AlfalfaGEDB | MS.gene55270

M. sativa cultivar XinJiangDaYe / MS.gene55270

KEGG: K08901
GO: GO:0003674 GO:0005488 GO:0005509 GO:0005575 GO:0008150 GO:0008152 GO:0009521 GO:0009523 GO:0009654 GO:0009987 GO:0015979 GO:0019898 GO:0032991 GO:0043167 GO:0043169 GO:0044237 GO:0046872 GO:0098796 GO:0110165 GO:1902494 GO:1990204
PFAM: PF05757.14

Nr:

Query id	Subject id	identity %	alignment length	mismatches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
MS.gene55270.t1	AES96821.1	96.5	85	3	0	1	85	177	261	1.10E-36	162.2

Swissprot:

Query id	Subject id	identity %	alignment length	mismatches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
MS.gene55270.t1	Q9XI73	71.8	85	24	0	1	85	106	190	4.7e-28	124.8

Trembl:

Query id	Subject id	identity %	alignment length	mismatches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
MS.gene55270.t1	B7FN42	96.5	85	3	0	1	85	109	193	7.9e-37	162.2

TFs/TRs:

Gene ID	Type	Classification

Protein Kinases:

Gene ID	Type	Classification

Network:

Co-expression Network:

Gene1	Gene2	correlation coefficient	p_value	FDR
MS.gene049137	MS.gene55270	0.866379	2.98E-65	-1.69E-46
MS.gene049346	MS.gene55270	0.801756	7.75E-49	-1.69E-46
MS.gene049351	MS.gene55270	0.829543	4.85E-55	-1.69E-46
MS.gene049356	MS.gene55270	0.800549	1.37E-48	-1.69E-46
MS.gene049427	MS.gene55270	0.84329	1.54E-58	-1.69E-46
MS.gene049488	MS.gene55270	0.828278	9.83E-55	-1.69E-46
MS.gene049609	MS.gene55270	0.858784	6.50E-63	-1.69E-46
MS.gene049661	MS.gene55270	0.877165	7.82E-69	-1.69E-46
MS.gene049662	MS.gene55270	0.870273	1.65E-66	-1.69E-46
MS.gene049805	MS.gene55270	0.842091	3.20E-58	-1.69E-46
MS.gene049993	MS.gene55270	0.819458	1.15E-52	-1.69E-46
MS.gene050076	MS.gene55270	0.811288	7.55E-51	-1.69E-46
MS.gene050301	MS.gene55270	0.830878	2.29E-55	-1.69E-46
MS.gene050397	MS.gene55270	0.853588	2.16E-61	-1.69E-46
MS.gene050406	MS.gene55270	0.817479	3.23E-52	-1.69E-46
MS.gene050426	MS.gene55270	-0.809605	1.74E-50	-1.69E-46
MS.gene050432	MS.gene55270	0.81875	1.67E-52	-1.69E-46
MS.gene050464	MS.gene55270	0.843934	1.03E-58	-1.69E-46
MS.gene050529	MS.gene55270	0.850351	1.80E-60	-1.69E-46
MS.gene050593	MS.gene55270	0.855505	6.03E-62	-1.69E-46
MS.gene050625	MS.gene55270	0.806135	9.53E-50	-1.69E-46
MS.gene050670	MS.gene55270	0.906345	1.64E-80	-1.69E-46
MS.gene050747	MS.gene55270	0.827247	1.74E-54	-1.69E-46
MS.gene050772	MS.gene55270	0.835966	1.23E-56	-1.69E-46
MS.gene050783	MS.gene55270	0.806341	8.62E-50	-1.69E-46
MS.gene050950	MS.gene55270	0.822785	1.97E-53	-1.69E-46
MS.gene05101	MS.gene55270	0.840536	8.20E-58	-1.69E-46
MS.gene05105	MS.gene55270	0.899149	2.64E-77	-1.69E-46
MS.gene051387	MS.gene55270	0.871015	9.43E-67	-1.69E-46
MS.gene051525	MS.gene55270	0.861973	7.04E-64	-1.69E-46
MS.gene051582	MS.gene55270	0.865908	4.20E-65	-1.69E-46
MS.gene051588	MS.gene55270	0.80865	2.79E-50	-1.69E-46
