AlfalfaGEDB | MS.gene07706

M. sativa cultivar XinJiangDaYe / MS.gene07706

KEGG: -
GO: GO:0003674 GO:0005488 GO:0005515
PFAM: PF12796.10 PF13962.9

Nr:

Query id	Subject id	identity %	alignment length	mismatches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
MS.gene07706.t1	XP_024625306.1	70	347	93	4	1	341	1	342	7.40E-66	261.2

Swissprot:

Query id	Subject id	identity %	alignment length	mismatches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
MS.gene07706.t1	Q8GYH5	48.4	310	142	5	8	308	4	304	3.4e-11	70.9

Trembl:

Query id	Subject id	identity %	alignment length	mismatches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
MS.gene07706.t1	A0A396GZH4	70.0	347	93	4	1	341	1	342	5.4e-66	261.2

TFs/TRs:

Gene ID	Type	Classification

Protein Kinases:

Gene ID	Type	Classification

Network:

Co-expression Network:

Gene1	Gene2	correlation coefficient	p_value	FDR

PPI:

Gene1	Gene2	Type
MS.gene07706	MS.gene25515	PPI
MS.gene07706	MS.gene34651	PPI
MS.gene07706	MS.gene32726	PPI
MS.gene07706	MS.gene71122	PPI
MS.gene30172	MS.gene07706	PPI
MS.gene07706	MS.gene22482	PPI
MS.gene07706	MS.gene24922	PPI
MS.gene07706	MS.gene052956	PPI
MS.gene23852	MS.gene07706	PPI
MS.gene07706	MS.gene60920	PPI
MS.gene07706	MS.gene73119	PPI
MS.gene07706	MS.gene92243	PPI
MS.gene97943	MS.gene07706	PPI
MS.gene07706	MS.gene037950	PPI
MS.gene07706	MS.gene34009	PPI
MS.gene67157	MS.gene07706	PPI
MS.gene07706	MS.gene018518	PPI
MS.gene07706	MS.gene043662	PPI
MS.gene07706	MS.gene004844	PPI
MS.gene07706	MS.gene99588	PPI
MS.gene07706	MS.gene21888	PPI
MS.gene07706	MS.gene54764	PPI
MS.gene07706	MS.gene066500	PPI
MS.gene07706	MS.gene27223	PPI
MS.gene07706	MS.gene39623	PPI
MS.gene063222	MS.gene07706	PPI
MS.gene07706	MS.gene066464	PPI
MS.gene07706	MS.gene25024	PPI
MS.gene07706	MS.gene012203	PPI
MS.gene07706	MS.gene26019	PPI
MS.gene07706	MS.gene022109	PPI
MS.gene07706	MS.gene050272	PPI
MS.gene69687	MS.gene07706	PPI
MS.gene035805	MS.gene07706	PPI
MS.gene07706	MS.gene63085	PPI
MS.gene07706	MS.gene30176	PPI
MS.gene07706	MS.gene81055	PPI
MS.gene07706	MS.gene65775	PPI
MS.gene23810	MS.gene07706	PPI
MS.gene07706	MS.gene99554	PPI
MS.gene07706	MS.gene32723	PPI
MS.gene07706	MS.gene80163	PPI
MS.gene07706	MS.gene02469	PPI
MS.gene07706	MS.gene066467	PPI
MS.gene78281	MS.gene07706	PPI
MS.gene07706	MS.gene024753	PPI
MS.gene07706	MS.gene045937	PPI
MS.gene07706	MS.gene51278	PPI
MS.gene07706	MS.gene69966	PPI
MS.gene24806	MS.gene07706	PPI
MS.gene071113	MS.gene07706	PPI
MS.gene07706	MS.gene85534	PPI
MS.gene027071	MS.gene07706	PPI
MS.gene07706	MS.gene51262	PPI
MS.gene07706	MS.gene23881	PPI
MS.gene07706	MS.gene26672	PPI
MS.gene07706	MS.gene014931	PPI
MS.gene07706	MS.gene062662	PPI
MS.gene07706	MS.gene97379	PPI
MS.gene010910	MS.gene07706	PPI
MS.gene066464	MS.gene07706	PPI
MS.gene07706	MS.gene30177	PPI
MS.gene07706	MS.gene70008	PPI
MS.gene07706	MS.gene008767	PPI
MS.gene027074	MS.gene07706	PPI
MS.gene07706	MS.gene071113	PPI
MS.gene07706	MS.gene90400	PPI
MS.gene07706	MS.gene82740	PPI
MS.gene010912	MS.gene07706	PPI
MS.gene07706	MS.gene09785	PPI
MS.gene07706	MS.gene64441	PPI
MS.gene07706	MS.gene041770	PPI
MS.gene23811	MS.gene07706	PPI
MS.gene07706	MS.gene23810	PPI
MS.gene07706	MS.gene33377	PPI
MS.gene51335	MS.gene07706	PPI
MS.gene07706	MS.gene51335	PPI
MS.gene07706	MS.gene027073	PPI
MS.gene07706	MS.gene027072	PPI
MS.gene005995	MS.gene07706	PPI
MS.gene07706	MS.gene65463	PPI
MS.gene037950	MS.gene07706	PPI
MS.gene07706	MS.gene007485	PPI
MS.gene068249	MS.gene07706	PPI
MS.gene07706	MS.gene87218	PPI
MS.gene07706	MS.gene025229	PPI
MS.gene07706	MS.gene30433	PPI
MS.gene07706	MS.gene066501	PPI
MS.gene07706	MS.gene043742	PPI
MS.gene07706	MS.gene027075	PPI
MS.gene07706	MS.gene027441	PPI
MS.gene07706	MS.gene061932	PPI
MS.gene07706	MS.gene050457	PPI
MS.gene07706	MS.gene99973	PPI
MS.gene07706	MS.gene21734	PPI
MS.gene07706	MS.gene30174	PPI
MS.gene07706	MS.gene008833	PPI
MS.gene039682	MS.gene07706	PPI
MS.gene07706	MS.gene23811	PPI
MS.gene07706	MS.gene25244	PPI
MS.gene07706	MS.gene064542	PPI
MS.gene07706	MS.gene051003	PPI
MS.gene47479	MS.gene07706	PPI
MS.gene07706	MS.gene48655	PPI
MS.gene07706	MS.gene23196	PPI
MS.gene07706	MS.gene066046	PPI
MS.gene07706	MS.gene007486	PPI
MS.gene07706	MS.gene89986	PPI
MS.gene71204	MS.gene07706	PPI
MS.gene07706	MS.gene050270	PPI
MS.gene07706	MS.gene08470	PPI
MS.gene07706	MS.gene34712	PPI
MS.gene07706	MS.gene058128	PPI
MS.gene36842	MS.gene07706	PPI
MS.gene07706	MS.gene007487	PPI
MS.gene07706	MS.gene065848	PPI
MS.gene07706	MS.gene037184	PPI
MS.gene07706	MS.gene068249	PPI
MS.gene066501	MS.gene07706	PPI
MS.gene07706	MS.gene067705	PPI
MS.gene07706	MS.gene71204	PPI
MS.gene07706	MS.gene038519	PPI
MS.gene07706	MS.gene41291	PPI
MS.gene056455	MS.gene07706	PPI
MS.gene07706	MS.gene042783	PPI
MS.gene07706	MS.gene97943	PPI
MS.gene07706	MS.gene26021	PPI
MS.gene07706	MS.gene050456	PPI
MS.gene69965	MS.gene07706	PPI
MS.gene07706	MS.gene51258	PPI
MS.gene07706	MS.gene053363	PPI
MS.gene26532	MS.gene07706	PPI
MS.gene07706	MS.gene91775	PPI

