AlfalfaGEDB | MS.gene32723

M. sativa cultivar XinJiangDaYe / MS.gene32723

KEGG: -
GO: GO:0003674 GO:0005488 GO:0005515
PFAM: PF12796.10 PF13637.9 PF13857.9

Nr:

Query id	Subject id	identity %	alignment length	mismatches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
MS.gene32723.t1	XP_003603259.1	96.7	306	10	0	1	306	11	316	8.90E-108	400.2

Swissprot:

Query id	Subject id	identity %	alignment length	mismatches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
MS.gene32723.t1	Q8GYH5	53.1	294	133	4	2	293	12	302	2.7e-20	100.9

Trembl:

Query id	Subject id	identity %	alignment length	mismatches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
MS.gene32723.t1	G7J969	96.7	306	10	0	1	306	11	316	6.5e-108	400.2

TFs/TRs:

Gene ID	Type	Classification

Protein Kinases:

Gene ID	Type	Classification

Network:

Co-expression Network:

Gene1	Gene2	correlation coefficient	p_value	FDR

PPI:

Gene1	Gene2	Type
MS.gene69687	MS.gene32723	PPI
MS.gene035805	MS.gene32723	PPI
MS.gene066500	MS.gene32723	PPI
MS.gene51258	MS.gene32723	PPI
MS.gene23810	MS.gene32723	PPI
MS.gene024753	MS.gene32723	PPI
MS.gene78281	MS.gene32723	PPI
MS.gene037950	MS.gene32723	PPI
MS.gene70008	MS.gene32723	PPI
MS.gene69966	MS.gene32723	PPI
MS.gene24806	MS.gene32723	PPI
MS.gene071113	MS.gene32723	PPI
MS.gene004844	MS.gene32723	PPI
MS.gene027071	MS.gene32723	PPI
MS.gene32723	MS.gene053363	PPI
MS.gene30433	MS.gene32723	PPI
MS.gene007487	MS.gene32723	PPI
MS.gene007485	MS.gene32723	PPI
MS.gene018518	MS.gene32723	PPI
MS.gene90400	MS.gene32723	PPI
MS.gene037184	MS.gene32723	PPI
MS.gene066464	MS.gene32723	PPI
MS.gene32723	MS.gene32726	PPI
MS.gene32723	MS.gene71122	PPI
MS.gene067705	MS.gene32723	PPI
MS.gene07706	MS.gene32723	PPI
MS.gene027074	MS.gene32723	PPI
MS.gene51262	MS.gene32723	PPI
MS.gene32723	MS.gene92243	PPI
MS.gene050270	MS.gene32723	PPI
MS.gene02469	MS.gene32723	PPI
MS.gene008833	MS.gene32723	PPI
MS.gene24922	MS.gene32723	PPI
MS.gene010912	MS.gene32723	PPI
MS.gene32723	MS.gene23881	PPI
MS.gene050457	MS.gene32723	PPI
MS.gene87218	MS.gene32723	PPI
MS.gene25024	MS.gene32723	PPI
MS.gene23811	MS.gene32723	PPI
MS.gene34712	MS.gene32723	PPI
MS.gene51335	MS.gene32723	PPI
MS.gene065848	MS.gene32723	PPI
MS.gene005995	MS.gene32723	PPI
MS.gene027441	MS.gene32723	PPI
MS.gene068249	MS.gene32723	PPI
MS.gene066046	MS.gene32723	PPI
MS.gene051003	MS.gene32723	PPI
MS.gene64441	MS.gene32723	PPI
MS.gene30176	MS.gene32723	PPI
MS.gene27223	MS.gene32723	PPI
MS.gene32723	MS.gene65775	PPI
MS.gene038519	MS.gene32723	PPI
MS.gene32723	MS.gene80163	PPI
MS.gene050272	MS.gene32723	PPI
MS.gene81055	MS.gene32723	PPI
MS.gene22482	MS.gene32723	PPI
MS.gene043662	MS.gene32723	PPI
MS.gene32723	MS.gene51278	PPI
MS.gene26021	MS.gene32723	PPI
MS.gene32723	MS.gene87218	PPI
MS.gene039682	MS.gene32723	PPI
MS.gene043742	MS.gene32723	PPI
MS.gene061932	MS.gene32723	PPI
MS.gene48655	MS.gene32723	PPI
MS.gene85534	MS.gene32723	PPI
MS.gene30174	MS.gene32723	PPI
MS.gene027073	MS.gene32723	PPI
MS.gene26532	MS.gene32723	PPI
MS.gene064542	MS.gene32723	PPI
MS.gene066467	MS.gene32723	PPI
MS.gene47479	MS.gene32723	PPI
MS.gene21734	MS.gene32723	PPI
MS.gene33377	MS.gene32723	PPI
MS.gene008767	MS.gene32723	PPI
MS.gene23196	MS.gene32723	PPI
MS.gene71204	MS.gene32723	PPI
MS.gene007486	MS.gene32723	PPI
MS.gene80163	MS.gene32723	PPI
MS.gene39623	MS.gene32723	PPI
MS.gene71122	MS.gene32723	PPI
MS.gene32723	MS.gene008833	PPI
MS.gene26672	MS.gene32723	PPI
MS.gene36842	MS.gene32723	PPI
MS.gene99554	MS.gene32723	PPI
MS.gene050456	MS.gene32723	PPI
MS.gene058128	MS.gene32723	PPI
MS.gene99588	MS.gene32723	PPI
MS.gene027075	MS.gene32723	PPI
MS.gene41291	MS.gene32723	PPI
MS.gene32723	MS.gene48655	PPI
MS.gene066501	MS.gene32723	PPI
MS.gene08470	MS.gene32723	PPI
MS.gene63085	MS.gene32723	PPI
MS.gene056455	MS.gene32723	PPI
MS.gene89986	MS.gene32723	PPI
MS.gene32723	MS.gene027072	PPI
MS.gene23881	MS.gene32723	PPI
MS.gene052956	MS.gene32723	PPI
MS.gene91775	MS.gene32723	PPI
MS.gene34009	MS.gene32723	PPI
MS.gene30177	MS.gene32723	PPI
MS.gene69965	MS.gene32723	PPI
MS.gene65463	MS.gene32723	PPI
MS.gene21888	MS.gene32723	PPI
MS.gene32723	MS.gene067705	PPI
MS.gene82740	MS.gene32723	PPI
MS.gene042783	MS.gene32723	PPI
MS.gene09785	MS.gene32723	PPI
MS.gene54764	MS.gene32723	PPI
MS.gene32723	MS.gene99973	PPI
MS.gene30172	MS.gene32723	PPI
MS.gene045937	MS.gene32723	PPI
MS.gene041770	MS.gene32723	PPI
MS.gene51278	MS.gene32723	PPI
MS.gene23852	MS.gene32723	PPI
MS.gene97943	MS.gene32723	PPI
MS.gene97379	MS.gene32723	PPI
MS.gene67157	MS.gene32723	PPI
MS.gene99973	MS.gene32723	PPI
MS.gene65775	MS.gene32723	PPI
MS.gene012203	MS.gene32723	PPI
MS.gene022109	MS.gene32723	PPI
MS.gene34651	MS.gene32723	PPI
MS.gene25244	MS.gene32723	PPI
MS.gene014931	MS.gene32723	PPI
MS.gene010910	MS.gene32723	PPI
MS.gene32726	MS.gene32723	PPI
MS.gene025229	MS.gene32723	PPI
MS.gene063222	MS.gene32723	PPI
MS.gene25515	MS.gene32723	PPI
MS.gene26019	MS.gene32723	PPI
MS.gene32723	MS.gene60920	PPI
MS.gene062662	MS.gene32723	PPI
MS.gene73119	MS.gene32723	PPI

