AlfalfaGEDB | MS.gene51335

M. sativa cultivar XinJiangDaYe / MS.gene51335

KEGG: -
GO: GO:0003674 GO:0005488 GO:0005515
PFAM: PF12796.10 PF13857.9 PF13962.9

Nr:

Query id	Subject id	identity %	alignment length	mismatches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
MS.gene51335.t1	AES77856.1	60.6	340	128	1	1	340	1	334	3.30E-95	358.6

Swissprot:

Query id	Subject id	identity %	alignment length	mismatches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
MS.gene51335.t1	Q8GYH5	38.1	302	178	3	8	302	4	303	3.8e-15	84.0

Trembl:

Query id	Subject id	identity %	alignment length	mismatches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
MS.gene51335.t1	G7KSX2	60.6	340	128	1	1	340	1	334	2.4e-95	358.6

TFs/TRs:

Gene ID	Type	Classification

Protein Kinases:

Gene ID	Type	Classification

Network:

Co-expression Network:

Gene1	Gene2	correlation coefficient	p_value	FDR

PPI:

Gene1	Gene2	Type
MS.gene51335	MS.gene30174	PPI
MS.gene51335	MS.gene26021	PPI
MS.gene51335	MS.gene050456	PPI
MS.gene039682	MS.gene51335	PPI
MS.gene51335	MS.gene51258	PPI
MS.gene51335	MS.gene064542	PPI
MS.gene51335	MS.gene053363	PPI
MS.gene51335	MS.gene91775	PPI
MS.gene26532	MS.gene51335	PPI
MS.gene51335	MS.gene25515	PPI
MS.gene51335	MS.gene34651	PPI
MS.gene51335	MS.gene32726	PPI
MS.gene71204	MS.gene51335	PPI
MS.gene51335	MS.gene22482	PPI
MS.gene51335	MS.gene050270	PPI
MS.gene30172	MS.gene51335	PPI
MS.gene51335	MS.gene052956	PPI
MS.gene51335	MS.gene60920	PPI
MS.gene51335	MS.gene73119	PPI
MS.gene51335	MS.gene92243	PPI
MS.gene23852	MS.gene51335	PPI
MS.gene97943	MS.gene51335	PPI
MS.gene51335	MS.gene037950	PPI
MS.gene51335	MS.gene34009	PPI
MS.gene51335	MS.gene018518	PPI
MS.gene51335	MS.gene043662	PPI
MS.gene51335	MS.gene065848	PPI
MS.gene51335	MS.gene004844	PPI
MS.gene51335	MS.gene068249	PPI
MS.gene51335	MS.gene99588	PPI
MS.gene51335	MS.gene54764	PPI
MS.gene51335	MS.gene27223	PPI
MS.gene51335	MS.gene39623	PPI
MS.gene51335	MS.gene25024	PPI
MS.gene51335	MS.gene012203	PPI
MS.gene51335	MS.gene26019	PPI
MS.gene51335	MS.gene97943	PPI
MS.gene51335	MS.gene022109	PPI
MS.gene51335	MS.gene050272	PPI
MS.gene51335	MS.gene63085	PPI
MS.gene67157	MS.gene51335	PPI
MS.gene69687	MS.gene51335	PPI
MS.gene035805	MS.gene51335	PPI
MS.gene51335	MS.gene30176	PPI
MS.gene69965	MS.gene51335	PPI
MS.gene51335	MS.gene32723	PPI
MS.gene51335	MS.gene02469	PPI
MS.gene51335	MS.gene066467	PPI
MS.gene51335	MS.gene024753	PPI
MS.gene78281	MS.gene51335	PPI
MS.gene51335	MS.gene71122	PPI
MS.gene51335	MS.gene51278	PPI
MS.gene51335	MS.gene69966	PPI
MS.gene51335	MS.gene24922	PPI
MS.gene51335	MS.gene85534	PPI
MS.gene24806	MS.gene51335	PPI
MS.gene071113	MS.gene51335	PPI
MS.gene027071	MS.gene51335	PPI
MS.gene51335	MS.gene51262	PPI
MS.gene51335	MS.gene23881	PPI
MS.gene51335	MS.gene26672	PPI
MS.gene51335	MS.gene014931	PPI
MS.gene51335	MS.gene062662	PPI
MS.gene51335	MS.gene21888	PPI
MS.gene51335	MS.gene97379	PPI
MS.gene51335	MS.gene066500	PPI
MS.gene010910	MS.gene51335	PPI
MS.gene066464	MS.gene51335	PPI
MS.gene51335	MS.gene30177	PPI
MS.gene51335	MS.gene008767	PPI
MS.gene51335	MS.gene066464	PPI
MS.gene063222	MS.gene51335	PPI
MS.gene51335	MS.gene07706	PPI
MS.gene51335	MS.gene071113	PPI
MS.gene07706	MS.gene51335	PPI
MS.gene51335	MS.gene90400	PPI
MS.gene027074	MS.gene51335	PPI
MS.gene51335	MS.gene82740	PPI
MS.gene51335	MS.gene09785	PPI
MS.gene010912	MS.gene51335	PPI
MS.gene51335	MS.gene64441	PPI
MS.gene51335	MS.gene041770	PPI
MS.gene51335	MS.gene81055	PPI
MS.gene51335	MS.gene65775	PPI
MS.gene51335	MS.gene99554	PPI
MS.gene51335	MS.gene80163	PPI
MS.gene23811	MS.gene51335	PPI
MS.gene23810	MS.gene51335	PPI
MS.gene51335	MS.gene33377	PPI
MS.gene51335	MS.gene045937	PPI
MS.gene51335	MS.gene027072	PPI
MS.gene51335	MS.gene65463	PPI
MS.gene005995	MS.gene51335	PPI
MS.gene51335	MS.gene007485	PPI
MS.gene037950	MS.gene51335	PPI
MS.gene068249	MS.gene51335	PPI
MS.gene51335	MS.gene87218	PPI
MS.gene51335	MS.gene70008	PPI
MS.gene51335	MS.gene025229	PPI
MS.gene51335	MS.gene30433	PPI
MS.gene51335	MS.gene066501	PPI
MS.gene51335	MS.gene043742	PPI
MS.gene51335	MS.gene027075	PPI
MS.gene51335	MS.gene027441	PPI
MS.gene51335	MS.gene061932	PPI
MS.gene51335	MS.gene050457	PPI
MS.gene51335	MS.gene99973	PPI
MS.gene51335	MS.gene21734	PPI
MS.gene51335	MS.gene008833	PPI
MS.gene51335	MS.gene23811	PPI
MS.gene51335	MS.gene25244	PPI
MS.gene51335	MS.gene051003	PPI
MS.gene51335	MS.gene48655	PPI
MS.gene47479	MS.gene51335	PPI
MS.gene51335	MS.gene066046	PPI
MS.gene51335	MS.gene007486	PPI
MS.gene51335	MS.gene89986	PPI
MS.gene51335	MS.gene23810	PPI
MS.gene51335	MS.gene08470	PPI
MS.gene51335	MS.gene027073	PPI
MS.gene51335	MS.gene34712	PPI
MS.gene51335	MS.gene058128	PPI
MS.gene36842	MS.gene51335	PPI
MS.gene51335	MS.gene007487	PPI
MS.gene51335	MS.gene037184	PPI
MS.gene51335	MS.gene23196	PPI
MS.gene51335	MS.gene067705	PPI
MS.gene066501	MS.gene51335	PPI
MS.gene51335	MS.gene71204	PPI
MS.gene51335	MS.gene038519	PPI
MS.gene51335	MS.gene41291	PPI
MS.gene51335	MS.gene042783	PPI
MS.gene056455	MS.gene51335	PPI

