG+AGG	+	chr8.2:31606338-31606357	None:intergenic	35.0%
	GTTAGAGTTAAAGGAAGAGA+AGG	-	chr8.2:31605565-31605584	MS.gene066467:CDS	35.0%
	TAATCAGTGACTTCTAAGCT+AGG	+	chr8.2:31606100-31606119	None:intergenic	35.0%
	TGGAAAAATAGGCTTTCTAG+TGG	-	chr8.2:31606471-31606490	MS.gene066467:CDS	35.0%
	TGGGGTAGAAATGGTAAAAT+TGG	+	chr8.2:31606341-31606360	None:intergenic	35.0%
	TTAAACAAAAGGGATAAGGC+AGG	-	chr8.2:31605805-31605824	MS.gene066467:intron	35.0%
	TTACATATTGCTGCATCCAT+GGG	-	chr8.2:31605394-31605413	MS.gene066467:CDS	35.0%
	TTTACATATTGCTGCATCCA+TGG	-	chr8.2:31605393-31605412	MS.gene066467:CDS	35.0%
!	AATTTTACCATTTCTACCCC+AGG	-	chr8.2:31606340-31606359	MS.gene066467:CDS	35.0%
!	ACTCAATGCTGATTGATAGA+TGG	+	chr8.2:31606260-31606279	None:intergenic	35.0%
!	CATTAATTTCTTGGTAGCAC+AGG	-	chr8.2:31605952-31605971	MS.gene066467:CDS	35.0%
!	GTCAAGTATTCAATGGATTC+CGG	+	chr8.2:31605661-31605680	None:intergenic	35.0%
!	TCAAGATGATCCATACGTTT+TGG	-	chr8.2:31605336-31605355	MS.gene066467:intron	35.0%
!	TTTCTAGTGGTTTCTCCAAT+GGG	-	chr8.2:31606484-31606503	MS.gene066467:CDS	35.0%
	AACATTTCCTGGGGTAGAAA+TGG	+	chr8.2:31606350-31606369	None:intergenic	40.0%
	ATTTCTACCCCAGGAAATGT+TGG	-	chr8.2:31606349-31606368	MS.gene066467:CDS	40.0%
	CATCTTGAATTACTGCGTAG+AGG	+	chr8.2:31605324-31605343	None:intergenic	40.0%
	CCATTGAATACTTGACTGTG+AGG	-	chr8.2:31605665-31605684	MS.gene066467:CDS	40.0%
	CCTCACAGTCAAGTATTCAA+TGG	+	chr8.2:31605668-31605687	None:intergenic	40.0%
	CTAACCTGATAAATTCCACC+GGG	+	chr8.2:31606286-31606305	None:intergenic	40.0%
	CTGATTTCCCAACATTTCCT+GGG	+	chr8.2:31606360-31606379	None:intergenic	40.0%
	TAACCTGATAAATTCCACCG+GGG	+	chr8.2:31606285-31606304	None:intergenic	40.0%
	TCTATACGCTCCAAAACGTA+TGG	+	chr8.2:31605349-31605368	None:intergenic	40.0%
	TGATTTCCCAACATTTCCTG+GGG	+	chr8.2:31606359-31606378	None:intergenic	40.0%
	TGTGTCTGCTATGTCTAATG+CGG	+	chr8.2:31606038-31606057	None:intergenic	40.0%
	TTTCTACCCCAGGAAATGTT+GGG	-	chr8.2:31606350-31606369	MS.gene066467:CDS	40.0%
!	ACTGATTTCCCAACATTTCC+TGG	+	chr8.2:31606361-31606380	None:intergenic	40.0%
!	CTCTTCAAGTACTTGTTAGC+TGG	-	chr8.2:31605734-31605753	MS.gene066467:CDS	40.0%
