Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene94785.t1 | XP_013449051.1 | 99.3 | 411 | 3 | 0 | 1 | 411 | 1 | 411 | 1.10E-230 | 808.9 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene94785.t1 | P46275 | 93.1 | 408 | 27 | 1 | 4 | 411 | 1 | 407 | 1.1e-218 | 760.4 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene94785.t1 | A0A072U1Q8 | 99.3 | 411 | 3 | 0 | 1 | 411 | 1 | 411 | 7.8e-231 | 808.9 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| MS.gene049137 | MS.gene94785 | 0.825474 | 4.60E-54 | -1.69E-46 |
| MS.gene049222 | MS.gene94785 | 0.825371 | 4.86E-54 | -1.69E-46 |
| MS.gene049285 | MS.gene94785 | 0.823427 | 1.39E-53 | -1.69E-46 |
| MS.gene049320 | MS.gene94785 | 0.831325 | 1.78E-55 | -1.69E-46 |
| MS.gene049356 | MS.gene94785 | 0.828143 | 1.06E-54 | -1.69E-46 |
| MS.gene049369 | MS.gene94785 | 0.839007 | 2.05E-57 | -1.69E-46 |
| MS.gene049396 | MS.gene94785 | 0.813517 | 2.46E-51 | -1.69E-46 |
| MS.gene049427 | MS.gene94785 | 0.856041 | 4.20E-62 | -1.69E-46 |
| MS.gene049609 | MS.gene94785 | 0.875764 | 2.38E-68 | -1.69E-46 |
| MS.gene049661 | MS.gene94785 | 0.841292 | 5.19E-58 | -1.69E-46 |
| MS.gene049662 | MS.gene94785 | 0.845553 | 3.78E-59 | -1.69E-46 |
| MS.gene049805 | MS.gene94785 | 0.846438 | 2.17E-59 | -1.69E-46 |
| MS.gene050397 | MS.gene94785 | 0.820975 | 5.16E-53 | -1.69E-46 |
| MS.gene050432 | MS.gene94785 | 0.868771 | 5.10E-66 | -1.69E-46 |
| MS.gene050518 | MS.gene94785 | 0.802114 | 6.54E-49 | -1.69E-46 |
| MS.gene050520 | MS.gene94785 | 0.82454 | 7.64E-54 | -1.69E-46 |
| MS.gene050538 | MS.gene94785 | 0.841535 | 4.48E-58 | -1.69E-46 |
| MS.gene050593 | MS.gene94785 | 0.852007 | 6.12E-61 | -1.69E-46 |
| MS.gene050612 | MS.gene94785 | 0.80408 | 2.56E-49 | -1.69E-46 |
| MS.gene050670 | MS.gene94785 | 0.854633 | 1.08E-61 | -1.69E-46 |
| MS.gene050686 | MS.gene94785 | 0.803743 | 3.01E-49 | -1.69E-46 |
| MS.gene050699 | MS.gene94785 | 0.809165 | 2.16E-50 | -1.69E-46 |
| MS.gene050747 | MS.gene94785 | 0.852483 | 4.48E-61 | -1.69E-46 |
| MS.gene050767 | MS.gene94785 | 0.837649 | 4.59E-57 | -1.69E-46 |
| MS.gene050770 | MS.gene94785 | 0.841316 | 5.12E-58 | -1.69E-46 |
| MS.gene050772 | MS.gene94785 | 0.895925 | 6.03E-76 | -1.69E-46 |
| MS.gene05080 | MS.gene94785 | 0.818753 | 1.66E-52 | -1.69E-46 |
| MS.gene050950 | MS.gene94785 | 0.859641 | 3.59E-63 | -1.69E-46 |
| MS.gene05105 | MS.gene94785 | 0.909642 | 4.55E-82 | -1.69E-46 |
| MS.gene051228 | MS.gene94785 | 0.819265 | 1.27E-52 | -1.69E-46 |
| MS.gene051387 | MS.gene94785 | 0.850285 | 1.87E-60 | -1.69E-46 |
| MS.gene051605 | MS.gene94785 | 0.800781 | 1.23E-48 | -1.69E-46 |
| MS.gene051666 | MS.gene94785 | 0.859079 | 5.30E-63 | -1.69E-46 |
| MS.gene051810 | MS.gene94785 | 0.831297 | 1.81E-55 | -1.69E-46 |
| MS.gene051858 | MS.gene94785 | 0.823558 | 1.30E-53 | -1.69E-46 |
| MS.gene052188 | MS.gene94785 | 0.823939 | 1.06E-53 | -1.69E-46 |
| MS.gene052253 | MS.gene94785 | 0.812719 | 3.68E-51 | -1.69E-46 |
| MS.gene052271 | MS.gene94785 | 0.830247 | 3.27E-55 | -1.69E-46 |
| MS.gene052290 | MS.gene94785 | 0.802438 | 5.61E-49 | -1.69E-46 |
| MS.gene052310 | MS.gene94785 | 0.84414 | 9.09E-59 | -1.69E-46 |
| MS.gene052322 | MS.gene94785 | 0.841992 | 3.39E-58 | -1.69E-46 |
| MS.gene052340 | MS.gene94785 | 0.821803 | 3.33E-53 | -1.69E-46 |
| MS.gene052346 | MS.gene94785 | 0.810428 | 1.16E-50 | -1.69E-46 |
| MS.gene052379 | MS.gene94785 | 0.814699 | 1.35E-51 | -1.69E-46 |
| MS.gene052421 | MS.gene94785 | 0.857878 | 1.21E-62 | -1.69E-46 |
| MS.gene052481 | MS.gene94785 | 0.837514 | 4.97E-57 | -1.69E-46 |
| MS.gene052484 | MS.gene94785 | 0.839274 | 1.75E-57 | -1.69E-46 |
| MS.gene052485 | MS.gene94785 | 0.832659 | 8.33E-56 | -1.69E-46 |
| MS.gene052510 | MS.gene94785 | 0.80443 | 2.17E-49 | -1.69E-46 |
| MS.gene052615 | MS.gene94785 | 0.859894 | 3.02E-63 | -1.69E-46 |
| MS.gene052870 | MS.gene94785 | 0.820046 | 8.44E-53 | -1.69E-46 |
| MS.gene052872 | MS.gene94785 | 0.811758 | 5.97E-51 | -1.69E-46 |
| MS.gene052916 | MS.gene94785 | 0.801505 | 8.72E-49 | -1.69E-46 |
| MS.gene052982 | MS.gene94785 | 0.825285 | 5.09E-54 | -1.69E-46 |
| MS.gene053009 | MS.gene94785 | 0.85804 | 1.08E-62 | -1.69E-46 |
| MS.gene053103 | MS.gene94785 | 0.837754 | 4.31E-57 | -1.69E-46 |
| MS.gene053104 | MS.gene94785 | 0.858205 | 9.67E-63 | -1.69E-46 |
| MS.gene053107 | MS.gene94785 | 0.838395 | 2.95E-57 | -1.69E-46 |
| MS.gene053207 | MS.gene94785 | 0.850385 | 1.76E-60 | -1.69E-46 |
| MS.gene053209 | MS.gene94785 | 0.863057 | 3.27E-64 | -1.69E-46 |
| MS.gene053213 | MS.gene94785 | 0.868404 | 6.70E-66 | -1.69E-46 |
| MS.gene053286 | MS.gene94785 | 0.856779 | 2.55E-62 | -1.69E-46 |
| MS.gene053322 | MS.gene94785 | 0.847152 | 1.39E-59 | -1.69E-46 |
| MS.gene053436 | MS.gene94785 | 0.822064 | 2.89E-53 | -1.69E-46 |
| MS.gene053449 | MS.gene94785 | 0.82307 | 1.69E-53 | -1.69E-46 |
| MS.gene053574 | MS.gene94785 | 0.874893 | 4.73E-68 | -1.69E-46 |