Query id	Subject id	identity %	alignment length	mismatches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
MS.gene32723.t1	MTR_3g105650	95.425	306	14	0	1	306	11	316	0.0	608
MS.gene32723.t1	MTR_8g073260	55.482	301	126	2	2	301	18	311	3.40e-114	338
MS.gene32723.t1	MTR_1g059930	52.492	301	135	2	2	301	19	312	6.55e-105	313
MS.gene32723.t1	MTR_8g039620	51.316	304	137	2	2	301	21	317	8.99e-104	311
MS.gene32723.t1	MTR_8g072510	50.166	301	142	2	2	301	17	310	4.70e-99	299
MS.gene32723.t1	MTR_3g016210	48.397	312	142	3	2	301	17	321	5.77e-98	296
MS.gene32723.t1	MTR_7g451420	50.000	302	141	3	2	301	16	309	2.52e-97	290
MS.gene32723.t1	MTR_7g021090	48.667	300	142	3	2	301	16	303	5.34e-93	282
MS.gene32723.t1	MTR_8g467780	47.267	311	146	4	2	301	18	321	2.34e-89	275
MS.gene32723.t1	MTR_8g062410	50.498	301	135	4	2	301	17	304	1.89e-87	270
MS.gene32723.t1	MTR_8g069880	46.535	303	150	4	2	301	14	307	3.90e-87	269
MS.gene32723.t1	MTR_8g068990	48.197	305	131	6	2	301	19	301	1.03e-86	268
MS.gene32723.t1	MTR_8g040930	49.442	269	123	4	38	301	2	262	5.30e-80	248
MS.gene32723.t1	MTR_8g041240	49.442	269	123	4	38	301	2	262	5.30e-80	248
MS.gene32723.t1	MTR_8g066670	45.183	301	157	2	2	301	1082	1375	1.74e-76	255
MS.gene32723.t1	MTR_8g073275	41.768	328	110	8	38	301	2	312	3.25e-64	209
MS.gene32723.t1	MTR_1g115575	28.028	289	179	4	30	301	169	445	3.71e-25	105
MS.gene32723.t1	MTR_8g105260	29.010	293	171	8	30	300	101	378	1.87e-24	103
MS.gene32723.t1	MTR_1g032100	27.397	292	177	6	30	300	94	371	8.43e-23	99.0
MS.gene32723.t1	MTR_2g101320	27.907	215	144	2	23	236	134	338	2.34e-20	92.0
MS.gene32723.t1	MTR_2g096190	24.503	302	187	7	31	310	105	387	4.08e-20	91.3
MS.gene32723.t1	MTR_7g117620	26.846	298	179	7	30	307	119	397	1.65e-19	89.4
MS.gene32723.t1	MTR_7g100430	27.215	316	186	9	28	301	124	437	5.65e-19	87.8
MS.gene32723.t1	MTR_7g099580	31.148	183	113	4	4	181	21	195	3.61e-18	84.3
MS.gene32723.t1	MTR_4g062100	23.810	336	206	8	2	311	81	392	5.77e-18	84.7
MS.gene32723.t1	MTR_1g069110	23.292	322	182	4	2	301	25	303	1.11e-17	83.6
MS.gene32723.t1	MTR_2g101310	26.415	212	145	2	26	236	137	338	6.92e-17	81.3
MS.gene32723.t1	MTR_2g101310	26.636	214	142	3	26	236	137	338	9.28e-17	81.3
MS.gene32723.t1	MTR_7g099570	28.877	187	119	3	2	183	16	193	1.73e-15	77.4
MS.gene32723.t1	MTR_5g085830	24.771	218	154	5	29	244	277	486	5.14e-13	70.1
MS.gene32723.t1	MTR_7g100390	23.438	320	207	7	2	300	60	362	1.47e-12	68.6
MS.gene32723.t1	MTR_5g085810	27.228	202	133	5	46	240	320	514	1.10e-11	65.9

