AlfalfaGEDB | MS.gene69687

M. sativa cultivar XinJiangDaYe / MS.gene69687

KEGG: -
GO: GO:0003674 GO:0005488 GO:0005515
PFAM: PF12796.10 PF13857.9 PF13962.9

Nr:

Query id	Subject id	identity %	alignment length	mismatches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
MS.gene69687.t1	AES77856.1	72.6	310	70	2	4	304	3	306	5.20E-116	427.6

Swissprot:

Query id	Subject id	identity %	alignment length	mismatches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
MS.gene69687.t1	Q8GYH5	25.3	304	209	4	7	294	2	303	1.1e-18	95.5

Trembl:

Query id	Subject id	identity %	alignment length	mismatches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
MS.gene69687.t1	G7KSX2	72.6	310	70	2	4	304	3	306	3.7e-116	427.6

TFs/TRs:

Gene ID	Type	Classification

Protein Kinases:

Gene ID	Type	Classification

Network:

Co-expression Network:

Gene1	Gene2	correlation coefficient	p_value	FDR

PPI:

Gene1	Gene2	Type
MS.gene69687	MS.gene51258	PPI
MS.gene69687	MS.gene32723	PPI
MS.gene69687	MS.gene010910	PPI
MS.gene69687	MS.gene053363	PPI
MS.gene69687	MS.gene066467	PPI
MS.gene69687	MS.gene024753	PPI
MS.gene78281	MS.gene69687	PPI
MS.gene69687	MS.gene32726	PPI
MS.gene69687	MS.gene71122	PPI
MS.gene69687	MS.gene24922	PPI
MS.gene69687	MS.gene052956	PPI
MS.gene69687	MS.gene73119	PPI
MS.gene69687	MS.gene92243	PPI
MS.gene69687	MS.gene85534	PPI
MS.gene69687	MS.gene037950	PPI
MS.gene69687	MS.gene027074	PPI
MS.gene69687	MS.gene97943	PPI
MS.gene69687	MS.gene51262	PPI
MS.gene69687	MS.gene23881	PPI
MS.gene69687	MS.gene26672	PPI
MS.gene69687	MS.gene014931	PPI
MS.gene69687	MS.gene21888	PPI
MS.gene69687	MS.gene97379	PPI
MS.gene69687	MS.gene066500	PPI
MS.gene69687	MS.gene23852	PPI
MS.gene69687	MS.gene39623	PPI
MS.gene69687	MS.gene36842	PPI
MS.gene69687	MS.gene066464	PPI
MS.gene69687	MS.gene07706	PPI
MS.gene69687	MS.gene071113	PPI
MS.gene69687	MS.gene90400	PPI
MS.gene69687	MS.gene022109	PPI
MS.gene69687	MS.gene041770	PPI
MS.gene010912	MS.gene69687	PPI
MS.gene69687	MS.gene81055	PPI
MS.gene69687	MS.gene65775	PPI
MS.gene69687	MS.gene99554	PPI
MS.gene69687	MS.gene80163	PPI
MS.gene69687	MS.gene02469	PPI
MS.gene69687	MS.gene33377	PPI
MS.gene69687	MS.gene51335	PPI
MS.gene69687	MS.gene045937	PPI
MS.gene69687	MS.gene027072	PPI
MS.gene69687	MS.gene51278	PPI
MS.gene69687	MS.gene69966	PPI
MS.gene69687	MS.gene87218	PPI
MS.gene69687	MS.gene025229	PPI
MS.gene69687	MS.gene30433	PPI
MS.gene69687	MS.gene066501	PPI
MS.gene69687	MS.gene043742	PPI
MS.gene69687	MS.gene062662	PPI
MS.gene69687	MS.gene027441	PPI
MS.gene69687	MS.gene21734	PPI
MS.gene69687	MS.gene30177	PPI
MS.gene69687	MS.gene70008	PPI
MS.gene69687	MS.gene008767	PPI
MS.gene69687	MS.gene008833	PPI
MS.gene69687	MS.gene67157	PPI
MS.gene69687	MS.gene23811	PPI
MS.gene039682	MS.gene69687	PPI
MS.gene69687	MS.gene25244	PPI
MS.gene69687	MS.gene69965	PPI
MS.gene69687	MS.gene82740	PPI
MS.gene69687	MS.gene051003	PPI
MS.gene69687	MS.gene48655	PPI
MS.gene69687	MS.gene09785	PPI
MS.gene69687	MS.gene64441	PPI
MS.gene47479	MS.gene69687	PPI
MS.gene69687	MS.gene066046	PPI
MS.gene69687	MS.gene007486	PPI
MS.gene69687	MS.gene78281	PPI
MS.gene69687	MS.gene035805	PPI
MS.gene69687	MS.gene23810	PPI
MS.gene69687	MS.gene08470	PPI
MS.gene69687	MS.gene027073	PPI
MS.gene69687	MS.gene34712	PPI
MS.gene69687	MS.gene65463	PPI
MS.gene69687	MS.gene007485	PPI
MS.gene69687	MS.gene007487	PPI
MS.gene69687	MS.gene037184	PPI
MS.gene69687	MS.gene23196	PPI
MS.gene69687	MS.gene039682	PPI
MS.gene69687	MS.gene067705	PPI
MS.gene69687	MS.gene71204	PPI
MS.gene69687	MS.gene41291	PPI
MS.gene056455	MS.gene69687	PPI
MS.gene69687	MS.gene027075	PPI
MS.gene69687	MS.gene061932	PPI
MS.gene69687	MS.gene050457	PPI
MS.gene69687	MS.gene99973	PPI
MS.gene69687	MS.gene30174	PPI
MS.gene69687	MS.gene26021	PPI
MS.gene69965	MS.gene69687	PPI
MS.gene69687	MS.gene064542	PPI
MS.gene69687	MS.gene91775	PPI
MS.gene69687	MS.gene25515	PPI
MS.gene69687	MS.gene34651	PPI
MS.gene69687	MS.gene056455	PPI
MS.gene69687	MS.gene89986	PPI
MS.gene69687	MS.gene22482	PPI
MS.gene69687	MS.gene050270	PPI
MS.gene30172	MS.gene69687	PPI
MS.gene69687	MS.gene60920	PPI
MS.gene23852	MS.gene69687	PPI
MS.gene69687	MS.gene058128	PPI
MS.gene69687	MS.gene34009	PPI
MS.gene027071	MS.gene69687	PPI
MS.gene69687	MS.gene018518	PPI
MS.gene69687	MS.gene043662	PPI
MS.gene69687	MS.gene065848	PPI
MS.gene69687	MS.gene004844	PPI
MS.gene69687	MS.gene068249	PPI
MS.gene69687	MS.gene99588	PPI
MS.gene69687	MS.gene005995	PPI
MS.gene69687	MS.gene54764	PPI
MS.gene69687	MS.gene24806	PPI
MS.gene69687	MS.gene038519	PPI
MS.gene69687	MS.gene27223	PPI
MS.gene010910	MS.gene69687	PPI
MS.gene69687	MS.gene042783	PPI
MS.gene69687	MS.gene25024	PPI
MS.gene69687	MS.gene012203	PPI
MS.gene063222	MS.gene69687	PPI
MS.gene69687	MS.gene26019	PPI
MS.gene69687	MS.gene050272	PPI
MS.gene69687	MS.gene63085	PPI
MS.gene69687	MS.gene26532	PPI
MS.gene69687	MS.gene050456	PPI
MS.gene69687	MS.gene30176	PPI

