AlfalfaGEDB | MS.gene23810

M. sativa cultivar XinJiangDaYe / MS.gene23810

KEGG: -
GO: GO:0003674 GO:0005488 GO:0005515
PFAM: PF12796.10

Nr:

Query id	Subject id	identity %	alignment length	mismatches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
MS.gene23810.t1	RHN41843.1	65.7	332	45	2	1	263	1	332	1.40E-61	246.5

Swissprot:

Query id	Subject id	identity %	alignment length	mismatches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
MS.gene23810.t1	Q8GYH5	50.0	224	109	2	6	228	2	223	4.0e-12	73.6

Trembl:

Query id	Subject id	identity %	alignment length	mismatches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
MS.gene23810.t1	G7L8Q1	65.7	332	45	2	1	263	1	332	1.0e-61	246.5

TFs/TRs:

Gene ID	Type	Classification

Protein Kinases:

Gene ID	Type	Classification

Network:

Co-expression Network:

Gene1	Gene2	correlation coefficient	p_value	FDR

PPI:

Gene1	Gene2	Type
MS.gene23810	MS.gene050272	PPI
MS.gene23810	MS.gene63085	PPI
MS.gene23810	MS.gene26021	PPI
MS.gene23810	MS.gene050456	PPI
MS.gene23810	MS.gene51258	PPI
MS.gene23810	MS.gene32723	PPI
MS.gene039682	MS.gene23810	PPI
MS.gene23810	MS.gene053363	PPI
MS.gene23810	MS.gene066467	PPI
MS.gene26532	MS.gene23810	PPI
MS.gene23810	MS.gene34651	PPI
MS.gene47479	MS.gene23810	PPI
MS.gene23810	MS.gene32726	PPI
MS.gene23810	MS.gene71122	PPI
MS.gene23810	MS.gene22482	PPI
MS.gene23810	MS.gene24922	PPI
MS.gene71204	MS.gene23810	PPI
MS.gene23810	MS.gene052956	PPI
MS.gene23810	MS.gene60920	PPI
MS.gene23810	MS.gene73119	PPI
MS.gene23810	MS.gene92243	PPI
MS.gene23810	MS.gene037950	PPI
MS.gene23810	MS.gene34009	PPI
MS.gene23810	MS.gene51262	PPI
MS.gene23810	MS.gene26672	PPI
MS.gene23810	MS.gene043662	PPI
MS.gene36842	MS.gene23810	PPI
MS.gene23810	MS.gene014931	PPI
MS.gene23810	MS.gene21888	PPI
MS.gene23810	MS.gene066500	PPI
MS.gene066501	MS.gene23810	PPI
MS.gene23810	MS.gene39623	PPI
MS.gene23810	MS.gene066464	PPI
MS.gene056455	MS.gene23810	PPI
MS.gene23810	MS.gene07706	PPI
MS.gene23810	MS.gene25024	PPI
MS.gene23810	MS.gene012203	PPI
MS.gene23810	MS.gene26019	PPI
MS.gene23810	MS.gene022109	PPI
MS.gene035805	MS.gene23810	PPI
MS.gene23810	MS.gene30176	PPI
MS.gene23810	MS.gene041770	PPI
MS.gene23810	MS.gene81055	PPI
MS.gene23810	MS.gene65775	PPI
MS.gene23810	MS.gene99554	PPI
MS.gene23810	MS.gene80163	PPI
MS.gene69965	MS.gene23810	PPI
MS.gene23810	MS.gene02469	PPI
MS.gene23810	MS.gene33377	PPI
MS.gene23810	MS.gene024753	PPI
MS.gene23810	MS.gene045937	PPI
MS.gene23810	MS.gene51278	PPI
MS.gene23810	MS.gene69966	PPI
MS.gene23810	MS.gene87218	PPI
MS.gene30172	MS.gene23810	PPI
MS.gene23810	MS.gene85534	PPI
MS.gene23852	MS.gene23810	PPI
MS.gene97943	MS.gene23810	PPI
MS.gene071113	MS.gene23810	PPI
MS.gene23810	MS.gene23881	PPI
MS.gene027071	MS.gene23810	PPI
MS.gene67157	MS.gene23810	PPI
MS.gene23810	MS.gene066501	PPI
MS.gene23810	MS.gene062662	PPI
MS.gene23810	MS.gene97379	PPI
MS.gene23810	MS.gene21734	PPI
MS.gene23810	MS.gene30177	PPI
MS.gene23810	MS.gene70008	PPI
MS.gene010910	MS.gene23810	PPI
MS.gene23810	MS.gene008767	PPI
MS.gene23810	MS.gene008833	PPI
MS.gene23810	MS.gene23811	PPI
MS.gene23810	MS.gene071113	PPI
MS.gene23810	MS.gene90400	PPI
MS.gene063222	MS.gene23810	PPI
MS.gene23810	MS.gene25244	PPI
MS.gene07706	MS.gene23810	PPI
MS.gene027074	MS.gene23810	PPI
MS.gene23810	MS.gene82740	PPI
MS.gene23810	MS.gene48655	PPI
MS.gene69687	MS.gene23810	PPI
MS.gene23810	MS.gene09785	PPI
MS.gene23810	MS.gene64441	PPI
MS.gene23810	MS.gene066046	PPI
MS.gene23810	MS.gene007486	PPI
MS.gene23811	MS.gene23810	PPI
MS.gene23810	MS.gene51335	PPI
MS.gene23810	MS.gene027073	PPI
MS.gene23810	MS.gene027072	PPI
MS.gene23810	MS.gene65463	PPI
MS.gene23810	MS.gene007485	PPI
MS.gene78281	MS.gene23810	PPI
MS.gene005995	MS.gene23810	PPI
MS.gene037950	MS.gene23810	PPI
MS.gene23810	MS.gene23196	PPI
MS.gene23810	MS.gene067705	PPI
MS.gene23810	MS.gene71204	PPI
MS.gene24806	MS.gene23810	PPI
MS.gene23810	MS.gene025229	PPI
MS.gene23810	MS.gene30433	PPI
MS.gene23810	MS.gene043742	PPI
MS.gene23810	MS.gene027075	PPI
MS.gene23810	MS.gene027441	PPI
MS.gene23810	MS.gene061932	PPI
MS.gene23810	MS.gene050457	PPI
MS.gene23810	MS.gene99973	PPI
MS.gene23810	MS.gene30174	PPI
MS.gene066464	MS.gene23810	PPI
MS.gene23810	MS.gene064542	PPI
MS.gene23810	MS.gene91775	PPI
MS.gene23810	MS.gene051003	PPI
MS.gene23810	MS.gene25515	PPI
MS.gene010912	MS.gene23810	PPI
MS.gene23810	MS.gene89986	PPI
MS.gene23810	MS.gene050270	PPI
MS.gene23810	MS.gene08470	PPI
MS.gene23810	MS.gene34712	PPI
MS.gene51335	MS.gene23810	PPI
MS.gene23810	MS.gene058128	PPI
MS.gene23810	MS.gene018518	PPI
MS.gene23810	MS.gene007487	PPI
MS.gene23810	MS.gene065848	PPI
MS.gene23810	MS.gene037184	PPI
MS.gene23810	MS.gene004844	PPI
MS.gene068249	MS.gene23810	PPI
MS.gene23810	MS.gene068249	PPI
MS.gene23810	MS.gene99588	PPI
MS.gene23810	MS.gene54764	PPI
MS.gene23810	MS.gene038519	PPI
MS.gene23810	MS.gene41291	PPI
MS.gene23810	MS.gene27223	PPI
MS.gene23810	MS.gene042783	PPI
MS.gene23810	MS.gene97943	PPI