MS.gene051605	MS.gene55270	0.816464	5.46E-52	-1.69E-46
MS.gene051666	MS.gene55270	0.840232	9.84E-58	-1.69E-46
MS.gene051692	MS.gene55270	0.805798	1.12E-49	-1.69E-46
MS.gene051877	MS.gene55270	0.818746	1.67E-52	-1.69E-46
MS.gene052011	MS.gene55270	-0.855977	4.39E-62	-1.69E-46
MS.gene052077	MS.gene55270	0.803914	2.78E-49	-1.69E-46
MS.gene052078	MS.gene55270	0.819792	9.64E-53	-1.69E-46
MS.gene052128	MS.gene55270	-0.837913	3.93E-57	-1.69E-46
MS.gene052134	MS.gene55270	0.808869	2.51E-50	-1.69E-46
MS.gene052135	MS.gene55270	0.814939	1.19E-51	-1.69E-46
MS.gene052188	MS.gene55270	0.835504	1.61E-56	-1.69E-46
MS.gene052253	MS.gene55270	0.884562	1.72E-71	-1.69E-46
MS.gene052310	MS.gene55270	0.87321	1.75E-67	-1.69E-46
MS.gene052322	MS.gene55270	0.852977	3.24E-61	-1.69E-46
MS.gene052340	MS.gene55270	0.840222	9.90E-58	-1.69E-46
MS.gene052346	MS.gene55270	0.818318	2.09E-52	-1.69E-46
MS.gene05240	MS.gene55270	-0.811369	7.25E-51	-1.69E-46
MS.gene052414	MS.gene55270	0.836028	1.19E-56	-1.69E-46
MS.gene052421	MS.gene55270	0.889169	3.08E-73	-1.69E-46
MS.gene052481	MS.gene55270	0.875852	2.22E-68	-1.69E-46
MS.gene052484	MS.gene55270	0.811857	5.68E-51	-1.69E-46
MS.gene052485	MS.gene55270	0.859252	4.70E-63	-1.69E-46
MS.gene052501	MS.gene55270	0.868191	7.84E-66	-1.69E-46
MS.gene052505	MS.gene55270	0.88395	2.91E-71	-1.69E-46
MS.gene052615	MS.gene55270	0.839994	1.14E-57	-1.69E-46
MS.gene052767	MS.gene55270	0.80083	1.20E-48	-1.69E-46
MS.gene052982	MS.gene55270	0.870908	1.02E-66	-1.69E-46
MS.gene053103	MS.gene55270	0.816813	4.56E-52	-1.69E-46
MS.gene053207	MS.gene55270	0.803156	3.99E-49	-1.69E-46
MS.gene053209	MS.gene55270	0.821608	3.69E-53	-1.69E-46
MS.gene053213	MS.gene55270	0.82585	3.74E-54	-1.69E-46
MS.gene053286	MS.gene55270	0.807875	4.08E-50	-1.69E-46
MS.gene053322	MS.gene55270	0.816514	5.32E-52	-1.69E-46
MS.gene053406	MS.gene55270	-0.800113	1.68E-48	-1.69E-46
MS.gene053436	MS.gene55270	0.81233	4.48E-51	-1.69E-46
MS.gene053574	MS.gene55270	0.841602	4.30E-58	-1.69E-46
MS.gene053579	MS.gene55270	0.801728	7.85E-49	-1.69E-46
MS.gene053758	MS.gene55270	0.82806	1.11E-54	-1.69E-46
MS.gene053813	MS.gene55270	0.801156	1.03E-48	-1.69E-46
MS.gene053836	MS.gene55270	0.82076	5.78E-53	-1.69E-46
MS.gene053873	MS.gene55270	0.843664	1.22E-58	-1.69E-46
MS.gene053912	MS.gene55270	0.812369	4.39E-51	-1.69E-46
MS.gene054010	MS.gene55270	0.801461	8.91E-49	-1.69E-46
MS.gene054011	MS.gene55270	0.810995	8.74E-51	-1.69E-46
MS.gene054012	MS.gene55270	0.804607	1.99E-49	-1.69E-46
MS.gene054013	MS.gene55270	0.800871	1.18E-48	-1.69E-46
MS.gene054102	MS.gene55270	0.826557	2.54E-54	-1.69E-46
MS.gene05413	MS.gene55270	0.812224	4.72E-51	-1.69E-46
MS.gene054183	MS.gene55270	0.842767	2.11E-58	-1.69E-46
MS.gene054719	MS.gene55270	0.817307	3.53E-52	-1.69E-46
MS.gene054742	MS.gene55270	-0.826055	3.35E-54	-1.69E-46
MS.gene054917	MS.gene55270	0.829218	5.82E-55	-1.69E-46