Query id	Subject id	identity %	alignment length	mismatches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
MS.gene69687.t1	MTR_8g039620	72.698	315	74	2	2	304	6	320	1.52e-160	455
MS.gene69687.t1	MTR_8g072510	73.567	314	72	3	1	304	1	313	2.70e-159	452
MS.gene69687.t1	MTR_7g021090	72.581	310	70	2	4	304	3	306	3.92e-159	450
MS.gene69687.t1	MTR_1g059930	71.475	305	78	1	8	303	10	314	3.77e-154	439
MS.gene69687.t1	MTR_3g016210	67.593	324	85	2	1	304	1	324	1.95e-150	429
MS.gene69687.t1	MTR_8g062410	70.159	315	75	4	1	304	1	307	7.51e-146	418
MS.gene69687.t1	MTR_7g451420	66.559	311	93	3	4	304	3	312	4.50e-139	396
MS.gene69687.t1	MTR_8g073260	63.057	314	106	2	1	304	1	314	1.05e-137	397
MS.gene69687.t1	MTR_8g068990	64.401	309	84	4	8	304	10	304	8.11e-134	388
MS.gene69687.t1	MTR_8g069880	64.194	310	98	5	6	304	3	310	2.58e-124	364
MS.gene69687.t1	MTR_8g467780	58.360	317	111	4	8	304	9	324	7.97e-119	350
MS.gene69687.t1	MTR_8g040930	65.660	265	79	2	52	304	1	265	4.69e-117	342
MS.gene69687.t1	MTR_8g041240	65.660	265	79	2	52	304	1	265	4.69e-117	342
MS.gene69687.t1	MTR_8g066670	60.635	315	110	5	1	304	1067	1378	5.87e-114	360
MS.gene69687.t1	MTR_3g105650	52.258	310	133	3	7	301	2	311	2.83e-104	311
MS.gene69687.t1	MTR_8g073275	43.077	325	103	6	52	304	1	315	1.23e-70	226
MS.gene69687.t1	MTR_1g069110	30.333	300	189	8	13	305	21	307	4.92e-31	121
MS.gene69687.t1	MTR_7g099580	27.336	289	168	7	22	305	24	275	3.84e-29	114
MS.gene69687.t1	MTR_7g099570	30.045	223	139	4	13	227	12	225	1.18e-23	101
MS.gene69687.t1	MTR_2g101320	30.769	195	120	3	38	229	134	316	1.12e-21	95.9
MS.gene69687.t1	MTR_7g117620	26.481	287	168	6	45	300	119	393	1.96e-20	92.0
MS.gene69687.t1	MTR_1g115575	24.913	289	173	6	45	301	169	445	2.81e-18	85.5
MS.gene69687.t1	MTR_2g101310	29.474	190	123	3	41	229	137	316	4.66e-17	82.0
MS.gene69687.t1	MTR_2g101310	28.421	190	125	2	41	229	137	316	8.17e-17	81.3
MS.gene69687.t1	MTR_4g062100	25.769	260	161	6	5	256	69	304	2.99e-16	79.7
MS.gene69687.t1	MTR_2g096190	23.724	333	200	9	5	300	65	380	7.09e-15	75.5
MS.gene69687.t1	MTR_7g100390	23.724	333	199	8	5	300	48	362	1.65e-14	74.3
MS.gene69687.t1	MTR_6g027840	28.426	197	127	8	45	231	246	438	1.29e-12	68.6
MS.gene69687.t1	MTR_7g100430	21.237	372	217	10	5	301	67	437	2.38e-12	67.8
MS.gene69687.t1	MTR_2g033050	27.841	176	115	4	61	232	217	384	2.67e-12	67.4
MS.gene69687.t1	MTR_2g096760	25.676	222	133	8	5	210	10	215	1.72e-11	65.1

