Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene34845.t1 | XP_013442452.1 | 95.9 | 508 | 17 | 3 | 1 | 508 | 1 | 504 | 2.70E-263 | 917.5 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene34845.t1 | O24629 | 67.7 | 514 | 148 | 6 | 1 | 508 | 1 | 502 | 1.1e-180 | 634.4 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene34845.t1 | A0A072TGI9 | 95.9 | 508 | 17 | 3 | 1 | 508 | 1 | 504 | 1.9e-263 | 917.5 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| MS.gene049150 | MS.gene34845 | 0.841199 | 5.49E-58 | -1.69E-46 |
| MS.gene049153 | MS.gene34845 | 0.842233 | 2.93E-58 | -1.69E-46 |
| MS.gene049170 | MS.gene34845 | 0.807933 | 3.97E-50 | -1.69E-46 |
| MS.gene049346 | MS.gene34845 | 0.818377 | 2.02E-52 | -1.69E-46 |
| MS.gene049356 | MS.gene34845 | 0.851533 | 8.34E-61 | -1.69E-46 |
| MS.gene049369 | MS.gene34845 | 0.803395 | 3.56E-49 | -1.69E-46 |
| MS.gene049661 | MS.gene34845 | 0.827836 | 1.26E-54 | -1.69E-46 |
| MS.gene049662 | MS.gene34845 | 0.830079 | 3.59E-55 | -1.69E-46 |
| MS.gene049758 | MS.gene34845 | 0.839082 | 1.96E-57 | -1.69E-46 |
| MS.gene049910 | MS.gene34845 | 0.8209 | 5.37E-53 | -1.69E-46 |
| MS.gene049993 | MS.gene34845 | 0.804363 | 2.24E-49 | -1.69E-46 |
| MS.gene050128 | MS.gene34845 | 0.816135 | 6.46E-52 | -1.69E-46 |
| MS.gene050301 | MS.gene34845 | 0.844438 | 7.56E-59 | -1.69E-46 |
| MS.gene050397 | MS.gene34845 | 0.838683 | 2.49E-57 | -1.69E-46 |
| MS.gene050406 | MS.gene34845 | 0.816431 | 5.55E-52 | -1.69E-46 |
| MS.gene050426 | MS.gene34845 | -0.844515 | 7.21E-59 | -1.69E-46 |
| MS.gene050432 | MS.gene34845 | 0.828408 | 9.14E-55 | -1.69E-46 |
| MS.gene050464 | MS.gene34845 | 0.852045 | 5.97E-61 | -1.69E-46 |
| MS.gene050529 | MS.gene34845 | 0.858449 | 8.17E-63 | -1.69E-46 |
| MS.gene050593 | MS.gene34845 | 0.806406 | 8.35E-50 | -1.69E-46 |
| MS.gene050670 | MS.gene34845 | 0.898079 | 7.54E-77 | -1.69E-46 |
| MS.gene050971 | MS.gene34845 | 0.816891 | 4.38E-52 | -1.69E-46 |
| MS.gene05105 | MS.gene34845 | 0.869751 | 2.45E-66 | -1.69E-46 |
| MS.gene051387 | MS.gene34845 | 0.819521 | 1.11E-52 | -1.69E-46 |
| MS.gene051525 | MS.gene34845 | 0.851314 | 9.62E-61 | -1.69E-46 |
| MS.gene051582 | MS.gene34845 | 0.863099 | 3.17E-64 | -1.69E-46 |
| MS.gene051860 | MS.gene34845 | 0.834539 | 2.83E-56 | -1.69E-46 |
| MS.gene051983 | MS.gene34845 | 0.81177 | 5.93E-51 | -1.69E-46 |
| MS.gene052011 | MS.gene34845 | -0.844238 | 8.56E-59 | -1.69E-46 |
| MS.gene052077 | MS.gene34845 | 0.862556 | 4.66E-64 | -1.69E-46 |
| MS.gene052078 | MS.gene34845 | 0.811802 | 5.83E-51 | -1.69E-46 |
| MS.gene052134 | MS.gene34845 | 0.832858 | 7.44E-56 | -1.69E-46 |
| MS.gene052135 | MS.gene34845 | 0.847616 | 1.03E-59 | -1.69E-46 |