MS.gene054918	MS.gene55270	0.84979	2.58E-60	-1.69E-46
MS.gene054920	MS.gene55270	0.803943	2.74E-49	-1.69E-46
MS.gene054927	MS.gene55270	0.849019	4.23E-60	-1.69E-46
MS.gene05505	MS.gene55270	0.854852	9.34E-62	-1.69E-46
MS.gene055116	MS.gene55270	0.916497	1.66E-85	-1.69E-46
MS.gene055206	MS.gene55270	0.800088	1.70E-48	-1.69E-46
MS.gene055277	MS.gene55270	0.840227	9.87E-58	-1.69E-46
MS.gene055289	MS.gene55270	0.823971	1.04E-53	-1.69E-46
MS.gene055369	MS.gene55270	0.849232	3.69E-60	-1.69E-46
MS.gene055370	MS.gene55270	0.817987	2.48E-52	-1.69E-46
MS.gene055412	MS.gene55270	0.810102	1.36E-50	-1.69E-46
MS.gene055422	MS.gene55270	0.816055	6.74E-52	-1.69E-46
MS.gene055428	MS.gene55270	0.825061	5.76E-54	-1.69E-46
MS.gene055486	MS.gene55270	0.808761	2.64E-50	-1.69E-46
MS.gene055499	MS.gene55270	0.803247	3.82E-49	-1.69E-46
MS.gene05553	MS.gene55270	0.827453	1.55E-54	-1.69E-46
MS.gene055564	MS.gene55270	0.828543	8.48E-55	-1.69E-46
MS.gene055722	MS.gene55270	0.814623	1.40E-51	-1.69E-46
MS.gene055909	MS.gene55270	0.815758	7.84E-52	-1.69E-46
MS.gene055911	MS.gene55270	0.819653	1.04E-52	-1.69E-46
MS.gene05594	MS.gene55270	0.838659	2.52E-57	-1.69E-46
MS.gene056191	MS.gene55270	0.869503	2.95E-66	-1.69E-46
MS.gene056337	MS.gene55270	0.846308	2.36E-59	-1.69E-46
MS.gene056407	MS.gene55270	0.857448	1.62E-62	-1.69E-46
MS.gene056410	MS.gene55270	0.801341	9.42E-49	-1.69E-46
MS.gene056497	MS.gene55270	0.824616	7.33E-54	-1.69E-46
MS.gene056511	MS.gene55270	0.879192	1.52E-69	-1.69E-46
MS.gene056514	MS.gene55270	0.856137	3.94E-62	-1.69E-46
MS.gene056612	MS.gene55270	0.813067	3.09E-51	-1.69E-46
MS.gene056659	MS.gene55270	0.822017	2.97E-53	-1.69E-46
MS.gene056723	MS.gene55270	0.80398	2.69E-49	-1.69E-46
MS.gene056782	MS.gene55270	0.818586	1.81E-52	-1.69E-46
MS.gene056899	MS.gene55270	-0.828714	7.71E-55	-1.69E-46
MS.gene056920	MS.gene55270	-0.815508	8.92E-52	-1.69E-46
MS.gene057011	MS.gene55270	0.824574	7.50E-54	-1.69E-46
MS.gene05702	MS.gene55270	0.872714	2.57E-67	-1.69E-46
MS.gene057048	MS.gene55270	0.84428	8.34E-59	-1.69E-46
MS.gene057076	MS.gene55270	0.810428	1.16E-50	-1.69E-46
MS.gene057123	MS.gene55270	0.81633	5.85E-52	-1.69E-46
MS.gene057124	MS.gene55270	0.855394	6.50E-62	-1.69E-46
MS.gene057129	MS.gene55270	0.800333	1.51E-48	-1.69E-46
MS.gene057146	MS.gene55270	0.867549	1.26E-65	-1.69E-46
MS.gene057196	MS.gene55270	0.808755	2.65E-50	-1.69E-46
MS.gene057207	MS.gene55270	0.820634	6.18E-53	-1.69E-46
MS.gene057310	MS.gene55270	0.832695	8.16E-56	-1.69E-46
MS.gene057331	MS.gene55270	0.813964	1.96E-51	-1.69E-46
MS.gene057416	MS.gene55270	0.848213	7.07E-60	-1.69E-46
MS.gene057476	MS.gene55270	0.845348	4.30E-59	-1.69E-46
MS.gene057734	MS.gene55270	0.803133	4.03E-49	-1.69E-46
MS.gene057749	MS.gene55270	0.875518	2.89E-68	-1.69E-46
MS.gene057823	MS.gene55270	0.869532	2.89E-66	-1.69E-46