Query id	Subject id	identity %	alignment length	mismatches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
MS.gene69687.t1	AT4G10720	42.722	316	164	3	7	305	2	317	2.23e-81	252
MS.gene69687.t1	AT4G10720	42.331	326	151	4	7	305	2	317	5.53e-81	253
MS.gene69687.t1	AT5G15500	41.083	314	167	6	7	302	2	315	1.09e-70	226
MS.gene69687.t1	AT1G14500	37.658	316	179	4	7	304	2	317	6.17e-70	224
MS.gene69687.t1	AT1G14480	39.498	319	170	5	7	304	2	318	7.57e-69	221
MS.gene69687.t1	AT5G54620	40.260	308	168	2	7	298	2	309	1.71e-68	220
MS.gene69687.t1	AT5G54610	36.721	305	175	4	7	295	2	304	2.04e-63	206
MS.gene69687.t1	AT1G14480	34.983	303	165	5	7	305	2	276	4.24e-51	174
MS.gene69687.t1	AT5G15500	36.538	208	115	5	112	302	2	209	5.13e-31	119
MS.gene69687.t1	AT5G51160	29.520	271	154	5	64	304	35	298	3.27e-30	119
MS.gene69687.t1	AT4G03500	25.079	315	170	8	44	311	217	512	1.23e-21	95.9
MS.gene69687.t1	AT4G03500	25.079	315	170	8	44	311	194	489	1.48e-21	95.5
MS.gene69687.t1	AT4G03500	25.079	315	170	8	44	311	194	489	1.48e-21	95.5
MS.gene69687.t1	AT1G34050	25.000	268	156	6	66	305	174	424	8.57e-19	87.0
MS.gene69687.t1	AT1G07710	24.012	329	203	7	5	300	65	379	2.72e-16	79.7
MS.gene69687.t1	AT1G07710	24.012	329	203	7	5	300	65	379	2.72e-16	79.7
MS.gene69687.t1	AT5G54700	28.846	208	121	6	102	306	23	206	2.74e-16	79.0
MS.gene69687.t1	AT3G12360	23.875	289	176	6	45	301	155	431	1.54e-15	77.4
MS.gene69687.t1	AT3G12360	23.875	289	176	6	45	301	167	443	1.63e-15	77.4
MS.gene69687.t1	AT2G31820	25.000	288	171	8	45	300	227	501	1.97e-15	77.4
MS.gene69687.t1	AT3G09550	24.924	329	192	11	10	301	147	457	3.83e-15	76.3
MS.gene69687.t1	AT3G09550	24.924	329	192	11	10	301	147	457	3.83e-15	76.3
MS.gene69687.t1	AT3G09550	24.924	329	192	11	10	301	154	464	3.89e-15	76.3
MS.gene69687.t1	AT4G03460	26.199	271	139	7	76	301	200	454	4.12e-15	76.3
MS.gene69687.t1	AT4G03460	26.199	271	139	7	76	301	232	486	4.35e-15	76.3
MS.gene69687.t1	AT1G05640	25.352	355	203	10	6	300	113	465	6.40e-15	75.9
MS.gene69687.t1	AT1G03670	28.696	230	119	6	102	311	279	483	6.89e-15	75.5
MS.gene69687.t1	AT4G03480	23.750	320	181	9	10	314	360	631	2.65e-14	73.9
MS.gene69687.t1	AT4G03480	23.750	320	181	9	10	314	357	628	3.07e-14	73.6
MS.gene69687.t1	AT5G02620	22.881	236	168	3	5	239	55	277	1.29e-13	71.6
MS.gene69687.t1	AT5G02620	22.881	236	168	3	5	239	55	277	1.29e-13	71.6
MS.gene69687.t1	AT5G02620	22.881	236	168	3	5	239	55	277	1.29e-13	71.6
MS.gene69687.t1	AT4G03490	24.585	301	174	9	10	301	201	457	3.13e-13	70.5
MS.gene69687.t1	AT4G03490	24.585	301	174	9	10	301	211	467	3.23e-13	70.5
MS.gene69687.t1	AT4G03490	24.585	301	174	9	10	301	211	467	3.28e-13	70.5
MS.gene69687.t1	AT1G10340	23.762	303	146	7	44	304	169	428	8.13e-13	69.3
MS.gene69687.t1	AT1G10340	23.762	303	146	7	44	304	173	432	8.78e-13	69.3
MS.gene69687.t1	AT4G03450	23.607	305	169	8	13	302	230	485	1.11e-12	68.9
MS.gene69687.t1	AT4G03450	23.607	305	169	8	13	302	230	485	1.11e-12	68.9
MS.gene69687.t1	AT5G50140	25.854	205	126	5	41	229	26	220	1.34e-12	68.6
MS.gene69687.t1	AT4G05040	23.899	318	207	6	10	310	235	534	6.45e-12	66.6
MS.gene69687.t1	AT4G05040	23.899	318	207	6	10	310	235	534	6.45e-12	66.6
MS.gene69687.t1	AT4G05040	23.899	318	207	6	10	310	235	534	6.45e-12	66.6
MS.gene69687.t1	AT4G05040	23.899	318	207	6	10	310	235	534	6.45e-12	66.6
MS.gene69687.t1	AT4G05040	23.899	318	207	6	10	310	235	534	6.45e-12	66.6
MS.gene69687.t1	AT4G05040	23.899	318	207	6	10	310	235	534	6.45e-12	66.6
MS.gene69687.t1	AT4G05040	23.899	318	207	6	10	310	235	534	6.45e-12	66.6
MS.gene69687.t1	AT5G02620	22.780	259	163	4	5	239	55	300	9.21e-11	63.2
MS.gene69687.t1	AT5G02620	22.780	259	163	4	5	239	55	300	9.21e-11	63.2