| MS.gene052136 | MS.gene34845 | 0.829608 | 4.68E-55 | -1.69E-46 |
| MS.gene052178 | MS.gene34845 | 0.801499 | 8.75E-49 | -1.69E-46 |
| MS.gene052188 | MS.gene34845 | 0.888801 | 4.28E-73 | -1.69E-46 |
| MS.gene052253 | MS.gene34845 | 0.872529 | 2.96E-67 | -1.69E-46 |
| MS.gene052255 | MS.gene34845 | 0.816825 | 4.53E-52 | -1.69E-46 |
| MS.gene052310 | MS.gene34845 | 0.851598 | 8.00E-61 | -1.69E-46 |
| MS.gene052322 | MS.gene34845 | 0.805643 | 1.21E-49 | -1.69E-46 |
| MS.gene052340 | MS.gene34845 | 0.877803 | 4.69E-69 | -1.69E-46 |
| MS.gene052414 | MS.gene34845 | 0.84183 | 3.74E-58 | -1.69E-46 |
| MS.gene052421 | MS.gene34845 | 0.837194 | 6.00E-57 | -1.69E-46 |
| MS.gene052481 | MS.gene34845 | 0.814009 | 1.92E-51 | -1.69E-46 |
| MS.gene052485 | MS.gene34845 | 0.857561 | 1.50E-62 | -1.69E-46 |
| MS.gene052758 | MS.gene34845 | 0.808428 | 3.11E-50 | -1.69E-46 |
| MS.gene052982 | MS.gene34845 | 0.821709 | 3.50E-53 | -1.69E-46 |
| MS.gene053169 | MS.gene34845 | 0.812187 | 4.81E-51 | -1.69E-46 |
| MS.gene05316 | MS.gene34845 | 0.835322 | 1.79E-56 | -1.69E-46 |
| MS.gene053209 | MS.gene34845 | 0.846637 | 1.92E-59 | -1.69E-46 |
| MS.gene053449 | MS.gene34845 | 0.800458 | 1.43E-48 | -1.69E-46 |
| MS.gene053494 | MS.gene34845 | 0.806401 | 8.37E-50 | -1.69E-46 |
| MS.gene053557 | MS.gene34845 | 0.835275 | 1.85E-56 | -1.69E-46 |
| MS.gene053758 | MS.gene34845 | 0.821226 | 4.52E-53 | -1.69E-46 |
| MS.gene053836 | MS.gene34845 | 0.852843 | 3.54E-61 | -1.69E-46 |
| MS.gene053912 | MS.gene34845 | 0.804695 | 1.91E-49 | -1.69E-46 |
| MS.gene053928 | MS.gene34845 | 0.859326 | 4.47E-63 | -1.69E-46 |
| MS.gene054010 | MS.gene34845 | 0.813891 | 2.03E-51 | -1.69E-46 |
| MS.gene054011 | MS.gene34845 | 0.816784 | 4.63E-52 | -1.69E-46 |
| MS.gene054012 | MS.gene34845 | 0.816127 | 6.49E-52 | -1.69E-46 |
| MS.gene054013 | MS.gene34845 | 0.810124 | 1.35E-50 | -1.69E-46 |
| MS.gene054123 | MS.gene34845 | 0.815782 | 7.75E-52 | -1.69E-46 |
| MS.gene054183 | MS.gene34845 | 0.861826 | 7.81E-64 | -1.69E-46 |
| MS.gene054349 | MS.gene34845 | 0.858069 | 1.06E-62 | -1.69E-46 |
| MS.gene054556 | MS.gene34845 | 0.845941 | 2.97E-59 | -1.69E-46 |
| MS.gene054719 | MS.gene34845 | 0.817101 | 3.93E-52 | -1.69E-46 |
| MS.gene054918 | MS.gene34845 | 0.840998 | 6.20E-58 | -1.69E-46 |
| MS.gene054930 | MS.gene34845 | 0.818799 | 1.62E-52 | -1.69E-46 |
| MS.gene05505 | MS.gene34845 | 0.814129 | 1.80E-51 | -1.69E-46 |
| MS.gene055116 | MS.gene34845 | 0.917616 | 4.28E-86 | -1.69E-46 |
| MS.gene055277 | MS.gene34845 | 0.842878 | 1.98E-58 | -1.69E-46 |
| MS.gene055369 | MS.gene34845 | 0.880656 | 4.59E-70 | -1.69E-46 |