Query id	Subject id	identity %	alignment length	mismatches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
MS.gene51335.t1	MTR_8g072510	77.286	339	76	1	3	341	4	341	0.0	523
MS.gene51335.t1	MTR_7g021090	72.059	340	89	1	1	340	1	334	5.31e-173	487
MS.gene51335.t1	MTR_8g039620	70.977	348	96	3	7	351	12	357	5.29e-172	486
MS.gene51335.t1	MTR_8g062410	70.940	351	72	3	3	341	4	336	4.09e-168	476
MS.gene51335.t1	MTR_1g059930	67.151	344	110	2	1	341	1	344	1.80e-161	459
MS.gene51335.t1	MTR_3g016210	66.856	353	101	3	3	340	4	355	5.16e-160	456
MS.gene51335.t1	MTR_8g068990	64.655	348	98	6	1	340	1	331	8.94e-152	435
MS.gene51335.t1	MTR_8g073260	62.500	344	120	3	1	340	1	339	3.74e-148	426
MS.gene51335.t1	MTR_7g451420	67.628	312	101	0	1	312	1	312	1.79e-146	416
MS.gene51335.t1	MTR_8g069880	63.081	344	123	4	9	351	7	347	1.38e-140	407
MS.gene51335.t1	MTR_8g040930	64.803	304	97	4	51	348	1	300	1.65e-135	391
MS.gene51335.t1	MTR_8g041240	64.803	304	97	4	51	348	1	300	1.65e-135	391
MS.gene51335.t1	MTR_8g467780	58.501	347	134	2	7	343	9	355	4.79e-131	382
MS.gene51335.t1	MTR_8g066670	61.988	342	127	3	1	341	1067	1406	1.56e-127	399
MS.gene51335.t1	MTR_3g105650	50.323	310	146	2	7	309	3	311	4.85e-102	307
MS.gene51335.t1	MTR_8g073275	44.384	365	125	8	51	348	1	354	1.27e-82	258
MS.gene51335.t1	MTR_7g099580	26.774	310	176	8	8	312	11	274	7.87e-26	106
MS.gene51335.t1	MTR_1g069110	26.254	339	217	8	9	341	18	329	1.24e-25	107
MS.gene51335.t1	MTR_2g101320	28.378	222	137	4	37	248	134	343	1.44e-20	93.6
MS.gene51335.t1	MTR_7g099570	29.302	215	138	3	1	210	1	206	2.04e-20	92.8
MS.gene51335.t1	MTR_7g117620	26.370	292	171	6	44	308	119	393	4.01e-20	92.0
MS.gene51335.t1	MTR_1g115575	26.460	291	175	6	44	309	169	445	1.15e-18	87.8
MS.gene51335.t1	MTR_2g096190	25.000	288	180	6	45	308	105	380	1.25e-17	84.3
MS.gene51335.t1	MTR_2g101310	27.572	243	152	4	40	268	137	369	1.59e-17	84.0
MS.gene51335.t1	MTR_2g101310	27.572	243	152	4	40	268	137	369	2.00e-17	84.0
MS.gene51335.t1	MTR_4g062100	25.000	288	180	6	45	308	109	384	1.24e-16	81.3
MS.gene51335.t1	MTR_6g027840	30.102	196	125	6	44	230	246	438	6.32e-16	79.3
MS.gene51335.t1	MTR_7g100390	25.000	288	181	6	44	308	87	362	1.04e-14	75.5
MS.gene51335.t1	MTR_1g032100	24.828	290	181	7	44	308	94	371	4.07e-14	73.9
MS.gene51335.t1	MTR_8g105260	24.138	290	183	6	44	308	101	378	8.57e-14	72.8
MS.gene51335.t1	MTR_7g100430	24.620	329	190	11	42	321	124	443	3.33e-13	71.2

