AlfalfaGEDB | MS.gene69965

M. sativa cultivar XinJiangDaYe / MS.gene69965

KEGG: -
GO: GO:0003674 GO:0005488 GO:0005515
PFAM: PF12796.10 PF13962.9

Nr:

Query id	Subject id	identity %	alignment length	mismatches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
MS.gene69965.t1	RHN41843.1	79	348	65	2	1	346	1	342	1.30E-104	389.8

Swissprot:

Query id	Subject id	identity %	alignment length	mismatches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
MS.gene69965.t1	Q8GYH5	42.0	305	168	3	6	303	2	304	5.0e-20	100.1

Trembl:

Query id	Subject id	identity %	alignment length	mismatches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
MS.gene69965.t1	G7L8Q1	79.0	348	65	2	1	346	1	342	9.5e-105	389.8

TFs/TRs:

Gene ID	Type	Classification

Protein Kinases:

Gene ID	Type	Classification

Network:

Co-expression Network:

Gene1	Gene2	correlation coefficient	p_value	FDR

PPI:

Gene1	Gene2	Type
MS.gene69965	MS.gene30176	PPI
MS.gene69965	MS.gene041770	PPI
MS.gene47479	MS.gene69965	PPI
MS.gene69965	MS.gene81055	PPI
MS.gene69965	MS.gene99554	PPI
MS.gene69965	MS.gene80163	PPI
MS.gene69965	MS.gene02469	PPI
MS.gene69965	MS.gene33377	PPI
MS.gene69965	MS.gene024753	PPI
MS.gene69965	MS.gene045937	PPI
MS.gene69965	MS.gene51278	PPI
MS.gene69965	MS.gene69966	PPI
MS.gene69965	MS.gene87218	PPI
MS.gene69965	MS.gene85534	PPI
MS.gene69965	MS.gene23881	PPI
MS.gene69965	MS.gene066501	PPI
MS.gene056455	MS.gene69965	PPI
MS.gene69965	MS.gene062662	PPI
MS.gene69965	MS.gene97379	PPI
MS.gene69965	MS.gene21734	PPI
MS.gene69965	MS.gene30177	PPI
MS.gene69965	MS.gene70008	PPI
MS.gene69965	MS.gene008767	PPI
MS.gene69965	MS.gene008833	PPI
MS.gene69965	MS.gene36842	PPI
MS.gene69965	MS.gene67157	PPI
MS.gene69965	MS.gene23811	PPI
MS.gene69965	MS.gene071113	PPI
MS.gene69965	MS.gene90400	PPI
MS.gene69965	MS.gene25244	PPI
MS.gene69965	MS.gene82740	PPI
MS.gene69965	MS.gene48655	PPI
MS.gene69965	MS.gene09785	PPI
MS.gene69965	MS.gene64441	PPI
MS.gene69965	MS.gene066046	PPI
MS.gene69965	MS.gene007486	PPI
MS.gene69965	MS.gene035805	PPI
MS.gene69965	MS.gene23810	PPI
MS.gene69965	MS.gene51335	PPI
MS.gene30172	MS.gene69965	PPI
MS.gene69965	MS.gene027073	PPI
MS.gene69965	MS.gene027072	PPI
MS.gene69965	MS.gene65463	PPI
MS.gene69965	MS.gene007485	PPI
MS.gene23852	MS.gene69965	PPI
MS.gene69965	MS.gene23196	PPI
MS.gene69965	MS.gene039682	PPI
MS.gene69965	MS.gene067705	PPI
MS.gene69965	MS.gene71204	PPI
MS.gene69965	MS.gene025229	PPI
MS.gene69965	MS.gene65775	PPI
MS.gene69965	MS.gene30433	PPI
MS.gene69965	MS.gene043742	PPI
MS.gene69965	MS.gene027075	PPI
MS.gene69965	MS.gene027441	PPI
MS.gene69965	MS.gene050457	PPI
MS.gene063222	MS.gene69965	PPI
MS.gene69965	MS.gene99973	PPI
MS.gene69965	MS.gene30174	PPI
MS.gene69687	MS.gene69965	PPI
MS.gene69965	MS.gene064542	PPI
MS.gene69965	MS.gene91775	PPI
MS.gene69965	MS.gene051003	PPI
MS.gene69965	MS.gene25515	PPI
MS.gene69965	MS.gene056455	PPI
MS.gene69965	MS.gene89986	PPI
MS.gene78281	MS.gene69965	PPI
MS.gene69965	MS.gene78281	PPI
MS.gene69965	MS.gene050270	PPI
MS.gene69965	MS.gene08470	PPI
MS.gene69965	MS.gene34712	PPI
MS.gene69965	MS.gene058128	PPI
MS.gene69965	MS.gene018518	PPI
MS.gene69965	MS.gene007487	PPI
MS.gene69965	MS.gene065848	PPI
MS.gene69965	MS.gene037184	PPI
MS.gene027071	MS.gene69965	PPI
MS.gene69965	MS.gene004844	PPI
MS.gene69965	MS.gene068249	PPI
MS.gene69965	MS.gene99588	PPI
MS.gene69965	MS.gene005995	PPI
MS.gene69965	MS.gene54764	PPI
MS.gene69965	MS.gene24806	PPI
MS.gene69965	MS.gene038519	PPI
MS.gene69965	MS.gene41291	PPI
MS.gene69965	MS.gene27223	PPI
MS.gene69965	MS.gene042783	PPI
MS.gene010910	MS.gene69965	PPI
MS.gene69965	MS.gene97943	PPI
MS.gene69965	MS.gene050272	PPI
MS.gene69965	MS.gene63085	PPI
MS.gene69965	MS.gene26021	PPI
MS.gene69965	MS.gene69687	PPI
MS.gene69965	MS.gene26532	PPI
MS.gene69965	MS.gene050456	PPI
MS.gene010912	MS.gene69965	PPI
MS.gene69965	MS.gene51258	PPI
MS.gene69965	MS.gene32723	PPI
MS.gene69965	MS.gene010910	PPI
MS.gene69965	MS.gene053363	PPI
MS.gene69965	MS.gene066467	PPI
MS.gene69965	MS.gene34651	PPI
MS.gene69965	MS.gene32726	PPI
MS.gene69965	MS.gene71122	PPI
MS.gene69965	MS.gene22482	PPI
MS.gene69965	MS.gene24922	PPI
MS.gene69965	MS.gene052956	PPI
MS.gene69965	MS.gene60920	PPI
MS.gene69965	MS.gene73119	PPI
MS.gene69965	MS.gene92243	PPI
MS.gene69965	MS.gene037950	PPI
MS.gene69965	MS.gene027074	PPI
MS.gene69965	MS.gene34009	PPI
MS.gene69965	MS.gene51262	PPI
MS.gene69965	MS.gene26672	PPI
MS.gene69965	MS.gene043662	PPI
MS.gene69965	MS.gene061932	PPI
MS.gene69965	MS.gene014931	PPI
MS.gene69965	MS.gene21888	PPI
MS.gene69965	MS.gene066500	PPI
MS.gene69965	MS.gene23852	PPI
MS.gene69965	MS.gene39623	PPI
MS.gene69965	MS.gene066464	PPI
MS.gene69965	MS.gene07706	PPI
MS.gene69965	MS.gene25024	PPI
MS.gene69965	MS.gene012203	PPI
MS.gene69965	MS.gene26019	PPI
MS.gene69965	MS.gene022109	PPI
MS.gene039682	MS.gene69965	PPI