| MS.gene055422 | MS.gene34845 | 0.835246 | 1.88E-56 | -1.69E-46 |
| MS.gene055428 | MS.gene34845 | 0.81766 | 2.94E-52 | -1.69E-46 |
| MS.gene055539 | MS.gene34845 | 0.810333 | 1.21E-50 | -1.69E-46 |
| MS.gene05553 | MS.gene34845 | 0.866164 | 3.48E-65 | -1.69E-46 |
| MS.gene055564 | MS.gene34845 | 0.828156 | 1.05E-54 | -1.69E-46 |
| MS.gene055601 | MS.gene34845 | -0.804604 | 1.99E-49 | -1.69E-46 |
| MS.gene055604 | MS.gene34845 | 0.840416 | 8.81E-58 | -1.69E-46 |
| MS.gene055666 | MS.gene34845 | 0.805808 | 1.12E-49 | -1.69E-46 |
| MS.gene055741 | MS.gene34845 | 0.804625 | 1.97E-49 | -1.69E-46 |
| MS.gene055744 | MS.gene34845 | 0.81689 | 4.38E-52 | -1.69E-46 |
| MS.gene055859 | MS.gene34845 | 0.820746 | 5.83E-53 | -1.69E-46 |
| MS.gene055909 | MS.gene34845 | 0.807852 | 4.13E-50 | -1.69E-46 |
| MS.gene055911 | MS.gene34845 | 0.813864 | 2.06E-51 | -1.69E-46 |
| MS.gene05594 | MS.gene34845 | 0.818716 | 1.70E-52 | -1.69E-46 |
| MS.gene056191 | MS.gene34845 | 0.828417 | 9.10E-55 | -1.69E-46 |
| MS.gene056233 | MS.gene34845 | 0.826022 | 3.41E-54 | -1.69E-46 |
| MS.gene056407 | MS.gene34845 | 0.872094 | 4.14E-67 | -1.69E-46 |
| MS.gene056511 | MS.gene34845 | 0.871024 | 9.36E-67 | -1.69E-46 |
| MS.gene056514 | MS.gene34845 | 0.819959 | 8.83E-53 | -1.69E-46 |
| MS.gene056612 | MS.gene34845 | 0.820746 | 5.83E-53 | -1.69E-46 |
| MS.gene056659 | MS.gene34845 | 0.867855 | 1.01E-65 | -1.69E-46 |
| MS.gene056723 | MS.gene34845 | 0.868842 | 4.83E-66 | -1.69E-46 |
| MS.gene056899 | MS.gene34845 | -0.847456 | 1.14E-59 | -1.69E-46 |
| MS.gene056902 | MS.gene34845 | 0.807198 | 5.68E-50 | -1.69E-46 |
| MS.gene056979 | MS.gene34845 | 0.81087 | 9.29E-51 | -1.69E-46 |
| MS.gene05702 | MS.gene34845 | 0.85416 | 1.48E-61 | -1.69E-46 |
| MS.gene057121 | MS.gene34845 | 0.805936 | 1.05E-49 | -1.69E-46 |
| MS.gene057124 | MS.gene34845 | 0.891789 | 2.88E-74 | -1.69E-46 |
| MS.gene057207 | MS.gene34845 | 0.817075 | 3.98E-52 | -1.69E-46 |
| MS.gene057396 | MS.gene34845 | 0.866222 | 3.34E-65 | -1.69E-46 |
| MS.gene057448 | MS.gene34845 | 0.877687 | 5.14E-69 | -1.69E-46 |
| MS.gene057449 | MS.gene34845 | 0.864638 | 1.05E-64 | -1.69E-46 |
| MS.gene057450 | MS.gene34845 | 0.873662 | 1.24E-67 | -1.69E-46 |
| MS.gene057469 | MS.gene34845 | 0.800089 | 1.70E-48 | -1.69E-46 |
| MS.gene057537 | MS.gene34845 | 0.813327 | 2.71E-51 | -1.69E-46 |
| MS.gene057749 | MS.gene34845 | 0.864667 | 1.03E-64 | -1.69E-46 |
| MS.gene057823 | MS.gene34845 | 0.859558 | 3.81E-63 | -1.69E-46 |
| MS.gene057825 | MS.gene34845 | 0.844131 | 9.14E-59 | -1.69E-46 |
| MS.gene057927 | MS.gene34845 | 0.812673 | 3.77E-51 | -1.69E-46 |
| MS.gene058002 | MS.gene34845 | 0.863182 | 2.99E-64 | -1.69E-46 |