MS.gene057825	MS.gene55270	0.849996	2.26E-60	-1.69E-46
MS.gene057888	MS.gene55270	0.830932	2.22E-55	-1.69E-46
MS.gene058002	MS.gene55270	0.823252	1.53E-53	-1.69E-46
MS.gene058007	MS.gene55270	0.837194	6.00E-57	-1.69E-46
MS.gene058019	MS.gene55270	0.84465	6.63E-59	-1.69E-46
MS.gene05811	MS.gene55270	0.802296	6.00E-49	-1.69E-46
MS.gene058130	MS.gene55270	0.811103	8.27E-51	-1.69E-46
MS.gene058233	MS.gene55270	0.860054	2.70E-63	-1.69E-46
MS.gene058293	MS.gene55270	0.8155	8.95E-52	-1.69E-46
MS.gene058376	MS.gene55270	0.855854	4.77E-62	-1.69E-46
MS.gene058444	MS.gene55270	0.831308	1.80E-55	-1.69E-46
MS.gene058660	MS.gene55270	0.875127	3.94E-68	-1.69E-46
MS.gene058700	MS.gene55270	0.840639	7.70E-58	-1.69E-46
MS.gene058710	MS.gene55270	0.801382	9.25E-49	-1.69E-46
MS.gene05883	MS.gene55270	0.843391	1.44E-58	-1.69E-46
MS.gene05886	MS.gene55270	0.85624	3.68E-62	-1.69E-46
MS.gene058928	MS.gene55270	0.845059	5.14E-59	-1.69E-46
MS.gene058995	MS.gene55270	0.848441	6.12E-60	-1.69E-46
MS.gene059011	MS.gene55270	0.838354	3.02E-57	-1.69E-46
MS.gene059043	MS.gene55270	-0.80527	1.45E-49	-1.69E-46
MS.gene05907	MS.gene55270	0.846687	1.86E-59	-1.69E-46
MS.gene059082	MS.gene55270	0.828439	8.99E-55	-1.69E-46
MS.gene059141	MS.gene55270	0.868926	4.54E-66	-1.69E-46
MS.gene059294	MS.gene55270	0.81533	9.77E-52	-1.69E-46
MS.gene05934	MS.gene55270	0.805831	1.10E-49	-1.69E-46
MS.gene059420	MS.gene55270	0.882329	1.14E-70	-1.69E-46
MS.gene059455	MS.gene55270	0.806086	9.76E-50	-1.69E-46
MS.gene059462	MS.gene55270	0.8279	1.21E-54	-1.69E-46
MS.gene059536	MS.gene55270	0.851404	9.07E-61	-1.69E-46
MS.gene059597	MS.gene55270	0.82228	2.58E-53	-1.69E-46
MS.gene059676	MS.gene55270	0.819948	8.88E-53	-1.69E-46
MS.gene059688	MS.gene55270	0.892466	1.55E-74	-1.69E-46
MS.gene059692	MS.gene55270	0.873202	1.77E-67	-1.69E-46
MS.gene059695	MS.gene55270	0.873844	1.07E-67	-1.69E-46
MS.gene059807	MS.gene55270	0.804371	2.23E-49	-1.69E-46
MS.gene05984	MS.gene55270	0.812793	3.55E-51	-1.69E-46
MS.gene059876	MS.gene55270	0.811937	5.45E-51	-1.69E-46
MS.gene059902	MS.gene55270	0.801565	8.48E-49	-1.69E-46
MS.gene059955	MS.gene55270	-0.801309	9.57E-49	-1.69E-46
MS.gene059960	MS.gene55270	0.806888	6.61E-50	-1.69E-46
MS.gene06037	MS.gene55270	0.813702	2.24E-51	-1.69E-46
MS.gene060403	MS.gene55270	0.899127	2.70E-77	-1.69E-46
MS.gene060804	MS.gene55270	0.851499	8.53E-61	-1.69E-46
MS.gene060835	MS.gene55270	0.836167	1.10E-56	-1.69E-46
MS.gene060837	MS.gene55270	0.828223	1.01E-54	-1.69E-46
MS.gene06092	MS.gene55270	0.810461	1.14E-50	-1.69E-46
MS.gene061041	MS.gene55270	0.818805	1.62E-52	-1.69E-46
MS.gene061049	MS.gene55270	0.865934	4.12E-65	-1.69E-46
MS.gene061051	MS.gene55270	-0.805981	1.03E-49	-1.69E-46
MS.gene061154	MS.gene55270	0.843813	1.11E-58	-1.69E-46
MS.gene061159	MS.gene55270	0.804191	2.43E-49	-1.69E-46
MS.gene061200	MS.gene55270	0.80845	3.08E-50	-1.69E-46