Query id	Subject id	identity %	alignment length	mismatches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
MS.gene69965.t1	MTR_8g073260	84.483	348	46	2	1	346	1	342	0.0	600
MS.gene69965.t1	MTR_8g073275	68.245	359	41	5	51	346	1	349	2.18e-161	459
MS.gene69965.t1	MTR_3g016210	61.236	356	126	2	1	344	1	356	1.40e-154	442
MS.gene69965.t1	MTR_8g072510	61.272	346	129	3	1	345	1	342	5.49e-149	427
MS.gene69965.t1	MTR_1g059930	65.815	313	107	0	7	319	10	322	2.32e-148	426
MS.gene69965.t1	MTR_8g039620	62.500	344	122	3	5	345	10	349	8.06e-148	424
MS.gene69965.t1	MTR_7g451420	65.079	315	110	0	1	315	1	315	5.06e-145	412
MS.gene69965.t1	MTR_7g021090	57.558	344	137	3	1	344	1	335	1.81e-135	392
MS.gene69965.t1	MTR_8g062410	59.654	347	128	6	1	345	1	337	1.59e-129	378
MS.gene69965.t1	MTR_8g068990	56.725	342	127	5	7	345	10	333	1.91e-127	373
MS.gene69965.t1	MTR_8g069880	58.140	344	138	4	5	347	3	341	3.38e-127	373
MS.gene69965.t1	MTR_8g467780	58.125	320	124	1	12	321	14	333	1.97e-124	365
MS.gene69965.t1	MTR_8g066670	59.249	346	135	4	1	345	1067	1407	2.41e-124	390
MS.gene69965.t1	MTR_3g105650	56.270	311	128	2	6	309	2	311	2.00e-119	352
MS.gene69965.t1	MTR_8g040930	57.525	299	120	2	51	346	1	295	2.41e-115	339
MS.gene69965.t1	MTR_8g041240	57.525	299	120	2	51	346	1	295	2.41e-115	339
MS.gene69965.t1	MTR_1g069110	27.701	361	216	10	6	347	12	346	1.06e-28	115
MS.gene69965.t1	MTR_7g099580	26.706	337	169	10	12	331	15	290	1.83e-23	99.8
MS.gene69965.t1	MTR_2g101320	29.545	220	133	4	37	246	134	341	1.10e-20	93.6
MS.gene69965.t1	MTR_7g099570	27.451	204	134	3	12	210	12	206	9.74e-17	81.6
MS.gene69965.t1	MTR_1g115575	25.685	292	176	6	44	309	169	445	4.55e-16	79.7
MS.gene69965.t1	MTR_2g096190	25.460	326	171	9	7	308	103	380	9.91e-16	78.6
MS.gene69965.t1	MTR_2g101310	26.957	230	142	4	40	257	137	352	1.11e-15	78.2
MS.gene69965.t1	MTR_7g100430	24.289	387	213	14	5	322	68	443	1.67e-15	77.8
MS.gene69965.t1	MTR_2g101310	26.957	230	142	4	40	257	137	352	1.68e-15	78.2
MS.gene69965.t1	MTR_7g117620	25.436	287	180	6	44	308	119	393	3.77e-15	76.6
MS.gene69965.t1	MTR_1g032100	24.843	318	186	9	45	329	95	392	4.82e-14	73.6
MS.gene69965.t1	MTR_4g062100	26.380	163	118	1	7	169	107	267	1.24e-12	69.3
MS.gene69965.t1	MTR_7g100390	24.545	330	213	9	2	308	46	362	7.58e-12	66.6
MS.gene69965.t1	MTR_8g105260	24.483	290	182	6	44	308	101	378	2.09e-11	65.5