Query id	Subject id	identity %	alignment length	mismatches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
MS.gene07706.t1	MTR_7g451420	69.677	310	89	3	8	317	8	312	6.22e-148	421
MS.gene07706.t1	MTR_8g467780	58.857	350	130	4	3	339	5	353	4.25e-131	383
MS.gene07706.t1	MTR_8g066670	61.739	345	121	4	1	339	1067	1406	3.42e-130	406
MS.gene07706.t1	MTR_8g072510	58.997	339	126	5	8	339	9	341	3.59e-128	375
MS.gene07706.t1	MTR_8g039620	58.824	340	128	4	8	339	13	348	1.34e-127	373
MS.gene07706.t1	MTR_8g073260	59.248	319	125	2	7	325	9	322	3.65e-126	370
MS.gene07706.t1	MTR_3g016210	56.522	345	128	5	14	339	15	356	5.65e-126	369
MS.gene07706.t1	MTR_1g059930	55.650	354	142	5	1	344	1	349	5.96e-121	356
MS.gene07706.t1	MTR_7g021090	55.491	346	136	4	1	339	1	335	5.13e-120	353
MS.gene07706.t1	MTR_8g069880	58.754	337	128	4	9	339	7	338	1.98e-118	351
MS.gene07706.t1	MTR_8g062410	58.529	340	121	6	8	339	9	336	1.69e-117	348
MS.gene07706.t1	MTR_8g068990	53.868	349	134	6	1	339	1	332	9.54e-117	346
MS.gene07706.t1	MTR_8g040930	56.229	297	122	3	52	342	2	296	1.35e-108	323
MS.gene07706.t1	MTR_8g041240	56.229	297	122	3	52	342	2	296	1.35e-108	323
MS.gene07706.t1	MTR_3g105650	44.590	305	156	4	17	314	13	311	3.36e-86	267
MS.gene07706.t1	MTR_8g073275	42.740	365	136	10	52	355	2	354	3.09e-78	248
MS.gene07706.t1	MTR_1g069110	26.645	304	195	9	18	317	27	306	1.81e-22	98.6
MS.gene07706.t1	MTR_7g099580	28.431	306	163	10	17	317	20	274	7.85e-21	92.4
MS.gene07706.t1	MTR_7g099570	30.481	187	116	3	18	199	18	195	1.75e-16	81.3
MS.gene07706.t1	MTR_2g101320	27.500	240	145	6	40	263	137	363	1.55e-15	78.6
MS.gene07706.t1	MTR_1g115575	25.413	303	183	8	44	325	169	449	4.86e-13	70.9
MS.gene07706.t1	MTR_7g117620	27.468	233	149	4	44	273	119	334	1.81e-12	68.9
MS.gene07706.t1	MTR_4g062100	25.000	232	156	3	45	273	109	325	3.18e-12	68.2
MS.gene07706.t1	MTR_2g101310	27.979	193	126	4	40	232	137	316	4.01e-12	67.8
MS.gene07706.t1	MTR_2g101310	27.979	193	126	4	40	232	137	316	8.74e-12	66.6
MS.gene07706.t1	MTR_1g032100	26.606	218	136	6	44	253	94	295	2.25e-11	65.5
MS.gene07706.t1	MTR_5g085500	30.380	158	100	3	78	234	8	156	3.33e-11	64.7