Query id	Subject id	identity %	alignment length	mismatches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
MS.gene23810.t1	MTR_8g073260	84.016	244	37	1	1	242	1	244	4.88e-149	424
MS.gene23810.t1	MTR_3g016210	59.310	290	99	4	1	274	1	287	3.02e-114	336
MS.gene23810.t1	MTR_1g059930	68.398	231	73	0	7	237	10	240	7.16e-114	335
MS.gene23810.t1	MTR_8g039620	68.240	233	74	0	5	237	10	242	9.51e-113	332
MS.gene23810.t1	MTR_7g021090	57.818	275	104	2	1	275	1	263	1.63e-109	323
MS.gene23810.t1	MTR_8g072510	60.526	266	98	2	1	259	1	266	5.68e-108	320
MS.gene23810.t1	MTR_7g451420	64.050	242	87	0	1	242	1	242	1.20e-105	310
MS.gene23810.t1	MTR_8g062410	64.435	239	83	2	1	237	1	239	2.04e-102	306
MS.gene23810.t1	MTR_3g105650	63.229	223	82	0	6	228	2	224	6.48e-98	293
MS.gene23810.t1	MTR_8g068990	62.009	229	71	2	12	237	15	230	2.69e-94	285
MS.gene23810.t1	MTR_8g073275	60.392	255	30	4	51	242	1	247	7.50e-92	279
MS.gene23810.t1	MTR_8g073275	87.879	33	4	0	240	272	310	342	2.91e-11	63.5
MS.gene23810.t1	MTR_8g069880	59.414	239	96	1	5	242	3	241	2.09e-90	276
MS.gene23810.t1	MTR_8g467780	57.143	245	95	1	12	246	14	258	2.74e-88	270
MS.gene23810.t1	MTR_8g066670	61.864	236	89	1	1	235	1067	1302	7.42e-88	285
MS.gene23810.t1	MTR_8g040930	63.684	190	66	1	51	237	1	190	5.78e-81	249
MS.gene23810.t1	MTR_8g041240	63.684	190	66	1	51	237	1	190	5.78e-81	249
MS.gene23810.t1	MTR_7g099580	28.309	272	153	9	12	249	15	278	1.99e-22	95.1
MS.gene23810.t1	MTR_2g101320	29.744	195	122	3	37	228	134	316	3.57e-19	87.4
MS.gene23810.t1	MTR_1g069110	30.488	164	108	2	6	163	12	175	1.27e-18	85.5
MS.gene23810.t1	MTR_7g099570	26.407	231	148	4	12	237	12	225	2.53e-18	84.7
MS.gene23810.t1	MTR_2g101310	28.788	198	122	3	40	232	137	320	3.26e-15	75.5
MS.gene23810.t1	MTR_2g101310	28.866	194	119	3	40	228	137	316	5.75e-15	75.1
MS.gene23810.t1	MTR_2g096190	26.630	184	132	2	7	190	103	283	1.36e-14	73.9
MS.gene23810.t1	MTR_7g117620	28.155	206	129	4	31	229	100	293	7.33e-14	71.6
MS.gene23810.t1	MTR_4g062100	26.994	163	117	1	7	169	107	267	8.67e-14	71.2
MS.gene23810.t1	MTR_1g115575	25.668	187	126	2	44	229	169	343	4.38e-12	66.2
MS.gene23810.t1	MTR_7g100430	24.453	274	162	8	5	234	68	340	7.70e-12	65.5