!	CTTTCTAGTGGTTTCTCCAA+TGG	-	chr8.2:31606483-31606502	MS.gene066467:CDS	40.0%
!	TTGGGAAATCAGTCTTGTCA+GGG	-	chr8.2:31606368-31606387	MS.gene066467:CDS	40.0%
!	TTTTGCATAGCGAGATGGAT+GGG	+	chr8.2:31605496-31605515	None:intergenic	40.0%
!!	GCTTTGAAACTAAATCCGCA+AGG	-	chr8.2:31605463-31605482	MS.gene066467:CDS	40.0%
!!!	TGTTGTTTTGCATAGCGAGA+TGG	+	chr8.2:31605501-31605520	None:intergenic	40.0%
	AACCTGATAAATTCCACCGG+GGG	+	chr8.2:31606284-31606303	None:intergenic	45.0%
	AGCACAGGCACTTCTATTGT+TGG	-	chr8.2:31605967-31605986	MS.gene066467:CDS	45.0%
	TAACTTTCTCCGTGTGTGTC+CGG	-	chr8.2:31605639-31605658	MS.gene066467:CDS	45.0%
	TAGTGGTTTCTCCAATGGGT+TGG	-	chr8.2:31606488-31606507	MS.gene066467:CDS	45.0%
	TTTGCATAGCGAGATGGATG+GGG	+	chr8.2:31605495-31605514	None:intergenic	45.0%
!	GTTGGGAAATCAGTCTTGTC+AGG	-	chr8.2:31606367-31606386	MS.gene066467:CDS	45.0%
!	GTTTTGCATAGCGAGATGGA+TGG	+	chr8.2:31605497-31605516	None:intergenic	45.0%
!!	GATCACAATGATGGATGCTC+TGG	-	chr8.2:31606150-31606169	MS.gene066467:CDS	45.0%
!!	AAAATAAAATATTAAACAAA+AGG	-	chr8.2:31605794-31605813	MS.gene066467:intron	5.0%
!!	AAATAAAATATTAAACAAAA+GGG	-	chr8.2:31605795-31605814	MS.gene066467:intron	5.0%
	ACCTGATAAATTCCACCGGG+GGG	+	chr8.2:31606283-31606302	None:intergenic	50.0%
	AGCACTAAGTAGTGACCCAC+AGG	-	chr8.2:31605849-31605868	MS.gene066467:intron	50.0%
	CAGAGGAGCAACGTAACACT+TGG	-	chr8.2:31606206-31606225	MS.gene066467:CDS	50.0%
	CTAGCGGTAAACCAACCCAT+TGG	+	chr8.2:31606502-31606521	None:intergenic	50.0%
	GGCAAAGTCCATATGACCCA+TGG	+	chr8.2:31605413-31605432	None:intergenic	50.0%
	TGCTGCATCCATGGGTCATA+TGG	-	chr8.2:31605402-31605421	MS.gene066467:CDS	50.0%
	TTGAAAGCTGCAGCTGAAGC+AGG	-	chr8.2:31605286-31605305	MS.gene066467:intron	50.0%
!	CAATGGATTCCGGACACACA+CGG	+	chr8.2:31605651-31605670	None:intergenic	50.0%
	ACAGAGAGGGGCTCAAAAGC+TGG	-	chr8.2:31605771-31605790	MS.gene066467:CDS	55.0%
	TCCCCCCGGTGGAATTTATC+AGG	-	chr8.2:31606279-31606298	MS.gene066467:CDS	55.0%
	TGGATGGGGCTGAATCCTTG+CGG	+	chr8.2:31605481-31605500	None:intergenic	55.0%
!	CAATCAGCATTGAGTCCCCC+CGG	-	chr8.2:31606265-31606284	MS.gene066467:CDS	55.0%
!	TCAGCATTGAGTCCCCCCGG+TGG	-	chr8.2:31606268-31606287	MS.gene066467:CDS	65.0%