PPI:

Gene1	Gene2	Type

Query id	Subject id	identity %	alignment length	mismatches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
MS.gene55270.t1	MTR_5g041910	96.471	85	3	0	1	85	177	261	2.40e-54	169

Query id	Subject id	identity %	alignment length	mismatches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
MS.gene55270.t1	AT1G14150	71.765	85	24	0	1	85	106	190	1.16e-39	129
MS.gene55270.t1	AT1G14150	64.815	54	19	0	1	54	106	159	1.37e-20	80.5

Find 11 sgRNAs with CRISPR-Local

Find 50 sgRNAs with CRISPR-GE

CRISPR-Local

CRISPR-Local
sgRNA_sequence	on_target_score	Position	Region
GAAACAGAATTATCTTGAAC+AGG	0.378711	5.2:-31419895	MS.gene55270:CDS
TGTTGGAAACTTTGTCTTGG+AGG	0.429693	5.2:-31419941	MS.gene55270:CDS
TCAATGTCTTCTCGTAGTAT+AGG	0.434954	5.2:+31418745	None:intergenic
AGGTATGATTCATATACCTT+TGG	0.468647	5.2:+31418765	None:intergenic
AAATGTTGGAAACTTTGTCT+TGG	0.489316	5.2:-31419944	MS.gene55270:CDS
TCGTTATGTGCGGACACCAA+AGG	0.589271	5.2:-31418781	MS.gene55270:CDS
GAAATCAATAGATGAACTTG+TGG	0.590899	5.2:-31418724	MS.gene55270:CDS
TGTTAAAACTGCTAATGAGT+TGG	0.596114	5.2:-31419823	MS.gene55270:CDS
TTTGCCTGAAAATCGTCGCA+AGG	0.639622	5.2:-31419850	MS.gene55270:CDS
GTTGGTTGATAATTTGACTG+AGG	0.655182	5.2:-31419805	MS.gene55270:intron
TCCAGATGGATCGTTATGTG+CGG	0.669027	5.2:-31418791	MS.gene55270:intron