Query id	Subject id	identity %	alignment length	mismatches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
MS.gene51335.t1	AT4G10720	41.562	320	179	2	8	319	4	323	2.31e-80	251
MS.gene51335.t1	AT4G10720	41.562	320	179	2	8	319	4	323	4.92e-80	251
MS.gene51335.t1	AT1G14500	37.898	314	186	2	8	312	4	317	8.62e-75	238
MS.gene51335.t1	AT5G15500	40.303	330	188	4	9	330	6	334	1.09e-74	238
MS.gene51335.t1	AT1G14480	38.390	323	189	2	8	320	4	326	6.22e-74	236
MS.gene51335.t1	AT5G54620	39.542	306	178	2	8	306	4	309	2.66e-70	226
MS.gene51335.t1	AT5G54610	34.983	303	188	3	8	303	4	304	1.27e-60	201
MS.gene51335.t1	AT1G14480	36.943	314	163	4	8	320	4	283	1.50e-57	192
MS.gene51335.t1	AT5G15500	35.371	229	139	4	110	330	1	228	5.76e-34	129
MS.gene51335.t1	AT5G51160	30.292	274	163	4	63	315	35	301	6.11e-32	125
MS.gene51335.t1	AT1G03670	31.429	245	119	9	88	315	266	478	5.67e-20	91.7
MS.gene51335.t1	AT1G34050	26.538	260	169	5	65	312	174	423	1.91e-19	90.1
MS.gene51335.t1	AT4G03500	28.821	229	129	6	92	309	297	502	6.72e-19	88.6
MS.gene51335.t1	AT4G03500	28.821	229	129	6	92	309	274	479	7.06e-19	88.6
MS.gene51335.t1	AT4G03500	28.821	229	129	6	92	309	274	479	7.06e-19	88.6
MS.gene51335.t1	AT4G03460	31.604	212	128	5	100	309	290	486	1.94e-18	87.0
MS.gene51335.t1	AT4G03460	31.604	212	128	5	100	309	258	454	2.20e-18	87.0
MS.gene51335.t1	AT2G01680	24.915	293	183	6	44	311	97	377	5.03e-17	82.8
MS.gene51335.t1	AT5G54700	29.515	227	120	7	95	316	17	208	1.14e-16	80.5
MS.gene51335.t1	AT1G05640	24.079	353	181	11	42	308	114	465	1.73e-15	78.2
MS.gene51335.t1	AT1G10340	28.395	243	120	6	109	312	205	432	2.66e-15	77.4
MS.gene51335.t1	AT1G10340	28.395	243	120	6	109	312	201	428	2.67e-15	77.4
MS.gene51335.t1	AT3G12360	25.085	295	174	7	44	309	167	443	4.88e-15	76.6
MS.gene51335.t1	AT3G12360	25.085	295	174	7	44	309	155	431	5.98e-15	76.6
MS.gene51335.t1	AT3G09550	24.779	339	201	10	12	321	150	463	7.62e-15	76.3
MS.gene51335.t1	AT3G09550	24.779	339	201	10	12	321	150	463	7.62e-15	76.3
MS.gene51335.t1	AT3G09550	24.779	339	201	10	12	321	157	470	8.18e-15	76.3
MS.gene51335.t1	AT5G54710	26.749	243	143	6	95	312	219	451	1.30e-14	75.5
MS.gene51335.t1	AT5G54710	26.749	243	143	6	95	312	264	496	1.48e-14	75.5
MS.gene51335.t1	AT5G54700	25.763	295	148	9	24	316	20	245	2.49e-14	74.3
MS.gene51335.t1	AT1G07710	24.768	323	207	8	9	308	70	379	4.03e-14	73.9
MS.gene51335.t1	AT1G07710	24.768	323	207	8	9	308	70	379	4.03e-14	73.9
MS.gene51335.t1	AT2G31820	25.080	311	183	10	31	308	208	501	1.46e-13	72.4
MS.gene51335.t1	AT4G03450	25.121	207	140	4	108	310	290	485	2.04e-13	72.0
MS.gene51335.t1	AT4G03450	25.121	207	140	4	108	310	290	485	2.05e-13	71.6
MS.gene51335.t1	AT5G60070	23.684	342	203	12	4	308	70	390	2.33e-13	71.6
MS.gene51335.t1	AT5G02620	23.024	291	185	6	45	308	95	373	1.26e-12	69.3
MS.gene51335.t1	AT5G02620	23.024	291	185	6	45	308	95	373	1.26e-12	69.3
MS.gene51335.t1	AT5G02620	23.024	291	185	6	45	308	95	373	1.26e-12	69.3
MS.gene51335.t1	AT5G50140	28.902	173	98	4	40	197	26	188	3.03e-12	68.2
MS.gene51335.t1	AT4G03480	23.684	342	177	12	9	330	357	634	7.98e-12	67.0
MS.gene51335.t1	AT4G03480	23.684	342	177	12	9	330	360	637	8.59e-12	67.0