Find 62 sgRNAs with CRISPR-Local

Find 142 sgRNAs with CRISPR-GE

CRISPR-Local

CRISPR-Local
sgRNA_sequence	on_target_score	Position	Region
AAAGACCTTGTTAGAGTTAA+AGG	0.117136	8.3:+37027393	MS.gene69687:CDS
GCCAGCTAACAAGTACTTTA+AGG	0.142664	8.3:-37027572	None:intergenic
TTACCTGCAGCTCACTTCTT+AGG	0.180721	8.3:-37027689	None:intergenic
TCAAGATGATCCATCCATTT+TGG	0.183666	8.3:+37027173	MS.gene69687:CDS
GTAATATGTCAACTTATTTA+AGG	0.200563	8.3:+37029021	MS.gene69687:CDS
TTTACATATTGCTGCATCTA+TGG	0.203638	8.3:+37027230	MS.gene69687:CDS
CTTCATTATGCAAGTCAAAT+TGG	0.280737	8.3:+37027435	MS.gene69687:CDS
TGACATATTACCTCTAATTC+TGG	0.294950	8.3:-37029009	None:intergenic
GGCGCTCAAAAGCTGGAAAA+TGG	0.305181	8.3:+37027615	MS.gene69687:CDS
GGATGGGGCTGGATCCTTGC+GGG	0.330635	8.3:-37027314	None:intergenic
TAAATCTATACGCTCCAAAA+TGG	0.335742	8.3:-37027187	None:intergenic
CAGCGCAGTCTCACCTCTTA+TGG	0.353195	8.3:-37027517	None:intergenic
TCCAAGAAATGTTGGGAAAT+CGG	0.358425	8.3:+37029217	MS.gene69687:intron
TTCATAATTTCGGTGGCAAA+TGG	0.365858	8.3:-37027261	None:intergenic
TAGGGCTGAAATATGCAAAA+TGG	0.378232	8.3:-37027670	None:intergenic
TCATCAAAGACCAGAATTAG+AGG	0.384461	8.3:+37028999	MS.gene69687:CDS
TACCTGCAGCTCACTTCTTA+GGG	0.401355	8.3:-37027688	None:intergenic
ATTGAATACTTGACCATAAG+AGG	0.401389	8.3:+37027504	MS.gene69687:CDS
CTTCTACTCCAAGAAATGTT+GGG	0.407177	8.3:+37029210	MS.gene69687:intron
CAATCGGTTATCATTATTTG+TGG	0.423782	8.3:-37027103	None:intergenic
TCTTCTACTCCAAGAAATGT+TGG	0.437937	8.3:+37029209	MS.gene69687:intron
CCCTTAAAGTACTTGTTAGC+TGG	0.441660	8.3:+37027571	MS.gene69687:CDS
CCAGCTAACAAGTACTTTAA+GGG	0.442710	8.3:-37027571	None:intergenic
GTCAAGTATTCAATAGATTC+CGG	0.443534	8.3:-37027495	None:intergenic
ACGGAGAGGCGCTCAAAAGC+TGG	0.445719	8.3:+37027608	MS.gene69687:CDS
GTTGGGAAATCGGTCTTGTC+AGG	0.447653	8.3:+37029227	MS.gene69687:CDS
TGTAAAGGAGTTTCAACAAA+TGG	0.448723	8.3:-37027213	None:intergenic
TCTAATATACTCTTGATCTC+TGG	0.462110	8.3:-37028939	None:intergenic
AAATTTGAACTCAATGAACT+TGG	0.463199	8.3:+37028884	MS.gene69687:CDS
CTTGAGCTGCAACTTTCAAT+CGG	0.477960	8.3:-37027119	None:intergenic
TCATAATTTCGGTGGCAAAT+GGG	0.485094	8.3:-37027260	None:intergenic
TTTAGCTTCCATGCAAATGA+AGG	0.490376	8.3:-37027291	None:intergenic
ATTTAAAACCTTCATTTGCA+TGG	0.492498	8.3:+37027283	MS.gene69687:CDS
TGTACAGGCACTTCAATTGT+TGG	0.493166	8.3:+37028848	MS.gene69687:intron
TTACATATTGCTGCATCTAT+GGG	0.495030	8.3:+37027231	MS.gene69687:CDS
AATCGGTTATCATTATTTGT+GGG	0.501672	8.3:-37027102	None:intergenic
GCAACTGCGATCTATCAATC+AGG	0.505224	8.3:+37029104	MS.gene69687:CDS
CTCTTCCTTTAACTCTAACA+AGG	0.513638	8.3:-37027398	None:intergenic
TGTTAAGTACGAACAATATG+AGG	0.526462	8.3:+37027548	MS.gene69687:CDS
AGCCCTAAGAAGTGAGCTGC+AGG	0.528922	8.3:+37027686	MS.gene69687:CDS
CTTGGAGAGCAAAACAGCAT+TGG	0.540200	8.3:+37028902	MS.gene69687:CDS
TCTATACGCTCCAAAATGGA+TGG	0.544845	8.3:-37027183	None:intergenic
TTGAAAGTTGCAGCTCAAGC+AGG	0.548310	8.3:+37027123	MS.gene69687:CDS
CATAGCGAGATGGATGGGGC+TGG	0.551606	8.3:-37027325	None:intergenic
TTTGCATAGCGAGATGGATG+GGG	0.552573	8.3:-37027329	None:intergenic
ATAGATGCAGCAATATGTAA+AGG	0.555251	8.3:-37027228	None:intergenic
TTAAACAAGAGGGACGATGC+AGG	0.562233	8.3:+37027642	MS.gene69687:CDS
ATTTGACTTGCATAATGAAG+AGG	0.563135	8.3:-37027432	None:intergenic
TGGATGGGGCTGGATCCTTG+CGG	0.586497	8.3:-37027315	None:intergenic
CAGAGGAGAAGCGTAACACT+TGG	0.589311	8.3:+37029060	MS.gene69687:CDS
CTAACCTGATAAATTCCACC+AGG	0.595881	8.3:-37029137	None:intergenic
AAATGGAATATTAAACAAGA+GGG	0.596917	8.3:+37027632	MS.gene69687:CDS
CTTGAGCTTATGTGCAAGTG+TGG	0.611285	8.3:-37028976	None:intergenic
AAAATGGAATATTAAACAAG+AGG	0.615959	8.3:+37027631	MS.gene69687:CDS
TTATGCAAGTCAAATTGGTG+AGG	0.618646	8.3:+37027440	MS.gene69687:CDS
CATCTTGAATCACTGTGTAG+AGG	0.625838	8.3:-37027158	None:intergenic
GCATGGAAGCTAAACCCGCA+AGG	0.660983	8.3:+37027300	MS.gene69687:CDS
TTGAGCTTATGTGCAAGTGT+GGG	0.673038	8.3:-37028975	None:intergenic
GATTAGAGCAAATATGACAG+AGG	0.683809	8.3:+37029043	MS.gene69687:CDS
AACCTGATAAATTCCACCAG+GGG	0.693447	8.3:-37029135	None:intergenic
TAACCTGATAAATTCCACCA+GGG	0.695982	8.3:-37029136	None:intergenic
ACCTGATAAATTCCACCAGG+GGG	0.706697	8.3:-37029134	None:intergenic

