Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene49048.t1 | XP_003592305.1 | 91.4 | 292 | 3 | 1 | 1 | 270 | 1 | 292 | 1.30E-136 | 495.7 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene49048.t1 | Q9FJ82 | 78.2 | 257 | 55 | 1 | 15 | 270 | 32 | 288 | 2.1e-106 | 386.7 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene49048.t1 | G7IAQ3 | 91.4 | 292 | 3 | 1 | 1 | 270 | 1 | 292 | 9.6e-137 | 495.7 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| MS.gene049137 | MS.gene49048 | 0.858088 | 1.05E-62 | -1.69E-46 |
| MS.gene049284 | MS.gene49048 | 0.826973 | 2.02E-54 | -1.69E-46 |
| MS.gene049351 | MS.gene49048 | 0.841458 | 4.69E-58 | -1.69E-46 |
| MS.gene049356 | MS.gene49048 | 0.805113 | 1.56E-49 | -1.69E-46 |
| MS.gene049369 | MS.gene49048 | 0.800982 | 1.12E-48 | -1.69E-46 |
| MS.gene049389 | MS.gene49048 | 0.800584 | 1.35E-48 | -1.69E-46 |
| MS.gene049427 | MS.gene49048 | 0.892511 | 1.48E-74 | -1.69E-46 |
| MS.gene049491 | MS.gene49048 | 0.851031 | 1.16E-60 | -1.69E-46 |
| MS.gene049609 | MS.gene49048 | 0.815111 | 1.09E-51 | -1.69E-46 |
| MS.gene049614 | MS.gene49048 | 0.854244 | 1.40E-61 | -1.69E-46 |
| MS.gene049661 | MS.gene49048 | 0.871935 | 4.68E-67 | -1.69E-46 |
| MS.gene049662 | MS.gene49048 | 0.865842 | 4.40E-65 | -1.69E-46 |
| MS.gene049758 | MS.gene49048 | 0.820141 | 8.02E-53 | -1.69E-46 |
| MS.gene049760 | MS.gene49048 | 0.8329 | 7.26E-56 | -1.69E-46 |
| MS.gene049805 | MS.gene49048 | 0.881786 | 1.80E-70 | -1.69E-46 |
| MS.gene050076 | MS.gene49048 | 0.882451 | 1.03E-70 | -1.69E-46 |
| MS.gene050301 | MS.gene49048 | 0.873022 | 2.03E-67 | -1.69E-46 |
| MS.gene050397 | MS.gene49048 | 0.830488 | 2.85E-55 | -1.69E-46 |
| MS.gene050404 | MS.gene49048 | 0.813271 | 2.78E-51 | -1.69E-46 |
| MS.gene050406 | MS.gene49048 | 0.814937 | 1.19E-51 | -1.69E-46 |
| MS.gene050432 | MS.gene49048 | 0.882466 | 1.02E-70 | -1.69E-46 |
| MS.gene050464 | MS.gene49048 | 0.830458 | 2.90E-55 | -1.69E-46 |
| MS.gene050529 | MS.gene49048 | 0.858099 | 1.04E-62 | -1.69E-46 |
| MS.gene050593 | MS.gene49048 | 0.821714 | 3.49E-53 | -1.69E-46 |
| MS.gene050670 | MS.gene49048 | 0.846032 | 2.80E-59 | -1.69E-46 |
| MS.gene050747 | MS.gene49048 | 0.806605 | 7.59E-50 | -1.69E-46 |
| MS.gene050767 | MS.gene49048 | 0.881732 | 1.88E-70 | -1.69E-46 |
| MS.gene050770 | MS.gene49048 | 0.885327 | 8.94E-72 | -1.69E-46 |
| MS.gene050772 | MS.gene49048 | 0.81439 | 1.58E-51 | -1.69E-46 |
| MS.gene050783 | MS.gene49048 | 0.82757 | 1.45E-54 | -1.69E-46 |
| MS.gene050812 | MS.gene49048 | 0.844483 | 7.35E-59 | -1.69E-46 |
| MS.gene05100 | MS.gene49048 | 0.807364 | 5.24E-50 | -1.69E-46 |
| MS.gene05101 | MS.gene49048 | 0.888622 | 5.01E-73 | -1.69E-46 |
| MS.gene05105 | MS.gene49048 | 0.853228 | 2.74E-61 | -1.69E-46 |
| MS.gene051228 | MS.gene49048 | 0.835458 | 1.66E-56 | -1.69E-46 |
| MS.gene051387 | MS.gene49048 | 0.834659 | 2.64E-56 | -1.69E-46 |
| MS.gene051471 | MS.gene49048 | 0.869658 | 2.62E-66 | -1.69E-46 |
| MS.gene051582 | MS.gene49048 | 0.832726 | 8.02E-56 | -1.69E-46 |
| MS.gene051605 | MS.gene49048 | 0.813174 | 2.93E-51 | -1.69E-46 |
| MS.gene051666 | MS.gene49048 | 0.876671 | 1.16E-68 | -1.69E-46 |
| MS.gene051692 | MS.gene49048 | 0.828941 | 6.79E-55 | -1.69E-46 |
| MS.gene051877 | MS.gene49048 | 0.81699 | 4.16E-52 | -1.69E-46 |
| MS.gene052078 | MS.gene49048 | 0.879042 | 1.72E-69 | -1.69E-46 |
| MS.gene052178 | MS.gene49048 | 0.824306 | 8.67E-54 | -1.69E-46 |
| MS.gene052188 | MS.gene49048 | 0.851414 | 9.01E-61 | -1.69E-46 |
| MS.gene052253 | MS.gene49048 | 0.832029 | 1.19E-55 | -1.69E-46 |
| MS.gene052271 | MS.gene49048 | 0.828582 | 8.30E-55 | -1.69E-46 |
| MS.gene052290 | MS.gene49048 | 0.877383 | 6.57E-69 | -1.69E-46 |
| MS.gene052310 | MS.gene49048 | 0.909078 | 8.47E-82 | -1.69E-46 |
| MS.gene052322 | MS.gene49048 | 0.869797 | 2.36E-66 | -1.69E-46 |
| MS.gene052326 | MS.gene49048 | 0.875088 | 4.06E-68 | -1.69E-46 |
| MS.gene052340 | MS.gene49048 | 0.855299 | 6.93E-62 | -1.69E-46 |
| MS.gene052379 | MS.gene49048 | 0.858692 | 6.92E-63 | -1.69E-46 |
| MS.gene052421 | MS.gene49048 | 0.870004 | 2.02E-66 | -1.69E-46 |