Find 72 sgRNAs with CRISPR-Local

Find 94 sgRNAs with CRISPR-GE

CRISPR-Local

CRISPR-Local
sgRNA_sequence	on_target_score	Position	Region
AAAGACCTTGTTAGAGTTAA+AGG	0.117136	4.1:-50806518	MS.gene51335:CDS
GGTAAGTACTGGTATAAATT+TGG	0.243776	4.1:-50806095	MS.gene51335:CDS
GTTACATATTGCTGCATCTA+TGG	0.262404	4.1:-50806681	MS.gene51335:CDS
GGTGCTCAAAAGTTGGAAAA+TGG	0.312014	4.1:-50806296	MS.gene51335:CDS
CGGAGATGATCCATTCATTC+TGG	0.324894	4.1:-50806738	MS.gene51335:CDS
TTCATAATTTCAATGGTAAA+CGG	0.330193	4.1:+50806650	None:intergenic
TAGTGCCGAAATATGCAAAA+TGG	0.358761	4.1:+50806241	None:intergenic
TAAGGTAGAAATAGTAGAAT+TGG	0.381908	4.1:+50805742	None:intergenic
TACTAGAGAGCCTAGTATTC+CGG	0.388628	4.1:+50805610	None:intergenic
GCAGCTGAAAGCTGCAGCTC+AGG	0.395348	4.1:-50806792	MS.gene51335:CDS
TCATAATTTCAATGGTAAAC+GGG	0.395809	4.1:+50806651	None:intergenic
AATTCTACTATTTCTACCTT+AGG	0.414902	4.1:-50805740	MS.gene51335:CDS
TGTTGCCTGCTTTATCCCTC+TGG	0.417230	4.1:+50806264	None:intergenic
ATTTAAAACCTTCATTTGCT+TGG	0.418134	4.1:-50806628	MS.gene51335:CDS
GGAATTTCTCTTTCTTTGTC+CGG	0.421807	4.1:-50806435	MS.gene51335:CDS
CTTCTATTGTTGGTAAGTAC+TGG	0.432315	4.1:-50806106	MS.gene51335:CDS
ATGATACCAGCCGGAATACT+AGG	0.433021	4.1:-50805620	MS.gene51335:intron
GATCTCCTCTACGCAGTAAT+CGG	0.440555	4.1:-50806758	MS.gene51335:CDS
CCCTTCAAATACTTGTTAGC+TGG	0.445898	4.1:-50806340	MS.gene51335:CDS
ATTTCTACCTTAGGAAATGC+TGG	0.452823	4.1:-50805731	MS.gene51335:CDS
TCTATATGCTCCAGAATGAA+TGG	0.459267	4.1:+50806728	None:intergenic
AGCACAGGCACTTCTATTGT+TGG	0.470486	4.1:-50806116	MS.gene51335:intron
GTCAAGTATTCAAGGGAATC+CGG	0.474006	4.1:+50806416	None:intergenic
CTCTCTAGTAGGTTCTCCCA+TGG	0.474964	4.1:-50805597	MS.gene51335:CDS
TCGAAGAGGTGCTCAAAAGT+TGG	0.483334	4.1:-50806303	MS.gene51335:CDS
AATAATATACTCTTGATCTC+TGG	0.484204	4.1:+50806025	None:intergenic
TGTAACGGAGTTTCAACAAA+TGG	0.492054	4.1:+50806698	None:intergenic
TTTAGCTTCCAAGCAAATGA+AGG	0.492400	4.1:+50806620	None:intergenic
TAGTAGGTTCTCCCATGGGT+TGG	0.493109	4.1:-50805592	MS.gene51335:CDS
GCCAGCTAACAAGTATTTGA+AGG	0.497511	4.1:+50806339	None:intergenic
TGCTTGGAAGCTAAATCCGC+AGG	0.508838	4.1:-50806612	MS.gene51335:CDS
TGTTAAGAATCAACAATATG+AGG	0.510561	4.1:-50806363	MS.gene51335:CDS
ACCTCACAGTCAAGTATTCA+AGG	0.520683	4.1:+50806408	None:intergenic
AAGAGTATATTATTAAGTGT+TGG	0.527914	4.1:-50806016	MS.gene51335:CDS
GTTAGAGTTAAAGGAAGAGA+GGG	0.531201	4.1:-50806509	MS.gene51335:CDS