Query id	Subject id	identity %	alignment length	mismatches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
MS.gene32723.t1	AT4G10720	44.554	303	166	2	1	301	11	313	1.53e-83	258
MS.gene32723.t1	AT4G10720	44.554	303	166	2	1	301	11	313	4.38e-83	258
MS.gene32723.t1	AT1G14500	39.869	306	175	4	2	301	12	314	7.04e-70	224
MS.gene32723.t1	AT5G15500	40.523	306	172	4	2	301	13	314	1.04e-69	224
MS.gene32723.t1	AT5G54620	39.799	299	177	3	2	298	12	309	5.52e-68	219
MS.gene32723.t1	AT5G54610	39.189	296	175	4	2	295	12	304	4.26e-66	214
MS.gene32723.t1	AT1G14480	38.235	306	181	4	2	301	12	315	2.37e-64	209
MS.gene32723.t1	AT1G14480	33.550	307	151	5	2	301	12	272	4.73e-46	160
MS.gene32723.t1	AT5G51160	31.636	275	162	5	43	301	31	295	1.51e-32	125
MS.gene32723.t1	AT2G01680	27.931	290	178	4	30	300	97	374	2.74e-29	117
MS.gene32723.t1	AT5G15500	34.434	212	129	4	96	301	1	208	9.89e-29	113
MS.gene32723.t1	AT3G09550	27.245	323	193	7	2	301	154	457	1.76e-23	101
MS.gene32723.t1	AT3G09550	27.245	323	193	7	2	301	154	457	1.76e-23	101
MS.gene32723.t1	AT3G09550	27.245	323	193	7	2	301	161	464	1.80e-23	101
MS.gene32723.t1	AT3G12360	27.740	292	176	6	30	301	155	431	5.93e-20	90.9
MS.gene32723.t1	AT3G12360	27.740	292	176	6	30	301	167	443	6.49e-20	90.5
MS.gene32723.t1	AT4G03460	31.760	233	132	9	73	301	277	486	7.23e-20	90.5
MS.gene32723.t1	AT4G03460	31.760	233	132	9	73	301	245	454	7.25e-20	90.5
MS.gene32723.t1	AT4G03500	26.452	310	167	10	29	301	217	502	1.19e-19	90.1
MS.gene32723.t1	AT4G03500	26.452	310	167	10	29	301	194	479	1.71e-19	89.4
MS.gene32723.t1	AT4G03500	26.452	310	167	10	29	301	194	479	1.71e-19	89.4
MS.gene32723.t1	AT5G02620	25.424	295	179	5	31	300	95	373	3.15e-18	85.5
MS.gene32723.t1	AT5G02620	25.424	295	179	5	31	300	95	373	3.15e-18	85.5
MS.gene32723.t1	AT5G02620	25.424	295	179	5	31	300	95	373	3.15e-18	85.5
MS.gene32723.t1	AT1G07710	25.680	331	205	9	2	311	77	387	1.97e-16	80.1
MS.gene32723.t1	AT1G07710	25.680	331	205	9	2	311	77	387	1.97e-16	80.1
MS.gene32723.t1	AT2G31820	24.399	291	184	5	30	300	227	501	4.76e-16	79.3
MS.gene32723.t1	AT1G03670	27.966	236	138	6	87	317	279	487	1.53e-15	77.8
MS.gene32723.t1	AT5G02620	24.465	327	180	6	31	309	95	402	1.93e-15	77.4
MS.gene32723.t1	AT5G02620	24.465	327	180	6	31	309	95	402	1.93e-15	77.4
MS.gene32723.t1	AT1G05640	23.056	360	182	10	28	300	114	465	6.69e-15	75.9
MS.gene32723.t1	AT1G34050	23.443	273	185	7	39	301	162	420	2.67e-14	73.9
MS.gene32723.t1	AT4G03480	26.354	277	180	7	31	301	360	618	2.79e-14	73.9
MS.gene32723.t1	AT4G03480	26.354	277	180	7	31	301	357	615	2.89e-14	73.9
MS.gene32723.t1	AT5G60070	24.923	325	200	9	2	300	84	390	3.45e-14	73.6
MS.gene32723.t1	AT4G14390	23.247	271	184	5	32	301	276	523	4.29e-12	67.4
MS.gene32723.t1	AT4G14390	23.443	273	181	6	32	301	295	542	4.84e-12	67.0
MS.gene32723.t1	AT1G10340	23.529	306	187	8	31	301	136	429	1.88e-11	65.1
MS.gene32723.t1	AT4G03450	25.725	276	182	8	31	301	227	484	2.17e-11	65.1
MS.gene32723.t1	AT4G03450	25.725	276	182	8	31	301	227	484	2.89e-11	64.7
MS.gene32723.t1	AT4G14390	23.636	275	174	7	38	301	294	543	3.11e-11	64.7
MS.gene32723.t1	AT4G14390	23.247	271	180	6	32	299	276	521	6.60e-11	63.5