| MS.gene052481 | MS.gene49048 | 0.853388 | 2.47E-61 | -1.69E-46 |
| MS.gene052484 | MS.gene49048 | 0.853287 | 2.64E-61 | -1.69E-46 |
| MS.gene052485 | MS.gene49048 | 0.835801 | 1.36E-56 | -1.69E-46 |
| MS.gene052615 | MS.gene49048 | 0.821707 | 3.50E-53 | -1.69E-46 |
| MS.gene053009 | MS.gene49048 | 0.84688 | 1.64E-59 | -1.69E-46 |
| MS.gene053103 | MS.gene49048 | 0.894058 | 3.52E-75 | -1.69E-46 |
| MS.gene053104 | MS.gene49048 | 0.862861 | 3.75E-64 | -1.69E-46 |
| MS.gene053107 | MS.gene49048 | 0.82195 | 3.07E-53 | -1.69E-46 |
| MS.gene053207 | MS.gene49048 | 0.817045 | 4.04E-52 | -1.69E-46 |
| MS.gene053209 | MS.gene49048 | 0.862076 | 6.55E-64 | -1.69E-46 |
| MS.gene053213 | MS.gene49048 | 0.815603 | 8.49E-52 | -1.69E-46 |
| MS.gene053286 | MS.gene49048 | 0.802741 | 4.86E-49 | -1.69E-46 |
| MS.gene053322 | MS.gene49048 | 0.908616 | 1.41E-81 | -1.69E-46 |
| MS.gene053384 | MS.gene49048 | 0.804429 | 2.17E-49 | -1.69E-46 |
| MS.gene053557 | MS.gene49048 | 0.839349 | 1.67E-57 | -1.69E-46 |
| MS.gene053632 | MS.gene49048 | 0.82884 | 7.19E-55 | -1.69E-46 |
| MS.gene053813 | MS.gene49048 | 0.803209 | 3.89E-49 | -1.69E-46 |
| MS.gene053836 | MS.gene49048 | 0.820563 | 6.42E-53 | -1.69E-46 |
| MS.gene053916 | MS.gene49048 | 0.800806 | 1.21E-48 | -1.69E-46 |
| MS.gene054123 | MS.gene49048 | 0.869415 | 3.15E-66 | -1.69E-46 |
| MS.gene054376 | MS.gene49048 | 0.880596 | 4.82E-70 | -1.69E-46 |
| MS.gene05455 | MS.gene49048 | 0.827408 | 1.59E-54 | -1.69E-46 |
| MS.gene054642 | MS.gene49048 | 0.822556 | 2.22E-53 | -1.69E-46 |
| MS.gene054802 | MS.gene49048 | 0.868147 | 8.11E-66 | -1.69E-46 |
| MS.gene054803 | MS.gene49048 | 0.868953 | 4.45E-66 | -1.69E-46 |
| MS.gene054804 | MS.gene49048 | 0.872044 | 4.30E-67 | -1.69E-46 |
| MS.gene054955 | MS.gene49048 | 0.82317 | 1.60E-53 | -1.69E-46 |
| MS.gene05505 | MS.gene49048 | 0.854837 | 9.43E-62 | -1.69E-46 |
| MS.gene055116 | MS.gene49048 | 0.854605 | 1.10E-61 | -1.69E-46 |
| MS.gene055206 | MS.gene49048 | 0.81815 | 2.28E-52 | -1.69E-46 |
| MS.gene055254 | MS.gene49048 | 0.852632 | 4.06E-61 | -1.69E-46 |
| MS.gene055277 | MS.gene49048 | 0.880684 | 4.48E-70 | -1.69E-46 |
| MS.gene055390 | MS.gene49048 | 0.825189 | 5.37E-54 | -1.69E-46 |
| MS.gene055397 | MS.gene49048 | 0.87842 | 2.85E-69 | -1.69E-46 |
| MS.gene055412 | MS.gene49048 | 0.876813 | 1.04E-68 | -1.69E-46 |
| MS.gene055422 | MS.gene49048 | 0.866311 | 3.13E-65 | -1.69E-46 |
| MS.gene055428 | MS.gene49048 | 0.863006 | 3.39E-64 | -1.69E-46 |
| MS.gene055499 | MS.gene49048 | 0.865759 | 4.68E-65 | -1.69E-46 |
| MS.gene055647 | MS.gene49048 | 0.833315 | 5.72E-56 | -1.69E-46 |
| MS.gene055722 | MS.gene49048 | 0.811085 | 8.35E-51 | -1.69E-46 |
| MS.gene055896 | MS.gene49048 | 0.852085 | 5.82E-61 | -1.69E-46 |
| MS.gene05592 | MS.gene49048 | 0.850434 | 1.70E-60 | -1.69E-46 |
| MS.gene056083 | MS.gene49048 | 0.811355 | 7.30E-51 | -1.69E-46 |
| MS.gene056191 | MS.gene49048 | 0.825647 | 4.18E-54 | -1.69E-46 |
| MS.gene056374 | MS.gene49048 | 0.815009 | 1.15E-51 | -1.69E-46 |
| MS.gene056407 | MS.gene49048 | 0.846571 | 2.00E-59 | -1.69E-46 |
| MS.gene056410 | MS.gene49048 | 0.821365 | 4.20E-53 | -1.69E-46 |
| MS.gene056497 | MS.gene49048 | 0.802238 | 6.17E-49 | -1.69E-46 |
| MS.gene056511 | MS.gene49048 | 0.822947 | 1.80E-53 | -1.69E-46 |
| MS.gene056609 | MS.gene49048 | 0.870763 | 1.14E-66 | -1.69E-46 |
| MS.gene056612 | MS.gene49048 | 0.833505 | 5.13E-56 | -1.69E-46 |
| MS.gene056719 | MS.gene49048 | 0.814574 | 1.44E-51 | -1.69E-46 |
| MS.gene056796 | MS.gene49048 | 0.839392 | 1.63E-57 | -1.69E-46 |
| MS.gene056897 | MS.gene49048 | 0.855065 | 8.10E-62 | -1.69E-46 |
| MS.gene057011 | MS.gene49048 | 0.889784 | 1.78E-73 | -1.69E-46 |
| MS.gene05702 | MS.gene49048 | 0.859964 | 2.87E-63 | -1.69E-46 |
| MS.gene057123 | MS.gene49048 | 0.874045 | 9.17E-68 | -1.69E-46 |
| MS.gene057124 | MS.gene49048 | 0.83287 | 7.38E-56 | -1.69E-46 |
| MS.gene057129 | MS.gene49048 | 0.894564 | 2.19E-75 | -1.69E-46 |
| MS.gene057146 | MS.gene49048 | 0.858305 | 9.03E-63 | -1.69E-46 |
| MS.gene057207 | MS.gene49048 | 0.802823 | 4.67E-49 | -1.69E-46 |