Query id	Subject id	identity %	alignment length	mismatches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
MS.gene69965.t1	AT4G10720	44.720	322	170	2	6	319	2	323	1.28e-92	283
MS.gene69965.t1	AT4G10720	43.402	341	179	3	6	338	2	336	1.74e-92	283
MS.gene69965.t1	AT1G14500	41.139	316	177	2	6	312	2	317	1.03e-81	255
MS.gene69965.t1	AT1G14480	40.491	326	182	3	6	321	2	325	5.40e-77	243
MS.gene69965.t1	AT5G15500	43.131	313	170	3	12	316	9	321	6.68e-77	244
MS.gene69965.t1	AT5G54620	41.853	313	165	6	6	306	2	309	6.66e-74	235
MS.gene69965.t1	AT5G54610	39.344	305	176	3	6	303	2	304	1.68e-71	229
MS.gene69965.t1	AT1G14480	35.583	326	155	4	6	321	2	282	1.96e-58	194
MS.gene69965.t1	AT5G51160	30.824	279	161	6	59	315	33	301	1.75e-36	137
MS.gene69965.t1	AT5G15500	38.140	215	125	3	110	316	1	215	4.68e-36	134
MS.gene69965.t1	AT1G10340	23.445	418	216	9	5	328	37	444	2.04e-17	84.0
MS.gene69965.t1	AT3G09550	25.915	328	193	10	12	309	150	457	9.75e-17	81.6
MS.gene69965.t1	AT3G09550	25.915	328	193	10	12	309	150	457	9.75e-17	81.6
MS.gene69965.t1	AT3G09550	25.915	328	193	10	12	309	157	464	1.10e-16	81.6
MS.gene69965.t1	AT1G10340	25.126	398	210	11	2	328	68	448	1.29e-16	81.3
MS.gene69965.t1	AT5G54700	30.085	236	127	8	95	326	17	218	2.60e-16	79.3
MS.gene69965.t1	AT5G54710	28.916	249	130	9	95	312	219	451	6.60e-16	79.3
MS.gene69965.t1	AT5G54710	28.916	249	130	9	95	312	264	496	1.02e-15	78.6
MS.gene69965.t1	AT5G02620	25.773	291	177	6	45	308	95	373	7.58e-15	75.9
MS.gene69965.t1	AT5G02620	25.773	291	177	6	45	308	95	373	7.58e-15	75.9
MS.gene69965.t1	AT5G02620	25.773	291	177	6	45	308	95	373	7.58e-15	75.9
MS.gene69965.t1	AT2G24600	24.808	391	220	13	2	328	68	448	1.38e-14	75.1
MS.gene69965.t1	AT2G24600	24.808	391	220	13	2	328	68	448	1.38e-14	75.1
MS.gene69965.t1	AT2G24600	25.067	375	207	13	2	312	68	432	4.72e-14	73.6
MS.gene69965.t1	AT2G24600	25.067	375	207	13	2	312	68	432	4.72e-14	73.6
MS.gene69965.t1	AT1G34050	24.444	270	162	7	65	312	174	423	1.02e-13	72.4
MS.gene69965.t1	AT2G01680	23.226	310	201	5	44	328	97	394	1.36e-13	72.0
MS.gene69965.t1	AT4G03500	23.794	311	168	9	43	309	217	502	1.50e-13	72.0
MS.gene69965.t1	AT4G03500	23.794	311	168	9	43	309	194	479	1.56e-13	72.0
MS.gene69965.t1	AT4G03500	23.794	311	168	9	43	309	194	479	1.56e-13	72.0
MS.gene69965.t1	AT5G54700	26.384	307	151	10	24	326	20	255	2.71e-13	71.2
MS.gene69965.t1	AT3G12360	22.739	387	200	12	5	309	62	431	4.81e-13	70.5
MS.gene69965.t1	AT3G12360	22.739	387	200	12	5	309	74	443	4.92e-13	70.5
MS.gene69965.t1	AT5G50140	26.829	205	124	5	40	228	26	220	8.85e-13	69.7
MS.gene69965.t1	AT4G03490	28.112	249	142	10	88	325	258	480	9.13e-13	69.7
MS.gene69965.t1	AT4G03490	28.112	249	142	10	88	325	258	480	9.32e-13	69.7
MS.gene69965.t1	AT4G03490	28.112	249	142	10	88	325	248	470	9.73e-13	69.7
MS.gene69965.t1	AT5G60070	22.772	303	211	6	7	308	110	390	1.08e-12	69.3
MS.gene69965.t1	AT1G05640	25.087	287	181	6	44	308	191	465	3.39e-12	68.2
MS.gene69965.t1	AT2G31820	24.390	287	183	6	44	308	227	501	4.87e-12	67.4
MS.gene69965.t1	AT4G03460	26.786	224	128	7	102	314	292	490	8.59e-12	66.6
MS.gene69965.t1	AT4G03460	26.293	232	135	7	94	314	252	458	9.47e-12	66.6
MS.gene69965.t1	AT4G11000	34.694	147	74	6	205	338	1	138	4.93e-11	62.8
MS.gene69965.t1	AT5G02620	24.204	314	176	7	45	308	95	396	8.22e-11	63.5
MS.gene69965.t1	AT5G02620	24.204	314	176	7	45	308	95	396	8.22e-11	63.5