| MS.gene058007 | MS.gene34845 | 0.825812 | 3.82E-54 | -1.69E-46 |
| MS.gene058082 | MS.gene34845 | 0.806208 | 9.20E-50 | -1.69E-46 |
| MS.gene05811 | MS.gene34845 | 0.831499 | 1.61E-55 | -1.69E-46 |
| MS.gene058142 | MS.gene34845 | 0.858718 | 6.80E-63 | -1.69E-46 |
| MS.gene058233 | MS.gene34845 | 0.810415 | 1.17E-50 | -1.69E-46 |
| MS.gene058276 | MS.gene34845 | 0.811373 | 7.23E-51 | -1.69E-46 |
| MS.gene058293 | MS.gene34845 | 0.817472 | 3.24E-52 | -1.69E-46 |
| MS.gene058365 | MS.gene34845 | 0.825504 | 4.52E-54 | -1.69E-46 |
| MS.gene058660 | MS.gene34845 | 0.828163 | 1.05E-54 | -1.69E-46 |
| MS.gene058700 | MS.gene34845 | 0.825468 | 4.61E-54 | -1.69E-46 |
| MS.gene058710 | MS.gene34845 | 0.842206 | 2.98E-58 | -1.69E-46 |
| MS.gene05886 | MS.gene34845 | 0.855252 | 7.15E-62 | -1.69E-46 |
| MS.gene058928 | MS.gene34845 | 0.857176 | 1.95E-62 | -1.69E-46 |
| MS.gene058948 | MS.gene34845 | 0.812604 | 3.90E-51 | -1.69E-46 |
| MS.gene058949 | MS.gene34845 | 0.862037 | 6.73E-64 | -1.69E-46 |
| MS.gene059011 | MS.gene34845 | 0.839558 | 1.47E-57 | -1.69E-46 |
| MS.gene05907 | MS.gene34845 | 0.864515 | 1.15E-64 | -1.69E-46 |
| MS.gene059082 | MS.gene34845 | 0.820576 | 6.38E-53 | -1.69E-46 |
| MS.gene059141 | MS.gene34845 | 0.831563 | 1.56E-55 | -1.69E-46 |
| MS.gene059247 | MS.gene34845 | 0.810057 | 1.39E-50 | -1.69E-46 |
| MS.gene059285 | MS.gene34845 | 0.860267 | 2.33E-63 | -1.69E-46 |
| MS.gene059294 | MS.gene34845 | 0.839415 | 1.61E-57 | -1.69E-46 |
| MS.gene059366 | MS.gene34845 | 0.851529 | 8.36E-61 | -1.69E-46 |
| MS.gene059420 | MS.gene34845 | 0.908441 | 1.70E-81 | -1.69E-46 |
| MS.gene059462 | MS.gene34845 | 0.834103 | 3.64E-56 | -1.69E-46 |
| MS.gene059597 | MS.gene34845 | 0.801953 | 7.06E-49 | -1.69E-46 |
| MS.gene05959 | MS.gene34845 | 0.80381 | 2.92E-49 | -1.69E-46 |
| MS.gene059676 | MS.gene34845 | 0.829322 | 5.49E-55 | -1.69E-46 |
| MS.gene059688 | MS.gene34845 | 0.884166 | 2.42E-71 | -1.69E-46 |
| MS.gene059692 | MS.gene34845 | 0.870868 | 1.05E-66 | -1.69E-46 |
| MS.gene059695 | MS.gene34845 | 0.872579 | 2.85E-67 | -1.69E-46 |
| MS.gene059807 | MS.gene34845 | 0.861913 | 7.34E-64 | -1.69E-46 |
| MS.gene05984 | MS.gene34845 | 0.855271 | 7.05E-62 | -1.69E-46 |
| MS.gene059876 | MS.gene34845 | 0.818253 | 2.16E-52 | -1.69E-46 |
| MS.gene059894 | MS.gene34845 | 0.839204 | 1.82E-57 | -1.69E-46 |
| MS.gene059933 | MS.gene34845 | 0.805044 | 1.61E-49 | -1.69E-46 |
| MS.gene060247 | MS.gene34845 | 0.800066 | 1.72E-48 | -1.69E-46 |
| MS.gene060372 | MS.gene34845 | 0.802797 | 4.73E-49 | -1.69E-46 |
| MS.gene06037 | MS.gene34845 | 0.835589 | 1.54E-56 | -1.69E-46 |
| MS.gene060403 | MS.gene34845 | 0.855091 | 7.96E-62 | -1.69E-46 |