| MS.gene057295 | MS.gene49048 | 0.873478 | 1.42E-67 | -1.69E-46 |
| MS.gene05733 | MS.gene49048 | 0.848854 | 4.70E-60 | -1.69E-46 |
| MS.gene05735 | MS.gene49048 | 0.81397 | 1.95E-51 | -1.69E-46 |
| MS.gene057416 | MS.gene49048 | 0.864162 | 1.48E-64 | -1.69E-46 |
| MS.gene057450 | MS.gene49048 | 0.8012 | 1.01E-48 | -1.69E-46 |
| MS.gene057749 | MS.gene49048 | 0.81206 | 5.13E-51 | -1.69E-46 |
| MS.gene057823 | MS.gene49048 | 0.81906 | 1.42E-52 | -1.69E-46 |
| MS.gene058002 | MS.gene49048 | 0.845076 | 5.09E-59 | -1.69E-46 |
| MS.gene058006 | MS.gene49048 | 0.812299 | 4.55E-51 | -1.69E-46 |
| MS.gene058019 | MS.gene49048 | 0.85297 | 3.25E-61 | -1.69E-46 |
| MS.gene058082 | MS.gene49048 | 0.834523 | 2.85E-56 | -1.69E-46 |
| MS.gene05811 | MS.gene49048 | 0.820255 | 7.56E-53 | -1.69E-46 |
| MS.gene058233 | MS.gene49048 | 0.871086 | 8.93E-67 | -1.69E-46 |
| MS.gene058276 | MS.gene49048 | 0.816035 | 6.80E-52 | -1.69E-46 |
| MS.gene058293 | MS.gene49048 | 0.901259 | 3.21E-78 | -1.69E-46 |
| MS.gene058323 | MS.gene49048 | 0.819613 | 1.06E-52 | -1.69E-46 |
| MS.gene058365 | MS.gene49048 | 0.844623 | 6.74E-59 | -1.69E-46 |
| MS.gene058419 | MS.gene49048 | 0.80112 | 1.05E-48 | -1.69E-46 |
| MS.gene058660 | MS.gene49048 | 0.90673 | 1.09E-80 | -1.69E-46 |
| MS.gene058787 | MS.gene49048 | 0.830633 | 2.63E-55 | -1.69E-46 |
| MS.gene058928 | MS.gene49048 | 0.860446 | 2.05E-63 | -1.69E-46 |
| MS.gene058993 | MS.gene49048 | 0.813226 | 2.85E-51 | -1.69E-46 |
| MS.gene05907 | MS.gene49048 | 0.841545 | 4.45E-58 | -1.69E-46 |
| MS.gene059141 | MS.gene49048 | 0.815001 | 1.16E-51 | -1.69E-46 |
| MS.gene059326 | MS.gene49048 | 0.847237 | 1.31E-59 | -1.69E-46 |
| MS.gene05934 | MS.gene49048 | 0.828271 | 9.86E-55 | -1.69E-46 |
| MS.gene059518 | MS.gene49048 | 0.809204 | 2.12E-50 | -1.69E-46 |
| MS.gene059536 | MS.gene49048 | 0.886876 | 2.33E-72 | -1.69E-46 |
| MS.gene059597 | MS.gene49048 | 0.905454 | 4.22E-80 | -1.69E-46 |
| MS.gene05959 | MS.gene49048 | 0.836985 | 6.79E-57 | -1.69E-46 |
| MS.gene059676 | MS.gene49048 | 0.886707 | 2.71E-72 | -1.69E-46 |
| MS.gene059688 | MS.gene49048 | 0.900714 | 5.55E-78 | -1.69E-46 |
| MS.gene059692 | MS.gene49048 | 0.907525 | 4.61E-81 | -1.69E-46 |
| MS.gene059695 | MS.gene49048 | 0.909724 | 4.15E-82 | -1.69E-46 |
| MS.gene059708 | MS.gene49048 | 0.81952 | 1.11E-52 | -1.69E-46 |
| MS.gene059711 | MS.gene49048 | 0.824175 | 9.31E-54 | -1.69E-46 |
| MS.gene059718 | MS.gene49048 | 0.800943 | 1.14E-48 | -1.69E-46 |
| MS.gene05984 | MS.gene49048 | 0.81774 | 2.82E-52 | -1.69E-46 |
| MS.gene059894 | MS.gene49048 | 0.868462 | 6.42E-66 | -1.69E-46 |
| MS.gene059960 | MS.gene49048 | 0.900838 | 4.91E-78 | -1.69E-46 |
| MS.gene06037 | MS.gene49048 | 0.817331 | 3.49E-52 | -1.69E-46 |
| MS.gene060403 | MS.gene49048 | 0.841438 | 4.75E-58 | -1.69E-46 |
| MS.gene060407 | MS.gene49048 | 0.833719 | 4.54E-56 | -1.69E-46 |
| MS.gene060804 | MS.gene49048 | 0.875673 | 2.56E-68 | -1.69E-46 |
| MS.gene060818 | MS.gene49048 | 0.8642 | 1.44E-64 | -1.69E-46 |
| MS.gene060837 | MS.gene49048 | 0.820298 | 7.39E-53 | -1.69E-46 |
| MS.gene06090 | MS.gene49048 | 0.808442 | 3.09E-50 | -1.69E-46 |
| MS.gene06092 | MS.gene49048 | 0.824441 | 8.06E-54 | -1.69E-46 |
| MS.gene061041 | MS.gene49048 | 0.867076 | 1.79E-65 | -1.69E-46 |
| MS.gene061049 | MS.gene49048 | 0.877606 | 5.49E-69 | -1.69E-46 |
| MS.gene061051 | MS.gene49048 | -0.853123 | 2.94E-61 | -1.69E-46 |
| MS.gene061150 | MS.gene49048 | 0.823869 | 1.10E-53 | -1.69E-46 |
| MS.gene061200 | MS.gene49048 | 0.883935 | 2.94E-71 | -1.69E-46 |
PPI:
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene49048.t1 | MTR_1g101400 | 91.438 | 292 | 3 | 1 | 1 | 270 | 1 | 292 | 0.0 | 533 |
| MS.gene49048.t1 | MTR_2g021790 | 54.412 | 68 | 26 | 2 | 21 | 86 | 1 | 65 | 1.41e-12 | 62.0 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene49048.t1 | AT5G52100 | 71.528 | 288 | 64 | 2 | 1 | 270 | 1 | 288 | 5.56e-146 | 411 |
Find 66 sgRNAs with CRISPR-Local
Find 146 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| AAATGACCTTACTATGGTTT+TGG | 0.191058 | 1.3:-69881362 | MS.gene49048:CDS |