Find 63 sgRNAs with CRISPR-Local

Find 147 sgRNAs with CRISPR-GE

CRISPR-Local

CRISPR-Local
sgRNA_sequence	on_target_score	Position	Region
AAGATCAAATGTCACATTTA+TGG	0.143970	8.1:+32435640	MS.gene69965:CDS
AAGGAACTTGTTAGAATTAA+AGG	0.165742	8.1:+32434486	MS.gene69965:CDS
GTAACATCTTCAATTGAATT+TGG	0.189718	8.1:-32434588	None:intergenic
CTTCATATTGCTTGCCAAAA+TGG	0.190947	8.1:+32434528	MS.gene69965:CDS
TTGAATTTGGACAAACAAAT+AGG	0.274665	8.1:-32434575	None:intergenic
TGAGGAGGATCCATATGTTT+TGG	0.280435	8.1:+32434266	MS.gene69965:CDS
TCGATTTGTAGACATGAATA+AGG	0.306644	8.1:+32434467	MS.gene69965:CDS
ATCGAAGCACCATACTCTTT+TGG	0.329979	8.1:-32434449	None:intergenic
CTCTTCATGTGTTGGTTGGT+TGG	0.373535	8.1:+32434664	MS.gene69965:CDS
CTAACTCCCTAGCACCTCTT+TGG	0.374660	8.1:-32434701	None:intergenic
TCTTAATTTATCTTCAAGTT+TGG	0.379601	8.1:-32435621	None:intergenic
CCGCTTTACCAACATATTCA+TGG	0.383859	8.1:-32435868	None:intergenic
TTGACCCCAAGTGGGTCAAT+AGG	0.389146	8.1:+32435971	MS.gene69965:intron
AGCAGCAAGTGCAGAGATCA+AGG	0.392720	8.1:+32435547	MS.gene69965:CDS
TCTATATATTCCAAAACATA+TGG	0.396171	8.1:-32434276	None:intergenic
GCAAAACAACCAAAAGAGTA+TGG	0.398876	8.1:+32434440	MS.gene69965:CDS
TTCACAGGCACTTCAATTGT+TGG	0.420014	8.1:+32435466	MS.gene69965:intron
CGCTTTACCAACATATTCAT+GGG	0.420928	8.1:-32435867	None:intergenic
TGTAGAGGAGTTTCAACAAA+TGG	0.445043	8.1:-32434306	None:intergenic
GAAATTAACACTCAACTGTA+TGG	0.449483	8.1:+32434725	MS.gene69965:CDS
CATAGTTGCATTAGAATTCA+AGG	0.451961	8.1:-32435843	None:intergenic
TCTACATATAGCTGCATCAA+TGG	0.456263	8.1:+32434323	MS.gene69965:CDS
GAAGCTCTTCATGTGTTGGT+TGG	0.480626	8.1:+32434660	MS.gene69965:CDS
TGCATTAGAATTCAAGGAAG+TGG	0.485297	8.1:-32435837	None:intergenic
TCTTCTCTATACTTTAATTG+AGG	0.489623	8.1:+32434248	MS.gene69965:CDS
GGTAAAGCGGTTATAAATGA+AGG	0.499284	8.1:+32435881	MS.gene69965:CDS
TTTAGCTTCCATGCAAATGT+AGG	0.500170	8.1:-32434384	None:intergenic
ACTCAACTGTATGGATGAGA+TGG	0.503634	8.1:+32434734	MS.gene69965:CDS
TCAATCAGCACTGAGTCCCC+CGG	0.508837	8.1:+32435763	MS.gene69965:CDS
CTACATATAGCTGCATCAAT+GGG	0.510700	8.1:+32434324	MS.gene69965:CDS
GTTAGAATTAAAGGAAGGGA+AGG	0.516481	8.1:+32434495	MS.gene69965:CDS
TTTCAATCTCATAATTTCAG+TGG	0.522090	8.1:-32434361	None:intergenic
TCTCTATACTTTAATTGAGG+AGG	0.522451	8.1:+32434251	MS.gene69965:CDS
ATCTCTAAACAATGACTCAA+AGG	0.522526	8.1:+32434779	MS.gene69965:CDS
AACTTGTTAGAATTAAAGGA+AGG	0.522538	8.1:+32434490	MS.gene69965:CDS
AAGGGTATATTACTAAGTGC+TGG	0.522957	8.1:+32435566	MS.gene69965:CDS
CAAATCGCCAAAGAGGTGCT+AGG	0.545825	8.1:+32434694	MS.gene69965:CDS
CAAATAGGAAATTAGCTACA+AGG	0.562537	8.1:-32434560	None:intergenic
GTTTGAAGCTCTTCATGTGT+TGG	0.565570	8.1:+32434656	MS.gene69965:CDS
GATTGAAACCTACATTTGCA+TGG	0.566368	8.1:+32434376	MS.gene69965:CDS
ACTTGTTAGAATTAAAGGAA+GGG	0.572044	8.1:+32434491	MS.gene69965:CDS
AAATCGCCAAAGAGGTGCTA+GGG	0.573895	8.1:+32434695	MS.gene69965:CDS
CTACTTCAAACATGAACACA+AGG	0.582113	8.1:+32434181	None:intergenic
GTGAAGTTTGCAGCTCAAGA+AGG	0.589706	8.1:+32434216	MS.gene69965:CDS
CTCAACTGTATGGATGAGAT+GGG	0.593407	8.1:+32434735	MS.gene69965:CDS
TTACCTTGATAAACTCCACC+CGG	0.595066	8.1:-32435782	None:intergenic
TACCTTGATAAACTCCACCC+GGG	0.596191	8.1:-32435781	None:intergenic
AATTGAAGATGTTACTGTGA+GGG	0.609664	8.1:+32434596	MS.gene69965:CDS
GCATGGAAGCTAAATCAACA+AGG	0.620083	8.1:+32434393	MS.gene69965:CDS
GCAGCAAGTGCAGAGATCAA+GGG	0.632378	8.1:+32435548	MS.gene69965:CDS
ATTGAAGATGTTACTGTGAG+GGG	0.637173	8.1:+32434597	MS.gene69965:CDS
CCATGAATATGTTGGTAAAG+CGG	0.637764	8.1:+32435868	MS.gene69965:CDS
TTGAAGACAAATCGCCAAAG+AGG	0.638843	8.1:+32434687	MS.gene69965:CDS
ATTGATGCAGCTATATGTAG+AGG	0.639713	8.1:-32434321	None:intergenic
ACCTTGATAAACTCCACCCG+GGG	0.654647	8.1:-32435780	None:intergenic
CATGGAAGCTAAATCAACAA+GGG	0.665482	8.1:+32434394	MS.gene69965:CDS
GCTTTACCAACATATTCATG+GGG	0.680672	8.1:-32435866	None:intergenic
GAACACAAGGAATGATGACA+AGG	0.682364	8.1:+32434194	MS.gene69965:CDS
CAATTGAAGATGTTACTGTG+AGG	0.693852	8.1:+32434595	MS.gene69965:CDS
AGTTTATCAAGGTAATGCTG+AGG	0.698798	8.1:+32435790	MS.gene69965:CDS
ACTATGCCCCATGAATATGT+TGG	0.700269	8.1:+32435860	MS.gene69965:CDS
CATTAGAAAAGATATATCAG+AGG	0.703068	8.1:+32435688	MS.gene69965:CDS
CCTTGATAAACTCCACCCGG+GGG	0.743301	8.1:-32435779	None:intergenic

