Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene070266.t1 | XP_003610078.1 | 92.3 | 130 | 5 | 1 | 1 | 125 | 1 | 130 | 4.00E-55 | 224.6 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene070266.t1 | B7FME6 | 92.3 | 130 | 5 | 1 | 1 | 125 | 1 | 130 | 2.9e-55 | 224.6 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| MS.gene049170 | MS.gene070266 | 0.837275 | 5.72E-57 | -1.69E-46 |
| MS.gene049284 | MS.gene070266 | 0.800761 | 1.24E-48 | -1.69E-46 |
| MS.gene049346 | MS.gene070266 | 0.825349 | 4.92E-54 | -1.69E-46 |
| MS.gene049356 | MS.gene070266 | 0.868653 | 5.56E-66 | -1.69E-46 |
| MS.gene049369 | MS.gene070266 | 0.848122 | 7.50E-60 | -1.69E-46 |
| MS.gene049427 | MS.gene070266 | 0.815162 | 1.06E-51 | -1.69E-46 |
| MS.gene049491 | MS.gene070266 | 0.821953 | 3.07E-53 | -1.69E-46 |
| MS.gene049661 | MS.gene070266 | 0.830003 | 3.75E-55 | -1.69E-46 |
| MS.gene049662 | MS.gene070266 | 0.833918 | 4.05E-56 | -1.69E-46 |
| MS.gene049758 | MS.gene070266 | 0.86339 | 2.58E-64 | -1.69E-46 |
| MS.gene049805 | MS.gene070266 | 0.802767 | 4.80E-49 | -1.69E-46 |
| MS.gene049910 | MS.gene070266 | 0.820793 | 5.68E-53 | -1.69E-46 |
| MS.gene049915 | MS.gene070266 | 0.803762 | 2.99E-49 | -1.69E-46 |
| MS.gene050060 | MS.gene070266 | 0.821287 | 4.38E-53 | -1.69E-46 |
| MS.gene050076 | MS.gene070266 | 0.800107 | 1.68E-48 | -1.69E-46 |
| MS.gene050128 | MS.gene070266 | 0.847404 | 1.18E-59 | -1.69E-46 |
| MS.gene050301 | MS.gene070266 | 0.873005 | 2.05E-67 | -1.69E-46 |
| MS.gene050397 | MS.gene070266 | 0.838329 | 3.07E-57 | -1.69E-46 |
| MS.gene050400 | MS.gene070266 | 0.805281 | 1.44E-49 | -1.69E-46 |
| MS.gene050404 | MS.gene070266 | 0.858864 | 6.15E-63 | -1.69E-46 |
| MS.gene050406 | MS.gene070266 | 0.864545 | 1.13E-64 | -1.69E-46 |
| MS.gene050426 | MS.gene070266 | -0.820769 | 5.76E-53 | -1.69E-46 |
| MS.gene050432 | MS.gene070266 | 0.847057 | 1.47E-59 | -1.69E-46 |
| MS.gene050464 | MS.gene070266 | 0.842927 | 1.92E-58 | -1.69E-46 |
| MS.gene050529 | MS.gene070266 | 0.870093 | 1.89E-66 | -1.69E-46 |
| MS.gene050593 | MS.gene070266 | 0.809529 | 1.81E-50 | -1.69E-46 |
| MS.gene050670 | MS.gene070266 | 0.881255 | 2.79E-70 | -1.69E-46 |
| MS.gene050812 | MS.gene070266 | 0.829562 | 4.80E-55 | -1.69E-46 |
| MS.gene050971 | MS.gene070266 | 0.826338 | 2.87E-54 | -1.69E-46 |
| MS.gene05101 | MS.gene070266 | 0.821138 | 4.73E-53 | -1.69E-46 |
| MS.gene05105 | MS.gene070266 | 0.893301 | 7.14E-75 | -1.69E-46 |
| MS.gene051228 | MS.gene070266 | 0.809591 | 1.75E-50 | -1.69E-46 |
| MS.gene051360 | MS.gene070266 | 0.817179 | 3.77E-52 | -1.69E-46 |
| MS.gene051471 | MS.gene070266 | 0.839023 | 2.03E-57 | -1.69E-46 |
| MS.gene051525 | MS.gene070266 | 0.814677 | 1.36E-51 | -1.69E-46 |
| MS.gene051582 | MS.gene070266 | 0.834244 | 3.35E-56 | -1.69E-46 |
| MS.gene051605 | MS.gene070266 | 0.826562 | 2.53E-54 | -1.69E-46 |
| MS.gene051666 | MS.gene070266 | 0.816157 | 6.39E-52 | -1.69E-46 |
| MS.gene051983 | MS.gene070266 | 0.800047 | 1.73E-48 | -1.69E-46 |
| MS.gene052077 | MS.gene070266 | 0.880142 | 7.00E-70 | -1.69E-46 |
| MS.gene052078 | MS.gene070266 | 0.844693 | 6.45E-59 | -1.69E-46 |
| MS.gene052134 | MS.gene070266 | 0.819975 | 8.76E-53 | -1.69E-46 |
| MS.gene052135 | MS.gene070266 | 0.827604 | 1.43E-54 | -1.69E-46 |
| MS.gene052136 | MS.gene070266 | 0.822444 | 2.36E-53 | -1.69E-46 |
| MS.gene052178 | MS.gene070266 | 0.835821 | 1.34E-56 | -1.69E-46 |
| MS.gene052188 | MS.gene070266 | 0.921182 | 4.97E-88 | -1.69E-46 |
| MS.gene052253 | MS.gene070266 | 0.871954 | 4.61E-67 | -1.69E-46 |
| MS.gene052290 | MS.gene070266 | 0.806293 | 8.83E-50 | -1.69E-46 |
| MS.gene052310 | MS.gene070266 | 0.899552 | 1.77E-77 | -1.69E-46 |
| MS.gene052322 | MS.gene070266 | 0.826776 | 2.25E-54 | -1.69E-46 |
| MS.gene052340 | MS.gene070266 | 0.922949 | 5.05E-89 | -1.69E-46 |
| MS.gene052414 | MS.gene070266 | 0.830823 | 2.36E-55 | -1.69E-46 |
| MS.gene052421 | MS.gene070266 | 0.840061 | 1.09E-57 | -1.69E-46 |
| MS.gene052469 | MS.gene070266 | 0.806955 | 6.40E-50 | -1.69E-46 |
| MS.gene052481 | MS.gene070266 | 0.82152 | 3.87E-53 | -1.69E-46 |
| MS.gene052484 | MS.gene070266 | 0.823499 | 1.34E-53 | -1.69E-46 |
| MS.gene052485 | MS.gene070266 | 0.845127 | 4.93E-59 | -1.69E-46 |
| MS.gene052784 | MS.gene070266 | 0.81107 | 8.41E-51 | -1.69E-46 |
| MS.gene053073 | MS.gene070266 | 0.84976 | 2.63E-60 | -1.69E-46 |
| MS.gene053103 | MS.gene070266 | 0.845084 | 5.06E-59 | -1.69E-46 |
| MS.gene053104 | MS.gene070266 | 0.823653 | 1.23E-53 | -1.69E-46 |
| MS.gene05316 | MS.gene070266 | 0.85345 | 2.37E-61 | -1.69E-46 |
| MS.gene053181 | MS.gene070266 | 0.811393 | 7.16E-51 | -1.69E-46 |
| MS.gene053209 | MS.gene070266 | 0.900959 | 4.34E-78 | -1.69E-46 |
| MS.gene053449 | MS.gene070266 | 0.839526 | 1.50E-57 | -1.69E-46 |
| MS.gene053557 | MS.gene070266 | 0.889241 | 2.89E-73 | -1.69E-46 |
| MS.gene053758 | MS.gene070266 | 0.828493 | 8.72E-55 | -1.69E-46 |
| MS.gene053836 | MS.gene070266 | 0.847064 | 1.46E-59 | -1.69E-46 |
| MS.gene053912 | MS.gene070266 | 0.83814 | 3.43E-57 | -1.69E-46 |