| GTGGAACAGGTTGTAATAAA+TGG | 0.207909 | 1.3:-69881767 | MS.gene49048:intron |
| AAAGGCAAGGGGTCAAGTTT+TGG | 0.246017 | 1.3:-69880001 | MS.gene49048:intron |
| TAGAGAGATTGTTGGCAATT+TGG | 0.249550 | 1.3:+69880170 | None:intergenic |
| TTGAGAATTCAAGTAGTTGA+TGG | 0.320100 | 1.3:+69881948 | None:intergenic |
| CAATTTCGACATTGCGGTAA+TGG | 0.331384 | 1.3:+69880460 | None:intergenic |
| AATGGAGCAGCAAAGGAAAT+AGG | 0.336907 | 1.3:-69881749 | MS.gene49048:CDS |
| TATACTAAATGACCTTACTA+TGG | 0.353599 | 1.3:-69881368 | MS.gene49048:CDS |
| CAACATGTTGGGGAAGATAT+TGG | 0.357960 | 1.3:-69881662 | MS.gene49048:CDS |
| GACTACAACCGCTGTGGCCT+TGG | 0.364137 | 1.3:+69881220 | None:intergenic |
| ACTGTATAGGCAACAGCATT+TGG | 0.373770 | 1.3:-69880827 | MS.gene49048:intron |
| GTTGGCAATTTGGTTTGCTT+CGG | 0.404040 | 1.3:+69880180 | None:intergenic |
| TGGAATTCGCGTGCACAGTT+TGG | 0.408268 | 1.3:-69879974 | MS.gene49048:CDS |
| CTATTGATACTCAACATGTT+GGG | 0.408524 | 1.3:-69881673 | MS.gene49048:CDS |
| CTGCAACAATATTGATCCTA+TGG | 0.409023 | 1.3:+69880506 | None:intergenic |
| AGTAGTTGATGGAATGAAAC+TGG | 0.415845 | 1.3:+69881959 | None:intergenic |
| ATCTGTGATATCATGCTTGA+TGG | 0.417837 | 1.3:+69879637 | None:intergenic |
| GCCAGAGGAATGGAAGTTGC+TGG | 0.433583 | 1.3:-69881698 | MS.gene49048:CDS |
| TCACCCCTTGCTCACCATGC+TGG | 0.433731 | 1.3:+69880730 | None:intergenic |
| GGTATATGACAATGTAAAAC+AGG | 0.437708 | 1.3:-69881177 | MS.gene49048:intron |
| TCCAGCAACTTCCATTCCTC+TGG | 0.450267 | 1.3:+69881697 | None:intergenic |
| TCTTACATTTGCATTAGCCT+TGG | 0.452314 | 1.3:+69880431 | None:intergenic |
| CAACTACTTGAATTCTCAAA+TGG | 0.460268 | 1.3:-69881944 | MS.gene49048:intron |
| ATTTGGTTTGCTTCGGCCGA+TGG | 0.481953 | 1.3:+69880187 | None:intergenic |
| ACCGAGGTTAGAGAGATTGT+TGG | 0.485133 | 1.3:+69880162 | None:intergenic |
| GCTATTGATACTCAACATGT+TGG | 0.498878 | 1.3:-69881674 | MS.gene49048:CDS |
| ACCGTATCTAATTTGATTCG+CGG | 0.502405 | 1.3:+69880782 | None:intergenic |
| GGAATGAAACTGGCAGCTTA+AGG | 0.502410 | 1.3:+69881969 | None:intergenic |
| AGACTCCTCAACAGATGTCT+TGG | 0.508028 | 1.3:-69880122 | MS.gene49048:intron |
| GTTGCTCCAACGCTTTCCAT+AGG | 0.508224 | 1.3:-69880522 | MS.gene49048:CDS |
| TAGAACCCAAAACCATAGTA+AGG | 0.510640 | 1.3:+69881356 | None:intergenic |
| ACTATAATGACAGGGTGTCT+TGG | 0.515706 | 1.3:-69880544 | MS.gene49048:intron |
| ATAGTAAGGTCATTTAGTAT+AGG | 0.525371 | 1.3:+69881370 | None:intergenic |
| TTTCCTATAGCTTTGTGGCA+TGG | 0.525843 | 1.3:-69881410 | MS.gene49048:intron |
| AGGATCAATATTGTTGCAGC+AGG | 0.526093 | 1.3:-69880502 | MS.gene49048:CDS |
| TGTAATAAATGGAGCAGCAA+AGG | 0.530888 | 1.3:-69881756 | MS.gene49048:CDS |
| GCCAACAATCTCTCTAACCT+CGG | 0.544225 | 1.3:-69880163 | MS.gene49048:CDS |
| CTAATGGCTATCAACAAGCC+TGG | 0.546599 | 1.3:+69879599 | None:intergenic |
| ACATTGTCATATACCGCGGA+AGG | 0.549371 | 1.3:+69881185 | None:intergenic |
| AGCAGTATTAGCTGTGACAA+AGG | 0.549949 | 1.3:-69881720 | MS.gene49048:CDS |
| TGTTGGGGAAGATATTGGAC+AGG | 0.558324 | 1.3:-69881657 | MS.gene49048:intron |
| TTACCGCAATGTCGAAATTG+TGG | 0.563978 | 1.3:-69880457 | MS.gene49048:CDS |
| TGTTATACAGGATCTTCCAT+CGG | 0.565260 | 1.3:-69880203 | MS.gene49048:intron |
| TGTCGAAATTGTGGAATCCA+AGG | 0.571619 | 1.3:-69880448 | MS.gene49048:CDS |
| ATTGATCCTATGGAAAGCGT+TGG | 0.571844 | 1.3:+69880516 | None:intergenic |
| GATGTACAATGTCTTATGCC+AGG | 0.572407 | 1.3:-69879617 | MS.gene49048:CDS |
| AAGTGAACTGTTGTACTAGA+GGG | 0.580769 | 1.3:+69879937 | None:intergenic |
| AAAGTGAACTGTTGTACTAG+AGG | 0.590884 | 1.3:+69879936 | None:intergenic |
| TGTGACAAAGGCCAGAGGAA+TGG | 0.593244 | 1.3:-69881708 | MS.gene49048:CDS |
| GTTGTACTAGAGGGAAGCCC+TGG | 0.594961 | 1.3:+69879946 | None:intergenic |
| GCCGCGAATCAAATTAGATA+CGG | 0.602862 | 1.3:-69880783 | MS.gene49048:CDS |
| TATTGATACTCAACATGTTG+GGG | 0.603145 | 1.3:-69881672 | MS.gene49048:CDS |
| TTTAGTATAGGTATTTCAAG+AGG | 0.603621 | 1.3:+69881382 | None:intergenic |
| CGATTTCACTGACCCTTCCG+CGG | 0.603993 | 1.3:-69881198 | MS.gene49048:CDS |
| ATTATCAGCATTCTGTGAGA+AGG | 0.611346 | 1.3:-69880753 | MS.gene49048:CDS |