| MS.gene060407 | MS.gene34845 | 0.818696 | 1.71E-52 | -1.69E-46 |
| MS.gene060495 | MS.gene34845 | 0.809955 | 1.47E-50 | -1.69E-46 |
| MS.gene060804 | MS.gene34845 | 0.812516 | 4.08E-51 | -1.69E-46 |
| MS.gene060835 | MS.gene34845 | 0.824533 | 7.67E-54 | -1.69E-46 |
| MS.gene060837 | MS.gene34845 | 0.828297 | 9.72E-55 | -1.69E-46 |
| MS.gene060986 | MS.gene34845 | 0.804356 | 2.25E-49 | -1.69E-46 |
| MS.gene061049 | MS.gene34845 | 0.876532 | 1.30E-68 | -1.69E-46 |
| MS.gene061051 | MS.gene34845 | -0.854161 | 1.48E-61 | -1.69E-46 |
| MS.gene061154 | MS.gene34845 | 0.896103 | 5.09E-76 | -1.69E-46 |
| MS.gene061159 | MS.gene34845 | 0.870206 | 1.74E-66 | -1.69E-46 |
PPI:
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene34845.t1 | MTR_0172s0030 | 95.866 | 508 | 17 | 3 | 1 | 508 | 1 | 504 | 0.0 | 986 |
| MS.gene34845.t1 | MTR_3g033420 | 34.568 | 324 | 187 | 7 | 180 | 494 | 84 | 391 | 1.81e-41 | 153 |
| MS.gene34845.t1 | MTR_3g118290 | 30.897 | 301 | 198 | 6 | 209 | 506 | 278 | 571 | 8.36e-40 | 152 |
| MS.gene34845.t1 | MTR_7g101840 | 31.046 | 306 | 199 | 5 | 202 | 503 | 254 | 551 | 3.59e-35 | 139 |
| MS.gene34845.t1 | MTR_1g063850 | 31.373 | 306 | 196 | 6 | 193 | 493 | 249 | 545 | 1.38e-34 | 137 |
| MS.gene34845.t1 | MTR_1g007370 | 28.671 | 286 | 189 | 5 | 212 | 494 | 263 | 536 | 6.87e-24 | 105 |
| MS.gene34845.t1 | MTR_3g090900 | 29.153 | 295 | 193 | 7 | 208 | 497 | 222 | 505 | 7.35e-22 | 99.0 |
| MS.gene34845.t1 | MTR_3g090900 | 30.570 | 193 | 126 | 4 | 208 | 396 | 222 | 410 | 3.59e-17 | 84.3 |
| MS.gene34845.t1 | MTR_1g007370 | 32.576 | 132 | 89 | 0 | 212 | 343 | 263 | 394 | 4.64e-16 | 80.5 |
| MS.gene34845.t1 | MTR_3g090900 | 32.692 | 156 | 96 | 4 | 208 | 358 | 222 | 373 | 4.78e-15 | 77.4 |
| MS.gene34845.t1 | MTR_3g033150 | 38.060 | 134 | 66 | 4 | 367 | 494 | 20 | 142 | 4.79e-14 | 70.1 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene34845.t1 | AT1G64860 | 67.704 | 514 | 148 | 6 | 1 | 508 | 1 | 502 | 0.0 | 680 |
| MS.gene34845.t1 | AT1G64860 | 66.042 | 480 | 145 | 6 | 1 | 474 | 1 | 468 | 0.0 | 619 |
| MS.gene34845.t1 | AT1G08540 | 33.548 | 310 | 192 | 6 | 202 | 506 | 269 | 569 | 1.30e-43 | 162 |
| MS.gene34845.t1 | AT5G13730 | 35.738 | 305 | 175 | 7 | 197 | 494 | 114 | 404 | 3.39e-39 | 147 |
| MS.gene34845.t1 | AT2G36990 | 31.373 | 306 | 198 | 5 | 193 | 494 | 235 | 532 | 1.37e-36 | 142 |
| MS.gene34845.t1 | AT5G24120 | 31.229 | 301 | 179 | 10 | 208 | 497 | 225 | 508 | 1.17e-24 | 107 |
| MS.gene34845.t1 | AT5G24120 | 31.229 | 301 | 179 | 10 | 208 | 497 | 225 | 508 | 1.17e-24 | 107 |
| MS.gene34845.t1 | AT5G24120 | 31.229 | 301 | 179 | 10 | 208 | 497 | 225 | 508 | 1.17e-24 | 107 |