| MS.gene053928 | MS.gene070266 | 0.851403 | 9.08E-61 | -1.69E-46 |
| MS.gene054123 | MS.gene070266 | 0.862969 | 3.48E-64 | -1.69E-46 |
| MS.gene054327 | MS.gene070266 | 0.806482 | 8.05E-50 | -1.69E-46 |
| MS.gene054349 | MS.gene070266 | 0.875744 | 2.42E-68 | -1.69E-46 |
| MS.gene054376 | MS.gene070266 | 0.80105 | 1.08E-48 | -1.69E-46 |
| MS.gene054556 | MS.gene070266 | 0.808322 | 3.28E-50 | -1.69E-46 |
| MS.gene054930 | MS.gene070266 | 0.836812 | 7.52E-57 | -1.69E-46 |
| MS.gene054955 | MS.gene070266 | 0.801539 | 8.58E-49 | -1.69E-46 |
| MS.gene05505 | MS.gene070266 | 0.824586 | 7.45E-54 | -1.69E-46 |
| MS.gene055116 | MS.gene070266 | 0.915538 | 5.22E-85 | -1.69E-46 |
| MS.gene055277 | MS.gene070266 | 0.840249 | 9.74E-58 | -1.69E-46 |
| MS.gene055412 | MS.gene070266 | 0.815508 | 8.92E-52 | -1.69E-46 |
| MS.gene055422 | MS.gene070266 | 0.843889 | 1.06E-58 | -1.69E-46 |
| MS.gene055428 | MS.gene070266 | 0.81562 | 8.42E-52 | -1.69E-46 |
| MS.gene055539 | MS.gene070266 | 0.825745 | 3.96E-54 | -1.69E-46 |
| MS.gene05553 | MS.gene070266 | 0.868768 | 5.11E-66 | -1.69E-46 |
| MS.gene055604 | MS.gene070266 | 0.802432 | 5.63E-49 | -1.69E-46 |
| MS.gene055741 | MS.gene070266 | 0.802318 | 5.94E-49 | -1.69E-46 |
| MS.gene055744 | MS.gene070266 | 0.813665 | 2.28E-51 | -1.69E-46 |
| MS.gene055859 | MS.gene070266 | 0.822475 | 2.32E-53 | -1.69E-46 |
| MS.gene05592 | MS.gene070266 | 0.821152 | 4.70E-53 | -1.69E-46 |
| MS.gene056191 | MS.gene070266 | 0.82706 | 1.93E-54 | -1.69E-46 |
| MS.gene056407 | MS.gene070266 | 0.858226 | 9.53E-63 | -1.69E-46 |
| MS.gene056410 | MS.gene070266 | 0.809169 | 2.16E-50 | -1.69E-46 |
| MS.gene056511 | MS.gene070266 | 0.86018 | 2.47E-63 | -1.69E-46 |
| MS.gene056609 | MS.gene070266 | 0.879166 | 1.56E-69 | -1.69E-46 |
| MS.gene056612 | MS.gene070266 | 0.834526 | 2.85E-56 | -1.69E-46 |
| MS.gene056659 | MS.gene070266 | 0.876239 | 1.64E-68 | -1.69E-46 |
| MS.gene056719 | MS.gene070266 | 0.865572 | 5.36E-65 | -1.69E-46 |
| MS.gene056723 | MS.gene070266 | 0.803164 | 3.97E-49 | -1.69E-46 |
| MS.gene056796 | MS.gene070266 | 0.816344 | 5.80E-52 | -1.69E-46 |
| MS.gene056897 | MS.gene070266 | 0.845987 | 2.88E-59 | -1.69E-46 |
| MS.gene05702 | MS.gene070266 | 0.877652 | 5.29E-69 | -1.69E-46 |
| MS.gene057076 | MS.gene070266 | 0.802364 | 5.81E-49 | -1.69E-46 |
| MS.gene057124 | MS.gene070266 | 0.88124 | 2.83E-70 | -1.69E-46 |
| MS.gene057129 | MS.gene070266 | 0.800803 | 1.21E-48 | -1.69E-46 |
| MS.gene057199 | MS.gene070266 | 0.814701 | 1.35E-51 | -1.69E-46 |
| MS.gene057207 | MS.gene070266 | 0.802862 | 4.59E-49 | -1.69E-46 |
| MS.gene057331 | MS.gene070266 | 0.806188 | 9.29E-50 | -1.69E-46 |
| MS.gene05735 | MS.gene070266 | 0.820521 | 6.57E-53 | -1.69E-46 |
| MS.gene057396 | MS.gene070266 | 0.86523 | 6.87E-65 | -1.69E-46 |
| MS.gene057448 | MS.gene070266 | 0.866724 | 2.31E-65 | -1.69E-46 |
| MS.gene057449 | MS.gene070266 | 0.85126 | 9.97E-61 | -1.69E-46 |
| MS.gene057450 | MS.gene070266 | 0.873314 | 1.62E-67 | -1.69E-46 |
| MS.gene057537 | MS.gene070266 | 0.822324 | 2.52E-53 | -1.69E-46 |
| MS.gene057749 | MS.gene070266 | 0.843108 | 1.72E-58 | -1.69E-46 |
| MS.gene057754 | MS.gene070266 | 0.801301 | 9.60E-49 | -1.69E-46 |
| MS.gene057796 | MS.gene070266 | 0.828132 | 1.07E-54 | -1.69E-46 |
| MS.gene057823 | MS.gene070266 | 0.833827 | 4.26E-56 | -1.69E-46 |
| MS.gene057825 | MS.gene070266 | 0.807721 | 4.40E-50 | -1.69E-46 |
| MS.gene057927 | MS.gene070266 | 0.842572 | 2.38E-58 | -1.69E-46 |
| MS.gene058002 | MS.gene070266 | 0.860331 | 2.23E-63 | -1.69E-46 |
| MS.gene058007 | MS.gene070266 | 0.84582 | 3.20E-59 | -1.69E-46 |
| MS.gene058082 | MS.gene070266 | 0.885321 | 8.99E-72 | -1.69E-46 |
| MS.gene05811 | MS.gene070266 | 0.835984 | 1.22E-56 | -1.69E-46 |
| MS.gene058142 | MS.gene070266 | 0.845911 | 3.02E-59 | -1.69E-46 |
| MS.gene058233 | MS.gene070266 | 0.837674 | 4.52E-57 | -1.69E-46 |
| MS.gene058276 | MS.gene070266 | 0.840405 | 8.87E-58 | -1.69E-46 |
| MS.gene058293 | MS.gene070266 | 0.842943 | 1.90E-58 | -1.69E-46 |
| MS.gene058365 | MS.gene070266 | 0.875341 | 3.33E-68 | -1.69E-46 |
| MS.gene058444 | MS.gene070266 | 0.804221 | 2.40E-49 | -1.69E-46 |
| MS.gene058660 | MS.gene070266 | 0.841127 | 5.74E-58 | -1.69E-46 |
| MS.gene058700 | MS.gene070266 | 0.823004 | 1.75E-53 | -1.69E-46 |
| MS.gene058710 | MS.gene070266 | 0.827667 | 1.38E-54 | -1.69E-46 |
| MS.gene058748 | MS.gene070266 | 0.811411 | 7.10E-51 | -1.69E-46 |
| MS.gene058787 | MS.gene070266 | 0.825654 | 4.17E-54 | -1.69E-46 |
| MS.gene058845 | MS.gene070266 | 0.830585 | 2.70E-55 | -1.69E-46 |
| MS.gene05886 | MS.gene070266 | 0.810872 | 9.29E-51 | -1.69E-46 |
| MS.gene058928 | MS.gene070266 | 0.878919 | 1.90E-69 | -1.69E-46 |
| MS.gene058948 | MS.gene070266 | 0.820294 | 7.40E-53 | -1.69E-46 |
| MS.gene058949 | MS.gene070266 | 0.812848 | 3.45E-51 | -1.69E-46 |
| MS.gene059011 | MS.gene070266 | 0.834727 | 2.54E-56 | -1.69E-46 |
| MS.gene05907 | MS.gene070266 | 0.857351 | 1.73E-62 | -1.69E-46 |
| MS.gene059285 | MS.gene070266 | 0.870294 | 1.63E-66 | -1.69E-46 |