CRISPR-GE

badsite warning	sgRNA_sequence	Strand	Position	Region	GC_content
!!	ATAAGTTAAATTATAATTGA+GGG	-	chr8.1:32435294-32435313	None:intergenic	10.0%
!!	TATAAGTTAAATTATAATTG+AGG	-	chr8.1:32435295-32435314	None:intergenic	10.0%
!!	AAGTGTATTAAAAATTGACA+AGG	-	chr8.1:32435918-32435937	None:intergenic	20.0%
!!	CAAATTAAACTAGAAAAAGA+AGG	-	chr8.1:32434808-32434827	None:intergenic	20.0%
!!	TCTATATATTCCAAAACATA+TGG	-	chr8.1:32434279-32434298	None:intergenic	20.0%
!!!	TCTTAATTTATCTTCAAGTT+TGG	-	chr8.1:32435624-32435643	None:intergenic	20.0%
!	AACTTTGAATGCAAAAAACT+TGG	+	chr8.1:32435502-32435521	MS.gene69965:CDS	25.0%
!	AAGATCAAATGTCACATTTA+TGG	+	chr8.1:32435640-32435659	MS.gene69965:CDS	25.0%
!	CATTAGAAAAGATATATCAG+AGG	+	chr8.1:32435688-32435707	MS.gene69965:CDS	25.0%
!	CATTCTTAGAAATTGTGATT+AGG	-	chr8.1:32435244-32435263	None:intergenic	25.0%
!	GTAACATCTTCAATTGAATT+TGG	-	chr8.1:32434591-32434610	None:intergenic	25.0%
!	TCAAGATTCATATTGTGAAT+TGG	-	chr8.1:32435424-32435443	None:intergenic	25.0%
!	TCATACCATCTTAAAAATCA+TGG	-	chr8.1:32434936-32434955	None:intergenic	25.0%
!	TCTTCTCTATACTTTAATTG+AGG	+	chr8.1:32434248-32434267	MS.gene69965:CDS	25.0%
!	TTGAATTTGGACAAACAAAT+AGG	-	chr8.1:32434578-32434597	None:intergenic	25.0%
!	TTTCAATCTCATAATTTCAG+TGG	-	chr8.1:32434364-32434383	None:intergenic	25.0%
!!	ACTTGTTAGAATTAAAGGAA+GGG	+	chr8.1:32434491-32434510	MS.gene69965:CDS	25.0%
!!	TAATTGAGGGTACAAAAAAA+AGG	-	chr8.1:32435281-32435300	None:intergenic	25.0%
!!!	AACTTGTTAGAATTAAAGGA+AGG	+	chr8.1:32434490-32434509	MS.gene69965:CDS	25.0%
!!!	AAGGAACTTGTTAGAATTAA+AGG	+	chr8.1:32434486-32434505	MS.gene69965:CDS	25.0%
	AATTGAAGATGTTACTGTGA+GGG	+	chr8.1:32434596-32434615	MS.gene69965:CDS	30.0%
	ATCTCTAAACAATGACTCAA+AGG	+	chr8.1:32434779-32434798	MS.gene69965:CDS	30.0%
	ATGACAATGTGTTTATCAGT+GGG	+	chr8.1:32434861-32434880	MS.gene69965:intron	30.0%
	CAAATAGGAAATTAGCTACA+AGG	-	chr8.1:32434563-32434582	None:intergenic	30.0%
	CATAGTTGCATTAGAATTCA+AGG	-	chr8.1:32435846-32435865	None:intergenic	30.0%
	CCATCTTAAAAATCATGGTT+AGG	-	chr8.1:32434931-32434950	None:intergenic	30.0%
	CTGACAATGTGTTTATAAGT+GGG	+	chr8.1:32435173-32435192	MS.gene69965:intron	30.0%
	GAAATTAACACTCAACTGTA+TGG	+	chr8.1:32434725-32434744	MS.gene69965:CDS	30.0%
	GGTCAAAAGATATATTGTCA+TGG	-	chr8.1:32435957-32435976	None:intergenic	30.0%
	TCTCTATACTTTAATTGAGG+AGG	+	chr8.1:32434251-32434270	MS.gene69965:CDS	30.0%
	TGACAATGTGTTTATAAGTG+GGG	+	chr8.1:32435174-32435193	MS.gene69965:intron	30.0%
	TTCATGTTATTCCAATTCAC+AGG	+	chr8.1:32435451-32435470	MS.gene69965:intron	30.0%
!	CAAGGTCAATTTTTCCATTT+TGG	-	chr8.1:32434545-32434564	None:intergenic	30.0%
!	TCGATTTGTAGACATGAATA+AGG	+	chr8.1:32434467-32434486	MS.gene69965:CDS	30.0%
!!	CCTAACCATGATTTTTAAGA+TGG	+	chr8.1:32434928-32434947	MS.gene69965:intron	30.0%
	AAGATCCATCAAGATCCATT+GGG	+	chr8.1:32434966-32434985	MS.gene69965:intron	35.0%
	AGTTTATCAAGGTAATGCTG+AGG	+	chr8.1:32435790-32435809	MS.gene69965:CDS	35.0%
	ATTGAAGATGTTACTGTGAG+GGG	+	chr8.1:32434597-32434616	MS.gene69965:CDS	35.0%
	ATTGATGCAGCTATATGTAG+AGG	-	chr8.1:32434324-32434343	None:intergenic	35.0%
	CAATTGAAGATGTTACTGTG+AGG	+	chr8.1:32434595-32434614	MS.gene69965:CDS	35.0%
	CATGACAATGTGTTTATCAG+TGG	+	chr8.1:32434860-32434879	MS.gene69965:intron	35.0%
	CATGGAAGCTAAATCAACAA+GGG	+	chr8.1:32434394-32434413	MS.gene69965:CDS	35.0%
	CCACTTATAAACACATTGTC+AGG	-	chr8.1:32435175-32435194	None:intergenic	35.0%
	CCTGACAATGTGTTTATAAG+TGG	+	chr8.1:32435172-32435191	MS.gene69965:intron	35.0%
	CGCTTTACCAACATATTCAT+GGG	-	chr8.1:32435870-32435889	None:intergenic	35.0%
	CTACATATAGCTGCATCAAT+GGG	+	chr8.1:32434324-32434343	MS.gene69965:CDS	35.0%
	CTTCATATTGCTTGCCAAAA+TGG	+	chr8.1:32434528-32434547	MS.gene69965:CDS	35.0%
	GACAATGTGTTTATAAGTGG+GGG	+	chr8.1:32435175-32435194	MS.gene69965:intron	35.0%