CRISPR-GE

badsite warning	sgRNA_sequence	Strand	Position	Region	GC_content
!!!	ATTTTTTATGTTACATATTT+TGG	-	chr8.3:37028723-37028742	None:intergenic	10.0%
!!	AACAAAATCAACAAATTTAA+AGG	+	chr8.3:37028371-37028390	MS.gene69687:intron	15.0%
!!	ATTTAAAGGAAATATAGAAT+CGG	+	chr8.3:37028385-37028404	MS.gene69687:intron	15.0%
!!	ATTTCAGTAAATATCATATT+TGG	-	chr8.3:37027887-37027906	None:intergenic	15.0%
!!	GAAAAAAAAGAAATATAGAA+AGG	-	chr8.3:37027744-37027763	None:intergenic	15.0%
!!!	AGGTTTTAAATTCATAATTT+CGG	-	chr8.3:37027274-37027293	None:intergenic	15.0%
!!!	ATAAACATGGTTTTTATTTT+TGG	-	chr8.3:37027945-37027964	None:intergenic	15.0%
!!!	TTGAAATAATCTTATTTGAT+TGG	-	chr8.3:37028326-37028345	None:intergenic	15.0%
!!	AAAATGGAATATTAAACAAG+AGG	+	chr8.3:37027631-37027650	MS.gene69687:CDS	20.0%
!!	AAAATTCAAATGTTGTAAAG+AGG	+	chr8.3:37028344-37028363	MS.gene69687:intron	20.0%
!!	AAATATCCGTAAATTAAAAG+TGG	+	chr8.3:37028766-37028785	MS.gene69687:intron	20.0%
!!	AAATGGAATATTAAACAAGA+GGG	+	chr8.3:37027632-37027651	MS.gene69687:CDS	20.0%
!!	GTAATATGTCAACTTATTTA+AGG	+	chr8.3:37029021-37029040	MS.gene69687:CDS	20.0%
!!	TACAAATTTGTGAATTATCA+TGG	-	chr8.3:37028295-37028314	None:intergenic	20.0%
!!	TTAAATGAAGTTACTACTAA+GGG	-	chr8.3:37028545-37028564	None:intergenic	20.0%
!!!	AACTAACCACTTTTAATTTA+CGG	-	chr8.3:37028775-37028794	None:intergenic	20.0%
!!!	TGTGATTTTAGTTATTGAAT+AGG	-	chr8.3:37027716-37027735	None:intergenic	20.0%
!!!	TTTTAAATTCATAATTTCGG+TGG	-	chr8.3:37027271-37027290	None:intergenic	20.0%
!	AAAAGGAAATAGAAGATGAA+GGG	+	chr8.3:37028160-37028179	MS.gene69687:intron	25.0%
!	AAATTTGAACTCAATGAACT+TGG	+	chr8.3:37028884-37028903	MS.gene69687:CDS	25.0%
!	AATCGGTTATCATTATTTGT+GGG	-	chr8.3:37027105-37027124	None:intergenic	25.0%
!	AATCTCAAAATGACATATCT+CGG	+	chr8.3:37027985-37028004	MS.gene69687:intron	25.0%
!	CTAGTATTTGATTACGATTA+GGG	-	chr8.3:37028615-37028634	None:intergenic	25.0%
!	GTTAAATGAAGTTACTACTA+AGG	-	chr8.3:37028546-37028565	None:intergenic	25.0%
!	TAAAAGGAAATAGAAGATGA+AGG	+	chr8.3:37028159-37028178	MS.gene69687:intron	25.0%
!	TAGTATTTGATTACGATTAG+GGG	-	chr8.3:37028614-37028633	None:intergenic	25.0%
!	TGTATTGTTCATTAACTACT+TGG	+	chr8.3:37028820-37028839	MS.gene69687:intron	25.0%
!!	ATTTAAAACCTTCATTTGCA+TGG	+	chr8.3:37027283-37027302	MS.gene69687:CDS	25.0%
!!	TAGTTGACTTTGAATCTAAA+AGG	+	chr8.3:37028143-37028162	MS.gene69687:intron	25.0%
	AAAGACCTTGTTAGAGTTAA+AGG	+	chr8.3:37027393-37027412	MS.gene69687:CDS	30.0%
	AAAGGAAATAGAAGATGAAG+GGG	+	chr8.3:37028161-37028180	MS.gene69687:intron	30.0%
	AACAAGATGAAACTAGATCT+TGG	-	chr8.3:37028494-37028513	None:intergenic	30.0%
	AACAGATAGTTCATTTCCAT+AGG	+	chr8.3:37028563-37028582	MS.gene69687:intron	30.0%
	ACAGATAGTTCATTTCCATA+GGG	+	chr8.3:37028564-37028583	MS.gene69687:intron	30.0%
	AGTATTTGATTACGATTAGG+GGG	-	chr8.3:37028613-37028632	None:intergenic	30.0%
	ATAGAATCGGTATAGTTAGA+AGG	+	chr8.3:37028398-37028417	MS.gene69687:intron	30.0%
	ATAGATGCAGCAATATGTAA+AGG	-	chr8.3:37027231-37027250	None:intergenic	30.0%
	ATGACACAGGTTTATAAACA+TGG	-	chr8.3:37027958-37027977	None:intergenic	30.0%
	ATTGAATACTTGACCATAAG+AGG	+	chr8.3:37027504-37027523	MS.gene69687:CDS	30.0%
	CAATCGGTTATCATTATTTG+TGG	-	chr8.3:37027106-37027125	None:intergenic	30.0%
	CCTAATCGTAATCAAATACT+AGG	+	chr8.3:37028613-37028632	MS.gene69687:intron	30.0%
	CCTAGTATTTGATTACGATT+AGG	-	chr8.3:37028616-37028635	None:intergenic	30.0%
	CTCAAAAAAAATAAACGGAG+AGG	+	chr8.3:37027594-37027613	MS.gene69687:CDS	30.0%
	CTTCATTATGCAAGTCAAAT+TGG	+	chr8.3:37027435-37027454	MS.gene69687:CDS	30.0%
	GCAAAAAAACCAAAAACGTA+TGG	+	chr8.3:37027347-37027366	MS.gene69687:CDS	30.0%
	GTCAAGTATTCAATAGATTC+CGG	-	chr8.3:37027498-37027517	None:intergenic	30.0%