| TAGAAAAGTAGTGCGCCTCA+AGG | 0.613059 | 1.3:-69879579 | MS.gene49048:CDS |
| CATTGTCATATACCGCGGAA+GGG | 0.627711 | 1.3:+69881186 | None:intergenic |
| CAAATAATTAAGGTACCTTG+AGG | 0.628224 | 1.3:+69879564 | None:intergenic |
| ATTCTGTGAGAAGGCCAGCA+TGG | 0.629094 | 1.3:-69880744 | MS.gene49048:intron |
| CCTTACCAAGACATCTGTTG+AGG | 0.630824 | 1.3:+69880117 | None:intergenic |
| ATTCCACAATTTCGACATTG+CGG | 0.643338 | 1.3:+69880454 | None:intergenic |
| CTCTGTTATAGATTTGACCG+AGG | 0.649127 | 1.3:+69880146 | None:intergenic |
| TATCACACGACAAAGGCAAG+GGG | 0.699381 | 1.3:-69880012 | MS.gene49048:intron |
| TTTGCAGTCCAAGGCCACAG+CGG | 0.733235 | 1.3:-69881228 | MS.gene49048:intron |
| TTAGCTGTGACAAAGGCCAG+AGG | 0.735270 | 1.3:-69881713 | MS.gene49048:CDS |
| GAAATCGACTACAACCGCTG+TGG | 0.746133 | 1.3:+69881214 | None:intergenic |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !!! | TTTAAAATTTAGTCAATTTA+AGG | - | chr1.3:69881836-69881855 | MS.gene49048:intron | 10.0% |
| !! | CTATAGGAAAATAAAAAATT+AGG | + | chr1.3:69880127-69880146 | None:intergenic | 15.0% |
| !! | TTATATAAGCACTTAATTAA+CGG | - | chr1.3:69880099-69880118 | MS.gene49048:intron | 15.0% |
| !! | AAGACTGATAGTTTATTTAT+TGG | - | chr1.3:69880478-69880497 | MS.gene49048:CDS | 20.0% |
| !! | AAGATGAAGTGTAAATTAAA+TGG | - | chr1.3:69880446-69880465 | MS.gene49048:CDS | 20.0% |
| !! | AGACTGATAGTTTATTTATT+GGG | - | chr1.3:69880479-69880498 | MS.gene49048:CDS | 20.0% |
| !! | TATATAAGCACTTAATTAAC+GGG | - | chr1.3:69880100-69880119 | MS.gene49048:intron | 20.0% |
| !! | TTATGGTAAAATCTATTTAG+AGG | - | chr1.3:69881181-69881200 | MS.gene49048:CDS | 20.0% |
| !!! | CAAAGTGTTAATTTTGAAAA+TGG | + | chr1.3:69879709-69879728 | None:intergenic | 20.0% |
| !!! | TAAATAGATTTTACCATAAG+TGG | + | chr1.3:69881180-69881199 | None:intergenic | 20.0% |
| !!! | TGTTATAAGTTGTTTTCATA+AGG | + | chr1.3:69880000-69880019 | None:intergenic | 20.0% |
| !!! | TTATATTTTCGTGAGTAAAT+TGG | + | chr1.3:69881693-69881712 | None:intergenic | 20.0% |
| !!! | TTCATCTTAAATGCATATTT+TGG | + | chr1.3:69880434-69880453 | None:intergenic | 20.0% |
| ! | AAACTCATAATTGTAGCATT+AGG | - | chr1.3:69880656-69880675 | MS.gene49048:intron | 25.0% |
| ! | AAATGCCAAAAAAGAACAAA+TGG | + | chr1.3:69880978-69880997 | None:intergenic | 25.0% |
| ! | AATTATTTATCACACGACAA+AGG | - | chr1.3:69881528-69881547 | MS.gene49048:intron | 25.0% |
| ! | ACCTATACAAAGCAATATAA+AGG | - | chr1.3:69879669-69879688 | MS.gene49048:intron | 25.0% |
| ! | AGTGTAAATTAAATGGTTCT+TGG | - | chr1.3:69880453-69880472 | MS.gene49048:CDS | 25.0% |
| ! | ATAGTAAGGTCATTTAGTAT+AGG | + | chr1.3:69880180-69880199 | None:intergenic | 25.0% |
| ! | ATATAAGCACTTAATTAACG+GGG | - | chr1.3:69880101-69880120 | MS.gene49048:intron | 25.0% |
| ! | ATTTGGTTAACTATAATGAC+AGG | - | chr1.3:69880994-69881013 | MS.gene49048:intron | 25.0% |
| ! | CGAACATACTTATATATTGT+TGG | - | chr1.3:69880408-69880427 | MS.gene49048:intron | 25.0% |
| ! | TAAAGTAGGAAATAACTGAA+AGG | + | chr1.3:69880917-69880936 | None:intergenic | 25.0% |
| ! | TATACTAAATGACCTTACTA+TGG | - | chr1.3:69880179-69880198 | MS.gene49048:CDS | 25.0% |
| ! | TGAATTAGCAATAACAAACT+TGG | - | chr1.3:69880236-69880255 | MS.gene49048:intron | 25.0% |
| ! | TTATGTTCAATATCCACTTA+TGG | - | chr1.3:69881164-69881183 | MS.gene49048:intron | 25.0% |
| ! | TTTAGTATAGGTATTTCAAG+AGG | + | chr1.3:69880168-69880187 | None:intergenic | 25.0% |
| ! | TTTGGTTAACTATAATGACA+GGG | - | chr1.3:69880995-69881014 | MS.gene49048:intron | 25.0% |
| !! | AAGTCTGTTTTGTATAAAGT+AGG | + | chr1.3:69880931-69880950 | None:intergenic | 25.0% |
| !! | ATTTCAAGTGATAGGATAAT+AGG | - | chr1.3:69880605-69880624 | MS.gene49048:intron | 25.0% |
| !! | TTTTCATACTTCATAGCTAA+AGG | - | chr1.3:69880577-69880596 | MS.gene49048:intron | 25.0% |
| !!! | ATTTGTTCTTTTTTGGCATT+TGG | - | chr1.3:69880977-69880996 | MS.gene49048:intron | 25.0% |
| !!! | CTAAACCATTTGTTCTTTTT+TGG | - | chr1.3:69880970-69880989 | MS.gene49048:intron | 25.0% |
| !!! | TTGATTCTTTTTCACTGTAT+AGG | - | chr1.3:69880707-69880726 | MS.gene49048:intron | 25.0% |