	GATTGAAACCTACATTTGCA+TGG	+	chr8.1:32434376-32434395	MS.gene69965:CDS	35.0%
	GCAAAACAACCAAAAGAGTA+TGG	+	chr8.1:32434440-32434459	MS.gene69965:CDS	35.0%
	GCTTTACCAACATATTCATG+GGG	-	chr8.1:32435869-32435888	None:intergenic	35.0%
	GGTAAAGCGGTTATAAATGA+AGG	+	chr8.1:32435881-32435900	MS.gene69965:CDS	35.0%
	GTTAGAATTAAAGGAAGGGA+AGG	+	chr8.1:32434495-32434514	MS.gene69965:CDS	35.0%
	TCTACATATAGCTGCATCAA+TGG	+	chr8.1:32434323-32434342	MS.gene69965:CDS	35.0%
	TGACAATGTGTTTATCAGTG+GGG	+	chr8.1:32434862-32434881	MS.gene69965:intron	35.0%
	TGCATTAGAATTCAAGGAAG+TGG	-	chr8.1:32435840-32435859	None:intergenic	35.0%
	TGTAGAGGAGTTTCAACAAA+TGG	-	chr8.1:32434309-32434328	None:intergenic	35.0%
!	AAGGGTATATTACTAAGTGC+TGG	+	chr8.1:32435566-32435585	MS.gene69965:CDS	35.0%
!	ATATATCTTTTGACCCCAAG+TGG	+	chr8.1:32435962-32435981	MS.gene69965:intron	35.0%
!	CCATGAATATGTTGGTAAAG+CGG	+	chr8.1:32435868-32435887	MS.gene69965:CDS	35.0%
!	TATATCTTTTGACCCCAAGT+GGG	+	chr8.1:32435963-32435982	MS.gene69965:intron	35.0%
!	TTTAGCTTCCATGCAAATGT+AGG	-	chr8.1:32434387-32434406	None:intergenic	35.0%
!	TTTTGGCAAGCAATATGAAG+AGG	-	chr8.1:32434528-32434547	None:intergenic	35.0%
!!	ACTCTTTTGGTTGTTTTGCA+TGG	-	chr8.1:32434439-32434458	None:intergenic	35.0%
!!	GCATCTTTTACTTTTGAGCT+AGG	-	chr8.1:32435599-32435618	None:intergenic	35.0%
	ACTATGCCCCATGAATATGT+TGG	+	chr8.1:32435860-32435879	MS.gene69965:CDS	40.0%
	ACTCAACTGTATGGATGAGA+TGG	+	chr8.1:32434734-32434753	MS.gene69965:CDS	40.0%
	CAAGATCCATCAAGATCCAT+TGG	+	chr8.1:32434965-32434984	MS.gene69965:intron	40.0%
	CCGCTTTACCAACATATTCA+TGG	-	chr8.1:32435871-32435890	None:intergenic	40.0%
	CTCAACTGTATGGATGAGAT+GGG	+	chr8.1:32434735-32434754	MS.gene69965:CDS	40.0%
	GAACACAAGGAATGATGACA+AGG	+	chr8.1:32434194-32434213	MS.gene69965:CDS	40.0%
	GACAATGTGTTTATCAGTGG+GGG	+	chr8.1:32434863-32434882	MS.gene69965:intron	40.0%
	GCATGGAAGCTAAATCAACA+AGG	+	chr8.1:32434393-32434412	MS.gene69965:CDS	40.0%
	TGCTATTAGGTTTCCGCTAT+CGG	+	chr8.1:32435062-32435081	MS.gene69965:intron	40.0%
	TGTGTTAAAGAGTCCCACAT+CGG	+	chr8.1:32435138-32435157	MS.gene69965:intron	40.0%
	TTACCTTGATAAACTCCACC+CGG	-	chr8.1:32435785-32435804	None:intergenic	40.0%
	TTCACAGGCACTTCAATTGT+TGG	+	chr8.1:32435466-32435485	MS.gene69965:intron	40.0%
	TTGAAGACAAATCGCCAAAG+AGG	+	chr8.1:32434687-32434706	MS.gene69965:CDS	40.0%
!	CAATTGAAGTGCCTGTGAAT+TGG	-	chr8.1:32435465-32435484	None:intergenic	40.0%
!	GATCTTGATGGATCTTGAAG+AGG	-	chr8.1:32434962-32434981	None:intergenic	40.0%
!	GTTTGAAGCTCTTCATGTGT+TGG	+	chr8.1:32434656-32434675	MS.gene69965:CDS	40.0%
!	TGAGGAGGATCCATATGTTT+TGG	+	chr8.1:32434266-32434285	MS.gene69965:CDS	40.0%
!!	ATCGAAGCACCATACTCTTT+TGG	-	chr8.1:32434452-32434471	None:intergenic	40.0%
!!	TTTGGTTGTTTTGCATGGCA+AGG	-	chr8.1:32434434-32434453	None:intergenic	40.0%
!!!	ACCTCTCAAGCTGGTTTTAT+GGG	+	chr8.1:32435207-32435226	MS.gene69965:intron	40.0%
!!!	TGGTTTTATGGGGTTGTGTT+AGG	+	chr8.1:32435218-32435237	MS.gene69965:intron	40.0%
	ACCTCATAAGCCGATGTTGT+GGG	+	chr8.1:32434894-32434913	MS.gene69965:intron	45.0%
	AGCCTCCTCCAAGATTCATT+AGG	+	chr8.1:32435034-32435053	MS.gene69965:intron	45.0%
	AGGTCATCTCTTATCCGATG+TGG	-	chr8.1:32435155-32435174	None:intergenic	45.0%
	ATGTCATCTCTTATCCGACG+TGG	-	chr8.1:32434843-32434862	None:intergenic	45.0%
	CTAACACAACCCCACAACAT+CGG	-	chr8.1:32434907-32434926	None:intergenic	45.0%
	GGTCATCTCTTATCCGATGT+GGG	-	chr8.1:32435154-32435173	None:intergenic	45.0%
	GTGAAGTTTGCAGCTCAAGA+AGG	+	chr8.1:32434216-32434235	MS.gene69965:CDS	45.0%
	TAAAACCAGCTTGAGAGGTG+AGG	-	chr8.1:32435206-32435225	None:intergenic	45.0%
	TACCTTGATAAACTCCACCC+GGG	-	chr8.1:32435784-32435803	None:intergenic	45.0%
	TCATTAGGCCACCTGCTATT+AGG	+	chr8.1:32435049-32435068	MS.gene69965:intron	45.0%
	TGTCATCTCTTATCCGACGT+GGG	-	chr8.1:32434842-32434861	None:intergenic	45.0%
	TGTCTTAAAGAGTCCCACGT+CGG	+	chr8.1:32434826-32434845	MS.gene69965:intron	45.0%