Find 49 sgRNAs with CRISPR-Local

Find 124 sgRNAs with CRISPR-GE

CRISPR-Local

CRISPR-Local
sgRNA_sequence	on_target_score	Position	Region
TTGCATATTGCTGCAGCTTC+TGG	0.104530	3.1:-83369277	MS.gene32723:CDS
TGTTTGTTCATCTAAATTCT+TGG	0.276195	3.1:+83367891	None:intergenic
TGCATATTGCTGCAGCTTCT+GGG	0.291052	3.1:-83369276	MS.gene32723:CDS
TGACGAGTTGACAAAGTCTT+TGG	0.298790	3.1:+83367184	None:intergenic
GCTTGGAAACTAAACGAGTA+TGG	0.326774	3.1:-83369208	MS.gene32723:CDS
GACTAAAACCTTCATTTGCT+TGG	0.341585	3.1:-83369225	MS.gene32723:CDS
TTGCACATTGCTACGCAAAC+TGG	0.361427	3.1:-83369073	MS.gene32723:CDS
TTCTTGAGATCTTGCTTGGT+TGG	0.367274	3.1:-83368937	MS.gene32723:CDS
GATGTTCTTGAGATCTTGCT+TGG	0.381604	3.1:-83368941	MS.gene32723:CDS
GACCCTCTCTCCCTTTGATT+CGG	0.391340	3.1:+83369104	None:intergenic
TCTTGTAGTTAAATTCTTGT+CGG	0.420938	3.1:-83369041	MS.gene32723:CDS
TGATTTCTGCACTATAAACT+TGG	0.455664	3.1:+83367839	None:intergenic
GCTATACAAACTGATTCAAA+TGG	0.456485	3.1:-83369350	MS.gene32723:CDS
AAAGACCTTGTCCGAATCAA+AGG	0.465762	3.1:-83369115	MS.gene32723:CDS
TTATAGCGTTCTAAGATGTA+TGG	0.468594	3.1:+83369325	None:intergenic
TTTAGTTTCCAAGCAAATGA+AGG	0.469820	3.1:+83369217	None:intergenic
TCTTGCTTGGTTGGCTTCGA+AGG	0.470106	3.1:-83368928	MS.gene32723:CDS
AAATTCTTGTCGGTTTGTCC+AGG	0.494151	3.1:-83369031	MS.gene32723:CDS
TGTCATATTGTGCAGGCAGT+TGG	0.496735	3.1:-83367946	MS.gene32723:intron
CTCTCCCTTTGATTCGGACA+AGG	0.497968	3.1:+83369110	None:intergenic
GATCGTAGCTCTTCGTGAAG+TGG	0.498077	3.1:+83367763	None:intergenic
TGCAAAGGAGTATCAACAAA+TGG	0.503702	3.1:+83369295	None:intergenic
AGTTTATAGTGCAGAAATCA+AGG	0.506788	3.1:-83367836	MS.gene32723:CDS
TTTAGATGAACAAACAGCAT+TGG	0.510720	3.1:-83367884	MS.gene32723:CDS
AGCTGGTGGAGGAAAATTAG+TGG	0.517201	3.1:-83367602	MS.gene32723:intron
CTGAATTGGGAGGATGAAGC+AGG	0.520550	3.1:-83368866	MS.gene32723:CDS
TCTTAAACGAGTAACACAAA+TGG	0.523638	3.1:+83367714	None:intergenic
AAGGACATGTTGATTAAAGC+AGG	0.524636	3.1:-83367817	MS.gene32723:CDS
ATTAAAGCAGGAGCTTTACA+TGG	0.524711	3.1:-83367805	MS.gene32723:CDS
AGTTGACAAAGTCTTTGGCT+TGG	0.526674	3.1:+83367189	None:intergenic
ACAAAACAAATATTACAGAA+TGG	0.533575	3.1:-83369161	MS.gene32723:CDS
AAGACCTTGTCCGAATCAAA+GGG	0.554193	3.1:-83369114	MS.gene32723:CDS
TATTGAGAAGTGACATGTGC+AGG	0.574312	3.1:+83368834	None:intergenic
CTTAACCCTCCAGCTGGTGG+AGG	0.584385	3.1:-83367613	MS.gene32723:CDS
CCTTGTGATGAGAACGTCTG+TGG	0.589242	3.1:+83368900	None:intergenic
CCACAGACGTTCTCATCACA+AGG	0.592862	3.1:-83368900	MS.gene32723:CDS
AGCTCTTCGTGAAGTGGAGT+AGG	0.598129	3.1:+83367769	None:intergenic
ACAAACAGCATTGGACATAG+TGG	0.603971	3.1:-83367875	MS.gene32723:CDS
GTCCGAATCAAAGGGAGAGA+GGG	0.604625	3.1:-83369106	MS.gene32723:CDS
ACACTTAACCCTCCAGCTGG+TGG	0.610202	3.1:-83367616	MS.gene32723:CDS
GAAGCTGCAGCAATATGCAA+AGG	0.614052	3.1:+83369280	None:intergenic
TGTCCGAATCAAAGGGAGAG+AGG	0.614649	3.1:-83369107	MS.gene32723:CDS
ACTTCTCAATAGCTTCCCAC+AGG	0.615391	3.1:-83368822	MS.gene32723:intron
GTGACATCTTCAATACAACC+TGG	0.619746	3.1:+83369013	None:intergenic
GCAACACTTAACCCTCCAGC+TGG	0.624740	3.1:-83367619	MS.gene32723:CDS
GTTTGCGTAGCAATGTGCAA+AGG	0.652449	3.1:+83369076	None:intergenic
GAGAAGTGACATGTGCAGGA+TGG	0.692918	3.1:+83368838	None:intergenic
AAAACGGGTTCTGAATTGGG+AGG	0.707905	3.1:-83368876	MS.gene32723:CDS
GGTCTTTATTAATGTCTACG+AGG	0.768754	3.1:+83369131	None:intergenic