Query id	Subject id	identity %	alignment length	mismatches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
MS.gene07706.t1	AT4G10720	38.596	342	189	5	1	332	1	331	1.42e-73	234
MS.gene07706.t1	AT4G10720	38.286	350	195	5	1	340	1	339	2.57e-73	234
MS.gene07706.t1	AT5G54620	40.777	309	172	4	9	311	6	309	1.61e-65	214
MS.gene07706.t1	AT5G54610	39.032	310	171	5	8	308	4	304	1.57e-61	203
MS.gene07706.t1	AT5G15500	39.228	311	168	7	17	315	14	315	8.57e-60	200
MS.gene07706.t1	AT1G14480	35.882	340	187	7	8	329	4	330	3.09e-59	198
MS.gene07706.t1	AT1G14500	34.985	323	196	4	8	321	4	321	3.02e-57	192
MS.gene07706.t1	AT1G14480	34.365	323	172	6	8	329	4	287	5.35e-47	164
MS.gene07706.t1	AT5G51160	29.588	267	163	6	71	320	43	301	6.98e-27	111
MS.gene07706.t1	AT5G15500	33.484	221	120	9	110	315	1	209	3.32e-21	94.0
MS.gene07706.t1	AT2G01680	29.167	216	129	6	44	251	97	296	2.96e-15	77.4
MS.gene07706.t1	AT4G03500	26.923	312	162	12	43	314	194	479	1.53e-14	75.5
MS.gene07706.t1	AT4G03500	26.923	312	162	12	43	314	194	479	1.53e-14	75.5
MS.gene07706.t1	AT4G03500	26.923	312	162	12	43	314	217	502	1.58e-14	75.5
MS.gene07706.t1	AT4G03460	31.278	227	114	9	100	314	258	454	2.44e-14	74.7
MS.gene07706.t1	AT4G03460	31.278	227	114	9	100	314	290	486	2.59e-14	74.7
MS.gene07706.t1	AT5G54710	28.679	265	149	10	79	317	246	496	2.65e-12	68.6
MS.gene07706.t1	AT5G54710	28.679	265	149	10	79	317	201	451	2.73e-12	68.6
MS.gene07706.t1	AT5G02620	24.554	224	153	3	19	242	70	277	2.98e-11	65.1
MS.gene07706.t1	AT5G02620	24.554	224	153	3	19	242	70	277	2.98e-11	65.1
MS.gene07706.t1	AT5G02620	24.554	224	153	3	19	242	70	277	2.98e-11	65.1
MS.gene07706.t1	AT5G50140	24.074	270	173	7	38	288	24	280	4.99e-11	64.3