| MS.gene059294 | MS.gene070266 | 0.821213 | 4.55E-53 | -1.69E-46 |
| MS.gene059366 | MS.gene070266 | 0.868146 | 8.11E-66 | -1.69E-46 |
| MS.gene059420 | MS.gene070266 | 0.829134 | 6.10E-55 | -1.69E-46 |
| MS.gene059518 | MS.gene070266 | 0.816306 | 5.92E-52 | -1.69E-46 |
| MS.gene059597 | MS.gene070266 | 0.870094 | 1.89E-66 | -1.69E-46 |
| MS.gene05959 | MS.gene070266 | 0.835298 | 1.82E-56 | -1.69E-46 |
| MS.gene059674 | MS.gene070266 | 0.810507 | 1.11E-50 | -1.69E-46 |
| MS.gene059676 | MS.gene070266 | 0.873463 | 1.44E-67 | -1.69E-46 |
| MS.gene059688 | MS.gene070266 | 0.918074 | 2.44E-86 | -1.69E-46 |
| MS.gene059692 | MS.gene070266 | 0.926323 | 5.49E-91 | -1.69E-46 |
| MS.gene059695 | MS.gene070266 | 0.924942 | 3.59E-90 | -1.69E-46 |
| MS.gene059708 | MS.gene070266 | 0.829305 | 5.54E-55 | -1.69E-46 |
| MS.gene059711 | MS.gene070266 | 0.819836 | 9.42E-53 | -1.69E-46 |
| MS.gene059788 | MS.gene070266 | 0.830973 | 2.17E-55 | -1.69E-46 |
| MS.gene059807 | MS.gene070266 | 0.874809 | 5.05E-68 | -1.69E-46 |
| MS.gene05984 | MS.gene070266 | 0.851375 | 9.24E-61 | -1.69E-46 |
| MS.gene059894 | MS.gene070266 | 0.883421 | 4.55E-71 | -1.69E-46 |
| MS.gene059899 | MS.gene070266 | 0.832856 | 7.45E-56 | -1.69E-46 |
| MS.gene059960 | MS.gene070266 | 0.808307 | 3.30E-50 | -1.69E-46 |
| MS.gene059974 | MS.gene070266 | 0.819937 | 8.93E-53 | -1.69E-46 |
| MS.gene060247 | MS.gene070266 | 0.817659 | 2.94E-52 | -1.69E-46 |
| MS.gene06037 | MS.gene070266 | 0.838561 | 2.67E-57 | -1.69E-46 |
| MS.gene060403 | MS.gene070266 | 0.849416 | 3.28E-60 | -1.69E-46 |
| MS.gene060407 | MS.gene070266 | 0.850167 | 2.02E-60 | -1.69E-46 |
| MS.gene060495 | MS.gene070266 | 0.841343 | 5.03E-58 | -1.69E-46 |
| MS.gene060496 | MS.gene070266 | 0.80418 | 2.44E-49 | -1.69E-46 |
| MS.gene060569 | MS.gene070266 | 0.815698 | 8.09E-52 | -1.69E-46 |
| MS.gene060804 | MS.gene070266 | 0.838941 | 2.13E-57 | -1.69E-46 |
| MS.gene060818 | MS.gene070266 | 0.819979 | 8.74E-53 | -1.69E-46 |
| MS.gene060835 | MS.gene070266 | 0.809204 | 2.12E-50 | -1.69E-46 |
| MS.gene060837 | MS.gene070266 | 0.833203 | 6.10E-56 | -1.69E-46 |
| MS.gene061041 | MS.gene070266 | 0.838916 | 2.16E-57 | -1.69E-46 |
| MS.gene061049 | MS.gene070266 | 0.906449 | 1.47E-80 | -1.69E-46 |
| MS.gene061051 | MS.gene070266 | -0.877596 | 5.54E-69 | -1.69E-46 |
| MS.gene061154 | MS.gene070266 | 0.880336 | 5.97E-70 | -1.69E-46 |
| MS.gene061159 | MS.gene070266 | 0.859649 | 3.57E-63 | -1.69E-46 |
PPI:
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene070266.t1 | MTR_4g127690 | 92.347 | 196 | 10 | 1 | 1 | 191 | 1 | 196 | 1.50e-109 | 311 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene070266.t1 | AT5G57345 | 57.754 | 187 | 72 | 3 | 5 | 191 | 9 | 188 | 8.70e-48 | 154 |
Find 58 sgRNAs with CRISPR-Local
Find 248 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| GCCATACTATGGTGGTGGTT+GGG | 0.312006 | 8.2:-5822697 | MS.gene070266:CDS |
| AACAATCTTCAACTCCATTA+AGG | 0.317786 | 8.2:-5825524 | MS.gene070266:intron |
| CCTGGTGCAAAGAAAGAAAA+TGG | 0.328053 | 8.2:+5822666 | None:intergenic |
| ACCAATTCTACCACCAGTTT+TGG | 0.337468 | 8.2:+5825327 | None:intergenic |
| GAATTGTTATTGTTGATTCT+TGG | 0.352408 | 8.2:+5825265 | None:intergenic |
| CCCCAACCACCACCATAGTA+TGG | 0.355295 | 8.2:+5822696 | None:intergenic |
| AAGAAGAATGAGAACAAGTT+AGG | 0.368246 | 8.2:-5825418 | MS.gene070266:CDS |
| TGCAGTTGTGAGGAAATTCT+TGG | 0.380171 | 8.2:-5822571 | MS.gene070266:CDS |
| CCATACTATGGTGGTGGTTG+GGG | 0.384922 | 8.2:-5822696 | MS.gene070266:CDS |
| CCTCCACTAGGTGGTGGATA+CGG | 0.391006 | 8.2:-5822732 | MS.gene070266:CDS |
| TGCCATACTATGGTGGTGGT+TGG | 0.397465 | 8.2:-5822698 | MS.gene070266:CDS |
| TCCTGCTGCTCCTAAAAGTT+GGG | 0.413791 | 8.2:+5825592 | None:intergenic |
| TACGGTGGTGTGCCATACTA+TGG | 0.417463 | 8.2:-5822708 | MS.gene070266:CDS |
| GAATCAACAATAACAATTCC+AGG | 0.432239 | 8.2:-5825261 | MS.gene070266:intron |
| GATGCATCAGCTGCCAAAAC+TGG | 0.451635 | 8.2:-5825340 | MS.gene070266:CDS |
| GTCCTGCTGCTCCTAAAAGT+TGG | 0.462508 | 8.2:+5825591 | None:intergenic |
| GCCAAAACTGGTGGTAGAAT+TGG | 0.463723 | 8.2:-5825328 | MS.gene070266:CDS |
| CCACGGGTGGCGCCTCCACT+AGG | 0.472801 | 8.2:-5822744 | MS.gene070266:CDS |
| ACTATGGTGGTGGTTGGGGA+TGG | 0.480924 | 8.2:-5822692 | MS.gene070266:CDS |
| CTCCACTAGGTGGTGGATAC+GGG | 0.491592 | 8.2:-5822731 | MS.gene070266:CDS |
| TTGTTGATTCTTGGTGAGGA+AGG | 0.491949 | 8.2:+5825274 | None:intergenic |
| GCTGCTGGTGTGTTAACGTT+TGG | 0.494174 | 8.2:-5825373 | MS.gene070266:CDS |
| GCAATGATTGCAGTGGCTGC+TGG | 0.497359 | 8.2:-5825388 | MS.gene070266:CDS |
| CCGAGTGTTGCAGTAGGCGT+TGG | 0.513639 | 8.2:-5822642 | MS.gene070266:CDS |
| GTTGCAGTAGGCGTTGGAGG+TGG | 0.519811 | 8.2:-5822636 | MS.gene070266:CDS |
| AGTGTTGCAGTAGGCGTTGG+AGG | 0.520000 | 8.2:-5822639 | MS.gene070266:CDS |
| AAAGTTGGGTTAAGAAGTGT+TGG | 0.530509 | 8.2:+5825606 | None:intergenic |
| GTGGCGCCTCCACTAGGTGG+TGG | 0.533635 | 8.2:-5822738 | MS.gene070266:CDS |
| GCAGTTGTGAGGAAATTCTT+GGG | 0.538440 | 8.2:-5822570 | MS.gene070266:CDS |
| CTAGGTGGTGGATACGGGTA+CGG | 0.541215 | 8.2:-5822726 | MS.gene070266:CDS |