	TAAATCTATACGCTCCAAAA+TGG	-	chr8.3:37027190-37027209	None:intergenic	30.0%
	TCTAATATACTCTTGATCTC+TGG	-	chr8.3:37028942-37028961	None:intergenic	30.0%
	TGACATATTACCTCTAATTC+TGG	-	chr8.3:37029012-37029031	None:intergenic	30.0%
	TGTAAAGGAGTTTCAACAAA+TGG	-	chr8.3:37027216-37027235	None:intergenic	30.0%
	TGTTAAGTACGAACAATATG+AGG	+	chr8.3:37027548-37027567	MS.gene69687:CDS	30.0%
	TTACATATTGCTGCATCTAT+GGG	+	chr8.3:37027231-37027250	MS.gene69687:CDS	30.0%
	TTTACATATTGCTGCATCTA+TGG	+	chr8.3:37027230-37027249	MS.gene69687:CDS	30.0%
!	GCTGGCTCAAAAAAAATAAA+CGG	+	chr8.3:37027589-37027608	MS.gene69687:CDS	30.0%
!	GTTTTCCTGTGTGTATAAAT+TGG	-	chr8.3:37028073-37028092	None:intergenic	30.0%
!	TAAATTTCTCTTTTCGTGTC+CGG	+	chr8.3:37027476-37027495	MS.gene69687:CDS	30.0%
!!	AGTTTTGTCAATATGATTGC+CGG	-	chr8.3:37027823-37027842	None:intergenic	30.0%
!!	ATTTGACTTGCATAATGAAG+AGG	-	chr8.3:37027435-37027454	None:intergenic	30.0%
!!!	ATGTCATTTTGAGATTCTGT+CGG	-	chr8.3:37027981-37028000	None:intergenic	30.0%
!!!	GAAATGTGTTTTGAAAACCA+CGG	-	chr8.3:37028664-37028683	None:intergenic	30.0%
	AATGAAGTTACTACTAAGGG+AGG	-	chr8.3:37028542-37028561	None:intergenic	35.0%
	ACCATCCAATTTATACACAC+AGG	+	chr8.3:37028065-37028084	MS.gene69687:intron	35.0%
	CAGATAGTTCATTTCCATAG+GGG	+	chr8.3:37028565-37028584	MS.gene69687:intron	35.0%
	CCAGCTAACAAGTACTTTAA+GGG	-	chr8.3:37027574-37027593	None:intergenic	35.0%
	CTCTTCCTTTAACTCTAACA+AGG	-	chr8.3:37027401-37027420	None:intergenic	35.0%
	CTTCTACTCCAAGAAATGTT+GGG	+	chr8.3:37029210-37029229	MS.gene69687:intron	35.0%
	GATTAGAGCAAATATGACAG+AGG	+	chr8.3:37029043-37029062	MS.gene69687:CDS	35.0%
	TAACCTGATAAATTCCACCA+GGG	-	chr8.3:37029139-37029158	None:intergenic	35.0%
	TAGGGCTGAAATATGCAAAA+TGG	-	chr8.3:37027673-37027692	None:intergenic	35.0%
	TATCATGGTACACTTGATTG+AGG	-	chr8.3:37028280-37028299	None:intergenic	35.0%
	TCATAATTTCGGTGGCAAAT+GGG	-	chr8.3:37027263-37027282	None:intergenic	35.0%
	TCATCAAAGACCAGAATTAG+AGG	+	chr8.3:37028999-37029018	MS.gene69687:CDS	35.0%
	TCCAAGAAATGTTGGGAAAT+CGG	+	chr8.3:37029217-37029236	MS.gene69687:intron	35.0%
	TCCTGTGTGTATAAATTGGA+TGG	-	chr8.3:37028069-37028088	None:intergenic	35.0%
	TCTTCTACTCCAAGAAATGT+TGG	+	chr8.3:37029209-37029228	MS.gene69687:intron	35.0%
	TGTGTATCTGCAACTATTGA+TGG	-	chr8.3:37028044-37028063	None:intergenic	35.0%
	TTATGCAAGTCAAATTGGTG+AGG	+	chr8.3:37027440-37027459	MS.gene69687:CDS	35.0%
	TTCATAATTTCGGTGGCAAA+TGG	-	chr8.3:37027264-37027283	None:intergenic	35.0%
!	AGATCTATGAGTCACTCTTT+TGG	-	chr8.3:37028098-37028117	None:intergenic	35.0%
!	TCAAGATGATCCATCCATTT+TGG	+	chr8.3:37027173-37027192	MS.gene69687:CDS	35.0%
!	TCGGTCACGATTTGAATTTT+GGG	-	chr8.3:37027777-37027796	None:intergenic	35.0%
!	TTTAGCTTCCATGCAAATGA+AGG	-	chr8.3:37027294-37027313	None:intergenic	35.0%
	AACCTGATAAATTCCACCAG+GGG	-	chr8.3:37029138-37029157	None:intergenic	40.0%
	ATCAAATACTAGGTGCATCG+TGG	+	chr8.3:37028623-37028642	MS.gene69687:intron	40.0%
	CATCTTGAATCACTGTGTAG+AGG	-	chr8.3:37027161-37027180	None:intergenic	40.0%
	CGAACTAAAACATCCTAGTC+CGG	+	chr8.3:37027801-37027820	MS.gene69687:intron	40.0%
	CTAACCTGATAAATTCCACC+AGG	-	chr8.3:37029140-37029159	None:intergenic	40.0%
	CTTGAGCTGCAACTTTCAAT+CGG	-	chr8.3:37027122-37027141	None:intergenic	40.0%
	GCCAGCTAACAAGTACTTTA+AGG	-	chr8.3:37027575-37027594	None:intergenic	40.0%
	GGAATTTATCAGGTTAGTGC+TGG	+	chr8.3:37029143-37029162	MS.gene69687:intron	40.0%
	TCTATACGCTCCAAAATGGA+TGG	-	chr8.3:37027186-37027205	None:intergenic	40.0%
	TGTACAGGCACTTCAATTGT+TGG	+	chr8.3:37028848-37028867	MS.gene69687:intron	40.0%
	TTGAGCTTATGTGCAAGTGT+GGG	-	chr8.3:37028978-37028997	None:intergenic	40.0%
!	AACTACTTGGTAGCATGTAC+AGG	+	chr8.3:37028833-37028852	MS.gene69687:intron	40.0%