!	ATCTGGAGCGTGGACATAAA+TGG	-	chr8.1:32435096-32435115	None:intergenic	45.0%
!	GAAGCTCTTCATGTGTTGGT+TGG	+	chr8.1:32434660-32434679	MS.gene69965:CDS	45.0%
!	TTTTGCATGGCAAGGTGGAT+TGG	-	chr8.1:32434426-32434445	None:intergenic	45.0%
!!	AAATCGCCAAAGAGGTGCTA+GGG	+	chr8.1:32434695-32434714	MS.gene69965:CDS	45.0%
!!	CTCTTCATGTGTTGGTTGGT+TGG	+	chr8.1:32434664-32434683	MS.gene69965:CDS	45.0%
!!	GATAGCGGAAACCTAATAGC+AGG	-	chr8.1:32435063-32435082	None:intergenic	45.0%
!!!	CACCTCTCAAGCTGGTTTTA+TGG	+	chr8.1:32435206-32435225	MS.gene69965:intron	45.0%
!!!	CCTCTCAAGCTGGTTTTATG+GGG	+	chr8.1:32435208-32435227	MS.gene69965:intron	45.0%
	AATGGTGTGTGGTCCGATAG+CGG	-	chr8.1:32435078-32435097	None:intergenic	50.0%
	ACAATCCTCACCTCTCAAGC+TGG	+	chr8.1:32435198-32435217	MS.gene69965:intron	50.0%
	ACCTTGATAAACTCCACCCG+GGG	-	chr8.1:32435783-32435802	None:intergenic	50.0%
	AGCAGCAAGTGCAGAGATCA+AGG	+	chr8.1:32435547-32435566	MS.gene69965:CDS	50.0%
	AGCGGAAACCTAATAGCAGG+TGG	-	chr8.1:32435060-32435079	None:intergenic	50.0%
	CACCTCATAAGCCGATGTTG+TGG	+	chr8.1:32434893-32434912	MS.gene69965:intron	50.0%
	CCCCATAAAACCAGCTTGAG+AGG	-	chr8.1:32435211-32435230	None:intergenic	50.0%
	CCTCATAAGCCGATGTTGTG+GGG	+	chr8.1:32434895-32434914	MS.gene69965:intron	50.0%
	CGATGTTGTGGGGTTGTGTT+AGG	+	chr8.1:32434905-32434924	MS.gene69965:intron	50.0%
	CTAACTCCCTAGCACCTCTT+TGG	-	chr8.1:32434704-32434723	None:intergenic	50.0%
	GCAGCAAGTGCAGAGATCAA+GGG	+	chr8.1:32435548-32435567	MS.gene69965:CDS	50.0%
	GCAGGTGGCCTAATGAATCT+TGG	-	chr8.1:32435045-32435064	None:intergenic	50.0%
	GCGTGGACATAAATGGTGTG+TGG	-	chr8.1:32435089-32435108	None:intergenic	50.0%
	GGCCTAATGAATCTTGGAGG+AGG	-	chr8.1:32435039-32435058	None:intergenic	50.0%
	GGTGGCCTAATGAATCTTGG+AGG	-	chr8.1:32435042-32435061	None:intergenic	50.0%
	TACCATCAGTGGTCCGATAG+CGG	-	chr8.1:32435010-32435029	None:intergenic	50.0%
	TGCTGTAAGGCTTCCGCTAT+CGG	+	chr8.1:32434994-32435013	MS.gene69965:intron	50.0%
!	GGAGGCTCTAATACCATCAG+TGG	-	chr8.1:32435021-32435040	None:intergenic	50.0%
!!	CAAATCGCCAAAGAGGTGCT+AGG	+	chr8.1:32434694-32434713	MS.gene69965:CDS	50.0%
!!	GGTTGTTTTGCATGGCAAGG+TGG	-	chr8.1:32434431-32434450	None:intergenic	50.0%
	ATGTCCAGTCCTGGGTGTGA+GGG	+	chr8.1:32435114-32435133	MS.gene69965:intron	55.0%
	CCTTGATAAACTCCACCCGG+GGG	-	chr8.1:32435782-32435801	None:intergenic	55.0%
	GGTGGCCCAATGGATCTTGA+TGG	-	chr8.1:32434974-32434993	None:intergenic	55.0%
	TTAACACACCCCTCACACCC+AGG	-	chr8.1:32435126-32435145	None:intergenic	55.0%
	TTCCGCTATCGGACCACTGA+TGG	+	chr8.1:32435005-32435024	MS.gene69965:intron	55.0%
!	TCAATCAGCACTGAGTCCCC+CGG	+	chr8.1:32435763-32435782	MS.gene69965:CDS	55.0%
!!	CCCCACAACATCGGCTTATG+AGG	-	chr8.1:32434898-32434917	None:intergenic	55.0%
!!	GATAGCGGAAGCCTTACAGC+AGG	-	chr8.1:32434995-32435014	None:intergenic	55.0%
	ACGCTCCAGATGTCCAGTCC+TGG	+	chr8.1:32435105-32435124	MS.gene69965:intron	60.0%
	AGCGGAAGCCTTACAGCAGG+TGG	-	chr8.1:32434992-32435011	None:intergenic	60.0%
	CACACCCAGGACTGGACATC+TGG	-	chr8.1:32435113-32435132	None:intergenic	60.0%
	CCATTGGGCCACCTGCTGTA+AGG	+	chr8.1:32434981-32435000	MS.gene69965:intron	60.0%
	CCCCCGGGTGGAGTTTATCA+AGG	+	chr8.1:32435779-32435798	MS.gene69965:CDS	60.0%
	CCTTACAGCAGGTGGCCCAA+TGG	-	chr8.1:32434984-32435003	None:intergenic	60.0%
	CGCTCCAGATGTCCAGTCCT+GGG	+	chr8.1:32435106-32435125	MS.gene69965:intron	60.0%
	GATGTCCAGTCCTGGGTGTG+AGG	+	chr8.1:32435113-32435132	MS.gene69965:intron	60.0%
	TGTCCAGTCCTGGGTGTGAG+GGG	+	chr8.1:32435115-32435134	MS.gene69965:intron	60.0%
!	AGGACTGGACATCTGGAGCG+TGG	-	chr8.1:32435106-32435125	None:intergenic	60.0%
!	CAATCAGCACTGAGTCCCCC+GGG	+	chr8.1:32435764-32435783	MS.gene69965:CDS	60.0%
	ACACCCCTCACACCCAGGAC+TGG	-	chr8.1:32435121-32435140	None:intergenic	65.0%
!	TCAGCACTGAGTCCCCCGGG+TGG	+	chr8.1:32435767-32435786	MS.gene69965:CDS	70.0%