| !!! | TTTATTTTCCTATAGCTTTG+TGG | - | chr1.3:69880132-69880151 | MS.gene49048:CDS | 25.0% |
| !!! | TTTTTGTTTAAGACAGCTTA+TGG | - | chr1.3:69879913-69879932 | MS.gene49048:intron | 25.0% |
| AAGAGCTTCTTCAGTATATT+TGG | + | chr1.3:69881325-69881344 | None:intergenic | 30.0% | |
| AATGAGAAGATAGTACACTT+TGG | + | chr1.3:69881864-69881883 | None:intergenic | 30.0% | |
| AATGAGCTGAAAACAACTTA+TGG | + | chr1.3:69879957-69879976 | None:intergenic | 30.0% | |
| AGAATAAAATGTGTTCACCA+AGG | + | chr1.3:69881658-69881677 | None:intergenic | 30.0% | |
| AGATTGAAGAGTAGATTATG+TGG | - | chr1.3:69880631-69880650 | MS.gene49048:intron | 30.0% | |
| CAACTACTTGAATTCTCAAA+TGG | - | chr1.3:69879603-69879622 | MS.gene49048:CDS | 30.0% | |
| CATAATCTACTCTTCAATCT+TGG | + | chr1.3:69880631-69880650 | None:intergenic | 30.0% | |
| CTATTGATACTCAACATGTT+GGG | - | chr1.3:69879874-69879893 | MS.gene49048:intron | 30.0% | |
| GAAATAACTGAAAGGACAAA+AGG | + | chr1.3:69880909-69880928 | None:intergenic | 30.0% | |
| GCCTTTATATTGCTTTGTAT+AGG | + | chr1.3:69879673-69879692 | None:intergenic | 30.0% | |
| GGTATATGACAATGTAAAAC+AGG | - | chr1.3:69880370-69880389 | MS.gene49048:intron | 30.0% | |
| GTGGATATTGAACATAAACA+AGG | + | chr1.3:69881161-69881180 | None:intergenic | 30.0% | |
| TATTGATACTCAACATGTTG+GGG | - | chr1.3:69879875-69879894 | MS.gene49048:intron | 30.0% | |
| TGTACTATCTTCTCATTATG+AGG | - | chr1.3:69881867-69881886 | MS.gene49048:intron | 30.0% | |
| TTAGTAGTAGCAGATTTAGT+CGG | + | chr1.3:69880954-69880973 | None:intergenic | 30.0% | |
| TTGAGAATTCAAGTAGTTGA+TGG | + | chr1.3:69879602-69879621 | None:intergenic | 30.0% | |
| ! | AAATGACCTTACTATGGTTT+TGG | - | chr1.3:69880185-69880204 | MS.gene49048:CDS | 30.0% |
| ! | AATGACCTTACTATGGTTTT+GGG | - | chr1.3:69880186-69880205 | MS.gene49048:CDS | 30.0% |
| ! | AGGAAACAATTTCAAGTGAT+AGG | - | chr1.3:69880597-69880616 | MS.gene49048:intron | 30.0% |
| ! | TTTAAGACAGCTTATGGAAA+TGG | - | chr1.3:69879919-69879938 | MS.gene49048:intron | 30.0% |
| ! | TTTTACATTGTCATATACCG+CGG | + | chr1.3:69880369-69880388 | None:intergenic | 30.0% |
| AAAGTGAACTGTTGTACTAG+AGG | + | chr1.3:69881614-69881633 | None:intergenic | 35.0% | |
| AAGTGAACTGTTGTACTAGA+GGG | + | chr1.3:69881613-69881632 | None:intergenic | 35.0% | |
| ATCTGTGATATCATGCTTGA+TGG | + | chr1.3:69881913-69881932 | None:intergenic | 35.0% | |
| ATTACAACCTGTTCCACAAA+GGG | + | chr1.3:69879777-69879796 | None:intergenic | 35.0% | |
| ATTATCAGCATTCTGTGAGA+AGG | - | chr1.3:69880794-69880813 | MS.gene49048:CDS | 35.0% | |
| ATTCCACAATTTCGACATTG+CGG | + | chr1.3:69881096-69881115 | None:intergenic | 35.0% | |
| CTGCAACAATATTGATCCTA+TGG | + | chr1.3:69881044-69881063 | None:intergenic | 35.0% | |
| GCTATTGATACTCAACATGT+TGG | - | chr1.3:69879873-69879892 | MS.gene49048:intron | 35.0% | |
| GTGGAACAGGTTGTAATAAA+TGG | - | chr1.3:69879780-69879799 | MS.gene49048:intron | 35.0% | |
| GTTAAGCTAACTTAACTGAC+TGG | - | chr1.3:69881226-69881245 | MS.gene49048:intron | 35.0% | |
| TAGAACCCAAAACCATAGTA+AGG | + | chr1.3:69880194-69880213 | None:intergenic | 35.0% | |
| TAGAGAGATTGTTGGCAATT+TGG | + | chr1.3:69881380-69881399 | None:intergenic | 35.0% | |
| TATTACAACCTGTTCCACAA+AGG | + | chr1.3:69879778-69879797 | None:intergenic | 35.0% | |
| TGTAATAAATGGAGCAGCAA+AGG | - | chr1.3:69879791-69879810 | MS.gene49048:intron | 35.0% | |
| TGTTATACAGGATCTTCCAT+CGG | - | chr1.3:69881344-69881363 | MS.gene49048:intron | 35.0% | |
| ! | ACCGTATCTAATTTGATTCG+CGG | + | chr1.3:69880768-69880787 | None:intergenic | 35.0% |
| ! | TCAATTTTCAACACCCTTTG+TGG | - | chr1.3:69879761-69879780 | MS.gene49048:intron | 35.0% |
| ! | TCTTACATTTGCATTAGCCT+TGG | + | chr1.3:69881119-69881138 | None:intergenic | 35.0% |
| ! | TGAAGAAGCTCTTGTTATAC+AGG | - | chr1.3:69881332-69881351 | MS.gene49048:intron | 35.0% |
| ! | TGTAAAACAGGTTTGAGTTC+TGG | - | chr1.3:69880382-69880401 | MS.gene49048:intron | 35.0% |
| !! | AGTACAACAGTTCACTTTTC+TGG | - | chr1.3:69881616-69881635 | MS.gene49048:intron | 35.0% |
| !! | AGTAGTTGATGGAATGAAAC+TGG | + | chr1.3:69879591-69879610 | None:intergenic | 35.0% |