| MS.gene053632 | MS.gene94785 | 0.818198 | 2.22E-52 | -1.69E-46 |
| MS.gene053758 | MS.gene94785 | 0.818364 | 2.04E-52 | -1.69E-46 |
| MS.gene053813 | MS.gene94785 | 0.818403 | 2.00E-52 | -1.69E-46 |
| MS.gene053912 | MS.gene94785 | 0.806336 | 8.64E-50 | -1.69E-46 |
| MS.gene053916 | MS.gene94785 | 0.848256 | 6.88E-60 | -1.69E-46 |
| MS.gene054376 | MS.gene94785 | 0.829485 | 5.01E-55 | -1.69E-46 |
| MS.gene054408 | MS.gene94785 | 0.840432 | 8.72E-58 | -1.69E-46 |
| MS.gene054600 | MS.gene94785 | 0.833292 | 5.80E-56 | -1.69E-46 |
| MS.gene054642 | MS.gene94785 | 0.857967 | 1.14E-62 | -1.69E-46 |
| MS.gene054927 | MS.gene94785 | 0.804049 | 2.60E-49 | -1.69E-46 |
| MS.gene05494 | MS.gene94785 | 0.81939 | 1.19E-52 | -1.69E-46 |
| MS.gene05505 | MS.gene94785 | 0.880761 | 4.21E-70 | -1.69E-46 |
| MS.gene055116 | MS.gene94785 | 0.882506 | 9.84E-71 | -1.69E-46 |
| MS.gene055206 | MS.gene94785 | 0.833505 | 5.13E-56 | -1.69E-46 |
| MS.gene055224 | MS.gene94785 | 0.827492 | 1.52E-54 | -1.69E-46 |
| MS.gene055277 | MS.gene94785 | 0.834928 | 2.26E-56 | -1.69E-46 |
| MS.gene055289 | MS.gene94785 | 0.853807 | 1.87E-61 | -1.69E-46 |
| MS.gene055362 | MS.gene94785 | 0.815731 | 7.96E-52 | -1.69E-46 |
| MS.gene055397 | MS.gene94785 | 0.83373 | 4.51E-56 | -1.69E-46 |
| MS.gene055412 | MS.gene94785 | 0.823743 | 1.17E-53 | -1.69E-46 |
| MS.gene055499 | MS.gene94785 | 0.82404 | 1.00E-53 | -1.69E-46 |
| MS.gene055647 | MS.gene94785 | 0.813574 | 2.39E-51 | -1.69E-46 |
| MS.gene055722 | MS.gene94785 | 0.864981 | 8.22E-65 | -1.69E-46 |
| MS.gene055909 | MS.gene94785 | 0.808508 | 2.99E-50 | -1.69E-46 |
| MS.gene055911 | MS.gene94785 | 0.804002 | 2.66E-49 | -1.69E-46 |
| MS.gene05592 | MS.gene94785 | 0.885737 | 6.28E-72 | -1.69E-46 |
| MS.gene056083 | MS.gene94785 | 0.808702 | 2.72E-50 | -1.69E-46 |
| MS.gene056191 | MS.gene94785 | 0.807691 | 4.47E-50 | -1.69E-46 |
| MS.gene056374 | MS.gene94785 | 0.834767 | 2.48E-56 | -1.69E-46 |
| MS.gene056407 | MS.gene94785 | 0.834166 | 3.51E-56 | -1.69E-46 |
| MS.gene056410 | MS.gene94785 | 0.805198 | 1.50E-49 | -1.69E-46 |
| MS.gene056422 | MS.gene94785 | 0.832066 | 1.17E-55 | -1.69E-46 |
| MS.gene056448 | MS.gene94785 | 0.815308 | 9.88E-52 | -1.69E-46 |
| MS.gene056511 | MS.gene94785 | 0.869001 | 4.29E-66 | -1.69E-46 |
| MS.gene056609 | MS.gene94785 | 0.815365 | 9.60E-52 | -1.69E-46 |
| MS.gene05664 | MS.gene94785 | 0.828513 | 8.62E-55 | -1.69E-46 |
| MS.gene056657 | MS.gene94785 | 0.832137 | 1.12E-55 | -1.69E-46 |
| MS.gene056659 | MS.gene94785 | 0.81968 | 1.02E-52 | -1.69E-46 |
| MS.gene05666 | MS.gene94785 | 0.824251 | 8.93E-54 | -1.69E-46 |
| MS.gene056796 | MS.gene94785 | 0.800899 | 1.16E-48 | -1.69E-46 |
| MS.gene056897 | MS.gene94785 | 0.83401 | 3.84E-56 | -1.69E-46 |
| MS.gene056947 | MS.gene94785 | 0.807866 | 4.10E-50 | -1.69E-46 |
| MS.gene057011 | MS.gene94785 | 0.839004 | 2.05E-57 | -1.69E-46 |
| MS.gene05702 | MS.gene94785 | 0.81776 | 2.79E-52 | -1.69E-46 |
| MS.gene057076 | MS.gene94785 | 0.857936 | 1.16E-62 | -1.69E-46 |
| MS.gene057124 | MS.gene94785 | 0.861106 | 1.29E-63 | -1.69E-46 |
| MS.gene057129 | MS.gene94785 | 0.859069 | 5.34E-63 | -1.69E-46 |
| MS.gene057146 | MS.gene94785 | 0.817773 | 2.77E-52 | -1.69E-46 |
| MS.gene057207 | MS.gene94785 | 0.809282 | 2.04E-50 | -1.69E-46 |
| MS.gene057331 | MS.gene94785 | 0.894154 | 3.22E-75 | -1.69E-46 |
| MS.gene05735 | MS.gene94785 | 0.838406 | 2.93E-57 | -1.69E-46 |
| MS.gene057416 | MS.gene94785 | 0.872418 | 3.23E-67 | -1.69E-46 |
| MS.gene057734 | MS.gene94785 | 0.833835 | 4.25E-56 | -1.69E-46 |
| MS.gene058006 | MS.gene94785 | 0.830218 | 3.32E-55 | -1.69E-46 |
| MS.gene058019 | MS.gene94785 | 0.822821 | 1.93E-53 | -1.69E-46 |
| MS.gene058082 | MS.gene94785 | 0.804645 | 1.96E-49 | -1.69E-46 |
| MS.gene058130 | MS.gene94785 | 0.890133 | 1.30E-73 | -1.69E-46 |
| MS.gene058293 | MS.gene94785 | 0.832283 | 1.03E-55 | -1.69E-46 |
| MS.gene058323 | MS.gene94785 | 0.837805 | 4.18E-57 | -1.69E-46 |
| MS.gene058365 | MS.gene94785 | 0.802217 | 6.23E-49 | -1.69E-46 |
| MS.gene05837 | MS.gene94785 | 0.816071 | 6.68E-52 | -1.69E-46 |
| MS.gene058419 | MS.gene94785 | 0.836011 | 1.20E-56 | -1.69E-46 |
| MS.gene058544 | MS.gene94785 | 0.816896 | 4.37E-52 | -1.69E-46 |
| MS.gene058660 | MS.gene94785 | 0.830082 | 3.59E-55 | -1.69E-46 |
| MS.gene058700 | MS.gene94785 | 0.801259 | 9.80E-49 | -1.69E-46 |
| MS.gene058723 | MS.gene94785 | 0.856918 | 2.32E-62 | -1.69E-46 |
| MS.gene058773 | MS.gene94785 | 0.822223 | 2.66E-53 | -1.69E-46 |
| MS.gene058838 | MS.gene94785 | 0.80304 | 4.21E-49 | -1.69E-46 |
| MS.gene05883 | MS.gene94785 | 0.810378 | 1.19E-50 | -1.69E-46 |
| MS.gene058928 | MS.gene94785 | 0.815987 | 6.97E-52 | -1.69E-46 |
| MS.gene058948 | MS.gene94785 | 0.822204 | 2.68E-53 | -1.69E-46 |
| MS.gene059023 | MS.gene94785 | 0.81619 | 6.28E-52 | -1.69E-46 |
| MS.gene059029 | MS.gene94785 | 0.814062 | 1.86E-51 | -1.69E-46 |