CRISPR-GE

badsite warning	sgRNA_sequence	Strand	Position	Region	GC_content
!!!	AAAATATTAGTTTTAAATTG+AGG	+	chr3.1:83368316-83368335	None:intergenic	10.0%
!!	CTTATTTATAAGAGATATTT+AGG	+	chr3.1:83368429-83368448	None:intergenic	15.0%
!!	TATATTAATTAATTCAGCTA+TGG	-	chr3.1:83368498-83368517	MS.gene32723:intron	15.0%
!!!	GTTTGTTATAATTTTTAAAG+TGG	-	chr3.1:83368245-83368264	MS.gene32723:intron	15.0%
!!!	TATTTACTCATGTTTTTAAA+AGG	-	chr3.1:83368103-83368122	MS.gene32723:intron	15.0%
!!!	TTTAAAACTAATATTTTCTC+TGG	-	chr3.1:83368319-83368338	MS.gene32723:intron	15.0%
!!!	TTTTGATTTGACAATTAAAT+TGG	-	chr3.1:83368211-83368230	MS.gene32723:intron	15.0%
!!	ACAAAACAAATATTACAGAA+TGG	-	chr3.1:83367382-83367401	MS.gene32723:intron	20.0%
!!	AGTAGAAAGAAAAGAAATAT+AGG	+	chr3.1:83367760-83367779	None:intergenic	20.0%
!!	GTAGAAAGAAAAGAAATATA+GGG	+	chr3.1:83367759-83367778	None:intergenic	20.0%
!!!	AATATTTGTTTTGTAAAGCA+AGG	+	chr3.1:83367376-83367395	None:intergenic	20.0%
!!!	ATATGCCTTTAAAATACTTA+GGG	-	chr3.1:83367827-83367846	MS.gene32723:CDS	20.0%
!!!	CTTGTTTTTCTTTTGTATTA+CGG	-	chr3.1:83367887-83367906	MS.gene32723:CDS	20.0%
!!!	TATATGCCTTTAAAATACTT+AGG	-	chr3.1:83367826-83367845	MS.gene32723:CDS	20.0%
!	AAACTAAATTAACTCAGCTA+TGG	-	chr3.1:83368571-83368590	MS.gene32723:intron	25.0%
!	CACATAAATATCTACAAATG+TGG	-	chr3.1:83367784-83367803	MS.gene32723:CDS	25.0%
!	TCTTGTAGTTAAATTCTTGT+CGG	-	chr3.1:83367502-83367521	MS.gene32723:intron	25.0%
!	TGTTTGTTCATCTAAATTCT+TGG	+	chr3.1:83368655-83368674	None:intergenic	25.0%
!	TTGTTTGATCTTCAATGTTA+TGG	+	chr3.1:83368067-83368086	None:intergenic	25.0%
!!!	AAGTACCCTAAGTATTTTAA+AGG	+	chr3.1:83367835-83367854	None:intergenic	25.0%
	AACTAAGGGTCTCTTTATAA+GGG	+	chr3.1:83368025-83368044	None:intergenic	30.0%
	ACAATTCCAAATGTATAGCT+TGG	+	chr3.1:83369140-83369159	None:intergenic	30.0%
	AGTTTATAGTGCAGAAATCA+AGG	-	chr3.1:83368707-83368726	MS.gene32723:intron	30.0%
	ATACATTACATTAGCCCAAA+AGG	-	chr3.1:83369214-83369233	MS.gene32723:CDS	30.0%
	ATGTGTTTATTAATGCCAAG+AGG	-	chr3.1:83369038-83369057	MS.gene32723:CDS	30.0%
	GAAGGAAACAAATGGTAAAT+TGG	-	chr3.1:83369281-83369300	MS.gene32723:CDS	30.0%
	TCTTAAACGAGTAACACAAA+TGG	+	chr3.1:83368832-83368851	None:intergenic	30.0%
	TGATTTCTGCACTATAAACT+TGG	+	chr3.1:83368707-83368726	None:intergenic	30.0%
	TTTAGATGAACAAACAGCAT+TGG	-	chr3.1:83368659-83368678	MS.gene32723:intron	30.0%
!	AGTTTTCAGAAGGAAACAAA+TGG	-	chr3.1:83369273-83369292	MS.gene32723:CDS	30.0%
!	GCTATACAAACTGATTCAAA+TGG	-	chr3.1:83367193-83367212	MS.gene32723:CDS	30.0%
!	TTTAGTTTCCAAGCAAATGA+AGG	+	chr3.1:83367329-83367348	None:intergenic	30.0%
!	TTTGTTTCCTTCTGAAAACT+TGG	+	chr3.1:83369273-83369292	None:intergenic	30.0%
!	TTTTAGTCTCATAATCTCAG+TGG	+	chr3.1:83367306-83367325	None:intergenic	30.0%
!	TTTTGTAAAGCAAGGTGTAT+GGG	+	chr3.1:83367368-83367387	None:intergenic	30.0%
!!	TCAATCAAACTACTAGTCTT+TGG	+	chr3.1:83368453-83368472	None:intergenic	30.0%
!!	TTATAGCGTTCTAAGATGTA+TGG	+	chr3.1:83367221-83367240	None:intergenic	30.0%
!!!	GGTACTTTTTTGAAGAGTTT+TGG	-	chr3.1:83367848-83367867	MS.gene32723:CDS	30.0%
!!!	TTTTTTGAAGAGTTTTGGAG+AGG	-	chr3.1:83367853-83367872	MS.gene32723:CDS	30.0%
	AAAATGCGAACGTACTTCTT+AGG	-	chr3.1:83368969-83368988	MS.gene32723:CDS	35.0%