Query id	Subject id	identity %	alignment length	mismatches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
MS.gene23810.t1	AT4G10720	49.107	224	113	1	6	228	2	225	9.80e-70	221
MS.gene23810.t1	AT4G10720	49.107	224	113	1	6	228	2	225	2.20e-69	221
MS.gene23810.t1	AT5G54620	45.133	226	119	3	6	228	2	225	1.71e-61	200
MS.gene23810.t1	AT1G14480	45.536	224	121	1	6	228	2	225	6.59e-61	199
MS.gene23810.t1	AT5G54610	42.857	224	125	2	6	228	2	223	2.00e-60	197
MS.gene23810.t1	AT1G14500	43.750	224	125	1	6	228	2	225	6.20e-60	196
MS.gene23810.t1	AT5G15500	46.188	223	115	2	12	229	9	231	1.28e-58	193
MS.gene23810.t1	AT1G14480	49.045	157	80	0	6	162	2	158	2.18e-45	157
MS.gene23810.t1	AT5G51160	33.898	177	100	4	59	228	33	199	8.25e-23	97.4
MS.gene23810.t1	AT5G15500	39.200	125	71	2	110	229	1	125	1.67e-18	84.3
MS.gene23810.t1	AT5G02620	27.041	196	130	2	45	239	95	278	2.35e-14	73.2
MS.gene23810.t1	AT5G02620	27.041	196	130	2	45	239	95	278	2.35e-14	73.2
MS.gene23810.t1	AT5G02620	27.041	196	130	2	45	239	95	278	2.35e-14	73.2
MS.gene23810.t1	AT5G50140	27.805	205	122	5	40	228	26	220	6.31e-14	72.0
MS.gene23810.t1	AT5G60070	28.481	158	110	2	7	163	110	265	3.28e-13	69.7
MS.gene23810.t1	AT5G54700	26.894	264	137	7	24	259	20	255	1.77e-12	67.4
MS.gene23810.t1	AT2G01680	27.273	187	123	2	44	229	97	271	2.32e-12	67.0
MS.gene23810.t1	AT3G09550	25.112	223	145	5	12	229	150	355	3.89e-12	66.6
MS.gene23810.t1	AT3G09550	25.112	223	145	5	12	229	150	355	3.89e-12	66.6
MS.gene23810.t1	AT3G09550	25.112	223	145	5	12	229	157	362	3.98e-12	66.6
MS.gene23810.t1	AT1G07710	25.543	184	134	2	7	190	103	283	3.61e-11	63.5
MS.gene23810.t1	AT1G07710	25.543	184	134	2	7	190	103	283	3.61e-11	63.5
MS.gene23810.t1	AT1G10340	24.014	279	138	7	5	219	37	305	5.31e-11	63.2

Find 58 sgRNAs with CRISPR-Local

Find 146 sgRNAs with CRISPR-GE

CRISPR-Local

CRISPR-Local
sgRNA_sequence	on_target_score	Position	Region
CAAGGTCAATTTCTCCATTT+TGG	0.130242	8.4:-30954089	None:intergenic
AAGGAACTTGTTAGAATTAA+AGG	0.165742	8.4:+30954033	MS.gene23810:CDS
CTTCATATTGCTTGCCAAAA+TGG	0.216347	8.4:+30954075	MS.gene23810:CDS
GTAACATCTTCAATAGAATT+TGG	0.238255	8.4:-30954135	None:intergenic
TGAGGAGGATCCATATGTTT+TGG	0.280435	8.4:+30953813	MS.gene23810:CDS
TCGATTTGTAGACATGAATA+AGG	0.306644	8.4:+30954014	MS.gene23810:CDS
ATCGAAGCACAATACTCTTT+TGG	0.320921	8.4:-30953996	None:intergenic
TAGAATTTGGACAAACAAAT+AGG	0.342540	8.4:-30954122	None:intergenic
CTCTTCATGTGTTGGTTGGT+TGG	0.373535	8.4:+30954211	MS.gene23810:CDS
CTAACTCCCTAGCACCTCTT+TGG	0.374660	8.4:-30954248	None:intergenic
CCGCTTTACCAACATATTCA+TGG	0.383859	8.4:-30955416	None:intergenic
TTGACACCAAGTGGGTCAAT+AGG	0.392601	8.4:+30955519	MS.gene23810:intron
TCTATATATTCCAAAACATA+TGG	0.396171	8.4:-30953823	None:intergenic
TTCACAGGCACTTCAATTGT+TGG	0.420014	8.4:+30955014	MS.gene23810:intron
CGCTTTACCAACATATTCAT+GGG	0.420928	8.4:-30955415	None:intergenic
TGTAGAGGAGTTTCAACAAA+TGG	0.445043	8.4:-30953853	None:intergenic
GAAATTAACACTCAACTGTA+TGG	0.449483	8.4:+30954272	MS.gene23810:CDS
CATAGTTGCATTAGAATTCA+AGG	0.451961	8.4:-30955391	None:intergenic
AGCAGCAAGTGCCTCAATCA+AGG	0.453299	8.4:+30955095	MS.gene23810:CDS
TCTACATATAGCTGCATCAA+TGG	0.456263	8.4:+30953870	MS.gene23810:CDS
CCTTCTCTATACTTTAATTG+AGG	0.476987	8.4:+30953795	MS.gene23810:CDS
TTTAGCTTCCATGCAAATGA+AGG	0.482700	8.4:-30953931	None:intergenic
TGCATTAGAATTCAAGGAAG+TGG	0.485297	8.4:-30955385	None:intergenic
GATTGAAACCTTCATTTGCA+TGG	0.488316	8.4:+30953923	MS.gene23810:CDS
ACTCAACTGTATGGATGAGA+TGG	0.503634	8.4:+30954281	MS.gene23810:CDS
CTACATATAGCTGCATCAAT+GGG	0.510700	8.4:+30953871	MS.gene23810:CDS
TTTCAATCTCATAATTTCAG+TGG	0.515270	8.4:-30953908	None:intergenic
GTTAGAATTAAAGGAAGGGA+AGG	0.516481	8.4:+30954042	MS.gene23810:CDS
GAAGCTCTTCATGTGTTGGT+TGG	0.518701	8.4:+30954207	MS.gene23810:CDS
ATCTCTAAACAATGACTCAA+AGG	0.522526	8.4:+30954326	MS.gene23810:CDS
AACTTGTTAGAATTAAAGGA+AGG	0.522538	8.4:+30954037	MS.gene23810:CDS
TCTCTATACTTTAATTGAGG+AGG	0.540844	8.4:+30953798	MS.gene23810:CDS
CAAATCGCCAAAGAGGTGCT+AGG	0.545825	8.4:+30954241	MS.gene23810:CDS
TAGTAATATACCCTTGATTG+AGG	0.548194	8.4:-30955106	None:intergenic
ATTTGAAGCTCTTCATGTGT+TGG	0.549522	8.4:+30954203	MS.gene23810:CDS
CAAATAGGAAATTAGCTACA+AGG	0.562537	8.4:-30954107	None:intergenic
ACTTGTTAGAATTAAAGGAA+GGG	0.572044	8.4:+30954038	MS.gene23810:CDS
AAATCGCCAAAGAGGTGCTA+GGG	0.573895	8.4:+30954242	MS.gene23810:CDS
CTACTTCAAACATGAACACA+AGG	0.582113	8.4:+30953728	None:intergenic
CCTCAATTAAAGTATAGAGA+AGG	0.586410	8.4:-30953795	None:intergenic
TTACCTTGATAAACTCCACC+AGG	0.589003	8.4:-30955330	None:intergenic
GTGAAGTTTGCAGCTCAAGA+AGG	0.589706	8.4:+30953763	MS.gene23810:CDS
CTCAACTGTATGGATGAGAT+GGG	0.593407	8.4:+30954282	MS.gene23810:CDS
TATTGAAGATGTTACTGTGA+GGG	0.607181	8.4:+30954143	MS.gene23810:CDS
GCAGCAAGTGCCTCAATCAA+GGG	0.610729	8.4:+30955096	MS.gene23810:CDS
GCATGGAAGCTAAATCAACA+AGG	0.620083	8.4:+30953940	MS.gene23810:CDS
TTGAAGACAAATCGCCAAAG+AGG	0.638843	8.4:+30954234	MS.gene23810:CDS
ATTGATGCAGCTATATGTAG+AGG	0.639713	8.4:-30953868	None:intergenic
ATTGAAGATGTTACTGTGAG+GGG	0.652124	8.4:+30954144	MS.gene23810:CDS
CATGGAAGCTAAATCAACAA+GGG	0.665482	8.4:+30953941	MS.gene23810:CDS
TACCTTGATAAACTCCACCA+GGG	0.669953	8.4:-30955329	None:intergenic
GCTTTACCAACATATTCATG+GGG	0.680672	8.4:-30955414	None:intergenic
GAACACAAGGAATGATGACA+AGG	0.682364	8.4:+30953741	MS.gene23810:CDS
ACCTTGATAAACTCCACCAG+GGG	0.689637	8.4:-30955328	None:intergenic
CTATTGAAGATGTTACTGTG+AGG	0.691369	8.4:+30954142	MS.gene23810:CDS
AGTTTATCAAGGTAATGCTG+AGG	0.698798	8.4:+30955338	MS.gene23810:CDS
ACTATGCCCCATGAATATGT+TGG	0.700269	8.4:+30955408	MS.gene23810:CDS
CCTTGATAAACTCCACCAGG+GGG	0.739127	8.4:-30955327	None:intergenic