| MS.gene05934 | MS.gene94785 | 0.818993 | 1.47E-52 | -1.69E-46 |
| MS.gene059366 | MS.gene94785 | 0.811898 | 5.56E-51 | -1.69E-46 |
| MS.gene059536 | MS.gene94785 | 0.839872 | 1.22E-57 | -1.69E-46 |
| MS.gene059676 | MS.gene94785 | 0.810176 | 1.31E-50 | -1.69E-46 |
| MS.gene059677 | MS.gene94785 | 0.811258 | 7.66E-51 | -1.69E-46 |
| MS.gene059688 | MS.gene94785 | 0.88469 | 1.55E-71 | -1.69E-46 |
| MS.gene059692 | MS.gene94785 | 0.872558 | 2.90E-67 | -1.69E-46 |
| MS.gene059695 | MS.gene94785 | 0.874673 | 5.62E-68 | -1.69E-46 |
| MS.gene059711 | MS.gene94785 | 0.847333 | 1.24E-59 | -1.69E-46 |
| MS.gene059718 | MS.gene94785 | 0.83695 | 6.93E-57 | -1.69E-46 |
| MS.gene059807 | MS.gene94785 | 0.80966 | 1.70E-50 | -1.69E-46 |
| MS.gene059902 | MS.gene94785 | 0.821958 | 3.06E-53 | -1.69E-46 |
| MS.gene059960 | MS.gene94785 | 0.853366 | 2.51E-61 | -1.69E-46 |
| MS.gene059974 | MS.gene94785 | 0.803414 | 3.53E-49 | -1.69E-46 |
| MS.gene060403 | MS.gene94785 | 0.843494 | 1.35E-58 | -1.69E-46 |
| MS.gene060804 | MS.gene94785 | 0.881268 | 2.76E-70 | -1.69E-46 |
| MS.gene060818 | MS.gene94785 | 0.840283 | 9.54E-58 | -1.69E-46 |
| MS.gene060835 | MS.gene94785 | 0.843051 | 1.78E-58 | -1.69E-46 |
| MS.gene060837 | MS.gene94785 | 0.865082 | 7.64E-65 | -1.69E-46 |
| MS.gene06092 | MS.gene94785 | 0.857599 | 1.46E-62 | -1.69E-46 |
| MS.gene061041 | MS.gene94785 | 0.844365 | 7.91E-59 | -1.69E-46 |
| MS.gene061051 | MS.gene94785 | -0.832633 | 8.46E-56 | -1.69E-46 |
| MS.gene061150 | MS.gene94785 | 0.817138 | 3.85E-52 | -1.69E-46 |
| MS.gene061154 | MS.gene94785 | 0.843937 | 1.03E-58 | -1.69E-46 |
| MS.gene061200 | MS.gene94785 | 0.852412 | 4.69E-61 | -1.69E-46 |
PPI:
| Gene1 | Gene2 | Type |
|---|---|---|
| MS.gene94785 | MS.gene028481 | PPI |
| MS.gene94785 | MS.gene053579 | PPI |
| MS.gene94785 | MS.gene90221 | PPI |
| MS.gene94785 | MS.gene068024 | PPI |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene94785.t1 | MTR_7g066120 | 99.270 | 411 | 3 | 0 | 1 | 411 | 1 | 411 | 0.0 | 837 |
| MS.gene94785.t1 | MTR_2g008030 | 50.877 | 342 | 150 | 2 | 71 | 411 | 11 | 335 | 1.39e-116 | 343 |
| MS.gene94785.t1 | MTR_6g035305 | 50.000 | 342 | 153 | 2 | 71 | 411 | 11 | 335 | 4.00e-114 | 337 |
| MS.gene94785.t1 | MTR_4g093620 | 44.970 | 338 | 163 | 7 | 73 | 409 | 70 | 385 | 2.06e-93 | 286 |
| MS.gene94785.t1 | MTR_0776s0010 | 35.493 | 355 | 207 | 6 | 56 | 404 | 273 | 611 | 1.89e-71 | 244 |
| MS.gene94785.t1 | MTR_3g070100 | 28.720 | 289 | 171 | 9 | 125 | 410 | 115 | 371 | 9.49e-20 | 90.5 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene94785.t1 | AT3G54050 | 82.532 | 395 | 61 | 3 | 21 | 411 | 27 | 417 | 0.0 | 659 |
| MS.gene94785.t1 | AT3G54050 | 82.532 | 395 | 61 | 3 | 21 | 411 | 27 | 417 | 0.0 | 659 |
| MS.gene94785.t1 | AT1G43670 | 49.415 | 342 | 155 | 3 | 71 | 411 | 11 | 335 | 1.33e-112 | 333 |
| MS.gene94785.t1 | AT5G64380 | 47.059 | 323 | 147 | 7 | 91 | 409 | 89 | 391 | 6.42e-90 | 278 |
| MS.gene94785.t1 | AT3G55800 | 29.341 | 334 | 179 | 15 | 89 | 410 | 90 | 378 | 1.91e-21 | 95.9 |
Find 89 sgRNAs with CRISPR-Local
Find 203 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| CTGCTATATGGTGGCATTTA+TGG | 0.101447 | 7.1:-36294752 | MS.gene94785:CDS |
| CCGATATACCTTGCTGAATA+AGG | 0.232066 | 7.1:+36294803 | None:intergenic |
| ATGTAAACAGATTGCTTCTT+TGG | 0.237903 | 7.1:-36296583 | MS.gene94785:CDS |
| GCTAATATTTCTAACCTTAC+TGG | 0.275094 | 7.1:-36296552 | MS.gene94785:CDS |
| CATAAACGTGAGGGAGAATA+TGG | 0.335033 | 7.1:+36296837 | None:intergenic |
| GTTGTATTTGATCCACTTGA+TGG | 0.344875 | 7.1:-36295848 | MS.gene94785:CDS |
| AGCTTATAACATTGACTAGT+TGG | 0.352602 | 7.1:-36296677 | MS.gene94785:CDS |
| GCTGCTAGAAGGTTGCTTCC+TGG | 0.357718 | 7.1:+36295055 | None:intergenic |
| AATCTCCAAATACCAAAATC+AGG | 0.361294 | 7.1:-36294923 | MS.gene94785:CDS |
| GTAATCTTCGTTCTAACAAT+TGG | 0.361561 | 7.1:-36295007 | MS.gene94785:CDS |
| TCTAACCTTACTGGTGTTCA+AGG | 0.382052 | 7.1:-36296543 | MS.gene94785:CDS |
| GCGGTGGAAGAGAGTTATTC+AGG | 0.384201 | 7.1:-36295881 | MS.gene94785:CDS |
| CTCAAGGAACCAGGTTCTAA+TGG | 0.388835 | 7.1:-36294830 | MS.gene94785:CDS |
| AGAAAGCATGTGAGTGGCTC+TGG | 0.395778 | 7.1:-36296762 | MS.gene94785:CDS |
| TTCCATAGGACACTGCTATA+TGG | 0.397832 | 7.1:-36294764 | MS.gene94785:CDS |
| CCTTATTCAGCAAGGTATAT+CGG | 0.413339 | 7.1:-36294803 | MS.gene94785:CDS |
| TCAGCAAGACACTCATCATT+GGG | 0.420252 | 7.1:+36295770 | None:intergenic |
| AGAGGATGTGCCGGTGGCGG+TGG | 0.423979 | 7.1:-36295897 | MS.gene94785:CDS |
| GTCAGCAAGACACTCATCAT+TGG | 0.424092 | 7.1:+36295769 | None:intergenic |
| TTGTTGAAGCAAGAACAAAC+AGG | 0.433134 | 7.1:-36296654 | MS.gene94785:CDS |
| GTAGAACAGGCTGGTGGAAA+AGG | 0.450058 | 7.1:-36294656 | MS.gene94785:CDS |
| TGCAGTAACCAGCTGCTAGA+AGG | 0.454204 | 7.1:+36295044 | None:intergenic |
| CATTGGAAGCACGGAGGAAG+TGG | 0.458160 | 7.1:-36294029 | MS.gene94785:CDS |
| TCAAATTGTTTGAGGTCAAG+TGG | 0.463529 | 7.1:-36295947 | MS.gene94785:CDS |