Find 81 sgRNAs with CRISPR-Local

Find 132 sgRNAs with CRISPR-GE

CRISPR-Local

CRISPR-Local
sgRNA_sequence	on_target_score	Position	Region
AAAGACCTTGTTAGAATTAA+AGG	0.138850	4.1:+43069757	MS.gene07706:CDS
TAAGGATGATCCATCCATTT+TGG	0.181943	4.1:+43069537	MS.gene07706:CDS
TAGAATATAAAATATTAAAT+TGG	0.253258	4.1:+43069992	MS.gene07706:CDS
CTTCATATTGCAAGTCAAAT+TGG	0.274428	4.1:+43069799	MS.gene07706:CDS
CGAATGTATATTATCCAAAA+TGG	0.279507	4.1:-43069551	None:intergenic
CATCCTCTACACAGTAATTA+AGG	0.299377	4.1:+43069519	MS.gene07706:CDS
CACCGGGTCCGGATAGATTA+TGG	0.305362	4.1:+43071142	MS.gene07706:CDS
AGCGAAGCGCCATCCTGTTT+TGG	0.323705	4.1:-43069720	None:intergenic
TTCAGTTTATAAATTAGATT+GGG	0.335488	4.1:-43069469	None:intergenic
TGACGGCCAATGTAGATATT+AGG	0.348577	4.1:+43070476	MS.gene07706:CDS
TTTCAGTTTATAAATTAGAT+TGG	0.351179	4.1:-43069470	None:intergenic
TAAATTCCTCATTGCTTGTC+AGG	0.384221	4.1:+43069840	MS.gene07706:CDS
CTTTGCATATCGCCGCATCT+AGG	0.387295	4.1:+43069593	MS.gene07706:CDS
AAGGTTATGGTCACCGGGTC+CGG	0.393943	4.1:+43071131	MS.gene07706:CDS
TTGTGCTAAAATGTGCAAAA+TGG	0.415943	4.1:-43070034	None:intergenic
AAAGACAAGGATAAATTTGA+AGG	0.432984	4.1:+43070420	MS.gene07706:CDS
TTTGCATATCGCCGCATCTA+GGG	0.439653	4.1:+43069594	MS.gene07706:CDS
CCGGTGACCATAACCTTGAT+TGG	0.450763	4.1:-43071125	None:intergenic
AGAAACACCAATCAAGGTTA+TGG	0.451091	4.1:+43071118	MS.gene07706:CDS
TGCAAAGGAGTTTCAACAAA+CGG	0.452128	4.1:-43069577	None:intergenic
TTTCAAATTCATAACCTCAA+TGG	0.456133	4.1:-43069632	None:intergenic
CTATGGAAAACAGCCAAAAC+AGG	0.465031	4.1:+43069707	MS.gene07706:CDS
TTCTAGGTAGCACAGGCGCT+TGG	0.467704	4.1:+43070388	MS.gene07706:intron
CTTAGTTTATATGCAAGTGT+TGG	0.472326	4.1:-43070550	None:intergenic
ATCGTTACTCTAGGAAATAC+TGG	0.476716	4.1:+43070763	MS.gene07706:CDS
GCATATCCGGTTTGCCATTG+AGG	0.477173	4.1:+43069618	MS.gene07706:CDS
TCATAACCTCAATGGCAAAC+CGG	0.477798	4.1:-43069624	None:intergenic
CCTCGCAGTCACATCTTCAA+TGG	0.482300	4.1:-43069866	None:intergenic
CCCTTCCTTTAATTCTAACA+AGG	0.482377	4.1:-43069762	None:intergenic
CGATCAAACCATAATCTATC+CGG	0.483747	4.1:-43071150	None:intergenic
CCAATCAAGGTTATGGTCAC+CGG	0.490176	4.1:+43071125	MS.gene07706:CDS
TTGGAGCATCGGTGACTTGT+TGG	0.497457	4.1:-43070531	None:intergenic
GAGCCCTCTCCACCTTGCTA+TGG	0.499528	4.1:+43069690	MS.gene07706:CDS
TTAAGCTTCGAAGCAAATGA+AGG	0.502154	4.1:-43069655	None:intergenic
CAGTTTATTATCTCTAATTG+TGG	0.505449	4.1:-43070581	None:intergenic
AGTTAAATCATTGATGCAAT+CGG	0.506582	4.1:+43071095	MS.gene07706:CDS
GGGACTCAATGATGATTGAT+AGG	0.508072	4.1:-43070692	None:intergenic
AATATTAAATTGGAAGGATG+AGG	0.519869	4.1:+43070002	MS.gene07706:CDS
AGGAGTATATTGTTGAGTGC+AGG	0.521591	4.1:+43070496	MS.gene07706:CDS
GCATCGGTGACTTGTTGGCC+AGG	0.522642	4.1:-43070526	None:intergenic
CTTGTTAGAATTAAAGGAAG+GGG	0.524352	4.1:+43069763	MS.gene07706:CDS
TTGCATATCGCCGCATCTAG+GGG	0.527689	4.1:+43069595	MS.gene07706:CDS
ATTTCATTTCTAGGTAGCAC+AGG	0.528889	4.1:+43070381	MS.gene07706:intron
ATATGCAAGTGTTGGAGCAT+CGG	0.532301	4.1:-43070542	None:intergenic
CAATCATCATTGAGTCCCAC+TGG	0.542164	4.1:+43070697	MS.gene07706:CDS
ACCTTGTTAGAATTAAAGGA+AGG	0.545216	4.1:+43069761	MS.gene07706:CDS
AATCGGAGAAACACCAATCA+AGG	0.549153	4.1:+43071112	MS.gene07706:CDS
GATGTAGACATCGTTACTCT+AGG	0.553953	4.1:+43070754	MS.gene07706:CDS
ATTTGACTTGCAATATGAAG+AGG	0.556104	4.1:-43069796	None:intergenic
TTTCCATAGCAAGGTGGAGA+GGG	0.556707	4.1:-43069693	None:intergenic
TGTATATTATCCAAAATGGA+TGG	0.561356	4.1:-43069547	None:intergenic
GGAGTTTATCAAGTTAGTGC+TGG	0.563187	4.1:+43070721	MS.gene07706:CDS
ATATAAAATATTAAATTGGA+AGG	0.566615	4.1:+43069996	MS.gene07706:CDS
CAGTGGAGCAACGTAACACT+TGG	0.567850	4.1:+43070638	MS.gene07706:CDS
GTTAGAATTAAAGGAAGGGG+AGG	0.574654	4.1:+43069766	MS.gene07706:CDS
AACCATAATCTATCCGGACC+CGG	0.575230	4.1:-43071144	None:intergenic
AAGACAAGGATAAATTTGAA+GGG	0.577076	4.1:+43070421	MS.gene07706:CDS
CAATCAAGGTTATGGTCACC+GGG	0.583109	4.1:+43071126	MS.gene07706:CDS
CCTTGTTAGAATTAAAGGAA+GGG	0.591674	4.1:+43069762	MS.gene07706:CDS
CATCCTTAATTACTGTGTAG+AGG	0.592515	4.1:-43069522	None:intergenic
GCTTCGAAGCTTAATTCGCA+AGG	0.593504	4.1:+43069664	MS.gene07706:CDS
TATACTCCTAATATCTACAT+TGG	0.605385	4.1:-43070482	None:intergenic
CTAGATGCGGCGATATGCAA+AGG	0.606329	4.1:-43069592	None:intergenic
AAAATATCAAGAGAGGTGCT+AGG	0.606950	4.1:+43069965	MS.gene07706:CDS
TCATCATTGAGTCCCACTGG+TGG	0.616877	4.1:+43070700	MS.gene07706:CDS
TTGGATTGTTGTTAAAGACA+AGG	0.621765	4.1:+43070407	MS.gene07706:CDS
TCAGTTTATAAATTAGATTG+GGG	0.634387	4.1:-43069468	None:intergenic
GGAAAACAGCCAAAACAGGA+TGG	0.635377	4.1:+43069711	MS.gene07706:CDS
TATTGCAAGTCAAATTGGAG+AGG	0.642645	4.1:+43069804	MS.gene07706:CDS
AACTTGATAAACTCCACCAG+TGG	0.648493	4.1:-43070713	None:intergenic
CATTGAAGATGTGACTGCGA+GGG	0.648859	4.1:+43069867	MS.gene07706:CDS
TAACACTTGGATGATAGTTG+CGG	0.650738	4.1:+43070651	MS.gene07706:CDS
TTGAGTGCAGGTGTAAAACC+TGG	0.654502	4.1:+43070508	MS.gene07706:CDS
TGCATATCGCCGCATCTAGG+GGG	0.655530	4.1:+43069596	MS.gene07706:CDS
CCATTGAAGATGTGACTGCG+AGG	0.657318	4.1:+43069866	MS.gene07706:CDS
ACTTGATAAACTCCACCAGT+GGG	0.663884	4.1:-43070712	None:intergenic
TGGAATCCTGACAAGCAATG+AGG	0.669506	4.1:-43069846	None:intergenic
CAAAACAGCATTAGACATGA+CGG	0.677185	4.1:+43070459	MS.gene07706:CDS
ACAAAGGAATATCGAGCCAG+AGG	0.677428	4.1:+43070053	MS.gene07706:CDS
ATTGAAGATGTGACTGCGAG+GGG	0.694619	4.1:+43069868	MS.gene07706:CDS
ACTCAATGATGATTGATAGG+TGG	0.718600	4.1:-43070689	None:intergenic