TTACATATTGCTGCATCTAT+GGG	0.532476	4.1:-50806680	MS.gene51335:CDS
GTTCACGCCATTGTCATCAC+TGG	0.534262	4.1:+50805775	None:intergenic
TGTTAGAGTTAAAGGAAGAG+AGG	0.542155	4.1:-50806510	MS.gene51335:CDS
CAGAGGAGCAACGCAACACT+TGG	0.546199	4.1:-50805877	MS.gene51335:CDS
GGAATACTAGGCTCTCTAGT+AGG	0.546860	4.1:-50805608	MS.gene51335:CDS
GCAACTGCGATCTATCAATC+CGG	0.547636	4.1:-50805833	MS.gene51335:CDS
GCACACGGGCACAAAGGCTC+AGG	0.547763	4.1:-50805961	MS.gene51335:CDS
GGTAGAAATAGTAGAATTGG+CGG	0.549214	4.1:+50805745	None:intergenic
CTGAAAGCTGCAGCTCAGGA+AGG	0.558773	4.1:-50806788	MS.gene51335:CDS
CTCTTCCTTTAACTCTAACA+AGG	0.564990	4.1:+50806513	None:intergenic
GGCACTAAATAGTGAGCCGC+AGG	0.567544	4.1:-50806225	MS.gene51335:intron
TCTCTAGTAGGTTCTCCCAT+GGG	0.580455	4.1:-50805596	MS.gene51335:CDS
AAATGGAATATTAAACCAGA+GGG	0.585975	4.1:-50806279	MS.gene51335:CDS
CTAACCTGATAAATTCCACC+AGG	0.592230	4.1:+50805800	None:intergenic
AAATTTGGACGCAAAGAATG+AGG	0.593661	4.1:-50806080	MS.gene51335:CDS
CCAGCTAACAAGTATTTGAA+GGG	0.614265	4.1:+50806340	None:intergenic
CCCTTGAATACTTGACTGTG+AGG	0.615568	4.1:-50806409	MS.gene51335:CDS
TTAAACCAGAGGGATAAAGC+AGG	0.617620	4.1:-50806269	MS.gene51335:CDS
GAATCAGTGACTTCTAAGCT+CGG	0.618191	4.1:+50805986	None:intergenic
ACTAGCGGCAAACCAACCCA+TGG	0.623120	4.1:+50805580	None:intergenic
ATTCTCGCACACGGGCACAA+AGG	0.624210	4.1:-50805967	MS.gene51335:CDS
AAGTCACTGATTCTCGCACA+CGG	0.625915	4.1:-50805976	MS.gene51335:CDS
CCTCACAGTCAAGTATTCAA+GGG	0.642621	4.1:+50806409	None:intergenic
CTCAAACGAAATAATCGAAG+AGG	0.644802	4.1:-50806317	MS.gene51335:CDS
ATAGATGCAGCAATATGTAA+CGG	0.652232	4.1:+50806683	None:intergenic
GCTTGGAAGCTAAATCCGCA+GGG	0.653006	4.1:-50806611	MS.gene51335:CDS
AAAATGGAATATTAAACCAG+AGG	0.659194	4.1:-50806280	MS.gene51335:CDS
AGTCACTGATTCTCGCACAC+GGG	0.663891	4.1:-50805975	MS.gene51335:CDS
CATCTCCGATTACTGCGTAG+AGG	0.674210	4.1:+50806753	None:intergenic
CTAGCGGCAAACCAACCCAT+GGG	0.674900	4.1:+50805581	None:intergenic
AGTGCTTGCTATGTCTAATG+CGG	0.681177	4.1:+50806048	None:intergenic
GTTAGTGCCAGTGATGACAA+TGG	0.683840	4.1:-50805782	MS.gene51335:CDS
AACCTGATAAATTCCACCAG+GGG	0.693447	4.1:+50805802	None:intergenic
TAACCTGATAAATTCCACCA+GGG	0.695982	4.1:+50805801	None:intergenic
ACCTGATAAATTCCACCAGG+GGG	0.706697	4.1:+50805803	None:intergenic
CATTAGAAGTAATATAACAG+AGG	0.709657	4.1:-50805894	MS.gene51335:CDS
TGAATGGGACTGAATCCCTG+CGG	0.749640	4.1:+50806596	None:intergenic