CRISPR-GE

badsite warning	sgRNA_sequence	Strand	Position	Region	GC_content
!!	ATAAGTTAAATTATAATTGA+GGG	-	chr8.4:30954842-30954861	None:intergenic	10.0%
!!	TATAAGTTAAATTATAATTG+AGG	-	chr8.4:30954843-30954862	None:intergenic	10.0%
!!	AAGTGTATTCAAAATTGATA+AGG	-	chr8.4:30955466-30955485	None:intergenic	20.0%
!!	CAAATTAAACTAGAAAAAGA+AGG	-	chr8.4:30954355-30954374	None:intergenic	20.0%
!!	TCTATATATTCCAAAACATA+TGG	-	chr8.4:30953826-30953845	None:intergenic	20.0%
!!!	TCTTAATTTATCTTCAAGTT+TGG	-	chr8.4:30955172-30955191	None:intergenic	20.0%
!	AACTTTGAATGCAAAAAACT+TGG	+	chr8.4:30955050-30955069	MS.gene23810:CDS	25.0%
!	AAGATCAAATGTCACATTTA+TGG	+	chr8.4:30955188-30955207	MS.gene23810:intron	25.0%
!	CATTAGAAAAGATATATCAG+AGG	+	chr8.4:30955236-30955255	MS.gene23810:intron	25.0%
!	GTAACATCTTCAATAGAATT+TGG	-	chr8.4:30954138-30954157	None:intergenic	25.0%
!	TAGAATTTGGACAAACAAAT+AGG	-	chr8.4:30954125-30954144	None:intergenic	25.0%
!	TCAAGATTCATATTGTGAAT+TGG	-	chr8.4:30954972-30954991	None:intergenic	25.0%
!	TCATACCATCTTAAAAATCA+TGG	-	chr8.4:30954483-30954502	None:intergenic	25.0%
!	TGTCAAAAGATATATTGTCA+AGG	-	chr8.4:30955505-30955524	None:intergenic	25.0%
!	TTTCAATCTCATAATTTCAG+TGG	-	chr8.4:30953911-30953930	None:intergenic	25.0%
!!	AATTGAGGGTACAAAAAAAA+AGG	-	chr8.4:30954828-30954847	None:intergenic	25.0%
!!	ACTTGTTAGAATTAAAGGAA+GGG	+	chr8.4:30954038-30954057	MS.gene23810:CDS	25.0%
!!	TAATTTATCTTCAAGTTTGG+AGG	-	chr8.4:30955169-30955188	None:intergenic	25.0%
!!!	AACTTGTTAGAATTAAAGGA+AGG	+	chr8.4:30954037-30954056	MS.gene23810:CDS	25.0%
!!!	AAGGAACTTGTTAGAATTAA+AGG	+	chr8.4:30954033-30954052	MS.gene23810:CDS	25.0%
	AAAATCCATCAAGATCCATT+GGG	+	chr8.4:30954513-30954532	MS.gene23810:intron	30.0%
	ATCTCTAAACAATGACTCAA+AGG	+	chr8.4:30954326-30954345	MS.gene23810:CDS	30.0%
	ATGACAATGTGTTTATCAGT+GGG	+	chr8.4:30954408-30954427	MS.gene23810:intron	30.0%
	CAAATAGGAAATTAGCTACA+AGG	-	chr8.4:30954110-30954129	None:intergenic	30.0%
	CATAGTTGCATTAGAATTCA+AGG	-	chr8.4:30955394-30955413	None:intergenic	30.0%
	CCATCTTAAAAATCATGGTT+AGG	-	chr8.4:30954478-30954497	None:intergenic	30.0%
	CCTCAATTAAAGTATAGAGA+AGG	-	chr8.4:30953798-30953817	None:intergenic	30.0%
	CCTTCTCTATACTTTAATTG+AGG	+	chr8.4:30953795-30953814	MS.gene23810:CDS	30.0%
	CTGACAATGTGTTTATAAGT+GGG	+	chr8.4:30954720-30954739	MS.gene23810:intron	30.0%
	GAAATTAACACTCAACTGTA+TGG	+	chr8.4:30954272-30954291	MS.gene23810:CDS	30.0%
	TAGTAATATACCCTTGATTG+AGG	-	chr8.4:30955109-30955128	None:intergenic	30.0%
	TATTGAAGATGTTACTGTGA+GGG	+	chr8.4:30954143-30954162	MS.gene23810:CDS	30.0%
	TCTCTATACTTTAATTGAGG+AGG	+	chr8.4:30953798-30953817	MS.gene23810:CDS	30.0%
	TGACAATGTGTTTATAAGTG+GGG	+	chr8.4:30954721-30954740	MS.gene23810:intron	30.0%
	TTCATGTTATTCCAATTCAC+AGG	+	chr8.4:30954999-30955018	MS.gene23810:intron	30.0%
!	ATATATCTTTTGACACCAAG+TGG	+	chr8.4:30955510-30955529	MS.gene23810:intron	30.0%
!	TATATCTTTTGACACCAAGT+GGG	+	chr8.4:30955511-30955530	MS.gene23810:intron	30.0%
!	TCGATTTGTAGACATGAATA+AGG	+	chr8.4:30954014-30954033	MS.gene23810:CDS	30.0%
!!	CCTAACCATGATTTTTAAGA+TGG	+	chr8.4:30954475-30954494	MS.gene23810:intron	30.0%
	AGTTTATCAAGGTAATGCTG+AGG	+	chr8.4:30955338-30955357	MS.gene23810:CDS	35.0%
	ATTGAAGATGTTACTGTGAG+GGG	+	chr8.4:30954144-30954163	MS.gene23810:CDS	35.0%
	ATTGATGCAGCTATATGTAG+AGG	-	chr8.4:30953871-30953890	None:intergenic	35.0%
	CAAAATCCATCAAGATCCAT+TGG	+	chr8.4:30954512-30954531	MS.gene23810:intron	35.0%
	CATGACAATGTGTTTATCAG+TGG	+	chr8.4:30954407-30954426	MS.gene23810:intron	35.0%
	CATGGAAGCTAAATCAACAA+GGG	+	chr8.4:30953941-30953960	MS.gene23810:CDS	35.0%
	CCACTTATAAACACATTGTC+AGG	-	chr8.4:30954722-30954741	None:intergenic	35.0%
	CCTGACAATGTGTTTATAAG+TGG	+	chr8.4:30954719-30954738	MS.gene23810:intron	35.0%
	CGCTTTACCAACATATTCAT+GGG	-	chr8.4:30955418-30955437	None:intergenic	35.0%