CRISPR-GE

badsite warning	sgRNA_sequence	Strand	Position	Region	GC_content
!!	AAATATCACATAAAAAAATA+GGG	+	chr4.1:43070238-43070257	MS.gene07706:intron	10.0%
!!	ATATAAAATATTAAATTGGA+AGG	+	chr4.1:43069996-43070015	MS.gene07706:CDS	10.0%
!!!	TTAATATATGAATACATTTT+GGG	+	chr4.1:43070261-43070280	MS.gene07706:intron	10.0%
!!	GAAATATCACATAAAAAAAT+AGG	+	chr4.1:43070237-43070256	MS.gene07706:intron	15.0%
!!	TTAGAAAAAATATCTACAAA+AGG	-	chr4.1:43070082-43070101	None:intergenic	15.0%
!!	TTCAGTTTATAAATTAGATT+GGG	-	chr4.1:43069472-43069491	None:intergenic	15.0%
!!	TTTCAGTTTATAAATTAGAT+TGG	-	chr4.1:43069473-43069492	None:intergenic	15.0%
!!!	GTTAATATATGAATACATTT+TGG	+	chr4.1:43070260-43070279	MS.gene07706:intron	15.0%
!!	CAAAAATATGAAAACAACTA+TGG	-	chr4.1:43070983-43071002	None:intergenic	20.0%
!!	TCAGTTTATAAATTAGATTG+GGG	-	chr4.1:43069471-43069490	None:intergenic	20.0%
!	AAAGACAAGGATAAATTTGA+AGG	+	chr4.1:43070420-43070439	MS.gene07706:CDS	25.0%
!	AAAGACCTTGTTAGAATTAA+AGG	+	chr4.1:43069757-43069776	MS.gene07706:CDS	25.0%
!	AAATTTGAAGGGAAAAAACT+TGG	+	chr4.1:43070432-43070451	MS.gene07706:CDS	25.0%
!	AAGACAAGGATAAATTTGAA+GGG	+	chr4.1:43070421-43070440	MS.gene07706:CDS	25.0%
!	AATATTAAATTGGAAGGATG+AGG	+	chr4.1:43070002-43070021	MS.gene07706:CDS	25.0%
!	AATGAAAACATCAAGAAATC+AGG	-	chr4.1:43070808-43070827	None:intergenic	25.0%
!	ACATAGAAAATAAGAACGAA+AGG	-	chr4.1:43070933-43070952	None:intergenic	25.0%
!	AGTTAAATCATTGATGCAAT+CGG	+	chr4.1:43071095-43071114	MS.gene07706:CDS	25.0%
!	ATATTTATTATGATGCCAAG+AGG	+	chr4.1:43070865-43070884	MS.gene07706:intron	25.0%
!	CAGTTTATTATCTCTAATTG+TGG	-	chr4.1:43070584-43070603	None:intergenic	25.0%
!	CATAGAAAATAAGAACGAAA+GGG	-	chr4.1:43070932-43070951	None:intergenic	25.0%
!	CATTGCAAAAAATATAACAG+TGG	+	chr4.1:43070621-43070640	MS.gene07706:CDS	25.0%
!	CGAATGTATATTATCCAAAA+TGG	-	chr4.1:43069554-43069573	None:intergenic	25.0%
!	TATACTCCTAATATCTACAT+TGG	-	chr4.1:43070485-43070504	None:intergenic	25.0%
!	TATTTATTATGATGCCAAGA+GGG	+	chr4.1:43070866-43070885	MS.gene07706:intron	25.0%
!	TGTATATTATCCAAAATGGA+TGG	-	chr4.1:43069550-43069569	None:intergenic	25.0%
!	TTCAAATGATAGTAAAGGTT+CGG	-	chr4.1:43070212-43070231	None:intergenic	25.0%
!	TTCGATTCAAATGATAGTAA+AGG	-	chr4.1:43070217-43070236	None:intergenic	25.0%
!	TTTCAAATTCATAACCTCAA+TGG	-	chr4.1:43069635-43069654	None:intergenic	25.0%
!!!	CATAGTTGATAAAAAAAAGG+AGG	-	chr4.1:43070842-43070861	None:intergenic	25.0%
!!!	CTCCTTTTTTTTATCAACTA+TGG	+	chr4.1:43070840-43070859	MS.gene07706:intron	25.0%
!!!	TGCCATAGTTGATAAAAAAA+AGG	-	chr4.1:43070845-43070864	None:intergenic	25.0%
!!!	TTTCGTTCTTATTTTCTATG+TGG	+	chr4.1:43070932-43070951	MS.gene07706:intron	25.0%
	ACCTTGTTAGAATTAAAGGA+AGG	+	chr4.1:43069761-43069780	MS.gene07706:CDS	30.0%
	CATCGAAAAAATATCAAGAG+AGG	+	chr4.1:43069958-43069977	MS.gene07706:CDS	30.0%
	CCTTGTTAGAATTAAAGGAA+GGG	+	chr4.1:43069762-43069781	MS.gene07706:CDS	30.0%
	CTTAGTTTATATGCAAGTGT+TGG	-	chr4.1:43070553-43070572	None:intergenic	30.0%
	CTTCATATTGCAAGTCAAAT+TGG	+	chr4.1:43069799-43069818	MS.gene07706:CDS	30.0%
	CTTGTTAGAATTAAAGGAAG+GGG	+	chr4.1:43069763-43069782	MS.gene07706:CDS	30.0%
	TCAAATGATAGTAAAGGTTC+GGG	-	chr4.1:43070211-43070230	None:intergenic	30.0%
	TGTGAAAAATAACAAGTACG+AGG	+	chr4.1:43069912-43069931	MS.gene07706:CDS	30.0%
	TTGTGCTAAAATGTGCAAAA+TGG	-	chr4.1:43070037-43070056	None:intergenic	30.0%
!	TTGGATTGTTGTTAAAGACA+AGG	+	chr4.1:43070407-43070426	MS.gene07706:CDS	30.0%