| TTCACATTAGATCCAATGTA+TGG | 0.463537 | 7.1:-36294968 | MS.gene94785:CDS |
| TTGAGGTCAAGTGGGAGGAC+AGG | 0.467538 | 7.1:-36295938 | MS.gene94785:CDS |
| TGTTCTACAATAAAACTCAT+TGG | 0.468117 | 7.1:+36294671 | None:intergenic |
| CAAGGTGCAGTAAATATTCA+AGG | 0.470496 | 7.1:-36296525 | MS.gene94785:CDS |
| AGGTATTCTCAAATTGTTTG+AGG | 0.481726 | 7.1:-36295955 | MS.gene94785:CDS |
| AGAGACAAGAAAAGTAAGAA+TGG | 0.483894 | 7.1:-36294722 | MS.gene94785:CDS |
| CTAGAAGGTTGCTTCCTGGT+TGG | 0.494022 | 7.1:+36295059 | None:intergenic |
| CGAAGGGAATTACAAGTTGT+GGG | 0.502631 | 7.1:-36294882 | MS.gene94785:CDS |
| GATAATAGCATCAGAGGAAG+AGG | 0.504250 | 7.1:-36295915 | MS.gene94785:CDS |
| AAAGTAAGAATGGAAAGCTT+AGG | 0.504829 | 7.1:-36294712 | MS.gene94785:CDS |
| CTGCACCTTGAACACCAGTA+AGG | 0.504963 | 7.1:+36296538 | None:intergenic |
| GGAAGAGGATGTGCCGGTGG+CGG | 0.506709 | 7.1:-36295900 | MS.gene94785:CDS |
| AAAACAAATTCTCCATACAT+TGG | 0.510690 | 7.1:+36294956 | None:intergenic |
| ACGAAGGGAATTACAAGTTG+TGG | 0.516549 | 7.1:-36294883 | MS.gene94785:CDS |
| CACCATATAGCAGTGTCCTA+TGG | 0.526436 | 7.1:+36294762 | None:intergenic |
| AAATATATTCTTTCAACGAA+GGG | 0.530255 | 7.1:-36294898 | MS.gene94785:CDS |
| AGCAAGGTATATCGGTAGCT+TGG | 0.535697 | 7.1:-36294795 | MS.gene94785:CDS |
| GGAAGCAACCTTCTAGCAGC+TGG | 0.536054 | 7.1:-36295052 | MS.gene94785:CDS |
| AGGTATATCGGTAGCTTGGT+AGG | 0.543122 | 7.1:-36294791 | MS.gene94785:CDS |
| GCTTGGTAGGTGATTTCCAT+AGG | 0.544076 | 7.1:-36294778 | MS.gene94785:CDS |
| CAAATTGTTTGAGGTCAAGT+GGG | 0.545156 | 7.1:-36295946 | MS.gene94785:CDS |
| TAAGGTTTGCCATTAGAACC+TGG | 0.547362 | 7.1:+36294821 | None:intergenic |
| AAAATATATTCTTTCAACGA+AGG | 0.549810 | 7.1:-36294899 | MS.gene94785:CDS |
| GAAATACATTGATGATCTCA+AGG | 0.550390 | 7.1:-36294846 | MS.gene94785:CDS |
| TGAGGTCAAGTGGGAGGACA+GGG | 0.559786 | 7.1:-36295937 | MS.gene94785:CDS |
| CAATCGACACTTACTTCGGT+GGG | 0.560199 | 7.1:+36294599 | None:intergenic |
| ACTTGATGTTGTCTCAAATG+AGG | 0.561343 | 7.1:-36296487 | MS.gene94785:intron |
| ATCAGAGGAAGAGGATGTGC+CGG | 0.561455 | 7.1:-36295906 | MS.gene94785:CDS |
| GTCGAAGACACAAAGTTGGA+AGG | 0.567894 | 7.1:+36296812 | None:intergenic |
| TCAATCGACACTTACTTCGG+TGG | 0.569506 | 7.1:+36294598 | None:intergenic |
| TTCGTTCTAACAATTGGCAA+AGG | 0.569521 | 7.1:-36295001 | MS.gene94785:CDS |
| GACAGGGATAATAGCATCAG+AGG | 0.573560 | 7.1:-36295921 | MS.gene94785:CDS |
| TAACTCTCTTCCACCGCCAC+CGG | 0.575436 | 7.1:+36295887 | None:intergenic |
| GCTGGTGGAAAAGGTTCAGA+TGG | 0.579726 | 7.1:-36294647 | MS.gene94785:CDS |
| ATCTCCAAATACCAAAATCA+GGG | 0.580120 | 7.1:-36294922 | MS.gene94785:CDS |
| ATTGTGAATGTGTGCCAACC+AGG | 0.580359 | 7.1:-36295073 | MS.gene94785:CDS |
| ATATTTGATGAACCATCAAG+TGG | 0.584623 | 7.1:+36295836 | None:intergenic |
| CAACGTGTTCCACTGTACAT+TGG | 0.585023 | 7.1:-36294046 | MS.gene94785:CDS |
| ATTGATGCTGCAGTGTCCAC+TGG | 0.587571 | 7.1:-36295815 | MS.gene94785:CDS |
| CTCTGGAGGAGTGAGATGCA+TGG | 0.594547 | 7.1:-36296745 | MS.gene94785:CDS |
| AAGCATGTGAGTGGCTCTGG+AGG | 0.594581 | 7.1:-36296759 | MS.gene94785:CDS |
| AAGGTGCAGTAAATATTCAA+GGG | 0.595137 | 7.1:-36296524 | MS.gene94785:CDS |
| TGCAGTAAATATTCAAGGGG+AGG | 0.598825 | 7.1:-36296520 | MS.gene94785:CDS |
| TCGTGTCGAAGACACAAAGT+TGG | 0.599445 | 7.1:+36296808 | None:intergenic |
| AAGCACGGAGGAAGTGGAGA+AGG | 0.607805 | 7.1:-36294023 | MS.gene94785:CDS |
| TTTATTGTAGAACAGGCTGG+TGG | 0.610405 | 7.1:-36294662 | MS.gene94785:CDS |
| TGTTGAAGCAAGAACAAACA+GGG | 0.616718 | 7.1:-36296653 | MS.gene94785:CDS |
| ATTGATGATCTCAAGGAACC+AGG | 0.621223 | 7.1:-36294839 | MS.gene94785:CDS |
| TCCACTGTACATTGGAAGCA+CGG | 0.622859 | 7.1:-36294038 | MS.gene94785:CDS |
| GGCTGTTGGTGAAGTAGCTG+CGG | 0.625568 | 7.1:-36296724 | MS.gene94785:CDS |
| TCGAAGACACAAAGTTGGAA+GGG | 0.631419 | 7.1:+36296813 | None:intergenic |
| ATGGCAAACCTTATTCAGCA+AGG | 0.633183 | 7.1:-36294811 | MS.gene94785:CDS |
| AGAGGAAGAGGATGTGCCGG+TGG | 0.636345 | 7.1:-36295903 | MS.gene94785:CDS |
| TCAAGAAGAAAGCATGTGAG+TGG | 0.640509 | 7.1:-36296768 | MS.gene94785:CDS |
| ATTGTTTGAGGTCAAGTGGG+AGG | 0.641340 | 7.1:-36295943 | MS.gene94785:CDS |
| GGAGTGAGATGCATGGCTGT+TGG | 0.653986 | 7.1:-36296738 | MS.gene94785:CDS |
| CATAGGACACTGCTATATGG+TGG | 0.655058 | 7.1:-36294761 | MS.gene94785:CDS |
| TGGAAGGGACATAAACGTGA+GGG | 0.656675 | 7.1:+36296828 | None:intergenic |
| AGGTGCAGTAAATATTCAAG+GGG | 0.670231 | 7.1:-36296523 | MS.gene94785:CDS |
| TCCGTGCTTCCAATGTACAG+TGG | 0.688061 | 7.1:+36294037 | None:intergenic |
| TTGGAAGGGACATAAACGTG+AGG | 0.691452 | 7.1:+36296827 | None:intergenic |
| CAGCAAGACACTCATCATTG+GGG | 0.711192 | 7.1:+36295771 | None:intergenic |
| GATGAGTGTCTTGCTGACGT+TGG | 0.721138 | 7.1:-36295764 | MS.gene94785:CDS |
| GTTGAAGCAAGAACAAACAG+GGG | 0.727918 | 7.1:-36296652 | MS.gene94785:CDS |