CRISPR-GE

badsite warning	sgRNA_sequence	Strand	Position	Region	GC_content
!!!	TTATTTGTTAATTAATTTCT+TGG	-	chr4.1:50806253-50806272	MS.gene51335:CDS	10.0%
!!!	TTTTAAATTCATAATTTCAA+TGG	+	chr4.1:50805753-50805772	None:intergenic	10.0%
!!	AGAAATCAAGAAAGATATAA+AGG	+	chr4.1:50806226-50806245	None:intergenic	20.0%
!!	TTCATAATTTCAATGGTAAA+CGG	+	chr4.1:50805746-50805765	None:intergenic	20.0%
!!!	AAGAGTATATTATTAAGTGT+TGG	-	chr4.1:50806377-50806396	MS.gene51335:CDS	20.0%
!!!	AGAAAGACACTATATATTTT+TGG	+	chr4.1:50805841-50805860	None:intergenic	20.0%
!	AAAATGGAATATTAAACCAG+AGG	-	chr4.1:50806113-50806132	MS.gene51335:intron	25.0%
!	AAATGGAATATTAAACCAGA+GGG	-	chr4.1:50806114-50806133	MS.gene51335:intron	25.0%
!	AATAATATACTCTTGATCTC+TGG	+	chr4.1:50806371-50806390	None:intergenic	25.0%
!	CATTAGAAGTAATATAACAG+AGG	-	chr4.1:50806499-50806518	MS.gene51335:CDS	25.0%
!	CGCTAAAATTGATACAAAAA+AGG	+	chr4.1:50806744-50806763	None:intergenic	25.0%
!	TAAGGTAGAAATAGTAGAAT+TGG	+	chr4.1:50806654-50806673	None:intergenic	25.0%
!	TCATAATTTCAATGGTAAAC+GGG	+	chr4.1:50805745-50805764	None:intergenic	25.0%
!	TGTTAAGAATCAACAATATG+AGG	-	chr4.1:50806030-50806049	MS.gene51335:CDS	25.0%
!	TTATTGAATAAGATTACCTG+CGG	+	chr4.1:50806187-50806206	None:intergenic	25.0%
!!	ATTTAAAACCTTCATTTGCT+TGG	-	chr4.1:50805765-50805784	MS.gene51335:CDS	25.0%
!!	TGACATAATAGTTCTTTTTG+AGG	+	chr4.1:50806465-50806484	None:intergenic	25.0%
!!!	AATTCTACTATTTCTACCTT+AGG	-	chr4.1:50806653-50806672	MS.gene51335:CDS	25.0%
	AAAGACCTTGTTAGAGTTAA+AGG	-	chr4.1:50805875-50805894	MS.gene51335:CDS	30.0%
	ATAGATGCAGCAATATGTAA+CGG	+	chr4.1:50805713-50805732	None:intergenic	30.0%
	ATATATGTTATGATACCAGC+CGG	-	chr4.1:50806764-50806783	MS.gene51335:CDS	30.0%
	TTACATATTGCTGCATCTAT+GGG	-	chr4.1:50805713-50805732	MS.gene51335:intron	30.0%
!	AATTAATTTCTTGGTAGCAC+AGG	-	chr4.1:50806262-50806281	MS.gene51335:CDS	30.0%
!	CAACACCATTTTGCATATTT+CGG	-	chr4.1:50806147-50806166	MS.gene51335:intron	30.0%
!	CTTCATTTTGCAAGTCAAAA+TGG	-	chr4.1:50805917-50805936	MS.gene51335:CDS	30.0%
!!	GGTAAGTACTGGTATAAATT+TGG	-	chr4.1:50806298-50806317	MS.gene51335:CDS	30.0%
!!!	TTTTGACTTGCAAAATGAAG+AGG	+	chr4.1:50805917-50805936	None:intergenic	30.0%
	AAATTTGGACGCAAAGAATG+AGG	-	chr4.1:50806313-50806332	MS.gene51335:CDS	35.0%
	ATTTCTACCTTAGGAAATGC+TGG	-	chr4.1:50806662-50806681	MS.gene51335:CDS	35.0%
	CCAGCTAACAAGTATTTGAA+GGG	+	chr4.1:50806056-50806075	None:intergenic	35.0%
	CTCAAACGAAATAATCGAAG+AGG	-	chr4.1:50806076-50806095	MS.gene51335:CDS	35.0%
	CTCTTCCTTTAACTCTAACA+AGG	+	chr4.1:50805883-50805902	None:intergenic	35.0%
	GGAATTTCTCTTTCTTTGTC+CGG	-	chr4.1:50805958-50805977	MS.gene51335:CDS	35.0%
	GGTAGAAATAGTAGAATTGG+CGG	+	chr4.1:50806651-50806670	None:intergenic	35.0%
	GTTACATATTGCTGCATCTA+TGG	-	chr4.1:50805712-50805731	MS.gene51335:intron	35.0%
	GTTAGAGTTAAAGGAAGAGA+GGG	-	chr4.1:50805884-50805903	MS.gene51335:CDS	35.0%
	TAACCTGATAAATTCCACCA+GGG	+	chr4.1:50806595-50806614	None:intergenic	35.0%
	TCTATATGCTCCAGAATGAA+TGG	+	chr4.1:50805668-50805687	None:intergenic	35.0%
	TGTTAGAGTTAAAGGAAGAG+AGG	-	chr4.1:50805883-50805902	MS.gene51335:CDS	35.0%
!	CTTCTATTGTTGGTAAGTAC+TGG	-	chr4.1:50806287-50806306	MS.gene51335:CDS	35.0%
!	TAGTGCCGAAATATGCAAAA+TGG	+	chr4.1:50806155-50806174	None:intergenic	35.0%
!	TGATTTTCCAGCATTTCCTA+AGG	+	chr4.1:50806672-50806691	None:intergenic	35.0%
!	TGTAACGGAGTTTCAACAAA+TGG	+	chr4.1:50805698-50805717	None:intergenic	35.0%
!	TTTAGCTTCCAAGCAAATGA+AGG	+	chr4.1:50805776-50805795	None:intergenic	35.0%
!	TTTTGCATAGCGAGATGAAT+GGG	+	chr4.1:50805815-50805834	None:intergenic	35.0%
	AACCTGATAAATTCCACCAG+GGG	+	chr4.1:50806594-50806613	None:intergenic	40.0%