	CTACATATAGCTGCATCAAT+GGG	+	chr8.4:30953871-30953890	MS.gene23810:CDS	35.0%
	CTATTGAAGATGTTACTGTG+AGG	+	chr8.4:30954142-30954161	MS.gene23810:CDS	35.0%
	CTTCATATTGCTTGCCAAAA+TGG	+	chr8.4:30954075-30954094	MS.gene23810:CDS	35.0%
	GACAATGTGTTTATAAGTGG+GGG	+	chr8.4:30954722-30954741	MS.gene23810:intron	35.0%
	GATTGAAACCTTCATTTGCA+TGG	+	chr8.4:30953923-30953942	MS.gene23810:CDS	35.0%
	GCTTTACCAACATATTCATG+GGG	-	chr8.4:30955417-30955436	None:intergenic	35.0%
	GTTAGAATTAAAGGAAGGGA+AGG	+	chr8.4:30954042-30954061	MS.gene23810:CDS	35.0%
	TCTACATATAGCTGCATCAA+TGG	+	chr8.4:30953870-30953889	MS.gene23810:CDS	35.0%
	TGACAATGTGTTTATCAGTG+GGG	+	chr8.4:30954409-30954428	MS.gene23810:intron	35.0%
	TGCATTAGAATTCAAGGAAG+TGG	-	chr8.4:30955388-30955407	None:intergenic	35.0%
	TGTAGAGGAGTTTCAACAAA+TGG	-	chr8.4:30953856-30953875	None:intergenic	35.0%
!	AAGGGTATATTACTAAGTGC+TGG	+	chr8.4:30955114-30955133	MS.gene23810:intron	35.0%
!	ATCGAAGCACAATACTCTTT+TGG	-	chr8.4:30953999-30954018	None:intergenic	35.0%
!	ATTTGAAGCTCTTCATGTGT+TGG	+	chr8.4:30954203-30954222	MS.gene23810:CDS	35.0%
!	CAAGGTCAATTTCTCCATTT+TGG	-	chr8.4:30954092-30954111	None:intergenic	35.0%
!	CCATGAATATGTTGGTAAAG+CGG	+	chr8.4:30955416-30955435	MS.gene23810:intron	35.0%
!	TTTAGCTTCCATGCAAATGA+AGG	-	chr8.4:30953934-30953953	None:intergenic	35.0%
!	TTTTGGCAAGCAATATGAAG+AGG	-	chr8.4:30954075-30954094	None:intergenic	35.0%
!!	ACTCTTTTGGTTGTTTTGCA+TGG	-	chr8.4:30953986-30954005	None:intergenic	35.0%
!!!	GATCTTGATGGATTTTGAAG+AGG	-	chr8.4:30954509-30954528	None:intergenic	35.0%
	ACTATGCCCCATGAATATGT+TGG	+	chr8.4:30955408-30955427	MS.gene23810:CDS	40.0%
	ACTCAACTGTATGGATGAGA+TGG	+	chr8.4:30954281-30954300	MS.gene23810:CDS	40.0%
	CCGCTTTACCAACATATTCA+TGG	-	chr8.4:30955419-30955438	None:intergenic	40.0%
	CTAAGACAACCCCATAAAAC+CGG	-	chr8.4:30954767-30954786	None:intergenic	40.0%
	CTCAACTGTATGGATGAGAT+GGG	+	chr8.4:30954282-30954301	MS.gene23810:CDS	40.0%
	GAACACAAGGAATGATGACA+AGG	+	chr8.4:30953741-30953760	MS.gene23810:CDS	40.0%
	GACAATGTGTTTATCAGTGG+GGG	+	chr8.4:30954410-30954429	MS.gene23810:intron	40.0%
	GCATGGAAGCTAAATCAACA+AGG	+	chr8.4:30953940-30953959	MS.gene23810:CDS	40.0%
	TACCTTGATAAACTCCACCA+GGG	-	chr8.4:30955332-30955351	None:intergenic	40.0%
	TGTGTTAAAGAGTCCCACAT+CGG	+	chr8.4:30954685-30954704	MS.gene23810:intron	40.0%
	TTACCTTGATAAACTCCACC+AGG	-	chr8.4:30955333-30955352	None:intergenic	40.0%
	TTCACAGGCACTTCAATTGT+TGG	+	chr8.4:30955014-30955033	MS.gene23810:intron	40.0%
	TTGAAGACAAATCGCCAAAG+AGG	+	chr8.4:30954234-30954253	MS.gene23810:CDS	40.0%
!	ATCTGGAGCGTGAACATAAA+TGG	-	chr8.4:30954643-30954662	None:intergenic	40.0%
!	CAATTGAAGTGCCTGTGAAT+TGG	-	chr8.4:30955013-30955032	None:intergenic	40.0%
!	TGAGGAGGATCCATATGTTT+TGG	+	chr8.4:30953813-30953832	MS.gene23810:CDS	40.0%
!!	GCATCTTTGACTTTTGAGCT+AGG	-	chr8.4:30955147-30955166	None:intergenic	40.0%
!!	TTTGGTTGTTTTGCATGGCA+AGG	-	chr8.4:30953981-30954000	None:intergenic	40.0%
	ACCTCATAAGCCGATGTTGT+GGG	+	chr8.4:30954441-30954460	MS.gene23810:intron	45.0%
	ACCTTGATAAACTCCACCAG+GGG	-	chr8.4:30955331-30955350	None:intergenic	45.0%
	AGCCTCCTCCAAGATTCATT+AGG	+	chr8.4:30954581-30954600	MS.gene23810:intron	45.0%
	AGGTCATCTCTTATCCGATG+TGG	-	chr8.4:30954702-30954721	None:intergenic	45.0%
	ATGTCATCTCTTATCCGACG+TGG	-	chr8.4:30954390-30954409	None:intergenic	45.0%
	CTAACACAACCCCACAACAT+CGG	-	chr8.4:30954454-30954473	None:intergenic	45.0%
	GCGTGAACATAAATGGTGTG+TGG	-	chr8.4:30954636-30954655	None:intergenic	45.0%
	GGTCATCTCTTATCCGATGT+GGG	-	chr8.4:30954701-30954720	None:intergenic	45.0%
	GTGAAGTTTGCAGCTCAAGA+AGG	+	chr8.4:30953763-30953782	MS.gene23810:CDS	45.0%
	TGCTATCAGGTTTCCGCTAT+CGG	+	chr8.4:30954609-30954628	MS.gene23810:intron	45.0%
	TGCTGTAAGGTTTCCGCTAT+CGG	+	chr8.4:30954541-30954560	MS.gene23810:intron	45.0%