| GAAGTGTTGGTGAAGAGATG+AGG | 0.545411 | 8.2:+5825619 | None:intergenic |
| TGTTGATTCTTGGTGAGGAA+GGG | 0.549367 | 8.2:+5825275 | None:intergenic |
| CCGTGGATTTATATAGATGT+TGG | 0.558960 | 8.2:+5822761 | None:intergenic |
| CCTACTGCAACACTCGGACC+TGG | 0.565214 | 8.2:+5822648 | None:intergenic |
| GCGAGGAGCGGATGATCTGA+AGG | 0.565349 | 8.2:+5825297 | None:intergenic |
| GTGCTGCTGCTGCAGTTGTG+AGG | 0.568041 | 8.2:-5822581 | MS.gene070266:CDS |
| CCTAGTGGAGGCGCCACCCG+TGG | 0.572068 | 8.2:+5822744 | None:intergenic |
| CCAGGTCCGAGTGTTGCAGT+AGG | 0.586325 | 8.2:-5822648 | MS.gene070266:CDS |
| GGAGTTGAAGATTGTTGTTG+TGG | 0.590399 | 8.2:+5825531 | None:intergenic |
| ATTCTTGGTGAGGAAGGGCG+AGG | 0.590888 | 8.2:+5825280 | None:intergenic |
| AAAACTGGTGGTAGAATTGG+TGG | 0.598132 | 8.2:-5825325 | MS.gene070266:CDS |
| GAGGAAGCTTTGCTGTGACA+AGG | 0.599879 | 8.2:+5825638 | None:intergenic |
| CCAACGCCTACTGCAACACT+CGG | 0.613463 | 8.2:+5822642 | None:intergenic |
| GTTATTGTTGATTCTTGGTG+AGG | 0.615397 | 8.2:+5825270 | None:intergenic |
| CCAACATCTATATAAATCCA+CGG | 0.616856 | 8.2:-5822761 | MS.gene070266:CDS |
| TGGTGAGGAAGGGCGAGGAG+CGG | 0.629460 | 8.2:+5825285 | None:intergenic |
| CAACATCTATATAAATCCAC+GGG | 0.636919 | 8.2:-5822760 | MS.gene070266:CDS |
| GGTGTGCCATACTATGGTGG+TGG | 0.643399 | 8.2:-5822702 | MS.gene070266:CDS |
| CGGGTGGCGCCTCCACTAGG+TGG | 0.653412 | 8.2:-5822741 | MS.gene070266:CDS |
| AAAGTTAGCAATGATTGCAG+TGG | 0.664147 | 8.2:-5825395 | MS.gene070266:CDS |
| CATCTATATAAATCCACGGG+TGG | 0.671598 | 8.2:-5822757 | MS.gene070266:CDS |
| GGTGGTGGATACGGGTACGG+TGG | 0.672411 | 8.2:-5822723 | MS.gene070266:CDS |
| GTTGTGAGGAAATTCTTGGG+AGG | 0.683288 | 8.2:-5822567 | MS.gene070266:CDS |
| TACCCGTATCCACCACCTAG+TGG | 0.684635 | 8.2:+5822729 | None:intergenic |
| CAGCAGGACGAGGAAGACTG+TGG | 0.702489 | 8.2:-5825577 | MS.gene070266:CDS |
| GCATCAGCTGCCAAAACTGG+TGG | 0.706688 | 8.2:-5825337 | MS.gene070266:CDS |
| CCGTATCCACCACCTAGTGG+AGG | 0.722573 | 8.2:+5822732 | None:intergenic |
| GGTGGTGTGCCATACTATGG+TGG | 0.778885 | 8.2:-5822705 | MS.gene070266:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | AAAAATAGAAACAAAAAAAT+TGG | + | chr8.2:5825061-5825080 | None:intergenic | 10.0% |
| !! | TGATTATACTATATACTTAT+AGG | - | chr8.2:5822997-5823016 | MS.gene070266:intron | 15.0% |
| !!! | TATTTTTATATAGACAATGT+TGG | - | chr8.2:5825074-5825093 | MS.gene070266:intron | 15.0% |
| !! | AAGGAAAAATAAATGTTTCT+AGG | - | chr8.2:5822952-5822971 | MS.gene070266:intron | 20.0% |
| !! | AATATGATCTCTAATGATAT+AGG | + | chr8.2:5825233-5825252 | None:intergenic | 20.0% |
| !! | AATGAAATCTCTTTCATAAT+TGG | - | chr8.2:5825259-5825278 | MS.gene070266:intron | 20.0% |
| !! | ATTTAAAAAGTTCGAACAAA+TGG | - | chr8.2:5824008-5824027 | MS.gene070266:intron | 20.0% |
| !! | GTAAATAGGTAATTTACTTT+GGG | + | chr8.2:5823578-5823597 | None:intergenic | 20.0% |
| !! | TACAATTATCAACAAATACA+AGG | + | chr8.2:5823258-5823277 | None:intergenic | 20.0% |
| !!! | GACTAAACATTTTTCTATTT+TGG | + | chr8.2:5825012-5825031 | None:intergenic | 20.0% |
| !!! | TAGTTGTATTTTTCTTCTTT+GGG | - | chr8.2:5823365-5823384 | MS.gene070266:intron | 20.0% |
| !!! | TTCATTTTTGTTAGTTGTTT+AGG | - | chr8.2:5823427-5823446 | MS.gene070266:intron | 20.0% |
| !!! | TTTAGTCTTATTCTGAAAAT+AGG | - | chr8.2:5825025-5825044 | MS.gene070266:intron | 20.0% |
| ! | AAAAAAAAGAAAGCCTCATT+TGG | + | chr8.2:5824125-5824144 | None:intergenic | 25.0% |
| ! | AAATCTCTTTCATAATTGGA+AGG | - | chr8.2:5825263-5825282 | MS.gene070266:CDS | 25.0% |
| ! | AACCATTAGAAAAGATTTAG+AGG | - | chr8.2:5824577-5824596 | MS.gene070266:intron | 25.0% |
| ! | ACTAAGGAGTTTATAAATGA+TGG | + | chr8.2:5824045-5824064 | None:intergenic | 25.0% |
| ! | AGTTTAATTATGATACCTAC+AGG | + | chr8.2:5823218-5823237 | None:intergenic | 25.0% |
| ! | GAACAAACAGGTAAATAAAA+AGG | + | chr8.2:5824148-5824167 | None:intergenic | 25.0% |
| ! | GGTAAATAGGTAATTTACTT+TGG | + | chr8.2:5823579-5823598 | None:intergenic | 25.0% |
| ! | GTAGAAATATATCTGTTAGT+TGG | - | chr8.2:5824880-5824899 | MS.gene070266:intron | 25.0% |
| ! | TAATACTACCTAGAGAAAAT+AGG | + | chr8.2:5823066-5823085 | None:intergenic | 25.0% |
| ! | TCATGTTTACGATATTAGTT+GGG | - | chr8.2:5823487-5823506 | MS.gene070266:intron | 25.0% |
| ! | TGTAGGTATCATAATTAAAC+TGG | - | chr8.2:5823217-5823236 | MS.gene070266:intron | 25.0% |
| !! | GTAGTTGTATTTTTCTTCTT+TGG | - | chr8.2:5823364-5823383 | MS.gene070266:intron | 25.0% |
| !! | GTTCTCTAAATTAAGAGTTT+TGG | + | chr8.2:5823935-5823954 | None:intergenic | 25.0% |
| !! | GTTTCTCTAATAGTTTTCTT+AGG | + | chr8.2:5824560-5824579 | None:intergenic | 25.0% |
| !! | TTTTGATGTAGTTACCTTAA+TGG | + | chr8.2:5822671-5822690 | None:intergenic | 25.0% |
| !!! | GAATTGTTATTGTTGATTCT+TGG | + | chr8.2:5822916-5822935 | None:intergenic | 25.0% |
| !!! | TAGAAAAGTTGGTAGAAAAT+AGG | - | chr8.2:5824435-5824454 | MS.gene070266:intron | 25.0% |
| !!! | TAGGGCTTTCATTTTTTTTA+GGG | - | chr8.2:5824804-5824823 | MS.gene070266:intron | 25.0% |
| !!! | TTAGGGCTTTCATTTTTTTT+AGG | - | chr8.2:5824803-5824822 | MS.gene070266:intron | 25.0% |