CRISPR-GE

badsite warning	sgRNA_sequence	Strand	Position	Region	GC_content
!!	TAATAAGATAATTTAGTCAT+TGG	-	chr5.2:31419157-31419176	MS.gene55270:intron	15.0%
!!	TACAAGTTAATTATTAATAG+TGG	-	chr5.2:31419809-31419828	MS.gene55270:CDS	15.0%
!!	TGAAATTGTTAATGAATATA+AGG	-	chr5.2:31419678-31419697	MS.gene55270:intron	15.0%
!!!	TCTATTAGTTGAATTTTTTA+AGG	+	chr5.2:31419308-31419327	None:intergenic	15.0%
!!!	TGATTTTCTCAAATTATTAA+TGG	+	chr5.2:31419532-31419551	None:intergenic	15.0%
!!!	TGTATTTTTAGTATATGTTT+AGG	-	chr5.2:31419734-31419753	MS.gene55270:intron	15.0%
!!!	TTATTACTATAATTCTGAAA+AGG	+	chr5.2:31419143-31419162	None:intergenic	15.0%
!!!	AATTTATATACCTGTTTTTG+AGG	+	chr5.2:31419403-31419422	None:intergenic	20.0%
!!!	TCAATTTCATGGATTAATTT+GGG	-	chr5.2:31419337-31419356	MS.gene55270:intron	20.0%
!	AAAAATTGTCTGTTCTACAT+AGG	-	chr5.2:31419634-31419653	MS.gene55270:intron	25.0%
!	AAAAGGAGAATGTTAAATAG+TGG	+	chr5.2:31419126-31419145	None:intergenic	25.0%
!	GATTCAAATTGTCAATTTCA+TGG	-	chr5.2:31419326-31419345	MS.gene55270:intron	25.0%
!	TGTGTTAAATTAGTTAAGCT+GGG	-	chr5.2:31419279-31419298	MS.gene55270:intron	25.0%
!	TTCAGTGTAATTATATGTGT+CGG	-	chr5.2:31419557-31419576	MS.gene55270:intron	25.0%
!	TTGTGTTAAATTAGTTAAGC+TGG	-	chr5.2:31419278-31419297	MS.gene55270:intron	25.0%
!!	GTCAATTTCATGGATTAATT+TGG	-	chr5.2:31419336-31419355	MS.gene55270:intron	25.0%
!!	TATGTAGAACAGACAATTTT+TGG	+	chr5.2:31419635-31419654	None:intergenic	25.0%
!!!	AGTCTATGAACATGTTTTTT+CGG	-	chr5.2:31418944-31418963	MS.gene55270:intron	25.0%
!!!	TAGTTTTAATCTATGAAGCA+TGG	-	chr5.2:31419473-31419492	MS.gene55270:intron	25.0%
	AATATAAGGTGCAATACAAG+AGG	-	chr5.2:31419692-31419711	MS.gene55270:intron	30.0%
	AATTAGCTATCCTCAAAAAC+AGG	-	chr5.2:31419390-31419409	MS.gene55270:intron	30.0%
	AGGTATGATTCATATACCTT+TGG	+	chr5.2:31419890-31419909	None:intergenic	30.0%
	GAAACAGAATTATCTTGAAC+AGG	-	chr5.2:31418757-31418776	MS.gene55270:CDS	30.0%
	GAAATCAATAGATGAACTTG+TGG	-	chr5.2:31419928-31419947	MS.gene55270:CDS	30.0%