| ACTGTACATTGGAAGCACGG+AGG | 0.788040 | 7.1:-36294035 | MS.gene94785:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | AAAAATACAAAAAGTAAGAA+CGG | + | chr7.1:36295644-36295663 | None:intergenic | 15.0% |
| !! | AACCATGATAAAAATATAAA+TGG | - | chr7.1:36296773-36296792 | MS.gene94785:CDS | 15.0% |
| !! | TAAAAATATAAATGGTATGA+TGG | - | chr7.1:36296781-36296800 | MS.gene94785:CDS | 15.0% |
| !!! | ATTTAATTAGTTTTGAACTA+GGG | - | chr7.1:36294442-36294461 | MS.gene94785:intron | 15.0% |
| !!! | TACCATTTATATTTTTATCA+TGG | + | chr7.1:36296778-36296797 | None:intergenic | 15.0% |
| !!! | TATTTAATTAGTTTTGAACT+AGG | - | chr7.1:36294441-36294460 | MS.gene94785:intron | 15.0% |
| !!! | TGTTTTATATTTTTTTGTTC+AGG | - | chr7.1:36294916-36294935 | MS.gene94785:CDS | 15.0% |
| !!! | TTAAACAGTGTTTTAAAAAT+CGG | + | chr7.1:36295751-36295770 | None:intergenic | 15.0% |
| !!! | TTAAACTTAAAGATTTTCTT+AGG | - | chr7.1:36294865-36294884 | MS.gene94785:CDS | 15.0% |
| !! | AAAATACAAAAAGTAAGAAC+GGG | + | chr7.1:36295643-36295662 | None:intergenic | 20.0% |
| !! | AAAATATATTCTTTCAACGA+AGG | - | chr7.1:36295992-36296011 | MS.gene94785:intron | 20.0% |
| !! | AAATATATTCTTTCAACGAA+GGG | - | chr7.1:36295993-36296012 | MS.gene94785:intron | 20.0% |
| !! | AATATCAATTATTTCAACCT+CGG | + | chr7.1:36294537-36294556 | None:intergenic | 20.0% |
| !! | TTATAGTAGCAAATAAACAT+AGG | - | chr7.1:36295530-36295549 | MS.gene94785:intron | 20.0% |
| !!! | ATTTAATTTTCCCTTTTTTC+TGG | - | chr7.1:36296812-36296831 | MS.gene94785:CDS | 20.0% |
| !!! | GATTGTTTTCATTTATGATT+AGG | - | chr7.1:36295193-36295212 | MS.gene94785:intron | 20.0% |
| !!! | TAAGTAATTTGTAGAGTTTA+GGG | - | chr7.1:36296443-36296462 | MS.gene94785:intron | 20.0% |
| ! | AAAACAAATTCTCCATACAT+TGG | + | chr7.1:36295938-36295957 | None:intergenic | 25.0% |
| ! | AATAAACTGAAATGAGCATA+TGG | - | chr7.1:36296467-36296486 | MS.gene94785:intron | 25.0% |
| ! | AGTAACTTAGAAACCTAATT+AGG | - | chr7.1:36295410-36295429 | MS.gene94785:intron | 25.0% |
| ! | ATTATCTTCGGTGATAATTT+AGG | - | chr7.1:36294660-36294679 | MS.gene94785:CDS | 25.0% |
| ! | CTACTATAAGTTTCAAATGA+AGG | + | chr7.1:36295519-36295538 | None:intergenic | 25.0% |
| ! | TAATTGAACCAATCCTAATT+AGG | + | chr7.1:36295426-36295445 | None:intergenic | 25.0% |
| ! | TACTGACATAAGTACTTAAA+AGG | + | chr7.1:36296530-36296549 | None:intergenic | 25.0% |
| ! | TGTTCTACAATAAAACTCAT+TGG | + | chr7.1:36296223-36296242 | None:intergenic | 25.0% |
| !! | GAATATATTTTCCCTGATTT+TGG | + | chr7.1:36295983-36296002 | None:intergenic | 25.0% |
| !! | GTAAGTAATTTGTAGAGTTT+AGG | - | chr7.1:36296442-36296461 | MS.gene94785:intron | 25.0% |
| !!! | AATGAGTTTTATTGTAGAAC+AGG | - | chr7.1:36296222-36296241 | MS.gene94785:intron | 25.0% |
| !!! | TGTTTTGAATAGTATTTCGT+TGG | - | chr7.1:36294284-36294303 | MS.gene94785:intron | 25.0% |
| AAAGTAAGAATGGAAAGCTT+AGG | - | chr7.1:36296179-36296198 | MS.gene94785:intron | 30.0% | |
| AAGGTGCAGTAAATATTCAA+GGG | - | chr7.1:36294367-36294386 | MS.gene94785:intron | 30.0% | |
| AATCTCCAAATACCAAAATC+AGG | - | chr7.1:36295968-36295987 | MS.gene94785:intron | 30.0% | |
| ACATTTATGACCAAGTATGT+AGG | - | chr7.1:36294839-36294858 | MS.gene94785:CDS | 30.0% | |
| AGAGACAAGAAAAGTAAGAA+TGG | - | chr7.1:36296169-36296188 | MS.gene94785:intron | 30.0% | |
| AGGTATTCTCAAATTGTTTG+AGG | - | chr7.1:36294936-36294955 | MS.gene94785:CDS | 30.0% | |
| AGTTTAAGTACCTACATACT+TGG | + | chr7.1:36294852-36294871 | None:intergenic | 30.0% | |
| ATAAGTGTGAATGATTCAAG+TGG | - | chr7.1:36295307-36295326 | MS.gene94785:intron | 30.0% | |
| ATATTTGATGAACCATCAAG+TGG | + | chr7.1:36295058-36295077 | None:intergenic | 30.0% | |
| ATCATGGTTTAGTAGAAGAT+CGG | + | chr7.1:36296762-36296781 | None:intergenic | 30.0% | |
| ATCTCCAAATACCAAAATCA+GGG | - | chr7.1:36295969-36295988 | MS.gene94785:intron | 30.0% | |
| ATGAATCTGTCCAGAAAAAA+GGG | + | chr7.1:36296825-36296844 | None:intergenic | 30.0% | |
| ATGTAAACAGATTGCTTCTT+TGG | - | chr7.1:36294308-36294327 | MS.gene94785:intron | 30.0% | |
| ATGTAACAGTCCAAAAATTG+TGG | - | chr7.1:36296733-36296752 | MS.gene94785:CDS | 30.0% | |
| CAGAGAATCACAATTAAATG+CGG | - | chr7.1:36294558-36294577 | MS.gene94785:intron | 30.0% | |
| CTTAATGTTGCAATGAATTG+CGG | - | chr7.1:36296665-36296684 | MS.gene94785:CDS | 30.0% | |
| CTTAGAAACCTAATTAGGAT+TGG | - | chr7.1:36295415-36295434 | MS.gene94785:intron | 30.0% | |
| GTAATCTTCGTTCTAACAAT+TGG | - | chr7.1:36295884-36295903 | MS.gene94785:CDS | 30.0% | |
| TAAGTACTTAAAAGGCTGTT+TGG | + | chr7.1:36296522-36296541 | None:intergenic | 30.0% | |
| TACATATGTAAATTGCAGCT+TGG | - | chr7.1:36295776-36295795 | MS.gene94785:CDS | 30.0% | |
| TAGCTTCTTCAAAAACAATG+CGG | - | chr7.1:36294693-36294712 | MS.gene94785:CDS | 30.0% | |
| TTATGATTAGGAATCGAACT+CGG | - | chr7.1:36295205-36295224 | MS.gene94785:intron | 30.0% | |
| TTCACATTAGATCCAATGTA+TGG | - | chr7.1:36295923-36295942 | MS.gene94785:CDS | 30.0% | |
| TTGAGACCTAAAAAGTTTCA+TGG | - | chr7.1:36294511-36294530 | MS.gene94785:intron | 30.0% | |