	ACCTCACAGTCAAGTATTCA+AGG	+	chr4.1:50805988-50806007	None:intergenic	40.0%
	CCTCACAGTCAAGTATTCAA+GGG	+	chr4.1:50805987-50806006	None:intergenic	40.0%
	CTAACCTGATAAATTCCACC+AGG	+	chr4.1:50806596-50806615	None:intergenic	40.0%
	GAATCAGTGACTTCTAAGCT+CGG	+	chr4.1:50806410-50806429	None:intergenic	40.0%
	GCCAGCTAACAAGTATTTGA+AGG	+	chr4.1:50806057-50806076	None:intergenic	40.0%
	GGTGCTCAAAAGTTGGAAAA+TGG	-	chr4.1:50806097-50806116	MS.gene51335:CDS	40.0%
	GTCAAGTATTCAAGGGAATC+CGG	+	chr4.1:50805980-50805999	None:intergenic	40.0%
	TACTAGAGAGCCTAGTATTC+CGG	+	chr4.1:50806786-50806805	None:intergenic	40.0%
	TTAAACCAGAGGGATAAAGC+AGG	-	chr4.1:50806124-50806143	MS.gene51335:intron	40.0%
!	CCCTTCAAATACTTGTTAGC+TGG	-	chr4.1:50806053-50806072	MS.gene51335:CDS	40.0%
!	GTTTTGCATAGCGAGATGAA+TGG	+	chr4.1:50805816-50805835	None:intergenic	40.0%
!	TTTTGCAAGTCAAAATGGCG+AGG	-	chr4.1:50805922-50805941	MS.gene51335:CDS	40.0%
!!	AGTGCTTGCTATGTCTAATG+CGG	+	chr4.1:50806348-50806367	None:intergenic	40.0%
!!	GCTGGAAAATCAGTTTTGTC+AGG	-	chr4.1:50806680-50806699	MS.gene51335:CDS	40.0%
!!	TGGCGAGGTTGAATTTTTAG+CGG	-	chr4.1:50805937-50805956	MS.gene51335:CDS	40.0%
	ACCTGATAAATTCCACCAGG+GGG	+	chr4.1:50806593-50806612	None:intergenic	45.0%
	AGCACAGGCACTTCTATTGT+TGG	-	chr4.1:50806277-50806296	MS.gene51335:CDS	45.0%
	ATGATACCAGCCGGAATACT+AGG	-	chr4.1:50806773-50806792	MS.gene51335:CDS	45.0%
	CCCTTGAATACTTGACTGTG+AGG	-	chr4.1:50805984-50806003	MS.gene51335:CDS	45.0%
	CGGAGATGATCCATTCATTC+TGG	-	chr4.1:50805655-50805674	MS.gene51335:intron	45.0%
	GATCTCCTCTACGCAGTAAT+CGG	-	chr4.1:50805635-50805654	MS.gene51335:intron	45.0%
	GCAACTGCGATCTATCAATC+CGG	-	chr4.1:50806560-50806579	MS.gene51335:CDS	45.0%
	GGAATACTAGGCTCTCTAGT+AGG	-	chr4.1:50806785-50806804	MS.gene51335:CDS	45.0%
	GTTAGTGCCAGTGATGACAA+TGG	-	chr4.1:50806611-50806630	MS.gene51335:CDS	45.0%
	TCTCTAGTAGGTTCTCCCAT+GGG	-	chr4.1:50806797-50806816	MS.gene51335:CDS	45.0%
!!	AAGTCACTGATTCTCGCACA+CGG	-	chr4.1:50806417-50806436	MS.gene51335:CDS	45.0%
!!	TCGAAGAGGTGCTCAAAAGT+TGG	-	chr4.1:50806090-50806109	MS.gene51335:CDS	45.0%
	CATCTCCGATTACTGCGTAG+AGG	+	chr4.1:50805643-50805662	None:intergenic	50.0%
	CTCTCTAGTAGGTTCTCCCA+TGG	-	chr4.1:50806796-50806815	MS.gene51335:CDS	50.0%
	GCTTGGAAGCTAAATCCGCA+GGG	-	chr4.1:50805782-50805801	MS.gene51335:CDS	50.0%
	GTTCACGCCATTGTCATCAC+TGG	+	chr4.1:50806621-50806640	None:intergenic	50.0%
	TAGTAGGTTCTCCCATGGGT+TGG	-	chr4.1:50806801-50806820	MS.gene51335:CDS	50.0%
	TCCCCCTGGTGGAATTTATC+AGG	-	chr4.1:50806589-50806608	MS.gene51335:CDS	50.0%
	TGAATGGGACTGAATCCCTG+CGG	+	chr4.1:50805800-50805819	None:intergenic	50.0%
	TGCTTGGAAGCTAAATCCGC+AGG	-	chr4.1:50805781-50805800	MS.gene51335:CDS	50.0%
	TGTTGCCTGCTTTATCCCTC+TGG	+	chr4.1:50806132-50806151	None:intergenic	50.0%
!!	AGTCACTGATTCTCGCACAC+GGG	-	chr4.1:50806418-50806437	MS.gene51335:CDS	50.0%
	AGAGAGCCTAGTATTCCGGC+TGG	+	chr4.1:50806782-50806801	None:intergenic	55.0%
	ATTCTCGCACACGGGCACAA+AGG	-	chr4.1:50806426-50806445	MS.gene51335:CDS	55.0%
	CAGAGGAGCAACGCAACACT+TGG	-	chr4.1:50806516-50806535	MS.gene51335:CDS	55.0%
	CTAGCGGCAAACCAACCCAT+GGG	+	chr4.1:50806815-50806834	None:intergenic	55.0%
	CTGAAAGCTGCAGCTCAGGA+AGG	-	chr4.1:50805605-50805624	MS.gene51335:CDS	55.0%
	GGCACTAAATAGTGAGCCGC+AGG	-	chr4.1:50806168-50806187	MS.gene51335:intron	55.0%
	CAATCCGGATTGAGTCCCCC+TGG	-	chr4.1:50806575-50806594	MS.gene51335:CDS	60.0%
	GCAGCTGAAAGCTGCAGCTC+AGG	-	chr4.1:50805601-50805620	MS.gene51335:CDS	60.0%
	TCCACCAGGGGGACTCAATC+CGG	+	chr4.1:50806582-50806601	None:intergenic	60.0%
	GCACACGGGCACAAAGGCTC+AGG	-	chr4.1:50806432-50806451	MS.gene51335:CDS	65.0%
	TCCGGATTGAGTCCCCCTGG+TGG	-	chr4.1:50806578-50806597	MS.gene51335:CDS	65.0%