	TGACAAAATAGAGTTCAGAT+TGG	+	chr5.2:31419442-31419461	None:intergenic	30.0%
	TGTTAAAACTGCTAATGAGT+TGG	-	chr5.2:31418829-31418848	MS.gene55270:intron	30.0%
!	AGTATATGTTTAGGTTCGAT+TGG	-	chr5.2:31419743-31419762	MS.gene55270:intron	30.0%
!!	GAACAGACAATTTTTGGATT+AGG	+	chr5.2:31419629-31419648	None:intergenic	30.0%
!!	TATGCTTAATTTGTTGCTTG+TGG	-	chr5.2:31418874-31418893	MS.gene55270:intron	30.0%
!!!	TATGAACATGTTTTTTCGGA+GGG	-	chr5.2:31418948-31418967	MS.gene55270:intron	30.0%
	TAAATAGTGGTCTCAGACAT+TGG	+	chr5.2:31419113-31419132	None:intergenic	35.0%
	TCAATGTCTTCTCGTAGTAT+AGG	+	chr5.2:31419910-31419929	None:intergenic	35.0%
!!	GTTGGTTGATAATTTGACTG+AGG	-	chr5.2:31418847-31418866	MS.gene55270:intron	35.0%
!!!	CTATGAACATGTTTTTTCGG+AGG	-	chr5.2:31418947-31418966	MS.gene55270:intron	35.0%
	TGTTGGAAACTTTGTCTTGG+AGG	-	chr5.2:31418711-31418730	MS.gene55270:CDS	40.0%
	TTCGTCCAAATTAGCTCATC+TGG	-	chr5.2:31419222-31419241	MS.gene55270:intron	40.0%
	TTGAGCCAGATGAGCTAATT+TGG	+	chr5.2:31419230-31419249	None:intergenic	40.0%
!	ATATTTTTCCCCTCTCCAGA+TGG	-	chr5.2:31419847-31419866	MS.gene55270:CDS	40.0%
	AACCAGTGTCATCACTGCAA+TGG	-	chr5.2:31418978-31418997	MS.gene55270:intron	45.0%
	AACCATTGCAGTGATGACAC+TGG	+	chr5.2:31418983-31419002	None:intergenic	45.0%
	ACATAACGATCCATCTGGAG+AGG	+	chr5.2:31419860-31419879	None:intergenic	45.0%
	ATAACGATCCATCTGGAGAG+GGG	+	chr5.2:31419858-31419877	None:intergenic	45.0%
	CATAACGATCCATCTGGAGA+GGG	+	chr5.2:31419859-31419878	None:intergenic	45.0%
	TCCAGATGGATCGTTATGTG+CGG	-	chr5.2:31419861-31419880	MS.gene55270:CDS	45.0%
	TTTGCCTGAAAATCGTCGCA+AGG	-	chr5.2:31418802-31418821	MS.gene55270:intron	45.0%
!	TACTCCTTGCGACGATTTTC+AGG	+	chr5.2:31418809-31418828	None:intergenic	45.0%
	ACACGACATGTGTCCGACAT+CGG	-	chr5.2:31419597-31419616	MS.gene55270:intron	50.0%
	GATTAGGCGTGTTCCGATGT+CGG	+	chr5.2:31419613-31419632	None:intergenic	50.0%
	TCCGCACATAACGATCCATC+TGG	+	chr5.2:31419865-31419884	None:intergenic	50.0%
	TCGTTATGTGCGGACACCAA+AGG	-	chr5.2:31419871-31419890	MS.gene55270:CDS	50.0%