| !! | AGTTGTTTTCATAAGGCTAG+AGG | + | chr1.3:69880043-69880062 | None:intergenic | 35.0% |
| AATGGAGCAGCAAAGGAAAT+AGG | - | chr1.3:69879798-69879817 | MS.gene49048:intron | 40.0% | |
| ACTGTATAGGCAACAGCATT+TGG | - | chr1.3:69880720-69880739 | MS.gene49048:intron | 40.0% | |
| AGCAGTATTAGCTGTGACAA+AGG | - | chr1.3:69879827-69879846 | MS.gene49048:intron | 40.0% | |
| AGGATCAATATTGTTGCAGC+AGG | - | chr1.3:69881045-69881064 | MS.gene49048:intron | 40.0% | |
| CAACATGTTGGGGAAGATAT+TGG | - | chr1.3:69879885-69879904 | MS.gene49048:intron | 40.0% | |
| CAATTTCGACATTGCGGTAA+TGG | + | chr1.3:69881090-69881109 | None:intergenic | 40.0% | |
| CTCTGTTATAGATTTGACCG+AGG | + | chr1.3:69881404-69881423 | None:intergenic | 40.0% | |
| GAATTGCAATTTGCAGTCCA+AGG | - | chr1.3:69880310-69880329 | MS.gene49048:intron | 40.0% | |
| GATGTACAATGTCTTATGCC+AGG | - | chr1.3:69881930-69881949 | MS.gene49048:intron | 40.0% | |
| GCCGCGAATCAAATTAGATA+CGG | - | chr1.3:69880764-69880783 | MS.gene49048:CDS | 40.0% | |
| TCTTCATTCCCAAACGAAGA+CGG | - | chr1.3:69881276-69881295 | MS.gene49048:intron | 40.0% | |
| TGTCGAAATTGTGGAATCCA+AGG | - | chr1.3:69881099-69881118 | MS.gene49048:intron | 40.0% | |
| TTACCGCAATGTCGAAATTG+TGG | - | chr1.3:69881090-69881109 | MS.gene49048:intron | 40.0% | |
| TTATCACACGACAAAGGCAA+GGG | - | chr1.3:69881534-69881553 | MS.gene49048:intron | 40.0% | |
| TTTATCACACGACAAAGGCA+AGG | - | chr1.3:69881533-69881552 | MS.gene49048:intron | 40.0% | |
| TTTCGATAAGCTTTCCACGA+TGG | - | chr1.3:69879975-69879994 | MS.gene49048:CDS | 40.0% | |
| ! | ACTATAATGACAGGGTGTCT+TGG | - | chr1.3:69881003-69881022 | MS.gene49048:intron | 40.0% |
| ! | ATTGATCCTATGGAAAGCGT+TGG | + | chr1.3:69881034-69881053 | None:intergenic | 40.0% |
| !! | ACAGTTCACTTTTCTGGTCT+TGG | - | chr1.3:69881622-69881641 | MS.gene49048:intron | 40.0% |
| !! | GTTGGCAATTTGGTTTGCTT+CGG | + | chr1.3:69881370-69881389 | None:intergenic | 40.0% |
| !! | GTTGTTTTCATAAGCCATCG+TGG | + | chr1.3:69879992-69880011 | None:intergenic | 40.0% |
| !! | TTTCCTATAGCTTTGTGGCA+TGG | - | chr1.3:69880137-69880156 | MS.gene49048:CDS | 40.0% |
| !!! | GGTTTTGGGTTCTATATCTC+AGG | - | chr1.3:69880200-69880219 | MS.gene49048:intron | 40.0% |
| !!! | TGCACAGTTTGGTTTTACCA+GGG | - | chr1.3:69881584-69881603 | MS.gene49048:intron | 40.0% |
| ACATTGTCATATACCGCGGA+AGG | + | chr1.3:69880365-69880384 | None:intergenic | 45.0% | |
| ACCGAGGTTAGAGAGATTGT+TGG | + | chr1.3:69881388-69881407 | None:intergenic | 45.0% | |
| ACCTTTCTCCGTCTTCGTTT+GGG | + | chr1.3:69881287-69881306 | None:intergenic | 45.0% | |
| AGACTCCTCAACAGATGTCT+TGG | - | chr1.3:69881425-69881444 | MS.gene49048:intron | 45.0% | |
| CATTGTCATATACCGCGGAA+GGG | + | chr1.3:69880364-69880383 | None:intergenic | 45.0% | |
| CCTCAACAGATGTCTTGGTA+AGG | - | chr1.3:69881430-69881449 | MS.gene49048:intron | 45.0% | |
| CCTTACCAAGACATCTGTTG+AGG | + | chr1.3:69881433-69881452 | None:intergenic | 45.0% | |
| CTAATGGCTATCAACAAGCC+TGG | + | chr1.3:69881951-69881970 | None:intergenic | 45.0% | |
| CTTCCATGCCACAAAGCTAT+AGG | + | chr1.3:69880143-69880162 | None:intergenic | 45.0% | |
| GCCAACAATCTCTCTAACCT+CGG | - | chr1.3:69881384-69881403 | MS.gene49048:CDS | 45.0% | |
| GGAATGAAACTGGCAGCTTA+AGG | + | chr1.3:69879581-69879600 | None:intergenic | 45.0% | |
| TAGAAAAGTAGTGCGCCTCA+AGG | - | chr1.3:69881968-69881987 | MS.gene49048:CDS | 45.0% | |
| TATCACACGACAAAGGCAAG+GGG | - | chr1.3:69881535-69881554 | MS.gene49048:intron | 45.0% | |
| TGTTGGGGAAGATATTGGAC+AGG | - | chr1.3:69879890-69879909 | MS.gene49048:intron | 45.0% | |
| TTCAACACCCTTTGTGGAAC+AGG | - | chr1.3:69879767-69879786 | MS.gene49048:intron | 45.0% | |
| TTGTATAGGTTGTGCTGAGC+AGG | + | chr1.3:69879659-69879678 | None:intergenic | 45.0% | |
| ! | AAAGGCAAGGGGTCAAGTTT+TGG | - | chr1.3:69881546-69881565 | MS.gene49048:intron | 45.0% |
| ! | AAGGCAAGGGGTCAAGTTTT+GGG | - | chr1.3:69881547-69881566 | MS.gene49048:intron | 45.0% |
| !! | GAGGCGCACTACTTTTCTAA+TGG | + | chr1.3:69881967-69881986 | None:intergenic | 45.0% |
| !!! | GTGCACAGTTTGGTTTTACC+AGG | - | chr1.3:69881583-69881602 | MS.gene49048:intron | 45.0% |