	AAATGCGAACGTACTTCTTA+GGG	-	chr3.1:83368970-83368989	MS.gene32723:CDS	35.0%
	ACTAAGGGTCTCTTTATAAG+GGG	+	chr3.1:83368024-83368043	None:intergenic	35.0%
	ACTCAATTTACGTTCTTGTC+TGG	-	chr3.1:83369310-83369329	MS.gene32723:CDS	35.0%
	ATAACACTTATACGTCCTCT+TGG	+	chr3.1:83369056-83369075	None:intergenic	35.0%
	ATAGCACCAAGCTATACATT+TGG	-	chr3.1:83369131-83369150	MS.gene32723:CDS	35.0%
	ATTAAAGCAGGAGCTTTACA+TGG	-	chr3.1:83368738-83368757	MS.gene32723:intron	35.0%
	CAACTAAGGGTCTCTTTATA+AGG	+	chr3.1:83368026-83368045	None:intergenic	35.0%
	GACTAAAACCTTCATTTGCT+TGG	-	chr3.1:83367318-83367337	MS.gene32723:intron	35.0%
	GGTCTTTATTAATGTCTACG+AGG	+	chr3.1:83367415-83367434	None:intergenic	35.0%
	GTTCTCATCACAAGGAAAAA+CGG	-	chr3.1:83367651-83367670	MS.gene32723:CDS	35.0%
	TAAAGAGACCCTTAGTTGTT+TGG	-	chr3.1:83368028-83368047	MS.gene32723:intron	35.0%
	TTCTCATCACAAGGAAAAAC+GGG	-	chr3.1:83367652-83367671	MS.gene32723:CDS	35.0%
!	AAGGACATGTTGATTAAAGC+AGG	-	chr3.1:83368726-83368745	MS.gene32723:intron	35.0%
!	ACCATACATTCGAACCTTTT+GGG	+	chr3.1:83369231-83369250	None:intergenic	35.0%
!	ACTTGTGGCAGTGTATTTTT+GGG	-	chr3.1:83369181-83369200	MS.gene32723:CDS	35.0%
!	GATGTATCCAAGTTTTCAGA+AGG	-	chr3.1:83369263-83369282	MS.gene32723:CDS	35.0%
!	GTTTTGTAAAGCAAGGTGTA+TGG	+	chr3.1:83367369-83367388	None:intergenic	35.0%
!	TACATTTGGAATTGTCACTG+TGG	-	chr3.1:83369145-83369164	MS.gene32723:CDS	35.0%
!	TACTTGTGGCAGTGTATTTT+TGG	-	chr3.1:83369180-83369199	MS.gene32723:CDS	35.0%
!!	TGCAAAGGAGTATCAACAAA+TGG	+	chr3.1:83367251-83367270	None:intergenic	35.0%
	AAAGACCTTGTCCGAATCAA+AGG	-	chr3.1:83367428-83367447	MS.gene32723:intron	40.0%
	AAGACCTTGTCCGAATCAAA+GGG	-	chr3.1:83367429-83367448	MS.gene32723:intron	40.0%
	AGTTGACAAAGTCTTTGGCT+TGG	+	chr3.1:83369357-83369376	None:intergenic	40.0%
	ATCTCGAGACCAAACAACTA+AGG	+	chr3.1:83368040-83368059	None:intergenic	40.0%
	ATGGTCATGTCATATTGTGC+AGG	-	chr3.1:83368590-83368609	MS.gene32723:intron	40.0%
	CAACCACAGAATAAAGCAAG+TGG	+	chr3.1:83369089-83369108	None:intergenic	40.0%
	CTAAGGGTCTCTTTATAAGG+GGG	+	chr3.1:83368023-83368042	None:intergenic	40.0%
	GATGTTCTTGAGATCTTGCT+TGG	-	chr3.1:83367602-83367621	MS.gene32723:intron	40.0%
	GCTTGGAAACTAAACGAGTA+TGG	-	chr3.1:83367335-83367354	MS.gene32723:intron	40.0%
	GGCTATTCCATGTATACTTG+TGG	-	chr3.1:83369166-83369185	MS.gene32723:CDS	40.0%
	GGTTGTCTTATGGTTAGGAA+AGG	-	chr3.1:83369331-83369350	MS.gene32723:CDS	40.0%
	GTGACATCTTCAATACAACC+TGG	+	chr3.1:83367533-83367552	None:intergenic	40.0%
	GTTCTTGTCTGGTTGTCTTA+TGG	-	chr3.1:83369321-83369340	MS.gene32723:CDS	40.0%
	TAAGGGTCTCTTTATAAGGG+GGG	+	chr3.1:83368022-83368041	None:intergenic	40.0%
	TACACTGCCACAAGTATACA+TGG	+	chr3.1:83369176-83369195	None:intergenic	40.0%
	TATTGAGAAGTGACATGTGC+AGG	+	chr3.1:83367712-83367731	None:intergenic	40.0%
	TCGAATGTATGGTCGTGAAT+GGG	-	chr3.1:83369238-83369257	MS.gene32723:CDS	40.0%
	TCTCGAGACCAAACAACTAA+GGG	+	chr3.1:83368039-83368058	None:intergenic	40.0%
	TGTCTGGTTGTCTTATGGTT+AGG	-	chr3.1:83369326-83369345	MS.gene32723:CDS	40.0%
	TTCGAATGTATGGTCGTGAA+TGG	-	chr3.1:83369237-83369256	MS.gene32723:CDS	40.0%
	TTCTTGAGATCTTGCTTGGT+TGG	-	chr3.1:83367606-83367625	MS.gene32723:CDS	40.0%
!	ACAAACAGCATTGGACATAG+TGG	-	chr3.1:83368668-83368687	MS.gene32723:intron	40.0%