| AACAATCTTCAACTCCATTA+AGG | - | chr8.2:5822654-5822673 | MS.gene070266:CDS | 30.0% | |
| AAGAAGAATGAGAACAAGTT+AGG | - | chr8.2:5822760-5822779 | MS.gene070266:CDS | 30.0% | |
| CAACATCTATATAAATCCAC+GGG | - | chr8.2:5825418-5825437 | MS.gene070266:CDS | 30.0% | |
| CAACTAATATCGTAAACATG+AGG | + | chr8.2:5823488-5823507 | None:intergenic | 30.0% | |
| CCAACATCTATATAAATCCA+CGG | - | chr8.2:5825417-5825436 | MS.gene070266:CDS | 30.0% | |
| CCAACTGAGATATATACTTA+AGG | - | chr8.2:5825177-5825196 | MS.gene070266:intron | 30.0% | |
| CCTTAAGTATATATCTCAGT+TGG | + | chr8.2:5825180-5825199 | None:intergenic | 30.0% | |
| CTAACAAAAATGAAGACTTG+TGG | + | chr8.2:5823421-5823440 | None:intergenic | 30.0% | |
| CTAGAGAAAATAGGTTAGAA+TGG | + | chr8.2:5823057-5823076 | None:intergenic | 30.0% | |
| CTCATGTTTACGATATTAGT+TGG | - | chr8.2:5823486-5823505 | MS.gene070266:intron | 30.0% | |
| GAATACATGTACTGTAAACA+GGG | + | chr8.2:5823902-5823921 | None:intergenic | 30.0% | |
| GAATCAACAATAACAATTCC+AGG | - | chr8.2:5822917-5822936 | MS.gene070266:intron | 30.0% | |
| GAATTCCAAAATTTGCATCA+AGG | + | chr8.2:5823128-5823147 | None:intergenic | 30.0% | |
| GTTCTATCAAAGACCATATT+TGG | + | chr8.2:5824617-5824636 | None:intergenic | 30.0% | |
| GTTTGAACTTGAGTATTAGA+GGG | - | chr8.2:5823462-5823481 | MS.gene070266:intron | 30.0% | |
| TACCAGATGAATATTACAGA+AGG | - | chr8.2:5824847-5824866 | MS.gene070266:intron | 30.0% | |
| TCTTTGATAGAACATTATGG+CGG | - | chr8.2:5824624-5824643 | MS.gene070266:intron | 30.0% | |
| TGAAAGCCCTAAAATTTGAA+AGG | + | chr8.2:5824795-5824814 | None:intergenic | 30.0% | |
| TGAATACATGTACTGTAAAC+AGG | + | chr8.2:5823903-5823922 | None:intergenic | 30.0% | |
| TGGTCTTTGATAGAACATTA+TGG | - | chr8.2:5824621-5824640 | MS.gene070266:intron | 30.0% | |
| TGTTTGAACTTGAGTATTAG+AGG | - | chr8.2:5823461-5823480 | MS.gene070266:intron | 30.0% | |
| TTCCAGGTATCTAACAAAAA+AGG | - | chr8.2:5822933-5822952 | MS.gene070266:intron | 30.0% | |
| ! | CATTCTAACCTATTTTCTCT+AGG | - | chr8.2:5823055-5823074 | MS.gene070266:intron | 30.0% |
| ! | GACCTCTAAATCTTTTCTAA+TGG | + | chr8.2:5824582-5824601 | None:intergenic | 30.0% |
| ! | GATATATTTCTACACTCCAT+TGG | + | chr8.2:5824873-5824892 | None:intergenic | 30.0% |
| ! | TCTACCAACTTTTCTACTAT+AGG | + | chr8.2:5824431-5824450 | None:intergenic | 30.0% |
| ! | TTTGCTTTGTTATACTTGCA+TGG | - | chr8.2:5822712-5822731 | MS.gene070266:CDS | 30.0% |
| !!! | CTGCTTCTGTTTATGTTTTT+TGG | - | chr8.2:5825575-5825594 | MS.gene070266:CDS | 30.0% |
| !!! | GATATTCGGTTTTTTCTTCT+AGG | - | chr8.2:5824734-5824753 | MS.gene070266:intron | 30.0% |
| !!! | TTCCTTTTTTGTTAGATACC+TGG | + | chr8.2:5822938-5822957 | None:intergenic | 30.0% |
| AAAGTTAGCAATGATTGCAG+TGG | - | chr8.2:5822783-5822802 | MS.gene070266:intron | 35.0% | |
| AACTTTCCTTTCAGCTTAAG+TGG | + | chr8.2:5824233-5824252 | None:intergenic | 35.0% | |
| AAGAAGAGTAGATCAAATGG+AGG | - | chr8.2:5824505-5824524 | MS.gene070266:intron | 35.0% | |
| ACAACAACTATAGCGACAAA+AGG | + | chr8.2:5823286-5823305 | None:intergenic | 35.0% | |
| ACTAAAGAGGGTTGTACATT+TGG | - | chr8.2:5823515-5823534 | MS.gene070266:intron | 35.0% | |
| AGACTAGACATGATAGGATT+AGG | - | chr8.2:5824372-5824391 | MS.gene070266:intron | 35.0% | |
| AGATTTAGAGGTCAATGAGT+TGG | - | chr8.2:5824589-5824608 | MS.gene070266:intron | 35.0% | |
| AGCACCTATAGTAGAAAAGT+TGG | - | chr8.2:5824424-5824443 | MS.gene070266:intron | 35.0% | |
| AGCTGAAAGGAAAGTTCTAT+CGG | - | chr8.2:5824237-5824256 | MS.gene070266:intron | 35.0% | |
| CCGTGGATTTATATAGATGT+TGG | + | chr8.2:5825420-5825439 | None:intergenic | 35.0% | |
| CGAAATTAAGAAGTCTCACT+CGG | + | chr8.2:5824082-5824101 | None:intergenic | 35.0% | |
| CTGTTTGTCACGTAGATATT+CGG | - | chr8.2:5824720-5824739 | MS.gene070266:intron | 35.0% | |
| GAAAATAGGCTTAGATGGTT+TGG | - | chr8.2:5824449-5824468 | MS.gene070266:intron | 35.0% | |
| GGTAAGAAGAGTAGATCAAA+TGG | - | chr8.2:5824502-5824521 | MS.gene070266:intron | 35.0% | |
| GGTATGCGTTAGAAATTAAG+AGG | + | chr8.2:5824991-5825010 | None:intergenic | 35.0% | |
| GGTGAAAACAAGGAAAACTA+AGG | + | chr8.2:5824061-5824080 | None:intergenic | 35.0% | |
| TACGTGACTTAAGTTACGTT+AGG | + | chr8.2:5823632-5823651 | None:intergenic | 35.0% | |
| TAGTTGGCATTCTTAAGAGT+AGG | - | chr8.2:5824896-5824915 | MS.gene070266:intron | 35.0% | |
| TCCAACAAAATGAGACAGAT+AGG | + | chr8.2:5825357-5825376 | None:intergenic | 35.0% | |
| TGAATATTACAGAAGGCCAA+TGG | - | chr8.2:5824854-5824873 | MS.gene070266:intron | 35.0% | |
| TGCAACTACAAACTATGCTT+AGG | + | chr8.2:5823150-5823169 | None:intergenic | 35.0% | |
| TGGTAGAAAATAGGCTTAGA+TGG | - | chr8.2:5824444-5824463 | MS.gene070266:intron | 35.0% | |
| TGTTTGTTCGTATTCAAGCT+GGG | - | chr8.2:5824159-5824178 | MS.gene070266:intron | 35.0% | |
| TTCCAAAATTTGCATCAAGG+AGG | + | chr8.2:5823125-5823144 | None:intergenic | 35.0% | |
| TTGATCTACTCTTCTTACCA+CGG | + | chr8.2:5824501-5824520 | None:intergenic | 35.0% | |
| ! | AAAGTACCACTTAAGCTGAA+AGG | - | chr8.2:5824224-5824243 | MS.gene070266:intron | 35.0% |