!!	ATTTGACTTGCAATATGAAG+AGG	-	chr4.1:43069799-43069818	None:intergenic	30.0%
!!	GTCTTGTTGATTTCATTTCT+AGG	+	chr4.1:43070372-43070391	MS.gene07706:intron	30.0%
!!	TTTTGCACATTTTAGCACAA+AGG	+	chr4.1:43070037-43070056	MS.gene07706:CDS	30.0%
!!!	TGCAGATTTTAGTTGACAAT+AGG	+	chr4.1:43070332-43070351	MS.gene07706:intron	30.0%
	ACTCAATGATGATTGATAGG+TGG	-	chr4.1:43070692-43070711	None:intergenic	35.0%
	AGAAACACCAATCAAGGTTA+TGG	+	chr4.1:43071118-43071137	MS.gene07706:CDS	35.0%
	CAAAACAGCATTAGACATGA+CGG	+	chr4.1:43070459-43070478	MS.gene07706:CDS	35.0%
	CATCCTCTACACAGTAATTA+AGG	+	chr4.1:43069519-43069538	MS.gene07706:CDS	35.0%
	CATCCTTAATTACTGTGTAG+AGG	-	chr4.1:43069525-43069544	None:intergenic	35.0%
	CCCTTCCTTTAATTCTAACA+AGG	-	chr4.1:43069765-43069784	None:intergenic	35.0%
	CGATCAAACCATAATCTATC+CGG	-	chr4.1:43071153-43071172	None:intergenic	35.0%
	TAAATTCCTCATTGCTTGTC+AGG	+	chr4.1:43069840-43069859	MS.gene07706:CDS	35.0%
	TAACACTTGGATGATAGTTG+CGG	+	chr4.1:43070651-43070670	MS.gene07706:CDS	35.0%
	TATCTACAAAAGGTTACCTC+TGG	-	chr4.1:43070072-43070091	None:intergenic	35.0%
	TATGAAAACAACTATGGCAC+TGG	-	chr4.1:43070977-43070996	None:intergenic	35.0%
	TATTGCAAGTCAAATTGGAG+AGG	+	chr4.1:43069804-43069823	MS.gene07706:CDS	35.0%
	TGCAAAGGAGTTTCAACAAA+CGG	-	chr4.1:43069580-43069599	None:intergenic	35.0%
	TTAAGCTTCGAAGCAAATGA+AGG	-	chr4.1:43069658-43069677	None:intergenic	35.0%
!	ATCGTTACTCTAGGAAATAC+TGG	+	chr4.1:43070763-43070782	MS.gene07706:CDS	35.0%
!	ATTTCATTTCTAGGTAGCAC+AGG	+	chr4.1:43070381-43070400	MS.gene07706:intron	35.0%
!	TAAGGATGATCCATCCATTT+TGG	+	chr4.1:43069537-43069556	MS.gene07706:CDS	35.0%
!!	AAAATATCAAGAGAGGTGCT+AGG	+	chr4.1:43069965-43069984	MS.gene07706:CDS	35.0%
	AACTTGATAAACTCCACCAG+TGG	-	chr4.1:43070716-43070735	None:intergenic	40.0%
	AATCGGAGAAACACCAATCA+AGG	+	chr4.1:43071112-43071131	MS.gene07706:CDS	40.0%
	AATGATAGTAAAGGTTCGGG+TGG	-	chr4.1:43070208-43070227	None:intergenic	40.0%
	ACTTGATAAACTCCACCAGT+GGG	-	chr4.1:43070715-43070734	None:intergenic	40.0%
	CTATGGAAAACAGCCAAAAC+AGG	+	chr4.1:43069707-43069726	MS.gene07706:CDS	40.0%
	GATGTAGACATCGTTACTCT+AGG	+	chr4.1:43070754-43070773	MS.gene07706:CDS	40.0%
	GGAGTTTATCAAGTTAGTGC+TGG	+	chr4.1:43070721-43070740	MS.gene07706:CDS	40.0%
	GGGACTCAATGATGATTGAT+AGG	-	chr4.1:43070695-43070714	None:intergenic	40.0%
	GTTAGAATTAAAGGAAGGGG+AGG	+	chr4.1:43069766-43069785	MS.gene07706:CDS	40.0%
	TATTATGATGCCAAGAGGGA+TGG	+	chr4.1:43070870-43070889	MS.gene07706:intron	40.0%
	TCATAACCTCAATGGCAAAC+CGG	-	chr4.1:43069627-43069646	None:intergenic	40.0%
	TGACGGCCAATGTAGATATT+AGG	+	chr4.1:43070476-43070495	MS.gene07706:CDS	40.0%
!	AGGAGTATATTGTTGAGTGC+AGG	+	chr4.1:43070496-43070515	MS.gene07706:CDS	40.0%
!!	ATATGCAAGTGTTGGAGCAT+CGG	-	chr4.1:43070545-43070564	None:intergenic	40.0%
!!	TTTGGCTGTTTTCCATAGCA+AGG	-	chr4.1:43069705-43069724	None:intergenic	40.0%
	AACCATAATCTATCCGGACC+CGG	-	chr4.1:43071147-43071166	None:intergenic	45.0%
	ACAAAGGAATATCGAGCCAG+AGG	+	chr4.1:43070053-43070072	MS.gene07706:CDS	45.0%
	ATTGAAGATGTGACTGCGAG+GGG	+	chr4.1:43069868-43069887	MS.gene07706:CDS	45.0%
	CAATCAAGGTTATGGTCACC+GGG	+	chr4.1:43071126-43071145	MS.gene07706:CDS	45.0%
	CAATCATCATTGAGTCCCAC+TGG	+	chr4.1:43070697-43070716	MS.gene07706:CDS	45.0%
	CATTGAAGATGTGACTGCGA+GGG	+	chr4.1:43069867-43069886	MS.gene07706:CDS	45.0%
	CCAATCAAGGTTATGGTCAC+CGG	+	chr4.1:43071125-43071144	MS.gene07706:CDS	45.0%
	GAAAGGGCAAACTAAGCCAT+TGG	-	chr4.1:43070916-43070935	None:intergenic	45.0%