!	GAACGTACTTCTTAGGGTTT+TGG	-	chr3.1:83368976-83368995	MS.gene32723:CDS	40.0%
!	GACCATACATTCGAACCTTT+TGG	+	chr3.1:83369232-83369251	None:intergenic	40.0%
!	TGACGAGTTGACAAAGTCTT+TGG	+	chr3.1:83369362-83369381	None:intergenic	40.0%
!	TGTCCACTTGCTTTATTCTG+TGG	-	chr3.1:83369083-83369102	MS.gene32723:CDS	40.0%
!!	AAATTCTTGTCGGTTTGTCC+AGG	-	chr3.1:83367512-83367531	MS.gene32723:intron	40.0%
!!	AGGAAAAACGGGTTCTGAAT+TGG	-	chr3.1:83367663-83367682	MS.gene32723:CDS	40.0%
!!	CTTGTGGCAGTGTATTTTTG+GGG	-	chr3.1:83369182-83369201	MS.gene32723:CDS	40.0%
!!	GGAAAAACGGGTTCTGAATT+GGG	-	chr3.1:83367664-83367683	MS.gene32723:CDS	40.0%
!!!	TTTGAAGAGTTTTGGAGAGG+AGG	-	chr3.1:83367856-83367875	MS.gene32723:CDS	40.0%
	ACTTCTCAATAGCTTCCCAC+AGG	-	chr3.1:83367721-83367740	MS.gene32723:CDS	45.0%
	AGCTGGTGGAGGAAAATTAG+TGG	-	chr3.1:83368941-83368960	MS.gene32723:CDS	45.0%
	CTTTATAAGGGGGGTCTGAA+GGG	+	chr3.1:83368013-83368032	None:intergenic	45.0%
	GAAGCTGCAGCAATATGCAA+AGG	+	chr3.1:83367266-83367285	None:intergenic	45.0%
	GCCCAAAAGGTTCGAATGTA+TGG	-	chr3.1:83369227-83369246	MS.gene32723:CDS	45.0%
	GTTTGCGTAGCAATGTGCAA+AGG	+	chr3.1:83367470-83367489	None:intergenic	45.0%
	TCTTTATAAGGGGGGTCTGA+AGG	+	chr3.1:83368014-83368033	None:intergenic	45.0%
	TGCATATTGCTGCAGCTTCT+GGG	-	chr3.1:83367267-83367286	MS.gene32723:intron	45.0%
	TGTCATATTGTGCAGGCAGT+TGG	-	chr3.1:83368597-83368616	MS.gene32723:intron	45.0%
	TTGCACATTGCTACGCAAAC+TGG	-	chr3.1:83367470-83367489	MS.gene32723:intron	45.0%
	TTGCATATTGCTGCAGCTTC+TGG	-	chr3.1:83367266-83367285	MS.gene32723:intron	45.0%
	TTTATAAGGGGGGTCTGAAG+GGG	+	chr3.1:83368012-83368031	None:intergenic	45.0%
!	ACTAATTTTCCTCCACCAGC+TGG	+	chr3.1:83368942-83368961	None:intergenic	45.0%
!!	AAAACGGGTTCTGAATTGGG+AGG	-	chr3.1:83367667-83367686	MS.gene32723:CDS	45.0%
!!	GCTTGGTGCTATAACTAGCA+TGG	+	chr3.1:83369123-83369142	None:intergenic	45.0%
	AGCTCTTCGTGAAGTGGAGT+AGG	+	chr3.1:83368777-83368796	None:intergenic	50.0%
	AGGGATGTGTCTCATACCTG+TGG	+	chr3.1:83367740-83367759	None:intergenic	50.0%
	CCACAGACGTTCTCATCACA+AGG	-	chr3.1:83367643-83367662	MS.gene32723:CDS	50.0%
	CCTTGTGATGAGAACGTCTG+TGG	+	chr3.1:83367646-83367665	None:intergenic	50.0%
	CTGAATTGGGAGGATGAAGC+AGG	-	chr3.1:83367677-83367696	MS.gene32723:CDS	50.0%
	GACCCTCTCTCCCTTTGATT+CGG	+	chr3.1:83367442-83367461	None:intergenic	50.0%
	GAGAAGTGACATGTGCAGGA+TGG	+	chr3.1:83367708-83367727	None:intergenic	50.0%
	GATCGTAGCTCTTCGTGAAG+TGG	+	chr3.1:83368783-83368802	None:intergenic	50.0%
	GGGATGTGTCTCATACCTGT+GGG	+	chr3.1:83367739-83367758	None:intergenic	50.0%
	GTCCGAATCAAAGGGAGAGA+GGG	-	chr3.1:83367437-83367456	MS.gene32723:intron	50.0%
	TGTCCGAATCAAAGGGAGAG+AGG	-	chr3.1:83367436-83367455	MS.gene32723:intron	50.0%
!	AATTTTCCTCCACCAGCTGG+AGG	+	chr3.1:83368939-83368958	None:intergenic	50.0%
!	ATTTTCCTCCACCAGCTGGA+GGG	+	chr3.1:83368938-83368957	None:intergenic	50.0%
!!	CTCTCCCTTTGATTCGGACA+AGG	+	chr3.1:83367436-83367455	None:intergenic	50.0%
!!	TCTTGCTTGGTTGGCTTCGA+AGG	-	chr3.1:83367615-83367634	MS.gene32723:CDS	50.0%
	ACACTTAACCCTCCAGCTGG+TGG	-	chr3.1:83368927-83368946	MS.gene32723:CDS	55.0%
	GCAACACTTAACCCTCCAGC+TGG	-	chr3.1:83368924-83368943	MS.gene32723:CDS	55.0%
	CTTAACCCTCCAGCTGGTGG+AGG	-	chr3.1:83368930-83368949	MS.gene32723:CDS	60.0%