| ! | AAAGTTGGGTTAAGAAGTGT+TGG | + | chr8.2:5822575-5822594 | None:intergenic | 35.0% |
| ! | ACCTATCTGTCTCATTTTGT+TGG | - | chr8.2:5825353-5825372 | MS.gene070266:CDS | 35.0% |
| ! | ACCTGCACCTTTCAAATTTT+AGG | - | chr8.2:5824785-5824804 | MS.gene070266:intron | 35.0% |
| ! | CAATGAGTTGGATCCAAATA+TGG | - | chr8.2:5824601-5824620 | MS.gene070266:intron | 35.0% |
| ! | CACTTCTTAACCCAACTTTT+AGG | - | chr8.2:5822576-5822595 | MS.gene070266:CDS | 35.0% |
| ! | CCTGCACCTTTCAAATTTTA+GGG | - | chr8.2:5824786-5824805 | MS.gene070266:intron | 35.0% |
| !! | AGTCCATTGGTTTGAACTAT+TGG | + | chr8.2:5824926-5824945 | None:intergenic | 35.0% |
| !! | ATGGAGAATTTTGAGTCCAT+TGG | + | chr8.2:5824939-5824958 | None:intergenic | 35.0% |
| !! | GTTATTGTTGATTCTTGGTG+AGG | + | chr8.2:5822911-5822930 | None:intergenic | 35.0% |
| !!! | ACATGGAAGCAGTTTTAAGT+AGG | + | chr8.2:5825148-5825167 | None:intergenic | 35.0% |
| AAAACTGGTGGTAGAATTGG+TGG | - | chr8.2:5822853-5822872 | MS.gene070266:intron | 40.0% | |
| AAAGAGGGTTGTACATTTGG+TGG | - | chr8.2:5823518-5823537 | MS.gene070266:intron | 40.0% | |
| AAAGCCTCATTTGGACTTGA+GGG | + | chr8.2:5824116-5824135 | None:intergenic | 40.0% | |
| ACATCATTAGAGAGAGAGTG+GGG | - | chr8.2:5824399-5824418 | MS.gene070266:intron | 40.0% | |
| AGTCAGGTTAAAAGAGGTAG+AGG | - | chr8.2:5824530-5824549 | MS.gene070266:intron | 40.0% | |
| ATACCTACAGGCATCAATGT+CGG | + | chr8.2:5823206-5823225 | None:intergenic | 40.0% | |
| CAGCTTGAATACGAACAAAC+AGG | + | chr8.2:5824160-5824179 | None:intergenic | 40.0% | |
| CATCTATATAAATCCACGGG+TGG | - | chr8.2:5825421-5825440 | MS.gene070266:CDS | 40.0% | |
| CCTGGTGCAAAGAAAGAAAA+TGG | + | chr8.2:5825515-5825534 | None:intergenic | 40.0% | |
| CGAATATCTACGTGACAAAC+AGG | + | chr8.2:5824722-5824741 | None:intergenic | 40.0% | |
| CTGTTTGTTCGTATTCAAGC+TGG | - | chr8.2:5824158-5824177 | MS.gene070266:intron | 40.0% | |
| GACATCATTAGAGAGAGAGT+GGG | - | chr8.2:5824398-5824417 | MS.gene070266:intron | 40.0% | |
| GCAGTTGTGAGGAAATTCTT+GGG | - | chr8.2:5825608-5825627 | MS.gene070266:CDS | 40.0% | |
| GGCCTTCTGTAATATTCATC+TGG | + | chr8.2:5824852-5824871 | None:intergenic | 40.0% | |
| GGTCCAATAGTTCAAACCAA+TGG | - | chr8.2:5824920-5824939 | MS.gene070266:intron | 40.0% | |
| GTACTGTAAACAGGGAATGA+AGG | + | chr8.2:5823894-5823913 | None:intergenic | 40.0% | |
| GTGGGAACATGGAAAAGTAA+TGG | + | chr8.2:5824958-5824977 | None:intergenic | 40.0% | |
| GTGGTAAGACTAGACATGAT+AGG | - | chr8.2:5824366-5824385 | MS.gene070266:intron | 40.0% | |
| TAACATGCGTAGGGGTAAAT+AGG | + | chr8.2:5823592-5823611 | None:intergenic | 40.0% | |
| TGACATCATTAGAGAGAGAG+TGG | - | chr8.2:5824397-5824416 | MS.gene070266:intron | 40.0% | |
| TGCAGTTGTGAGGAAATTCT+TGG | - | chr8.2:5825607-5825626 | MS.gene070266:CDS | 40.0% | |
| TTGGCATTCTTAAGAGTAGG+AGG | - | chr8.2:5824899-5824918 | MS.gene070266:intron | 40.0% | |
| TTTCGTATCTGTATGTCGAC+AGG | - | chr8.2:5825393-5825412 | MS.gene070266:CDS | 40.0% | |
| ! | ACCAATTCTACCACCAGTTT+TGG | + | chr8.2:5822854-5822873 | None:intergenic | 40.0% |
| ! | CCATTTTCTTTCTTTGCACC+AGG | - | chr8.2:5825512-5825531 | MS.gene070266:intron | 40.0% |
| ! | CCCTAAAATTTGAAAGGTGC+AGG | + | chr8.2:5824789-5824808 | None:intergenic | 40.0% |
| ! | CTCCTCCTTGATGCAAATTT+TGG | - | chr8.2:5823120-5823139 | MS.gene070266:intron | 40.0% |
| ! | GGAGTTGAAGATTGTTGTTG+TGG | + | chr8.2:5822650-5822669 | None:intergenic | 40.0% |
| ! | TGTACAACCCTCTTTAGTTC+AGG | + | chr8.2:5823513-5823532 | None:intergenic | 40.0% |
| ! | TTTTCTTCTAGGCTTGTGAG+AGG | - | chr8.2:5824745-5824764 | MS.gene070266:intron | 40.0% |
| !! | GTTGTTGTTTGTCTCCTTGT+CGG | - | chr8.2:5823298-5823317 | MS.gene070266:intron | 40.0% |
| !! | TCAGTTGGTGAGATAAGACA+TGG | + | chr8.2:5825165-5825184 | None:intergenic | 40.0% |
| !! | TGTTGATTCTTGGTGAGGAA+GGG | + | chr8.2:5822906-5822925 | None:intergenic | 40.0% |
| !! | TTACTTTTCCATGTTCCCAC+AGG | - | chr8.2:5824958-5824977 | MS.gene070266:intron | 40.0% |
| !! | TTGTTGATTCTTGGTGAGGA+AGG | + | chr8.2:5822907-5822926 | None:intergenic | 40.0% |
| !! | TTTTTAGGGACCAGTGAATG+AGG | - | chr8.2:5824818-5824837 | MS.gene070266:intron | 40.0% |
| AACGCCTTATCCCACTAAGT+GGG | + | chr8.2:5824671-5824690 | None:intergenic | 45.0% | |
| AAGCCTCATTTGGACTTGAG+GGG | + | chr8.2:5824115-5824134 | None:intergenic | 45.0% | |
| ACCGGCAATGTTGTATGGTA+CGG | - | chr8.2:5824271-5824290 | MS.gene070266:intron | 45.0% | |
| AGAGCAAGAAGACCCAGTTA+CGG | + | chr8.2:5823343-5823362 | None:intergenic | 45.0% | |
| AGATCAAATGGAGGAGAGTC+AGG | - | chr8.2:5824514-5824533 | MS.gene070266:intron | 45.0% | |
| AGTTGGGCCTGAACTAAAGA+GGG | - | chr8.2:5823503-5823522 | MS.gene070266:intron | 45.0% | |
| CATCATTAGAGAGAGAGTGG+GGG | - | chr8.2:5824400-5824419 | MS.gene070266:intron | 45.0% | |
| CGAGAGTAAAGTAAGCGTAG+CGG | - | chr8.2:5824319-5824338 | MS.gene070266:intron | 45.0% | |
| CGCTTACTTTACTCTCGTGT+TGG | + | chr8.2:5824316-5824335 | None:intergenic | 45.0% | |
| CTTATCGCACAAAACACCTG+AGG | + | chr8.2:5824204-5824223 | None:intergenic | 45.0% | |
| GAAAGCCTCATTTGGACTTG+AGG | + | chr8.2:5824117-5824136 | None:intergenic | 45.0% | |