Chromosome	Type	Strat	End	Strand	Name
chr5.2	gene	31418710	31419964	31418710	ID=MS.gene55270
chr5.2	mRNA	31418710	31419964	31418710	ID=MS.gene55270.t1;Parent=MS.gene55270
chr5.2	exon	31419806	31419964	31419806	ID=MS.gene55270.t1.exon1;Parent=MS.gene55270.t1
chr5.2	CDS	31419806	31419964	31419806	ID=cds.MS.gene55270.t1;Parent=MS.gene55270.t1
chr5.2	exon	31418710	31418808	31418710	ID=MS.gene55270.t1.exon2;Parent=MS.gene55270.t1
chr5.2	CDS	31418710	31418808	31418710	ID=cds.MS.gene55270.t1;Parent=MS.gene55270.t1

Gene Sequence

>MS.gene55270

ATGTTGGAAACTTTGTCTTGGAGGTATGTTATGTTTTATATAAGATTGAAACAGAATTATCTTGAACAGGATTTGAAAAATGCTATCGCTACTTTGCCTGAAAATCGTCGCAAGGAGTATGTTAAAACTGCTAATGAGTTGGTTGATAATTTGACTGAGGTATGTATGCTTAATTTGTTGCTTGTGGATTAAATTTTAGTGCTTGTTTTGTTATTTTGATTAATGAATTGAATTAGTCTATGAACATGTTTTTTCGGAGGGTATTGCTAACCAGTGTCATCACTGCAATGGTTAAGAAATCTATAAATAGAAAATTTATCTTGAAAACATAAGTTTTGACTTTTGATTAAGTAATAATTACACTATTTTTGATAAAAAGTTACTTGTTTTAGTTGCTTAACCAATGTCTGAGACCACTATTTAACATTCTCCTTTTCAGAATTATAGTAATAAGATAATTTAGTCATTGGAATTAATGAAATTCGAAAATATTTTGAAAATTAAAATTTTATTTCGTCCAAATTAGCTCATCTGGCTCAAGTTGTCAAGTTTATGATTTATTTTGAATTTGTGTTAAATTAGTTAAGCTGGGTTACCTTAAAAAATTCAACTAATAGATTCAAATTGTCAATTTCATGGATTAATTTGGGTGATGAAATATGAGTTTGACATGTTGTGTTAATTAGCTATCCTCAAAAACAGGTATATAAATTAGTTTTACACTATCATCCAATCTGAACTCTATTTTGTCATGTGATATCATTAGTTTTAATCTATGAAGCATGGATACAGACACAACACAGATATGACACGCATATACCATTAATAATTTGAGAAAATCATATAATTCAGTGTAATTATATGTGTCGGTGTTGTATCGATGTTGAACACGACATGTGTCCGACATCGGAACACGCCTAATCCAAAAATTGTCTGTTCTACATAGGTTTTAATTATATAATTATAGATGAAATTGTTAATGAATATAAGGTGCAATACAAGAGGTATTGTAGTGATCATTATCTGTATTTTTAGTATATGTTTAGGTTCGATTGGCAAAATAAGAGAACTTAACATCTAATTATAGCTTAACGTACAATACAAGTTAATTATTAATAGTGGTCTTATAATGTGATTATATTTTTCCCCTCTCCAGATGGATCGTTATGTGCGGACACCAAAGGTATATGAATCATACCTATACTACGAGAAGACATTGAAATCAATAGATGAACTTGTGGCTCTGTTAGCATAG

Protein sequence

>MS.gene55270.t1

MLETLSWRYVMFYIRLKQNYLEQDLKNAIATLPENRRKEYVKTANELVDNLTEMDRYVRTPKVYESYLYYEKTLKSIDELVALLA