	GCTTCGAAGCTTAATTCGCA+AGG	+	chr4.1:43069664-43069683	MS.gene07706:CDS	45.0%
	GGAAAACAGCCAAAACAGGA+TGG	+	chr4.1:43069711-43069730	MS.gene07706:CDS	45.0%
	TGGAATCCTGACAAGCAATG+AGG	-	chr4.1:43069849-43069868	None:intergenic	45.0%
	TTGAGTGCAGGTGTAAAACC+TGG	+	chr4.1:43070508-43070527	MS.gene07706:CDS	45.0%
	TTTCCATAGCAAGGTGGAGA+GGG	-	chr4.1:43069696-43069715	None:intergenic	45.0%
	TTTGCATATCGCCGCATCTA+GGG	+	chr4.1:43069594-43069613	MS.gene07706:CDS	45.0%
	TTTGGGAGAGAGAGAGAGAA+GGG	+	chr4.1:43070278-43070297	MS.gene07706:intron	45.0%
!	CTTTCTAGTGGCTCTTCCAA+TGG	+	chr4.1:43070897-43070916	MS.gene07706:intron	45.0%
!	TTTTCCATAGCAAGGTGGAG+AGG	-	chr4.1:43069697-43069716	None:intergenic	45.0%
!!	TATGGCACTGGTATCTGTAG+AGG	-	chr4.1:43070965-43070984	None:intergenic	45.0%
!!	TTTTGGGAGAGAGAGAGAGA+AGG	+	chr4.1:43070277-43070296	MS.gene07706:intron	45.0%
!!	TAGAATATAAAATATTAAAT+TGG	+	chr4.1:43069992-43070011	MS.gene07706:CDS	5.0%
	ATGATGCCAAGAGGGATGGT+GGG	+	chr4.1:43070874-43070893	MS.gene07706:intron	50.0%
	CAGTGGAGCAACGTAACACT+TGG	+	chr4.1:43070638-43070657	MS.gene07706:CDS	50.0%
	CCATTGAAGATGTGACTGCG+AGG	+	chr4.1:43069866-43069885	MS.gene07706:CDS	50.0%
	CCGGTGACCATAACCTTGAT+TGG	-	chr4.1:43071128-43071147	None:intergenic	50.0%
	CCTCGCAGTCACATCTTCAA+TGG	-	chr4.1:43069869-43069888	None:intergenic	50.0%
	CTAGATGCGGCGATATGCAA+AGG	-	chr4.1:43069595-43069614	None:intergenic	50.0%
	CTTTGCATATCGCCGCATCT+AGG	+	chr4.1:43069593-43069612	MS.gene07706:CDS	50.0%
	TATGATGCCAAGAGGGATGG+TGG	+	chr4.1:43070873-43070892	MS.gene07706:intron	50.0%
	TCATCATTGAGTCCCACTGG+TGG	+	chr4.1:43070700-43070719	MS.gene07706:CDS	50.0%
	TTGCATATCGCCGCATCTAG+GGG	+	chr4.1:43069595-43069614	MS.gene07706:CDS	50.0%
	TTGGGAGAGAGAGAGAGAAG+GGG	+	chr4.1:43070279-43070298	MS.gene07706:intron	50.0%
!	GCATATCCGGTTTGCCATTG+AGG	+	chr4.1:43069618-43069637	MS.gene07706:CDS	50.0%
!!	GGCTGTTTTCCATAGCAAGG+TGG	-	chr4.1:43069702-43069721	None:intergenic	50.0%
!!	TTGGAGCATCGGTGACTTGT+TGG	-	chr4.1:43070534-43070553	None:intergenic	50.0%
	AAGGTTATGGTCACCGGGTC+CGG	+	chr4.1:43071131-43071150	MS.gene07706:CDS	55.0%
	AGAAAGCCCACCATCCCTCT+TGG	-	chr4.1:43070883-43070902	None:intergenic	55.0%
	CACCGGGTCCGGATAGATTA+TGG	+	chr4.1:43071142-43071161	MS.gene07706:CDS	55.0%
	TGCATATCGCCGCATCTAGG+GGG	+	chr4.1:43069596-43069615	MS.gene07706:CDS	55.0%
	TGGGAGAGAGAGAGAGAAGG+GGG	+	chr4.1:43070280-43070299	MS.gene07706:intron	55.0%
	TTCTAGGTAGCACAGGCGCT+TGG	+	chr4.1:43070388-43070407	MS.gene07706:intron	55.0%
!!	AGCGAAGCGCCATCCTGTTT+TGG	-	chr4.1:43069723-43069742	None:intergenic	55.0%
!!	AGGGATGGTGGGCTTTCTAG+TGG	+	chr4.1:43070885-43070904	MS.gene07706:intron	55.0%
	CCGGATATGCCCCCTAGATG+CGG	-	chr4.1:43069608-43069627	None:intergenic	60.0%
	GAGCCCTCTCCACCTTGCTA+TGG	+	chr4.1:43069690-43069709	MS.gene07706:CDS	60.0%
	GGAGAGAGAGAGAGAAGGGG+GGG	+	chr4.1:43070282-43070301	MS.gene07706:intron	60.0%
	GGGAGAGAGAGAGAGAAGGG+GGG	+	chr4.1:43070281-43070300	MS.gene07706:intron	60.0%
!	CCGCATCTAGGGGGCATATC+CGG	+	chr4.1:43069605-43069624	MS.gene07706:CDS	60.0%
!!	GCATCGGTGACTTGTTGGCC+AGG	-	chr4.1:43070529-43070548	None:intergenic	60.0%
	AGAGAGAGAGAAGGGGGGGC+GGG	+	chr4.1:43070286-43070305	MS.gene07706:intron	65.0%
	GAGAGAGAGAGAAGGGGGGG+CGG	+	chr4.1:43070285-43070304	MS.gene07706:intron	65.0%
	AGAGAGAGAAGGGGGGGCGG+GGG	+	chr4.1:43070288-43070307	MS.gene07706:intron	70.0%
	GAGAGAGAGAAGGGGGGGCG+GGG	+	chr4.1:43070287-43070306	MS.gene07706:intron	70.0%