| GAAGACTTCTGACCGTAACT+GGG | - | chr8.2:5823328-5823347 | MS.gene070266:intron | 45.0% | |
| GAGGAGAGTCAGGTTAAAAG+AGG | - | chr8.2:5824524-5824543 | MS.gene070266:intron | 45.0% | |
| GCCAAAACTGGTGGTAGAAT+TGG | - | chr8.2:5822850-5822869 | MS.gene070266:intron | 45.0% | |
| GGGAATGAGCATCACTGTTT+GGG | + | chr8.2:5823558-5823577 | None:intergenic | 45.0% | |
| GTTGTGAGGAAATTCTTGGG+AGG | - | chr8.2:5825611-5825630 | MS.gene070266:CDS | 45.0% | |
| TAGTTGGGCCTGAACTAAAG+AGG | - | chr8.2:5823502-5823521 | MS.gene070266:intron | 45.0% | |
| TCACTGTTTGGGTAAAGAGC+AGG | + | chr8.2:5823547-5823566 | None:intergenic | 45.0% | |
| TCCGTACCATACAACATTGC+CGG | + | chr8.2:5824275-5824294 | None:intergenic | 45.0% | |
| TCCTGCTGCTCCTAAAAGTT+GGG | + | chr8.2:5822589-5822608 | None:intergenic | 45.0% | |
| TGAAGACTTCTGACCGTAAC+TGG | - | chr8.2:5823327-5823346 | MS.gene070266:intron | 45.0% | |
| TGCGCATGTTAACATGCGTA+GGG | + | chr8.2:5823601-5823620 | None:intergenic | 45.0% | |
| TGGGAATGAGCATCACTGTT+TGG | + | chr8.2:5823559-5823578 | None:intergenic | 45.0% | |
| TGTTGTATGGTACGGAGTGT+TGG | - | chr8.2:5824279-5824298 | MS.gene070266:intron | 45.0% | |
| TTCAAGCTGGGTGGTTGAAA+TGG | - | chr8.2:5824171-5824190 | MS.gene070266:intron | 45.0% | |
| TTGAAATGGAGAAGAGCCTC+AGG | - | chr8.2:5824185-5824204 | MS.gene070266:intron | 45.0% | |
| TTGCGCATGTTAACATGCGT+AGG | + | chr8.2:5823602-5823621 | None:intergenic | 45.0% | |
| TTGTTCGTATTCAAGCTGGG+TGG | - | chr8.2:5824162-5824181 | MS.gene070266:intron | 45.0% | |
| ! | AGTCTCACTCGGTGAAAACA+AGG | + | chr8.2:5824071-5824090 | None:intergenic | 45.0% |
| ! | GTTGTATGGTACGGAGTGTT+GGG | - | chr8.2:5824280-5824299 | MS.gene070266:intron | 45.0% |
| !! | GAAGTGTTGGTGAAGAGATG+AGG | + | chr8.2:5822562-5822581 | None:intergenic | 45.0% |
| !! | CTTAAATATTATATATAAAT+AGG | - | chr8.2:5822737-5822756 | MS.gene070266:CDS | 5.0% |
| ACGCCTTATCCCACTAAGTG+GGG | + | chr8.2:5824670-5824689 | None:intergenic | 50.0% | |
| AGCCTCATTTGGACTTGAGG+GGG | + | chr8.2:5824114-5824133 | None:intergenic | 50.0% | |
| AGGATGTTGCGTTGGATGAG+TGG | - | chr8.2:5824347-5824366 | MS.gene070266:intron | 50.0% | |
| AGTCTTCACCAAAGCCGACA+AGG | + | chr8.2:5823315-5823334 | None:intergenic | 50.0% | |
| ATTAAGAGGTCCCACACCTG+TGG | + | chr8.2:5824977-5824996 | None:intergenic | 50.0% | |
| CAACGCCTTATCCCACTAAG+TGG | + | chr8.2:5824672-5824691 | None:intergenic | 50.0% | |
| CACCAAAACAGCAATGGCAG+TGG | - | chr8.2:5823849-5823868 | MS.gene070266:intron | 50.0% | |
| CAGTGGCACCAAAACAGCAA+TGG | - | chr8.2:5823843-5823862 | MS.gene070266:intron | 50.0% | |
| CTTATCCCACTAAGTGGGGT+CGG | + | chr8.2:5824666-5824685 | None:intergenic | 50.0% | |
| GATGCATCAGCTGCCAAAAC+TGG | - | chr8.2:5822838-5822857 | MS.gene070266:intron | 50.0% | |
| GCGCATGTTAACATGCGTAG+GGG | + | chr8.2:5823600-5823619 | None:intergenic | 50.0% | |
| GCTGCTGGTGTGTTAACGTT+TGG | - | chr8.2:5822805-5822824 | MS.gene070266:intron | 50.0% | |
| GGTATCAGAGCCTCATTCAC+TGG | + | chr8.2:5824831-5824850 | None:intergenic | 50.0% | |
| GTCAGACCGGCAATGTTGTA+TGG | - | chr8.2:5824266-5824285 | MS.gene070266:intron | 50.0% | |
| GTCCTGCTGCTCCTAAAAGT+TGG | + | chr8.2:5822590-5822609 | None:intergenic | 50.0% | |
| TACGGTGGTGTGCCATACTA+TGG | - | chr8.2:5825470-5825489 | MS.gene070266:intron | 50.0% | |
| TCTTCTTACCACGGCGTCTA+CGG | + | chr8.2:5824492-5824511 | None:intergenic | 50.0% | |
| TTAAGAGGTCCCACACCTGT+GGG | + | chr8.2:5824976-5824995 | None:intergenic | 50.0% | |
| TTCCATGTTCCCACAGGTGT+GGG | - | chr8.2:5824964-5824983 | MS.gene070266:intron | 50.0% | |
| TTTCCATGTTCCCACAGGTG+TGG | - | chr8.2:5824963-5824982 | MS.gene070266:intron | 50.0% | |
| ! | AAGTAAGCGTAGCGGAGATG+AGG | - | chr8.2:5824327-5824346 | MS.gene070266:intron | 50.0% |
| ! | GAGGAAGCTTTGCTGTGACA+AGG | + | chr8.2:5822543-5822562 | None:intergenic | 50.0% |
| ! | TTTGCATCAAGGAGGAGCGT+TGG | + | chr8.2:5823117-5823136 | None:intergenic | 50.0% |
| !! | ACCCAACTTTTAGGAGCAGC+AGG | - | chr8.2:5822585-5822604 | MS.gene070266:CDS | 50.0% |
| !! | CCATACTATGGTGGTGGTTG+GGG | - | chr8.2:5825482-5825501 | MS.gene070266:intron | 50.0% |
| !! | GACTTAACTTGCGTTGCTGC+TGG | - | chr8.2:5823793-5823812 | MS.gene070266:intron | 50.0% |
| !! | GCCATACTATGGTGGTGGTT+GGG | - | chr8.2:5825481-5825500 | MS.gene070266:intron | 50.0% |
| !! | GTTTGTCTCCTTGTCGGCTT+TGG | - | chr8.2:5823304-5823323 | MS.gene070266:intron | 50.0% |
| !! | TGCCATACTATGGTGGTGGT+TGG | - | chr8.2:5825480-5825499 | MS.gene070266:intron | 50.0% |
| !!! | TGCCACTGCCATTGCTGTTT+TGG | + | chr8.2:5823854-5823873 | None:intergenic | 50.0% |
| ACTAAGTGGGGTCGGCTACA+TGG | + | chr8.2:5824658-5824677 | None:intergenic | 55.0% | |
| ATGTAGCCGACCCCACTTAG+TGG | - | chr8.2:5824657-5824676 | MS.gene070266:intron | 55.0% | |
| ATTCTTGGTGAGGAAGGGCG+AGG | + | chr8.2:5822901-5822920 | None:intergenic | 55.0% | |
| CCAACGCCTACTGCAACACT+CGG | + | chr8.2:5825539-5825558 | None:intergenic | 55.0% | |
| CCCCAACCACCACCATAGTA+TGG | + | chr8.2:5825485-5825504 | None:intergenic | 55.0% | |