| ! | AACCAGATTAAGGTATCATT+GGG | + | chr7.1:36295591-36295610 | None:intergenic | 30.0% |
| ! | AGCTTATAACATTGACTAGT+TGG | - | chr7.1:36294214-36294233 | MS.gene94785:intron | 30.0% |
| ! | ATCTAAAAGACTTGTTTGGT+TGG | + | chr7.1:36296574-36296593 | None:intergenic | 30.0% |
| ! | CAACATCTAAAAGACTTGTT+TGG | + | chr7.1:36296578-36296597 | None:intergenic | 30.0% |
| ! | GAAATACATTGATGATCTCA+AGG | - | chr7.1:36296045-36296064 | MS.gene94785:intron | 30.0% |
| ! | GCTAATATTTCTAACCTTAC+TGG | - | chr7.1:36294339-36294358 | MS.gene94785:intron | 30.0% |
| ! | TAACCAGATTAAGGTATCAT+TGG | + | chr7.1:36295592-36295611 | None:intergenic | 30.0% |
| !! | ATTTTTGGACTGTTACATCA+AGG | + | chr7.1:36296731-36296750 | None:intergenic | 30.0% |
| !! | TCTTACTTTTCTTGTCTCTA+GGG | + | chr7.1:36296168-36296187 | None:intergenic | 30.0% |
| !! | TTCTTACTTTTCTTGTCTCT+AGG | + | chr7.1:36296169-36296188 | None:intergenic | 30.0% |
| !! | TTTTCCCTGATTTTGGTATT+TGG | + | chr7.1:36295976-36295995 | None:intergenic | 30.0% |
| AAGTCAATCGACACTTACTT+CGG | + | chr7.1:36296299-36296318 | None:intergenic | 35.0% | |
| ACCACTGTTTAACCAGATTA+AGG | + | chr7.1:36295601-36295620 | None:intergenic | 35.0% | |
| ACCTTAATCTGGTTAAACAG+TGG | - | chr7.1:36295597-36295616 | MS.gene94785:intron | 35.0% | |
| ACTTGATGTTGTCTCAAATG+AGG | - | chr7.1:36294404-36294423 | MS.gene94785:intron | 35.0% | |
| AGGTGCAGTAAATATTCAAG+GGG | - | chr7.1:36294368-36294387 | MS.gene94785:intron | 35.0% | |
| ATCACATTTGTCATAAGCCA+AGG | - | chr7.1:36296629-36296648 | MS.gene94785:CDS | 35.0% | |
| ATCCCAATGATACCTTAATC+TGG | - | chr7.1:36295586-36295605 | MS.gene94785:intron | 35.0% | |
| ATCTTCGGTGATAATTTAGG+TGG | - | chr7.1:36294663-36294682 | MS.gene94785:CDS | 35.0% | |
| ATTCAAAGCGACTCTAATTG+AGG | + | chr7.1:36294728-36294747 | None:intergenic | 35.0% | |
| CAAGGTGCAGTAAATATTCA+AGG | - | chr7.1:36294366-36294385 | MS.gene94785:intron | 35.0% | |
| CCTTATTCAGCAAGGTATAT+CGG | - | chr7.1:36296088-36296107 | MS.gene94785:intron | 35.0% | |
| CGCAATTCATTGCAACATTA+AGG | + | chr7.1:36296667-36296686 | None:intergenic | 35.0% | |
| GATGAATCTGTCCAGAAAAA+AGG | + | chr7.1:36296826-36296845 | None:intergenic | 35.0% | |
| GTATTAGAAGGGTTTACTCT+TGG | - | chr7.1:36294814-36294833 | MS.gene94785:CDS | 35.0% | |
| GTTGTATTTGATCCACTTGA+TGG | - | chr7.1:36295043-36295062 | MS.gene94785:CDS | 35.0% | |
| TAATTACGCGCTTACAGTTT+AGG | - | chr7.1:36296327-36296346 | MS.gene94785:intron | 35.0% | |
| TCTTCGGTGATAATTTAGGT+GGG | - | chr7.1:36294664-36294683 | MS.gene94785:CDS | 35.0% | |
| TGTTGAAGCAAGAACAAACA+GGG | - | chr7.1:36294238-36294257 | MS.gene94785:intron | 35.0% | |
| TTAGATGTTGCTAAAAGCCA+CGG | - | chr7.1:36296588-36296607 | MS.gene94785:CDS | 35.0% | |
| TTCGTTCTAACAATTGGCAA+AGG | - | chr7.1:36295890-36295909 | MS.gene94785:CDS | 35.0% | |
| TTGTTGAAGCAAGAACAAAC+AGG | - | chr7.1:36294237-36294256 | MS.gene94785:intron | 35.0% | |
| ! | CAAATTGTTTGAGGTCAAGT+GGG | - | chr7.1:36294945-36294964 | MS.gene94785:CDS | 35.0% |
| ! | GCTAAAGGAGTGTATTAGAA+GGG | - | chr7.1:36294803-36294822 | MS.gene94785:CDS | 35.0% |
| ! | TCAAATTGTTTGAGGTCAAG+TGG | - | chr7.1:36294944-36294963 | MS.gene94785:CDS | 35.0% |
| ! | TGCTAAAGGAGTGTATTAGA+AGG | - | chr7.1:36294802-36294821 | MS.gene94785:CDS | 35.0% |
| !!! | AGTTTTATTGTAGAACAGGC+TGG | - | chr7.1:36296226-36296245 | MS.gene94785:intron | 35.0% |
| !!! | CAGTGTTTTAAAAATCGGAC+TGG | + | chr7.1:36295746-36295765 | None:intergenic | 35.0% |
| AATCCCAAAAATCGAACCAG+TGG | + | chr7.1:36295095-36295114 | None:intergenic | 40.0% | |
| AATGTTAAACCCACTTGGGT+TGG | - | chr7.1:36294583-36294602 | MS.gene94785:intron | 40.0% | |
| ACGAAGGGAATTACAAGTTG+TGG | - | chr7.1:36296008-36296027 | MS.gene94785:intron | 40.0% | |
| AGGAATCGAACTCGGTAATT+TGG | - | chr7.1:36295213-36295232 | MS.gene94785:intron | 40.0% | |
| ATGGCAAACCTTATTCAGCA+AGG | - | chr7.1:36296080-36296099 | MS.gene94785:intron | 40.0% | |
| CATAAACGTGAGGGAGAATA+TGG | + | chr7.1:36294057-36294076 | None:intergenic | 40.0% | |
| CCGATATACCTTGCTGAATA+AGG | + | chr7.1:36296091-36296110 | None:intergenic | 40.0% | |
| CGAAGGGAATTACAAGTTGT+GGG | - | chr7.1:36296009-36296028 | MS.gene94785:intron | 40.0% | |
| CTGCTATATGGTGGCATTTA+TGG | - | chr7.1:36296139-36296158 | MS.gene94785:intron | 40.0% | |
| CTTTCCGATCGCGATTTAAT+CGG | + | chr7.1:36295706-36295725 | None:intergenic | 40.0% | |
| GAATCGAACTCGGTAATTTG+GGG | - | chr7.1:36295215-36295234 | MS.gene94785:intron | 40.0% | |
| GACCTCTTTCTGTTAGAAAC+CGG | - | chr7.1:36294484-36294503 | MS.gene94785:intron | 40.0% | |
| GACTGCGGATAATATGCTAA+AGG | - | chr7.1:36294788-36294807 | MS.gene94785:CDS | 40.0% | |
| GATAATAGCATCAGAGGAAG+AGG | - | chr7.1:36294976-36294995 | MS.gene94785:CDS | 40.0% | |
| GGAATCGAACTCGGTAATTT+GGG | - | chr7.1:36295214-36295233 | MS.gene94785:intron | 40.0% | |
| GGCTAATGTTAAACCCACTT+GGG | - | chr7.1:36294579-36294598 | MS.gene94785:intron | 40.0% | |