Chromosome	Type	Strat	End	Strand	Name
chr8.2	gene	31605253	31606521	31605253	ID=MS.gene066467
chr8.2	mRNA	31605253	31606521	31605253	ID=MS.gene066467.t1;Parent=MS.gene066467
chr8.2	exon	31605904	31606521	31605904	ID=MS.gene066467.t1.exon1;Parent=MS.gene066467.t1
chr8.2	CDS	31605904	31606521	31605904	ID=cds.MS.gene066467.t1;Parent=MS.gene066467.t1
chr8.2	exon	31605385	31605800	31605385	ID=MS.gene066467.t1.exon2;Parent=MS.gene066467.t1
chr8.2	CDS	31605385	31605800	31605385	ID=cds.MS.gene066467.t1;Parent=MS.gene066467.t1
chr8.2	exon	31605253	31605292	31605253	ID=MS.gene066467.t1.exon3;Parent=MS.gene066467.t1
chr8.2	CDS	31605253	31605292	31605253	ID=cds.MS.gene066467.t1;Parent=MS.gene066467.t1

Gene Sequence

>MS.gene066467

ATGAACACCACAAACACAAATAATGGAGATCGATTGAAAGCTGCAGCTGAAGCAGGTGATATAGATCTCCTCTACGCAGTAATTCAAGATGATCCATACGTTTTGGAGCGTATAGATTCAATACCATTTGTTGAAACTCCTTTACATATTGCTGCATCCATGGGTCATATGGACTTTGCCATTGAAATTATGAATTTGAAACCTTCATTTGCTTTGAAACTAAATCCGCAAGGATTCAGCCCCATCCATCTCGCTATGCAAAACAACAAAAAACGAATGGTGTATCACTTTGTGAGCATCAATAAAGACCTTGTTAGAGTTAAAGGAAGAGAAGGCATAACTCCTCTTCATTTTGCAAGTCAAATTAGTGAGGTTAAAATGTTAGCTAACTTTCTCCGTGTGTGTCCGGAATCCATTGAATACTTGACTGTGAGGCGCGAGACTGCACTCCATATTGCTGTTAAGAATGAACAATATGAGGCTCTTCAAGTACTTGTTAGCTGGCTCAAGAAAAATACACAGAGAGGGGCTCAAAAGCTGGAAAATAAAATATTAAACAAAAGGGATAAGGCAGGCAACACCATTTTGCATATTTCAGCACTAAGTAGTGACCCACAGGTGATCTTAATCTTAATCTTATTTATTAACTTATAAGATATAAAATTGCTAACATGAATGATCTCTAACAATTGTATTATTCATTAATTTCTTGGTAGCACAGGCACTTCTATTGTTGGTAAATACTAGTATAGATTTGAAGGCAAAGAATATGGAGAACAAAACCGCATTAGACATAGCAGACACACCAGAGATCAAGAGTACATTATTAAGTGTTGGAGCAAAACCTAGCTTAGAAGTCACTGATTATCCCACATTTGATCATAGAATAAGATCAAAGATCACAATGATGGATGCTCTGGCAATTTATATATATCGCATTACAAGAGACATATCAGAGGAGCAACGTAACACTTGGTTGATAGTTGCGACTCTTGTTGCAACTGCCATCTATCAATCAGCATTGAGTCCCCCCGGTGGAATTTATCAGGTTAGTGCTAGTGATACTAACGTGAACATCACTTCCTCCAATTTTACCATTTCTACCCCAGGAAATGTTGGGAAATCAGTCTTGTCAGGGTATGAATTCTTTTTGTTTTTATTTGTTAATATGTATTCCTTTTCTGTATCAATTTTAGCTATATTTTTTATGATACCATATGGAAAAATAGGCTTTCTAGTGGTTTCTCCAATGGGTTGGTTTACCGCTAG

Protein sequence

>MS.gene066467.t1

MNTTNTNNGDRLKAAAEAGDIDLLYAVIQDDPYVLERIDSIPFVETPLHIAASMGHMDFAIEIMNLKPSFALKLNPQGFSPIHLAMQNNKKRMVYHFVSINKDLVRVKGREGITPLHFASQISEVKMLANFLRVCPESIEYLTVRRETALHIAVKNEQYEALQVLVSWLKKNTQRGAQKLENKILNKRDKAGNTILHISALSSDPQALLLLVNTSIDLKAKNMENKTALDIADTPEIKSTLLSVGAKPSLEVTDYPTFDHRIRSKITMMDALAIYIYRITRDISEEQRNTWLIVATLVATAIYQSALSPPGGIYQVSASDTNVNITSSNFTISTPGNVGKSVLSGLSSGFSNGLVYR