	TGTCATCTCTTATCCGACGT+GGG	-	chr8.4:30954389-30954408	None:intergenic	45.0%
	TGTCTTAAAGAGTCCCACGT+CGG	+	chr8.4:30954373-30954392	MS.gene23810:intron	45.0%
!	GAAGCTCTTCATGTGTTGGT+TGG	+	chr8.4:30954207-30954226	MS.gene23810:CDS	45.0%
!	TTTTGCATGGCAAGGTGGAT+TGG	-	chr8.4:30953973-30953992	None:intergenic	45.0%
!!	AAATCGCCAAAGAGGTGCTA+GGG	+	chr8.4:30954242-30954261	MS.gene23810:CDS	45.0%
!!	ACCTCTCAAGCCGGTTTTAT+GGG	+	chr8.4:30954754-30954773	MS.gene23810:intron	45.0%
!!	CGGTTTTATGGGGTTGTCTT+AGG	+	chr8.4:30954765-30954784	MS.gene23810:intron	45.0%
!!	CTCTTCATGTGTTGGTTGGT+TGG	+	chr8.4:30954211-30954230	MS.gene23810:CDS	45.0%
	AATGGTGTGTGGTCCGATAG+CGG	-	chr8.4:30954625-30954644	None:intergenic	50.0%
	ACAATCCTCACCTCTCAAGC+CGG	+	chr8.4:30954745-30954764	MS.gene23810:intron	50.0%
	AGCAGCAAGTGCCTCAATCA+AGG	+	chr8.4:30955095-30955114	MS.gene23810:CDS	50.0%
	CACCTCATAAGCCGATGTTG+TGG	+	chr8.4:30954440-30954459	MS.gene23810:intron	50.0%
	CCTCATAAGCCGATGTTGTG+GGG	+	chr8.4:30954442-30954461	MS.gene23810:intron	50.0%
	CCTTGATAAACTCCACCAGG+GGG	-	chr8.4:30955330-30955349	None:intergenic	50.0%
	CGATGTTGTGGGGTTGTGTT+AGG	+	chr8.4:30954452-30954471	MS.gene23810:intron	50.0%
	CTAACTCCCTAGCACCTCTT+TGG	-	chr8.4:30954251-30954270	None:intergenic	50.0%
	GCAGCAAGTGCCTCAATCAA+GGG	+	chr8.4:30955096-30955115	MS.gene23810:CDS	50.0%
	GCAGGTGGCCTAATGAATCT+TGG	-	chr8.4:30954592-30954611	None:intergenic	50.0%
	GGCCTAATGAATCTTGGAGG+AGG	-	chr8.4:30954586-30954605	None:intergenic	50.0%
	GGTGGCCTAATGAATCTTGG+AGG	-	chr8.4:30954589-30954608	None:intergenic	50.0%
	TACCATCAGTGGTCCGATAG+CGG	-	chr8.4:30954557-30954576	None:intergenic	50.0%
	TCATTAGGCCACCTGCTATC+AGG	+	chr8.4:30954596-30954615	MS.gene23810:intron	50.0%
!	GGAGGCTCTAATACCATCAG+TGG	-	chr8.4:30954568-30954587	None:intergenic	50.0%
!!	CAAATCGCCAAAGAGGTGCT+AGG	+	chr8.4:30954241-30954260	MS.gene23810:CDS	50.0%
!!	CACCTCTCAAGCCGGTTTTA+TGG	+	chr8.4:30954753-30954772	MS.gene23810:intron	50.0%
!!	CCTCTCAAGCCGGTTTTATG+GGG	+	chr8.4:30954755-30954774	MS.gene23810:intron	50.0%
!!	GATAGCGGAAACCTGATAGC+AGG	-	chr8.4:30954610-30954629	None:intergenic	50.0%
!!	GATAGCGGAAACCTTACAGC+AGG	-	chr8.4:30954542-30954561	None:intergenic	50.0%
!!	GGTTGTTTTGCATGGCAAGG+TGG	-	chr8.4:30953978-30953997	None:intergenic	50.0%
!!	TAAAACCGGCTTGAGAGGTG+AGG	-	chr8.4:30954753-30954772	None:intergenic	50.0%
	AGCGGAAACCTGATAGCAGG+TGG	-	chr8.4:30954607-30954626	None:intergenic	55.0%
	AGCGGAAACCTTACAGCAGG+TGG	-	chr8.4:30954539-30954558	None:intergenic	55.0%
	ATGTCCAGTCCTGGGTGTGA+GGG	+	chr8.4:30954661-30954680	MS.gene23810:intron	55.0%
	CAATCAGCACTTAGTCCCCC+TGG	+	chr8.4:30955312-30955331	MS.gene23810:intron	55.0%
	CCCCCTGGTGGAGTTTATCA+AGG	+	chr8.4:30955327-30955346	MS.gene23810:CDS	55.0%
	GGTGGCCCAATGGATCTTGA+TGG	-	chr8.4:30954521-30954540	None:intergenic	55.0%
	TTAACACACCCCTCACACCC+AGG	-	chr8.4:30954673-30954692	None:intergenic	55.0%
	TTCCGCTATCGGACCACTGA+TGG	+	chr8.4:30954552-30954571	MS.gene23810:intron	55.0%
!!	CCCCACAACATCGGCTTATG+AGG	-	chr8.4:30954445-30954464	None:intergenic	55.0%
!!	CCCCATAAAACCGGCTTGAG+AGG	-	chr8.4:30954758-30954777	None:intergenic	55.0%
	ACGCTCCAGATGTCCAGTCC+TGG	+	chr8.4:30954652-30954671	MS.gene23810:intron	60.0%
	CACACCCAGGACTGGACATC+TGG	-	chr8.4:30954660-30954679	None:intergenic	60.0%
	CCATTGGGCCACCTGCTGTA+AGG	+	chr8.4:30954528-30954547	MS.gene23810:intron	60.0%
	CCTTACAGCAGGTGGCCCAA+TGG	-	chr8.4:30954531-30954550	None:intergenic	60.0%
	CGCTCCAGATGTCCAGTCCT+GGG	+	chr8.4:30954653-30954672	MS.gene23810:intron	60.0%
	GATGTCCAGTCCTGGGTGTG+AGG	+	chr8.4:30954660-30954679	MS.gene23810:intron	60.0%
	TCAGCACTTAGTCCCCCTGG+TGG	+	chr8.4:30955315-30955334	MS.gene23810:intron	60.0%
	TGTCCAGTCCTGGGTGTGAG+GGG	+	chr8.4:30954662-30954681	MS.gene23810:intron	60.0%
	ACACCCCTCACACCCAGGAC+TGG	-	chr8.4:30954668-30954687	None:intergenic	65.0%