| GTGTCAGGTTCGATTATCTT+CGG | - | chr7.1:36294648-36294667 | MS.gene94785:CDS | 40.0% | |
| GTTGAAGCAAGAACAAACAG+GGG | - | chr7.1:36294239-36294258 | MS.gene94785:intron | 40.0% | |
| TAAGGTTTGCCATTAGAACC+TGG | + | chr7.1:36296073-36296092 | None:intergenic | 40.0% | |
| TATTATCCGCAGTCGTGATT+TGG | + | chr7.1:36294782-36294801 | None:intergenic | 40.0% | |
| TCAGCAAGACACTCATCATT+GGG | + | chr7.1:36295124-36295143 | None:intergenic | 40.0% | |
| TCCAAGCATTCACTTACTGT+GGG | + | chr7.1:36295169-36295188 | None:intergenic | 40.0% | |
| TCGAAGACACAAAGTTGGAA+GGG | + | chr7.1:36294081-36294100 | None:intergenic | 40.0% | |
| TCTAACCTTACTGGTGTTCA+AGG | - | chr7.1:36294348-36294367 | MS.gene94785:intron | 40.0% | |
| TGAACCGATTAAATCGCGAT+CGG | - | chr7.1:36295699-36295718 | MS.gene94785:intron | 40.0% | |
| TGCAGTAAATATTCAAGGGG+AGG | - | chr7.1:36294371-36294390 | MS.gene94785:intron | 40.0% | |
| TTCCAAGCATTCACTTACTG+TGG | + | chr7.1:36295170-36295189 | None:intergenic | 40.0% | |
| TTCCATAGGACACTGCTATA+TGG | - | chr7.1:36296127-36296146 | MS.gene94785:intron | 40.0% | |
| TTTATTGTAGAACAGGCTGG+TGG | - | chr7.1:36296229-36296248 | MS.gene94785:intron | 40.0% | |
| ! | AATCGGACTGGAGATCAAAT+TGG | + | chr7.1:36295734-36295753 | None:intergenic | 40.0% |
| ! | ATTGATGATCTCAAGGAACC+AGG | - | chr7.1:36296052-36296071 | MS.gene94785:intron | 40.0% |
| ! | TCAAGAAGAAAGCATGTGAG+TGG | - | chr7.1:36294123-36294142 | MS.gene94785:intron | 40.0% |
| ! | TTGCTAAAAGCCACGGTTTT+AGG | - | chr7.1:36296595-36296614 | MS.gene94785:CDS | 40.0% |
| !! | TTGGCCTACTGTATTGGTTA+GGG | - | chr7.1:36294602-36294621 | MS.gene94785:intron | 40.0% |
| !!! | CTTTTTAGGTCTCAATCCTC+CGG | + | chr7.1:36294506-36294525 | None:intergenic | 40.0% |
| !!! | TGTCCACTGGTTCGATTTTT+GGG | - | chr7.1:36295089-36295108 | MS.gene94785:CDS | 40.0% |
| AGCAAGGTATATCGGTAGCT+TGG | - | chr7.1:36296096-36296115 | MS.gene94785:intron | 45.0% | |
| AGGTATATCGGTAGCTTGGT+AGG | - | chr7.1:36296100-36296119 | MS.gene94785:intron | 45.0% | |
| AGGTCCCTAACCAATACAGT+AGG | + | chr7.1:36294609-36294628 | None:intergenic | 45.0% | |
| ATTGTGAATGTGTGCCAACC+AGG | - | chr7.1:36295818-36295837 | MS.gene94785:CDS | 45.0% | |
| CAACGTGTTCCACTGTACAT+TGG | - | chr7.1:36296845-36296864 | MS.gene94785:CDS | 45.0% | |
| CAATCGACACTTACTTCGGT+GGG | + | chr7.1:36296295-36296314 | None:intergenic | 45.0% | |
| CACCATATAGCAGTGTCCTA+TGG | + | chr7.1:36296132-36296151 | None:intergenic | 45.0% | |
| CAGCAAGACACTCATCATTG+GGG | + | chr7.1:36295123-36295142 | None:intergenic | 45.0% | |
| CATAGGACACTGCTATATGG+TGG | - | chr7.1:36296130-36296149 | MS.gene94785:intron | 45.0% | |
| CATTGGGATCAAACCAACTG+AGG | + | chr7.1:36295575-36295594 | None:intergenic | 45.0% | |
| CCAAGCATTCACTTACTGTG+GGG | + | chr7.1:36295168-36295187 | None:intergenic | 45.0% | |
| CCTAAAAAGTTTCATGGCCG+AGG | - | chr7.1:36294517-36294536 | MS.gene94785:intron | 45.0% | |
| CGGCTAATGTTAAACCCACT+TGG | - | chr7.1:36294578-36294597 | MS.gene94785:intron | 45.0% | |
| CTCCGGTTTCTAACAGAAAG+AGG | + | chr7.1:36294489-36294508 | None:intergenic | 45.0% | |
| CTCTTTCTGTTAGAAACCGG+AGG | - | chr7.1:36294487-36294506 | MS.gene94785:intron | 45.0% | |
| GACAGGGATAATAGCATCAG+AGG | - | chr7.1:36294970-36294989 | MS.gene94785:CDS | 45.0% | |
| GATAATCGAACCTGACACCT+AGG | + | chr7.1:36294646-36294665 | None:intergenic | 45.0% | |
| GCTTGGTAGGTGATTTCCAT+AGG | - | chr7.1:36296113-36296132 | MS.gene94785:intron | 45.0% | |
| GTAATCGTGACCTAAAACCG+TGG | + | chr7.1:36296608-36296627 | None:intergenic | 45.0% | |
| GTCAGCAAGACACTCATCAT+TGG | + | chr7.1:36295125-36295144 | None:intergenic | 45.0% | |
| GTCGAAGACACAAAGTTGGA+AGG | + | chr7.1:36294082-36294101 | None:intergenic | 45.0% | |
| TAAGGATCACAACACGACCT+TGG | + | chr7.1:36296649-36296668 | None:intergenic | 45.0% | |
| TCAATCGACACTTACTTCGG+TGG | + | chr7.1:36296296-36296315 | None:intergenic | 45.0% | |
| TCCACTGTACATTGGAAGCA+CGG | - | chr7.1:36296853-36296872 | MS.gene94785:CDS | 45.0% | |
| TCGTGTCGAAGACACAAAGT+TGG | + | chr7.1:36294086-36294105 | None:intergenic | 45.0% | |
| TGCAATCCAAATCACGACTG+CGG | - | chr7.1:36294773-36294792 | MS.gene94785:CDS | 45.0% | |
| TGGAAGGGACATAAACGTGA+GGG | + | chr7.1:36294066-36294085 | None:intergenic | 45.0% | |
| TTGGAAGGGACATAAACGTG+AGG | + | chr7.1:36294067-36294086 | None:intergenic | 45.0% | |
| TTTGAACTAGGGTCGAACTC+TGG | - | chr7.1:36294453-36294472 | MS.gene94785:intron | 45.0% | |
| ! | AGATCGGCAGCCACAATTTT+TGG | + | chr7.1:36296746-36296765 | None:intergenic | 45.0% |
| ! | ATTGTTTGAGGTCAAGTGGG+AGG | - | chr7.1:36294948-36294967 | MS.gene94785:CDS | 45.0% |
| ! | CCTCGGCCATGAAACTTTTT+AGG | + | chr7.1:36294520-36294539 | None:intergenic | 45.0% |
| ! | CTCAAGGAACCAGGTTCTAA+TGG | - | chr7.1:36296061-36296080 | MS.gene94785:intron | 45.0% |
| !! | ACTGTATTGGTTAGGGACCT+GGG | - | chr7.1:36294609-36294628 | MS.gene94785:intron | 45.0% |