!	ACCGATTTCCCAACATTTCT+TGG	-	chr8.3:37029221-37029240	None:intergenic	40.0%
!	AGCGATACACCATACGTTTT+TGG	-	chr8.3:37027359-37027378	None:intergenic	40.0%
!	CCCTTAAAGTACTTGTTAGC+TGG	+	chr8.3:37027571-37027590	MS.gene69687:CDS	40.0%
!	GTCGGTCACGATTTGAATTT+TGG	-	chr8.3:37027778-37027797	None:intergenic	40.0%
!	TTTTGCATAGCGAGATGGAT+GGG	-	chr8.3:37027333-37027352	None:intergenic	40.0%
!	TTTTTGCATAGCGAGATGGA+TGG	-	chr8.3:37027334-37027353	None:intergenic	40.0%
!!	AGTGCTGGTGATGACAATAA+TGG	+	chr8.3:37029158-37029177	MS.gene69687:intron	40.0%
!!	TAAGTCACAAAGACTTGGTG+AGG	+	chr8.3:37028184-37028203	MS.gene69687:intron	40.0%
!!!	GGTTTTTTTGCATAGCGAGA+TGG	-	chr8.3:37027338-37027357	None:intergenic	40.0%
	AACAACCATCACCCACTAGA+AGG	+	chr8.3:37028211-37028230	MS.gene69687:intron	45.0%
	ACAACCATCACCCACTAGAA+GGG	+	chr8.3:37028212-37028231	MS.gene69687:intron	45.0%
	ACCTGATAAATTCCACCAGG+GGG	-	chr8.3:37029137-37029156	None:intergenic	45.0%
	AGGGGTAAGTCACAAAGACT+TGG	+	chr8.3:37028179-37028198	MS.gene69687:intron	45.0%
	ATAGGGGTGACTCCATCTAA+CGG	+	chr8.3:37028581-37028600	MS.gene69687:intron	45.0%
	CTTGAGCTTATGTGCAAGTG+TGG	-	chr8.3:37028979-37028998	None:intergenic	45.0%
	CTTGGAGAGCAAAACAGCAT+TGG	+	chr8.3:37028902-37028921	MS.gene69687:CDS	45.0%
	GCAACTGCGATCTATCAATC+AGG	+	chr8.3:37029104-37029123	MS.gene69687:CDS	45.0%
	GGTCGTCGTTATTATAACCG+TGG	+	chr8.3:37028644-37028663	MS.gene69687:intron	45.0%
	GTCAATATGATTGCCGGACT+AGG	-	chr8.3:37027817-37027836	None:intergenic	45.0%
	TACCTGCAGCTCACTTCTTA+GGG	-	chr8.3:37027691-37027710	None:intergenic	45.0%
	TACTAAGGGAGGTCACTCTT+TGG	-	chr8.3:37028531-37028550	None:intergenic	45.0%
	TTAAACAAGAGGGACGATGC+AGG	+	chr8.3:37027642-37027661	MS.gene69687:CDS	45.0%
	TTACCTGCAGCTCACTTCTT+AGG	-	chr8.3:37027692-37027711	None:intergenic	45.0%
	TTGAAAGTTGCAGCTCAAGC+AGG	+	chr8.3:37027123-37027142	MS.gene69687:CDS	45.0%
	TTGTGCGTTTCCCTTCTAGT+GGG	-	chr8.3:37028225-37028244	None:intergenic	45.0%
	TTTGCATAGCGAGATGGATG+GGG	-	chr8.3:37027332-37027351	None:intergenic	45.0%
!!!	GGATGTTTTAGTTCGTGCGT+CGG	-	chr8.3:37027796-37027815	None:intergenic	45.0%
	CACTAGAAGGGAAACGCACA+AGG	+	chr8.3:37028224-37028243	MS.gene69687:intron	50.0%
	CTTGTGCGTTTCCCTTCTAG+TGG	-	chr8.3:37028226-37028245	None:intergenic	50.0%
	GAGATTCTGTCGGATGACAC+AGG	-	chr8.3:37027971-37027990	None:intergenic	50.0%
	GGCGCTCAAAAGCTGGAAAA+TGG	+	chr8.3:37027615-37027634	MS.gene69687:CDS	50.0%
	GTTAGATGGAGTCACCCCTA+TGG	-	chr8.3:37028582-37028601	None:intergenic	50.0%
	TAAGGGAGGTCACTCTTTGG+AGG	-	chr8.3:37028528-37028547	None:intergenic	50.0%
	TAGGGGTGACTCCATCTAAC+GGG	+	chr8.3:37028582-37028601	MS.gene69687:intron	50.0%
	TCCCCCTGGTGGAATTTATC+AGG	+	chr8.3:37029133-37029152	MS.gene69687:CDS	50.0%
!	CAGAGGAGAAGCGTAACACT+TGG	+	chr8.3:37029060-37029079	MS.gene69687:CDS	50.0%
!	GTTGGGAAATCGGTCTTGTC+AGG	+	chr8.3:37029227-37029246	MS.gene69687:CDS	50.0%
!	GTTTCCCTTCTAGTGGGTGA+TGG	-	chr8.3:37028219-37028238	None:intergenic	50.0%
	AGCCCTAAGAAGTGAGCTGC+AGG	+	chr8.3:37027686-37027705	MS.gene69687:CDS	55.0%
	AGGGGGAGTTACCCGTTAGA+TGG	-	chr8.3:37028596-37028615	None:intergenic	55.0%
	CAATCAGGATTGAGTCCCCC+TGG	+	chr8.3:37029119-37029138	MS.gene69687:CDS	55.0%
	CAGCGCAGTCTCACCTCTTA+TGG	-	chr8.3:37027520-37027539	None:intergenic	55.0%
	GCATGGAAGCTAAACCCGCA+AGG	+	chr8.3:37027300-37027319	MS.gene69687:CDS	55.0%
	CATAGCGAGATGGATGGGGC+TGG	-	chr8.3:37027328-37027347	None:intergenic	60.0%
	TCAGGATTGAGTCCCCCTGG+TGG	+	chr8.3:37029122-37029141	MS.gene69687:CDS	60.0%
	TGGATGGGGCTGGATCCTTG+CGG	-	chr8.3:37027318-37027337	None:intergenic	60.0%
!!	ACGGAGAGGCGCTCAAAAGC+TGG	+	chr8.3:37027608-37027627	MS.gene69687:CDS	60.0%
	GGATGGGGCTGGATCCTTGC+GGG	-	chr8.3:37027317-37027336	None:intergenic	65.0%