Chromosome	Type	Strat	End	Strand	Name
chr8.4	gene	30953739	30955540	30953739	ID=MS.gene23810
chr8.4	mRNA	30953739	30955540	30953739	ID=MS.gene23810.t1;Parent=MS.gene23810
chr8.4	exon	30953739	30954347	30953739	ID=MS.gene23810.t1.exon1;Parent=MS.gene23810.t1
chr8.4	CDS	30953739	30954347	30953739	ID=cds.MS.gene23810.t1;Parent=MS.gene23810.t1
chr8.4	exon	30955021	30955117	30955021	ID=MS.gene23810.t1.exon2;Parent=MS.gene23810.t1
chr8.4	CDS	30955021	30955117	30955021	ID=cds.MS.gene23810.t1;Parent=MS.gene23810.t1
chr8.4	exon	30955319	30955429	30955319	ID=MS.gene23810.t1.exon3;Parent=MS.gene23810.t1
chr8.4	CDS	30955319	30955429	30955319	ID=cds.MS.gene23810.t1;Parent=MS.gene23810.t1
chr8.4	exon	30955530	30955540	30955530	ID=MS.gene23810.t1.exon4;Parent=MS.gene23810.t1
chr8.4	CDS	30955530	30955540	30955530	ID=cds.MS.gene23810.t1;Parent=MS.gene23810.t1