| CCTACAGGCATCAATGTCGG+AGG | + | chr8.2:5823203-5823222 | None:intergenic | 55.0% | |
| CCTCCGACATTGATGCCTGT+AGG | - | chr8.2:5823200-5823219 | MS.gene070266:intron | 55.0% | |
| CGACCCCACTTAGTGGGATA+AGG | - | chr8.2:5824664-5824683 | MS.gene070266:intron | 55.0% | |
| CGGAGATGAGGATGTTGCGT+TGG | - | chr8.2:5824339-5824358 | MS.gene070266:intron | 55.0% | |
| CTATCGGACAGCAGTCAGAC+CGG | - | chr8.2:5824253-5824272 | MS.gene070266:intron | 55.0% | |
| CTGCTCGCAACAGAACAGAC+TGG | - | chr8.2:5823820-5823839 | MS.gene070266:intron | 55.0% | |
| CTTCTTACCACGGCGTCTAC+GGG | + | chr8.2:5824491-5824510 | None:intergenic | 55.0% | |
| GCAACAGAACAGACTGGCAG+TGG | - | chr8.2:5823826-5823845 | MS.gene070266:intron | 55.0% | |
| GCAATGATTGCAGTGGCTGC+TGG | - | chr8.2:5822790-5822809 | MS.gene070266:intron | 55.0% | |
| GCATCAGCTGCCAAAACTGG+TGG | - | chr8.2:5822841-5822860 | MS.gene070266:intron | 55.0% | |
| GCCTCATTTGGACTTGAGGG+GGG | + | chr8.2:5824113-5824132 | None:intergenic | 55.0% | |
| GCTACGTGACTTAAGCCACG+CGG | - | chr8.2:5823700-5823719 | MS.gene070266:intron | 55.0% | |
| GGTGGTGTGCCATACTATGG+TGG | - | chr8.2:5825473-5825492 | MS.gene070266:intron | 55.0% | |
| GGTGTGCCATACTATGGTGG+TGG | - | chr8.2:5825476-5825495 | MS.gene070266:intron | 55.0% | |
| TACCCGTATCCACCACCTAG+TGG | + | chr8.2:5825452-5825471 | None:intergenic | 55.0% | |
| TCCCCCCTCAAGTCCAAATG+AGG | - | chr8.2:5824109-5824128 | MS.gene070266:intron | 55.0% | |
| TGTAGCCGACCCCACTTAGT+GGG | - | chr8.2:5824658-5824677 | MS.gene070266:intron | 55.0% | |
| !! | ACTATGGTGGTGGTTGGGGA+TGG | - | chr8.2:5825486-5825505 | MS.gene070266:intron | 55.0% |
| !! | AGTGTTGCAGTAGGCGTTGG+AGG | - | chr8.2:5825539-5825558 | MS.gene070266:CDS | 55.0% |
| !! | CCTCCACTAGGTGGTGGATA+CGG | - | chr8.2:5825446-5825465 | MS.gene070266:intron | 55.0% |
| !! | CTAGGTGGTGGATACGGGTA+CGG | - | chr8.2:5825452-5825471 | MS.gene070266:intron | 55.0% |
| !! | CTCCACTAGGTGGTGGATAC+GGG | - | chr8.2:5825447-5825466 | MS.gene070266:intron | 55.0% |
| !! | CTTTTAGGAGCAGCAGGACG+AGG | - | chr8.2:5822591-5822610 | MS.gene070266:CDS | 55.0% |
| !! | GTATGGTACGGAGTGTTGGG+CGG | - | chr8.2:5824283-5824302 | MS.gene070266:intron | 55.0% |
| CAGCAGGACGAGGAAGACTG+TGG | - | chr8.2:5822601-5822620 | MS.gene070266:CDS | 60.0% | |
| CCGTATCCACCACCTAGTGG+AGG | + | chr8.2:5825449-5825468 | None:intergenic | 60.0% | |
| CCTACTGCAACACTCGGACC+TGG | + | chr8.2:5825533-5825552 | None:intergenic | 60.0% | |
| GAAGTACACAAGCAGCCGCG+TGG | + | chr8.2:5823718-5823737 | None:intergenic | 60.0% | |
| GCGAGGAGCGGATGATCTGA+AGG | + | chr8.2:5822884-5822903 | None:intergenic | 60.0% | |
| GTCCCACACCTGTGGGAACA+TGG | + | chr8.2:5824969-5824988 | None:intergenic | 60.0% | |
| ! | CCAGGTCCGAGTGTTGCAGT+AGG | - | chr8.2:5825530-5825549 | MS.gene070266:CDS | 60.0% |
| ! | CCGAGTGTTGCAGTAGGCGT+TGG | - | chr8.2:5825536-5825555 | MS.gene070266:CDS | 60.0% |
| ! | GAAAGGTGCAGGTAGCCGCA+TGG | + | chr8.2:5824778-5824797 | None:intergenic | 60.0% |
| ! | GTGCTGCTGCTGCAGTTGTG+AGG | - | chr8.2:5825597-5825616 | MS.gene070266:CDS | 60.0% |
| !! | GTTGCAGTAGGCGTTGGAGG+TGG | - | chr8.2:5825542-5825561 | MS.gene070266:CDS | 60.0% |
| CTAGGCTTGTGAGAGGCCCC+TGG | - | chr8.2:5824752-5824771 | MS.gene070266:intron | 65.0% | |
| GAGAAGACCCGTAGACGCCG+TGG | - | chr8.2:5824481-5824500 | MS.gene070266:intron | 65.0% | |
| TGCAGGTAGCCGCATGGCCA+GGG | + | chr8.2:5824772-5824791 | None:intergenic | 65.0% | |
| TGGTGAGGAAGGGCGAGGAG+CGG | + | chr8.2:5822896-5822915 | None:intergenic | 65.0% | |
| !! | GGTGGTGGATACGGGTACGG+TGG | - | chr8.2:5825455-5825474 | MS.gene070266:intron | 65.0% |
| GCAGGTAGCCGCATGGCCAG+GGG | + | chr8.2:5824771-5824790 | None:intergenic | 70.0% | |
| GTGAGAGGCCCCTGGCCATG+CGG | - | chr8.2:5824760-5824779 | MS.gene070266:intron | 70.0% | |
| GTGCAGGTAGCCGCATGGCC+AGG | + | chr8.2:5824773-5824792 | None:intergenic | 70.0% | |
| GTGGCGCCTCCACTAGGTGG+TGG | - | chr8.2:5825440-5825459 | MS.gene070266:intron | 70.0% | |
| CCACGGGTGGCGCCTCCACT+AGG | - | chr8.2:5825434-5825453 | MS.gene070266:intron | 75.0% | |
| CGGGTGGCGCCTCCACTAGG+TGG | - | chr8.2:5825437-5825456 | MS.gene070266:intron | 75.0% | |
| !! | CCTAGTGGAGGCGCCACCCG+TGG | + | chr8.2:5825437-5825456 | None:intergenic | 75.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr8.2 | gene | 5822533 | 5825667 | 5822533 | ID=MS.gene070266 |
| chr8.2 | mRNA | 5822533 | 5825667 | 5822533 | ID=MS.gene070266.t1;Parent=MS.gene070266 |
| chr8.2 | exon | 5825525 | 5825667 | 5825525 | ID=MS.gene070266.t1.exon1;Parent=MS.gene070266.t1 |
| chr8.2 | CDS | 5825525 | 5825667 | 5825525 | ID=cds.MS.gene070266.t1;Parent=MS.gene070266.t1 |
| chr8.2 | exon | 5825262 | 5825441 | 5825262 | ID=MS.gene070266.t1.exon2;Parent=MS.gene070266.t1 |
| chr8.2 | CDS | 5825262 | 5825441 | 5825262 | ID=cds.MS.gene070266.t1;Parent=MS.gene070266.t1 |
| chr8.2 | exon | 5822533 | 5822785 | 5822533 | ID=MS.gene070266.t1.exon3;Parent=MS.gene070266.t1 |
| chr8.2 | CDS | 5822533 | 5822785 | 5822533 | ID=cds.MS.gene070266.t1;Parent=MS.gene070266.t1 |
| Gene Sequence |
| Protein sequence |