Chromosome	Type	Strat	End	Strand	Name
chr3.1	gene	83367176	83369389	83367176	ID=MS.gene32723
chr3.1	mRNA	83367176	83369389	83367176	ID=MS.gene32723.t1;Parent=MS.gene32723
chr3.1	exon	83368823	83369389	83368823	ID=MS.gene32723.t1.exon1;Parent=MS.gene32723.t1
chr3.1	CDS	83368823	83369389	83368823	ID=cds.MS.gene32723.t1;Parent=MS.gene32723.t1
chr3.1	exon	83367603	83367953	83367603	ID=MS.gene32723.t1.exon2;Parent=MS.gene32723.t1
chr3.1	CDS	83367603	83367953	83367603	ID=cds.MS.gene32723.t1;Parent=MS.gene32723.t1
chr3.1	exon	83367176	83367217	83367176	ID=MS.gene32723.t1.exon3;Parent=MS.gene32723.t1
chr3.1	CDS	83367176	83367217	83367176	ID=cds.MS.gene32723.t1;Parent=MS.gene32723.t1

Gene Sequence

>MS.gene32723

ATGGGAGATATAGACTTGCTATACAAACTGATTCAAATGGATCCATACATCTTAGAACGCTATAATTTAATACCATTTGTTGATACTCCTTTGCATATTGCTGCAGCTTCTGGGCATGTAAGTTTTGCCACTGAGATTATGAGACTAAAACCTTCATTTGCTTGGAAACTAAACGAGTATGGACTCAGTCCCATACACCTTGCTTTACAAAACAAATATTACAGAATGGTGTGTCGCCTCGTAGACATTAATAAAGACCTTGTCCGAATCAAAGGGAGAGAGGGTCTAACTCCTTTGCACATTGCTACGCAAACTGGAAACTTTGATCTTGTAGTTAAATTCTTGTCGGTTTGTCCAGGTTGTATTGAAGATGTCACAGTTCGAAGTGAGACTGCTTTGCATCTTGCTGTGAAAGATAAGCAGTTTGATGTTCTTGAGATCTTGCTTGGTTGGCTTCGAAGGACATGCCACAGACGTTCTCATCACAAGGAAAAACGGGTTCTGAATTGGGAGGATGAAGCAGGCAACACCATCCTGCACATGTCACTTCTCAATAGCTTCCCACAGGTATGAGACACATCCCTATATTTCTTTTCTTTCTACTTTTTCACATAAATATCTACAAATGTGGCTGATGCGACTGCAATGCATATATGCCTTTAAAATACTTAGGGTACTTTTTTGAAGAGTTTTGGAGAGGAGGAGAAGAGACTTGTTTTTCTTTTGTATTACGGACACTTTAAAATATTTTTTAAAATCAATCAAAAGTTGAAGTATCGTATGATCATTTATCATTTTTTTGAATAACAAATTTATATTAAAATATAGACTTACCCCTTCAGACCCCCCTTATAAAGAGACCCTTAGTTGTTTGGTCTCGAGATATTTCCATAACATTGAAGATCAAACAAAGTTTTATGTAATCGATATTTACTCATGTTTTTAAAAGGATAATATACATTTATTTGATACTATTTAATAAATATCAAATTTTGAAATTTAATAAAATTTTGTTAAATTAATCAACTCAATGACTTTTGATTTGACAATTAAATTGGTGAAATTCAGTGTTTGTTATAATTTTTAAAGTGGAGTAACTCAGTTGAGAGTTAATCTTAGAGCGATTGCAGTTACGTACCTCAATTTAAAACTAATATTTTCTCTGGTCTTATTTATAAGAGACATTTGAGTCAATAAAAGTTAGATGTATCTGATTAAGATTTTGAATTAGATAGATCAACTTTTGTTGACCTAAATATCTCTTATAAATAAGACCAAAGACTAGTAGTTTGATTGAAAATCAAAATCAATCTAAGTTTCAATATATTAATTAATTCAGCTATGGTGTAGTTTGACATTTTCAAATTATTAATAATTTTTCTCTTCTATTTAAAAAAACTAAATTAACTCAGCTATGGTCATGTCATATTGTGCAGGCAGTTGGATTGTTGATAGATAGCAACATAGACATAAATGCCAAGAATTTAGATGAACAAACAGCATTGGACATAGTGGAGCAGATTCAGAGCCAAGTTTATAGTGCAGAAATCAAGGACATGTTGATTAAAGCAGGAGCTTTACATGGTTTTTCACTTGCTCCTACTCCACTTCACGAAGAGCTACGATCAAAAATCACATTTAACGAGAGAATAGCCATTTGTGTTACTCGTTTAAGAAGAAGAATTTCAAATGACACAAGAAACGCTTTGTTAGTAGTTGCTATTCTTTTTGCAACAAGTGCATATGAAGCAACACTTAACCCTCCAGCTGGTGGAGGAAAATTAGTGGTGATGAAAATGCGAACGTACTTCTTAGGGTTTTGGTCGATTAATACATTTTCATTTTATGTTTCAGTTTTGATGATGTGTTTATTAATGCCAAGAGGACGTATAAGTGTTATAGTAACTTGTCCACTTGCTTTATTCTGTGGTTGTTATATGTTTTCCATGCTAGTTATAGCACCAAGCTATACATTTGGAATTGTCACTGTGGCTATTCCATGTATACTTGTGGCAGTGTATTTTTGGGGAGCTATGATATACATTACATTAGCCCAAAAGGTTCGAATGTATGGTCGTGAATGGGAAGATGTATCCAAGTTTTCAGAAGGAAACAAATGGTAAATTGGAGCATCACTCAATTTACGTTCTTGTCTGGTTGTCTTATGGTTAGGAAAGGCCAAGCCAAAGACTTTGTCAACTCGTCAAAATGTAA

Protein sequence

>MS.gene32723.t1

MGDIDLLYKLIQMDPYILERYNLIPFVDTPLHIAAASGHVSFATEIMRLKPSFAWKLNEYGLSPIHLALQNKYYRMVCRLVDINKDLVRIKGREGLTPLHIATQTGNFDLVVKFLSVCPGCIEDVTVRSETALHLAVKDKQFDVLEILLGWLRRTCHRRSHHKEKRVLNWEDEAGNTILHMSLLNSFPQAVGLLIDSNIDINAKNLDEQTALDIVEQIQSQVYSAEIKDMLIKAGALHGFSLAPTPLHEELRSKITFNERIAICVTRLRRRISNDTRNALLVVAILFATSAYEATLNPPAGGGKLVERPSQRLCQLVKM