Gene Sequence

>MS.gene23810

ATGAACACAAGGAATGATGACAAGGTGAAGTTTGCAGCTCAAGAAGGTGATATAAACCTTCTCTATACTTTAATTGAGGAGGATCCATATGTTTTGGAATATATAGATTTGATTCCATTTGTTGAAACTCCTCTACATATAGCTGCATCAATGGGACATGTTCGATTTTCCACTGAAATTATGAGATTGAAACCTTCATTTGCATGGAAGCTAAATCAACAAGGGTTCAGTCCAATCCACCTTGCCATGCAAAACAACCAAAAGAGTATTGTGCTTCGATTTGTAGACATGAATAAGGAACTTGTTAGAATTAAAGGAAGGGAAGGTTTAACTCCTCTTCATATTGCTTGCCAAAATGGAGAAATTGACCTTGTAGCTAATTTCCTATTTGTTTGTCCAAATTCTATTGAAGATGTTACTGTGAGGGGTGAGACTGCACTTCATATTGCTGTAAGAAATAAACAATTTGAAGCTCTTCATGTGTTGGTTGGTTGGTTGAAGACAAATCGCCAAAGAGGTGCTAGGGAGTTAGAGAAATTAACACTCAACTGTATGGATGAGATGGGAAATACTATTTTGCACATTTCATCTCTAAACAATGACTCAAAGGTATCCTTCTTTTTCTAGTTTAATTTGTCTTAAAGAGTCCCACGTCGGATAAGAGATGACATGACAATGTGTTTATCAGTGGGGGCAATCTTCACCTCATAAGCCGATGTTGTGGGGTTGTGTTAGGCCTAACCATGATTTTTAAGATGGTATGAGAGCCTCTTCAAAATCCATCAAGATCCATTGGGCCACCTGCTGTAAGGTTTCCGCTATCGGACCACTGATGGTATTAGAGCCTCCTCCAAGATTCATTAGGCCACCTGCTATCAGGTTTCCGCTATCGGACCACACACCATTTATGTTCACGCTCCAGATGTCCAGTCCTGGGTGTGAGGGGTGTGTTAAAGAGTCCCACATCGGATAAGAGATGACCTGACAATGTGTTTATAAGTGGGGGACAATCCTCACCTCTCAAGCCGGTTTTATGGGGTTGTCTTAGGTCTAATCACAATTTCTAAGAATGTCTTCTTTATACATCCTTTTTTTTTGTACCCTCAATTATAATTTAACTTATAACTTTGCTAAGTCACTTATTTTTAATTAAAAATGAATTTTTTTATACGACTAATATATTTTACAATTCATAATAAAATTCAATTTACAAATCAATAAATAGCTATTCCAATTCACAATATGAATCTTGATTTGTTATTCATGTTATTCCAATTCACAGGCACTTCAATTGTTGGTAAAGACTAAGATAACTTTGAATGCAAAAAACTTGGAGAACTCAACAGCATTAGACATAGCAGCAAGTGCCTCAATCAAGGGTATATTACTAAGTGCTGGAGCAAAACCTAGCTCAAAAGTCAAAGATGCCTCCAAACTTGAAGATAAATTAAGATCAAATGTCACATTTATGGATAAAATATTAATTTATATACTACGCATTAGAAAAGATATATCAGAGGAACAACGCAACACTTTTCTAATAGTTGCTGCTCTTATTGCAACTGCTACATATCAATCAGCACTTAGTCCCCCTGGTGGAGTTTATCAAGGTAATGCTGAGGATCACAATAATAATGTGAAAAACACCACTTCCTTGAATTCTAATGCAACTATGCCCCATGAATATGTTGGTAAAGCGGTTATAAATGAAAGTGATTTTCTTACCTTATCAATTTTGAATACACTTTCACTTCTGTTATCAACCTTGACAATATATCTTTTGACACCAAGTGGGTCAATAG

Protein sequence

>MS.gene23810.t1

MNTRNDDKVKFAAQEGDINLLYTLIEEDPYVLEYIDLIPFVETPLHIAASMGHVRFSTEIMRLKPSFAWKLNQQGFSPIHLAMQNNQKSIVLRFVDMNKELVRIKGREGLTPLHIACQNGEIDLVANFLFVCPNSIEDVTVRGETALHIAVRNKQFEALHVLVGWLKTNRQRGARELEKLTLNCMDEMGNTILHISSLNNDSKALQLLVKTKITLNAKNLENSTALDIAASASIKALSPPGGVYQGNAEDHNNNVKNTTSLNSNATMPHEYVVGQ