Chromosome	Type	Strat	End	Strand	Name
chr4.1	gene	43069463	43071176	43069463	ID=MS.gene07706
chr4.1	mRNA	43069463	43071176	43069463	ID=MS.gene07706.t1;Parent=MS.gene07706
chr4.1	exon	43069463	43070074	43069463	ID=MS.gene07706.t1.exon1;Parent=MS.gene07706.t1
chr4.1	CDS	43069463	43070074	43069463	ID=cds.MS.gene07706.t1;Parent=MS.gene07706.t1
chr4.1	exon	43070394	43070792	43070394	ID=MS.gene07706.t1.exon2;Parent=MS.gene07706.t1
chr4.1	CDS	43070394	43070792	43070394	ID=cds.MS.gene07706.t1;Parent=MS.gene07706.t1
chr4.1	exon	43071090	43071176	43071090	ID=MS.gene07706.t1.exon3;Parent=MS.gene07706.t1
chr4.1	CDS	43071090	43071176	43071090	ID=cds.MS.gene07706.t1;Parent=MS.gene07706.t1

Gene Sequence

>MS.gene07706

ATGAACCCCAATCTAATTTATAAACTGAAACTTACAGATGAAGACTATAATATAAACATCCTCTACACAGTAATTAAGGATGATCCATCCATTTTGGATAATATACATTCGAAACCGTTTGTTGAAACTCCTTTGCATATCGCCGCATCTAGGGGGCATATCCGGTTTGCCATTGAGGTTATGAATTTGAAACCTTCATTTGCTTCGAAGCTTAATTCGCAAGGTTTGAGCCCTCTCCACCTTGCTATGGAAAACAGCCAAAACAGGATGGCGCTTCGCTTTGTTGACATCAACAAAGACCTTGTTAGAATTAAAGGAAGGGGAGGCTTGACTCCTCTTCATATTGCAAGTCAAATTGGAGAGGTCGACATTTTAGCTAAATTCCTCATTGCTTGTCAGGATTCCATTGAAGATGTGACTGCGAGGGGTGAGACTGCTCTACATATTGCTGTGAAAAATAACAAGTACGAGGCTCTTGATCTTCTTGTATGCTTTCATCGAAAAAATATCAAGAGAGGTGCTAGGAAGTTAGAATATAAAATATTAAATTGGAAGGATGAGGATGACAACACCATTTTGCACATTTTAGCACAAAGGAATATCGAGCCAGAGGTAACCTTTTGTAGATATTTTTTCTAATGATAAATGTTAATATTTTAATTGTTATGTTAGCTTTTCTTCTTGTCGAAATTTGAACTTTGAATCTTCAATTTCTTAACTCTCAACTCAAACTAGTAGTCAACCACCCGAACCTTTACTATCATTTGAATCGAAGAAATATCACATAAAAAAATAGGGTTAATATATGAATACATTTTGGGAGAGAGAGAGAGAAGGGGGGGCGGGGGTTTGTTTCTTGTACACTACTATGCAGATTTTAGTTGACAATAGGAATGATATCTAACAACTGTCTTGTTGATTTCATTTCTAGGTAGCACAGGCGCTTGGATTGTTGTTAAAGACAAGGATAAATTTGAAGGGAAAAAACTTGGAGAACAAAACAGCATTAGACATGACGGCCAATGTAGATATTAGGAGTATATTGTTGAGTGCAGGTGTAAAACCTGGCCAACAAGTCACCGATGCTCCAACACTTGCATATAAACTAAGATTAAAAACCACAATTAGAGATAATAAACTGAATACTTATCTAAATCGCATTGCAAAAAATATAACAGTGGAGCAACGTAACACTTGGATGATAGTTGCGGCTCTTGTTGCAACTGCCACCTATCAATCATCATTGAGTCCCACTGGTGGAGTTTATCAAGTTAGTGCTGGTGATGACAATGATGTAGACATCGTTACTCTAGGAAATACTGGTAAATCAGTCTTGTCAGAACCTGATTTCTTGATGTTTTCATTTTTAAATCTGTCCTCCTTTTTTTTATCAACTATGGCAATATTTATTATGATGCCAAGAGGGATGGTGGGCTTTCTAGTGGCTCTTCCAATGGCTTAGTTTGCCCTTTCGTTCTTATTTTCTATGTGGAAGATATCCTCTACAGATACCAGTGCCATAGTTGTTTTCATATTTTTGAGTTTAATTCTGTTTTTTGTATTTATTTATAACATTTATTCTGTTTACTCAACATTTAAACGCATGATTGCTAAGATGTTTGAATAGATGATAGTTAAATCATTGATGCAATCGGAGAAACACCAATCAAGGTTATGGTCACCGGGTCCGGATAGATTATGGTTTGATCGCTAA

Protein sequence

>MS.gene07706.t1

MNPNLIYKLKLTDEDYNINILYTVIKDDPSILDNIHSKPFVETPLHIAASRGHIRFAIEVMNLKPSFASKLNSQGLSPLHLAMENSQNRMALRFVDINKDLVRIKGRGGLTPLHIASQIGEVDILAKFLIACQDSIEDVTARGETALHIAVKNNKYEALDLLVCFHRKNIKRGARKLEYKILNWKDEDDNTILHILAQRNIEPEVAQALGLLLKTRINLKGKNLENKTALDMTANVDIRSILLSAGVKPGQQVTDAPTLAYKLRLKTTIRDNKLNTYLNRIAKNITVEQRNTWMIVAALVATATYQSSLSPTGGVYQVSAGDDNDVDIVTLGNTGKSMIVKSLMQSEKHQSRLWSPGPDRLWFDR