Chromosome	Type	Strat	End	Strand	Name
chr8.3	gene	37027096	37029255	37027096	ID=MS.gene69687
chr8.3	mRNA	37027096	37029255	37027096	ID=MS.gene69687.t1;Parent=MS.gene69687
chr8.3	exon	37027096	37027707	37027096	ID=MS.gene69687.t1.exon1;Parent=MS.gene69687.t1
chr8.3	CDS	37027096	37027707	37027096	ID=cds.MS.gene69687.t1;Parent=MS.gene69687.t1
chr8.3	exon	37028855	37029154	37028855	ID=MS.gene69687.t1.exon2;Parent=MS.gene69687.t1
chr8.3	CDS	37028855	37029154	37028855	ID=cds.MS.gene69687.t1;Parent=MS.gene69687.t1
chr8.3	exon	37029223	37029255	37029223	ID=MS.gene69687.t1.exon3;Parent=MS.gene69687.t1
chr8.3	CDS	37029223	37029255	37029223	ID=cds.MS.gene69687.t1;Parent=MS.gene69687.t1

Gene Sequence

>MS.gene69687

ATGAATCCCACAAATAATGATAACCGATTGAAAGTTGCAGCTCAAGCAGGTGATATAGATCTCCTCTACACAGTGATTCAAGATGATCCATCCATTTTGGAGCGTATAGATTTAATACCATTTGTTGAAACTCCTTTACATATTGCTGCATCTATGGGTCATCTCCCATTTGCCACCGAAATTATGAATTTAAAACCTTCATTTGCATGGAAGCTAAACCCGCAAGGATCCAGCCCCATCCATCTCGCTATGCAAAAAAACCAAAAACGTATGGTGTATCGCTTTGTGAACATCAATAAAGACCTTGTTAGAGTTAAAGGAAGAGAATGCTTTACTCCTCTTCATTATGCAAGTCAAATTGGTGAGGTTGATCTTTTAACTAAATTTCTCTTTTCGTGTCCGGAATCTATTGAATACTTGACCATAAGAGGTGAGACTGCGCTGCATATTGCTGTTAAGTACGAACAATATGAGGCCCTTAAAGTACTTGTTAGCTGGCTCAAAAAAAATAAACGGAGAGGCGCTCAAAAGCTGGAAAATGGAATATTAAACAAGAGGGACGATGCAGGCAACACCATTTTGCATATTTCAGCCCTAAGAAGTGAGCTGCAGGTAATCCTATTCAATAACTAAAATCACATGTCTCCTTTCTATATTTCTTTTTTTTCTCTATCATGACCCAAAATTCAAATCGTGACCGACGCACGAACTAAAACATCCTAGTCCGGCAATCATATTGACAAAACTTGACAACTATCATTAATCAATTCTGAACTTGATTTTCACTTCCAAATATGATATTTACTGAAATTTCGACAGAGTATCTTTTGCATTTTTTAACATTTTCCAAAAATAAAAACCATGTTTATAAACCTGTGTCATCCGACAGAATCTCAAAATGACATATCTCGGTGTTTGTACAACTCAAAATAAAAAATGACTAGACCATCAATAGTTGCAGATACACAAACCATCCAATTTATACACACAGGAAAACTACCAAAAGAGTGACTCATAGATCTTTAACTCTAATAGAAGTTTTCTACGTAGTTGACTTTGAATCTAAAAGGAAATAGAAGATGAAGGGGTAAGTCACAAAGACTTGGTGAGGAGACAACAACCATCACCCACTAGAAGGGAAACGCACAAGGACACGAATAGTTATATTTTTCAAATCTAATCCTCAATCAAGTGTACCATGATAATTCACAAATTTGTACACTTTATCCAATCAAATAAGATTATTTCAAAATTCAAATGTTGTAAAGAGGTAAAAACAAAATCAACAAATTTAAAGGAAATATAGAATCGGTATAGTTAGAAGGATTCAAAATAATGAACTTCAACGAAAATATATAAATCTAACTTTAGTGAAAATGAAATACAATGATAAAACCAAGATCTAGTTTCATCTTGTTGATATCTCTTTCCTCCAAAGAGTGACCTCCCTTAGTAGTAACTTCATTTAACAGATAGTTCATTTCCATAGGGGTGACTCCATCTAACGGGTAACTCCCCCTAATCGTAATCAAATACTAGGTGCATCGTGGTCGTCGTTATTATAACCGTGGTTTTCAAAACACATTTCTCAAAACACATCTTACACAACATATCGAAACATATGCCAAAATATGTAACATAAAAAATGATTTGAAAGTCTACTACTTTATAAATATCCGTAAATTAAAAGTGGTTAGTTGCTAACGTGAATGTTCTCTAACAAATGTATTGTTCATTAACTACTTGGTAGCATGTACAGGCACTTCAATTGTTGGTAGAGACTAATATAAATTTGAACTCAATGAACTTGGAGAGCAAAACAGCATTGGACATAGCAAGCACTCCAGAGATCAAGAGTATATTAGAAGTCGCTGATGCTCCCACACTTGCACATAAGCTCAAGTCATCAAAGACCAGAATTAGAGGTAATATGTCAACTTATTTAAGGATTAGAGCAAATATGACAGAGGAGAAGCGTAACACTTGGTTGATAGTTGCGACTCTTGTTGCAACTGCGATCTATCAATCAGGATTGAGTCCCCCTGGTGGAATTTATCAGGTTAGTGCTGGTGATGACAATAATGGTGTGAACATTTTCTCAAATTCTACTATTTCTTCTACTCCAAGAAATGTTGGGAAATCGGTCTTGTCAGGATATGA

Protein sequence

>MS.gene69687.t1

MNPTNNDNRLKVAAQAGDIDLLYTVIQDDPSILERIDLIPFVETPLHIAASMGHLPFATEIMNLKPSFAWKLNPQGSSPIHLAMQKNQKRMVYRFVNINKDLVRVKGRECFTPLHYASQIGEVDLLTKFLFSCPESIEYLTIRGETALHIAVKYEQYEALKVLVSWLKKNKRRGAQKLENGILNKRDDAGNTILHISALRSELQALQLLVETNINLNSMNLESKTALDIASTPEIKSILEVADAPTLAHKLKSSKTRIRGNMSTYLRIRANMTEEKRNTWLIVATLVATAIYQSGLSPPGGIYQKCWEIGLVRI