| !!! | TCACTTTTCTGGTCTTGGAG+AGG | - | chr1.3:69881627-69881646 | MS.gene49048:intron | 45.0% |
| ATTCTGTGAGAAGGCCAGCA+TGG | - | chr1.3:69880803-69880822 | MS.gene49048:CDS | 50.0% | |
| GAAATCGACTACAACCGCTG+TGG | + | chr1.3:69880336-69880355 | None:intergenic | 50.0% | |
| GACCTTTCTCCGTCTTCGTT+TGG | + | chr1.3:69881288-69881307 | None:intergenic | 50.0% | |
| GTTGCTCCAACGCTTTCCAT+AGG | - | chr1.3:69881025-69881044 | MS.gene49048:intron | 50.0% | |
| TCCAGCAACTTCCATTCCTC+TGG | + | chr1.3:69879853-69879872 | None:intergenic | 50.0% | |
| TCCCAAACGAAGACGGAGAA+AGG | - | chr1.3:69881283-69881302 | MS.gene49048:intron | 50.0% | |
| TGGAATTCGCGTGCACAGTT+TGG | - | chr1.3:69881573-69881592 | MS.gene49048:intron | 50.0% | |
| TGTGACAAAGGCCAGAGGAA+TGG | - | chr1.3:69879839-69879858 | MS.gene49048:intron | 50.0% | |
| TTAGCTGTGACAAAGGCCAG+AGG | - | chr1.3:69879834-69879853 | MS.gene49048:intron | 50.0% | |
| ! | GTCTTGGAGAGGTATGTCCT+TGG | - | chr1.3:69881638-69881657 | MS.gene49048:intron | 50.0% |
| !! | ATTTGGTTTGCTTCGGCCGA+TGG | + | chr1.3:69881363-69881382 | None:intergenic | 50.0% |
| !!! | AGGGGTCAAGTTTTGGGAGA+TGG | - | chr1.3:69881553-69881572 | MS.gene49048:intron | 50.0% |
| AAGGCCAGCATGGTGAGCAA+GGG | - | chr1.3:69880813-69880832 | MS.gene49048:CDS | 55.0% | |
| CGATTTCACTGACCCTTCCG+CGG | - | chr1.3:69880349-69880368 | MS.gene49048:intron | 55.0% | |
| GCCAGAGGAATGGAAGTTGC+TGG | - | chr1.3:69879849-69879868 | MS.gene49048:intron | 55.0% | |
| GTTGTACTAGAGGGAAGCCC+TGG | + | chr1.3:69881604-69881623 | None:intergenic | 55.0% | |
| TTTGCAGTCCAAGGCCACAG+CGG | - | chr1.3:69880319-69880338 | MS.gene49048:intron | 55.0% | |
| AGGCCAGCATGGTGAGCAAG+GGG | - | chr1.3:69880814-69880833 | MS.gene49048:CDS | 60.0% | |
| GAAGGCCAGCATGGTGAGCA+AGG | - | chr1.3:69880812-69880831 | MS.gene49048:CDS | 60.0% | |
| GACTACAACCGCTGTGGCCT+TGG | + | chr1.3:69880330-69880349 | None:intergenic | 60.0% | |
| TCACCCCTTGCTCACCATGC+TGG | + | chr1.3:69880820-69880839 | None:intergenic | 60.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr1.3 | gene | 69879571 | 69881998 | 69879571 | ID=MS.gene49048 |
| chr1.3 | mRNA | 69879571 | 69881998 | 69879571 | ID=MS.gene49048.t1;Parent=MS.gene49048 |
| chr1.3 | exon | 69881945 | 69881998 | 69881945 | ID=MS.gene49048.t1.exon1;Parent=MS.gene49048.t1 |
| chr1.3 | CDS | 69881945 | 69881998 | 69881945 | ID=cds.MS.gene49048.t1;Parent=MS.gene49048.t1 |
| chr1.3 | exon | 69881658 | 69881780 | 69881658 | ID=MS.gene49048.t1.exon2;Parent=MS.gene49048.t1 |
| chr1.3 | CDS | 69881658 | 69881780 | 69881658 | ID=cds.MS.gene49048.t1;Parent=MS.gene49048.t1 |
| chr1.3 | exon | 69881348 | 69881422 | 69881348 | ID=MS.gene49048.t1.exon3;Parent=MS.gene49048.t1 |
| chr1.3 | CDS | 69881348 | 69881422 | 69881348 | ID=cds.MS.gene49048.t1;Parent=MS.gene49048.t1 |
| chr1.3 | exon | 69881178 | 69881243 | 69881178 | ID=MS.gene49048.t1.exon4;Parent=MS.gene49048.t1 |
| chr1.3 | CDS | 69881178 | 69881243 | 69881178 | ID=cds.MS.gene49048.t1;Parent=MS.gene49048.t1 |
| chr1.3 | exon | 69880745 | 69880840 | 69880745 | ID=MS.gene49048.t1.exon5;Parent=MS.gene49048.t1 |
| chr1.3 | CDS | 69880745 | 69880840 | 69880745 | ID=cds.MS.gene49048.t1;Parent=MS.gene49048.t1 |
| chr1.3 | exon | 69880437 | 69880553 | 69880437 | ID=MS.gene49048.t1.exon6;Parent=MS.gene49048.t1 |
| chr1.3 | CDS | 69880437 | 69880553 | 69880437 | ID=cds.MS.gene49048.t1;Parent=MS.gene49048.t1 |
| chr1.3 | exon | 69880123 | 69880215 | 69880123 | ID=MS.gene49048.t1.exon7;Parent=MS.gene49048.t1 |
| chr1.3 | CDS | 69880123 | 69880215 | 69880123 | ID=cds.MS.gene49048.t1;Parent=MS.gene49048.t1 |
| chr1.3 | exon | 69879921 | 69880019 | 69879921 | ID=MS.gene49048.t1.exon8;Parent=MS.gene49048.t1 |
| chr1.3 | CDS | 69879921 | 69880019 | 69879921 | ID=cds.MS.gene49048.t1;Parent=MS.gene49048.t1 |
| chr1.3 | exon | 69879571 | 69879666 | 69879571 | ID=MS.gene49048.t1.exon9;Parent=MS.gene49048.t1 |
| chr1.3 | CDS | 69879571 | 69879666 | 69879571 | ID=cds.MS.gene49048.t1;Parent=MS.gene49048.t1 |
| Gene Sequence |
| Protein sequence |