Chromosome	Type	Strat	End	Strand	Name
chr4.1	gene	50805581	50806834	50805581	ID=MS.gene51335
chr4.1	mRNA	50805581	50806834	50805581	ID=MS.gene51335.t1;Parent=MS.gene51335
chr4.1	exon	50806226	50806834	50806226	ID=MS.gene51335.t1.exon1;Parent=MS.gene51335.t1
chr4.1	CDS	50806226	50806834	50806226	ID=cds.MS.gene51335.t1;Parent=MS.gene51335.t1
chr4.1	exon	50805719	50806131	50805719	ID=MS.gene51335.t1.exon2;Parent=MS.gene51335.t1
chr4.1	CDS	50805719	50806131	50805719	ID=cds.MS.gene51335.t1;Parent=MS.gene51335.t1
chr4.1	exon	50805581	50805632	50805581	ID=MS.gene51335.t1.exon3;Parent=MS.gene51335.t1
chr4.1	CDS	50805581	50805632	50805581	ID=cds.MS.gene51335.t1;Parent=MS.gene51335.t1

Gene Sequence

>MS.gene51335

ATGAACACAAATATTTGTGAGCAGCTGAAAGCTGCAGCTCAGGAAGGTGATATAGATCTCCTCTACGCAGTAATCGGAGATGATCCATTCATTCTGGAGCATATAGATTTGATACCATTTGTTGAAACTCCGTTACATATTGCTGCATCTATGGGTCATATCCCGTTTACCATTGAAATTATGAATTTAAAACCTTCATTTGCTTGGAAGCTAAATCCGCAGGGATTCAGTCCCATTCATCTCGCTATGCAAAACGACCAAAAATATATAGTGTCTTTCTTTGTGCACAACAATAAAGACCTTGTTAGAGTTAAAGGAAGAGAGGGTTTAACTCCTCTTCATTTTGCAAGTCAAAATGGCGAGGTTGAATTTTTAGCGGAATTTCTCTTTCTTTGTCCGGATTCCCTTGAATACTTGACTGTGAGGTGCGAGACTGCACTGCATATTGCTGTTAAGAATCAACAATATGAGGCCCTTCAAATACTTGTTAGCTGGCTCAAACGAAATAATCGAAGAGGTGCTCAAAAGTTGGAAAATGGAATATTAAACCAGAGGGATAAAGCAGGCAACACCATTTTGCATATTTCGGCACTAAATAGTGAGCCGCAGGTAATCTTATTCAATAACTAAAATCACATGTCTCCTTTATATCTTTCTTGATTTCTTGTATTGTTATTTGTTAATTAATTTCTTGGTAGCACAGGCACTTCTATTGTTGGTAAGTACTGGTATAAATTTGGACGCAAAGAATGAGGAGAACAAAACCGCATTAGACATAGCAAGCACTCCAGAGATCAAGAGTATATTATTAAGTGTTGGAGCAAAACCGAGCTTAGAAGTCACTGATTCTCGCACACGGGCACAAAGGCTCAGGTCAAAGACCTCAAAAAGAACTATTATGTCAACTTATGTAAATCGCATTAGAAGTAATATAACAGAGGAGCAACGCAACACTTGGTTGATAGTTTCAACTCTTGTTGCAACTGCGATCTATCAATCCGGATTGAGTCCCCCTGGTGGAATTTATCAGGTTAGTGCCAGTGATGACAATGGCGTGAACAACACTTCCGCCAATTCTACTATTTCTACCTTAGGAAATGCTGGAAAATCAGTTTTGTCAGGATACGAATTCTTTTTGTTTTTATTTATAAATATGTATTCCTTTTTTGTATCAATTTTAGCGATATATGTTATGATACCAGCCGGAATACTAGGCTCTCTAGTAGGTTCTCCCATGGGTTGGTTTGCCGCTAG

Protein sequence

>MS.gene51335.t1

MNTNICEQLKAAAQEGDIDLLYAVIGDDPFILEHIDLIPFVETPLHIAASMGHIPFTIEIMNLKPSFAWKLNPQGFSPIHLAMQNDQKYIVSFFVHNNKDLVRVKGREGLTPLHFASQNGEVEFLAEFLFLCPDSLEYLTVRCETALHIAVKNQQYEALQILVSWLKRNNRRGAQKLENGILNQRDKAGNTILHISALNSEPQALLLLVSTGINLDAKNEENKTALDIASTPEIKSILLSVGAKPSLEVTDSRTRAQRLRSKTSKRTIMSTYVNRIRSNITEEQRNTWLIVSTLVATAIYQSGLSPPGGIYQVSASDDNGVNNTSANSTISTLGNAGKSVFRNTRLSSRFSHGLVCR