| !! | AGAACGGGTTGAACTGATTG+TGG | + | chr7.1:36295628-36295647 | None:intergenic | 45.0% |
| !! | GTTGGCCTACTGTATTGGTT+AGG | - | chr7.1:36294601-36294620 | MS.gene94785:intron | 45.0% |
| !! | TACTGTATTGGTTAGGGACC+TGG | - | chr7.1:36294608-36294627 | MS.gene94785:intron | 45.0% |
| !!! | GTGTCCACTGGTTCGATTTT+TGG | - | chr7.1:36295088-36295107 | MS.gene94785:CDS | 45.0% |
| ATACAGTAGGCCAACCCAAG+TGG | + | chr7.1:36294596-36294615 | None:intergenic | 50.0% | |
| ATCAGAGGAAGAGGATGTGC+CGG | - | chr7.1:36294985-36295004 | MS.gene94785:CDS | 50.0% | |
| ATTGATGCTGCAGTGTCCAC+TGG | - | chr7.1:36295076-36295095 | MS.gene94785:CDS | 50.0% | |
| CCCCACAGTAAGTGAATGCT+TGG | - | chr7.1:36295165-36295184 | MS.gene94785:intron | 50.0% | |
| CTAGAAGGTTGCTTCCTGGT+TGG | + | chr7.1:36295835-36295854 | None:intergenic | 50.0% | |
| CTGAGGAACTTGTCTGCTCT+CGG | + | chr7.1:36295558-36295577 | None:intergenic | 50.0% | |
| CTGCACCTTGAACACCAGTA+AGG | + | chr7.1:36294356-36294375 | None:intergenic | 50.0% | |
| GAGCAGACAAGTTCCTCAGT+TGG | - | chr7.1:36295559-36295578 | MS.gene94785:intron | 50.0% | |
| GATGAGTGTCTTGCTGACGT+TGG | - | chr7.1:36295127-36295146 | MS.gene94785:intron | 50.0% | |
| GCGGTGGAAGAGAGTTATTC+AGG | - | chr7.1:36295010-36295029 | MS.gene94785:CDS | 50.0% | |
| GCTGGTGGAAAAGGTTCAGA+TGG | - | chr7.1:36296244-36296263 | MS.gene94785:intron | 50.0% | |
| GTAAACGAGCCTACGTCATC+AGG | + | chr7.1:36295245-36295264 | None:intergenic | 50.0% | |
| GTAGAACAGGCTGGTGGAAA+AGG | - | chr7.1:36296235-36296254 | MS.gene94785:intron | 50.0% | |
| TACAGTAGGCCAACCCAAGT+GGG | + | chr7.1:36294595-36294614 | None:intergenic | 50.0% | |
| TCCGTGCTTCCAATGTACAG+TGG | + | chr7.1:36296857-36296876 | None:intergenic | 50.0% | |
| TGCAGTAACCAGCTGCTAGA+AGG | + | chr7.1:36295850-36295869 | None:intergenic | 50.0% | |
| ! | ACTGTACATTGGAAGCACGG+AGG | - | chr7.1:36296856-36296875 | MS.gene94785:CDS | 50.0% |
| ! | AGAAAGCATGTGAGTGGCTC+TGG | - | chr7.1:36294129-36294148 | MS.gene94785:intron | 50.0% |
| ! | CGAACTCGGTAATTTGGGGT+TGG | - | chr7.1:36295219-36295238 | MS.gene94785:intron | 50.0% |
| !! | CTTGGGTTGGCCTACTGTAT+TGG | - | chr7.1:36294596-36294615 | MS.gene94785:intron | 50.0% |
| AAGCACGGAGGAAGTGGAGA+AGG | - | chr7.1:36296868-36296887 | MS.gene94785:CDS | 55.0% | |
| GCTGCTAGAAGGTTGCTTCC+TGG | + | chr7.1:36295839-36295858 | None:intergenic | 55.0% | |
| GGAAGCAACCTTCTAGCAGC+TGG | - | chr7.1:36295839-36295858 | MS.gene94785:CDS | 55.0% | |
| GGAGTGAGATGCATGGCTGT+TGG | - | chr7.1:36294153-36294172 | MS.gene94785:intron | 55.0% | |
| TAACTCTCTTCCACCGCCAC+CGG | + | chr7.1:36295007-36295026 | None:intergenic | 55.0% | |
| TGAGGTCAAGTGGGAGGACA+GGG | - | chr7.1:36294954-36294973 | MS.gene94785:CDS | 55.0% | |
| TTGAGGTCAAGTGGGAGGAC+AGG | - | chr7.1:36294953-36294972 | MS.gene94785:CDS | 55.0% | |
| ! | CATTGGAAGCACGGAGGAAG+TGG | - | chr7.1:36296862-36296881 | MS.gene94785:CDS | 55.0% |
| ! | CTCTGGAGGAGTGAGATGCA+TGG | - | chr7.1:36294146-36294165 | MS.gene94785:intron | 55.0% |
| ! | GGCTGTTGGTGAAGTAGCTG+CGG | - | chr7.1:36294167-36294186 | MS.gene94785:intron | 55.0% |
| ! | GTGTGCTACTCCTAGGTGTC+AGG | - | chr7.1:36294633-36294652 | MS.gene94785:CDS | 55.0% |
| !! | AAGCATGTGAGTGGCTCTGG+AGG | - | chr7.1:36294132-36294151 | MS.gene94785:intron | 55.0% |
| AGAGGAAGAGGATGTGCCGG+TGG | - | chr7.1:36294988-36295007 | MS.gene94785:CDS | 60.0% | |
| CCTAGGAGTAGCACACTCCC+AGG | + | chr7.1:36294629-36294648 | None:intergenic | 60.0% | |
| ! | CCTGGGAGTGTGCTACTCCT+AGG | - | chr7.1:36294626-36294645 | MS.gene94785:CDS | 60.0% |
| !! | TGGGGTTGGCCTGATGACGT+AGG | - | chr7.1:36295233-36295252 | MS.gene94785:intron | 60.0% |
| ! | GGAAGAGGATGTGCCGGTGG+CGG | - | chr7.1:36294991-36295010 | MS.gene94785:CDS | 65.0% |
| ! | AGAGGATGTGCCGGTGGCGG+TGG | - | chr7.1:36294994-36295013 | MS.gene94785:CDS | 70.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr7.1 | gene | 36294003 | 36296910 | 36294003 | ID=MS.gene94785 |
| chr7.1 | mRNA | 36294003 | 36296910 | 36294003 | ID=MS.gene94785.t1;Parent=MS.gene94785 |
| chr7.1 | exon | 36296488 | 36296910 | 36296488 | ID=MS.gene94785.t1.exon1;Parent=MS.gene94785.t1 |
| chr7.1 | CDS | 36296488 | 36296910 | 36296488 | ID=cds.MS.gene94785.t1;Parent=MS.gene94785.t1 |
| chr7.1 | exon | 36295742 | 36295975 | 36295742 | ID=MS.gene94785.t1.exon2;Parent=MS.gene94785.t1 |
| chr7.1 | CDS | 36295742 | 36295975 | 36295742 | ID=cds.MS.gene94785.t1;Parent=MS.gene94785.t1 |
| chr7.1 | exon | 36294613 | 36295119 | 36294613 | ID=MS.gene94785.t1.exon3;Parent=MS.gene94785.t1 |
| chr7.1 | CDS | 36294613 | 36295119 | 36294613 | ID=cds.MS.gene94785.t1;Parent=MS.gene94785.t1 |
| chr7.1 | exon | 36294003 | 36294074 | 36294003 | ID=MS.gene94785.t1.exon4;Parent=MS.gene94785.t1 |
| chr7.1 | CDS | 36294003 | 36294074 | 36294003 | ID=cds.MS.gene94785.t1;Parent=MS.gene94785.t1 |
| Gene Sequence |
| Protein sequence |