Chromosome	Type	Strat	End	Strand	Name
chr8.1	gene	32434192	32435992	32434192	ID=MS.gene69965
chr8.1	mRNA	32434192	32435992	32434192	ID=MS.gene69965.t1;Parent=MS.gene69965
chr8.1	exon	32434192	32434800	32434192	ID=MS.gene69965.t1.exon1;Parent=MS.gene69965.t1
chr8.1	CDS	32434192	32434800	32434192	ID=cds.MS.gene69965.t1;Parent=MS.gene69965.t1
chr8.1	exon	32435473	32435902	32435473	ID=MS.gene69965.t1.exon2;Parent=MS.gene69965.t1
chr8.1	CDS	32435473	32435902	32435473	ID=cds.MS.gene69965.t1;Parent=MS.gene69965.t1
chr8.1	exon	32435982	32435992	32435982	ID=MS.gene69965.t1.exon3;Parent=MS.gene69965.t1
chr8.1	CDS	32435982	32435992	32435982	ID=cds.MS.gene69965.t1;Parent=MS.gene69965.t1

Gene Sequence

>MS.gene69965

ATGAACACAAGGAATGATGACAAGGTGAAGTTTGCAGCTCAAGAAGGTGATATAAATCTTCTCTATACTTTAATTGAGGAGGATCCATATGTTTTGGAATATATAGATTTGATTCCATTTGTTGAAACTCCTCTACATATAGCTGCATCAATGGGACATGTTCGATTTTCCACTGAAATTATGAGATTGAAACCTACATTTGCATGGAAGCTAAATCAACAAGGGTTCAGTCCAATCCACCTTGCCATGCAAAACAACCAAAAGAGTATGGTGCTTCGATTTGTAGACATGAATAAGGAACTTGTTAGAATTAAAGGAAGGGAAGGTTTAACTCCTCTTCATATTGCTTGCCAAAATGGAAAAATTGACCTTGTAGCTAATTTCCTATTTGTTTGTCCAAATTCAATTGAAGATGTTACTGTGAGGGGTGAGACTGCACTTCATATTGCTGTAAGAAATAAACAGTTTGAAGCTCTTCATGTGTTGGTTGGTTGGTTGAAGACAAATCGCCAAAGAGGTGCTAGGGAGTTAGAGAAATTAACACTCAACTGTATGGATGAGATGGGAAATACTATTTTGCACATTTCATCTCTAAACAATGACTCAAAGGTATCCTTCTTTTTCTAGTTTAATTTGTCTTAAAGAGTCCCACGTCGGATAAGAGATGACATGACAATGTGTTTATCAGTGGGGGCAATCTTCACCTCATAAGCCGATGTTGTGGGGTTGTGTTAGGCCTAACCATGATTTTTAAGATGGTATGAGAGCCTCTTCAAGATCCATCAAGATCCATTGGGCCACCTGCTGTAAGGCTTCCGCTATCGGACCACTGATGGTATTAGAGCCTCCTCCAAGATTCATTAGGCCACCTGCTATTAGGTTTCCGCTATCGGACCACACACCATTTATGTCCACGCTCCAGATGTCCAGTCCTGGGTGTGAGGGGTGTGTTAAAGAGTCCCACATCGGATAAGAGATGACCTGACAATGTGTTTATAAGTGGGGGACAATCCTCACCTCTCAAGCTGGTTTTATGGGGTTGTGTTAGGCCTAATCACAATTTCTAAGAATGTCTTCTTTATACATCCTTTTTTTTGTACCCTCAATTATAATTTAACTTATAACTTTGCTAAGTCACTTATTTTTAATTAAAAATGAATTTTTTTATACGACTAATATATTTTACAATTCATAATAAAATTCAATTTACAAATCAATAAATAGCTATTCCAATTCACAATATGAATCTTGATTTGTTATTCATGTTATTCCAATTCACAGGCACTTCAATTGTTGGTAAAGACTAAGATAACTTTGAATGCAAAAAACTTGGAGAACTCAACAGCATTAGACATAGCAGCAAGTGCAGAGATCAAGGGTATATTACTAAGTGCTGGAGCAAAACCTAGCTCAAAAGTAAAAGATGCTACCAAACTTGAAGATAAATTAAGATCAAATGTCACATTTATGGACAAAATATTAATTTATGTACTACGCATTAGAAAAGATATATCAGAGGAACAACGCAACACTTTTCTAATAGTTGCTGCTCTTATTGCAACTGCTACATATCAATCAGCACTGAGTCCCCCGGGTGGAGTTTATCAAGGTAATGCTGAGGATCACAATAATAATGTGAAAAACACCACTTCCTTGAATTCTAATGCAACTATGCCCCATGAATATGTTGGTAAAGCGGTTATAAATGAAGGTGATTTTTTTTCCTTGTCAATTTTTAATACACTTTCACTTTTGTTATCAACCATGACAATATATCTTTTGACCCCAAGTGGGTCAATAG

Protein sequence

>MS.gene69965.t1

MNTRNDDKVKFAAQEGDINLLYTLIEEDPYVLEYIDLIPFVETPLHIAASMGHVRFSTEIMRLKPTFAWKLNQQGFSPIHLAMQNNQKSMVLRFVDMNKELVRIKGREGLTPLHIACQNGKIDLVANFLFVCPNSIEDVTVRGETALHIAVRNKQFEALHVLVGWLKTNRQRGARELEKLTLNCMDEMGNTILHISSLNNDSKALQLLVKTKITLNAKNLENSTALDIAASAEIKGILLSAGAKPSSKVKDATKLEDKLRSNVTFMDKILIYVLRIRKDISEEQRNTFLIVAALIATATYQSALSPPGGVYQGNAEDHNNNVKNTTSLNSNATMPHEYVGKAVINEVGQ