| MS.gene34845.t1 | AT3G53920 | 30.508 | 236 | 147 | 7 | 265 | 493 | 332 | 557 | 4.34e-22 | 100 |
| MS.gene34845.t1 | AT3G53920 | 29.771 | 131 | 92 | 0 | 213 | 343 | 280 | 410 | 1.81e-13 | 72.8 |
Find 96 sgRNAs with CRISPR-Local
Find 216 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| TCTCATGCATCATGTGATTT+TGG | 0.161123 | 4.4:-60864033 | MS.gene34845:CDS |
| AGATTTCAACTTATGTTTAT+TGG | 0.176571 | 4.4:-60862285 | MS.gene34845:CDS |
| GAAATTGTTCGTCTTTATTA+TGG | 0.204119 | 4.4:-60860555 | MS.gene34845:CDS |
| TGCTCAAAGATATGATAATA+TGG | 0.212191 | 4.4:-60862490 | MS.gene34845:CDS |
| ATGGCTACTGCAGCAGTTAT+TGG | 0.235829 | 4.4:-60864120 | MS.gene34845:CDS |
| CCCTCTCTGAATGGTCTTCC+AGG | 0.256681 | 4.4:-60861375 | MS.gene34845:CDS |
| CTTTCCTTTGAGACATATTA+AGG | 0.259743 | 4.4:+60861553 | None:intergenic |
| TTTCTATAGGGTGGCTTGAT+TGG | 0.278153 | 4.4:-60862352 | MS.gene34845:intron |
| TTTCTATAATATCTGAATAA+TGG | 0.304580 | 4.4:+60864061 | None:intergenic |
| TGATTCGGAACAATGGTTTC+AGG | 0.310782 | 4.4:-60863860 | MS.gene34845:CDS |
| AAGGTATCTGTGACTTGTTC+TGG | 0.322986 | 4.4:-60863679 | MS.gene34845:CDS |
| TGATAATATGGGTGCTGAAA+TGG | 0.358343 | 4.4:-60862478 | MS.gene34845:CDS |
| TTCTGACATGGATTATTCAT+TGG | 0.361813 | 4.4:-60863806 | MS.gene34845:CDS |
| GAGAAGTTTGATTCGTCAAA+AGG | 0.378204 | 4.4:-60862313 | MS.gene34845:CDS |
| GGGGAATGCTTCCCTATCTA+AGG | 0.388400 | 4.4:+60861395 | None:intergenic |
| TAAAACATGCCGCAAGGAAG+AGG | 0.406736 | 4.4:-60859891 | MS.gene34845:CDS |
| AATGGAGTCTTTCATTTGAA+AGG | 0.424190 | 4.4:-60863744 | MS.gene34845:CDS |
| TGAAATGGGTGACCTTGTTC+AGG | 0.424346 | 4.4:-60862463 | MS.gene34845:intron |
| AGCTGACTTACATCAATAGT+TGG | 0.424691 | 4.4:+60861668 | None:intergenic |
| ATACAATTCTAATGACTTTG+AGG | 0.424774 | 4.4:-60863836 | MS.gene34845:CDS |
| TAGCGCCGTGCATGCTGATT+CGG | 0.432238 | 4.4:-60863875 | MS.gene34845:CDS |
| TGTTCGTCTTTATTATGGAT+TGG | 0.438429 | 4.4:-60860550 | MS.gene34845:CDS |
| GATAATATGGGTGCTGAAAT+GGG | 0.453441 | 4.4:-60862477 | MS.gene34845:CDS |
| CTTTCAGATGGTGGAAAAGT+TGG | 0.468943 | 4.4:+60863943 | None:intergenic |
| ACTTATTCAAAACCGTTTGA+AGG | 0.475324 | 4.4:-60863560 | MS.gene34845:CDS |
| GGCTTGATTGGACTACTTCG+TGG | 0.478283 | 4.4:-60862340 | MS.gene34845:CDS |
| AAGTGTTGAGTGAGAATTCG+AGG | 0.479531 | 4.4:-60863720 | MS.gene34845:CDS |
| TGTTTATTGGTGGATACGAC+AGG | 0.480869 | 4.4:-60862272 | MS.gene34845:intron |
| TTTCAACTTATGTTTATTGG+TGG | 0.482222 | 4.4:-60862282 | MS.gene34845:CDS |
| TTACTTGAATTTCAGACTGA+AGG | 0.486903 | 4.4:-60862655 | MS.gene34845:intron |
| TTCAGACTGAAGGAAAGATT+AGG | 0.487299 | 4.4:-60862645 | MS.gene34845:intron |
| GCTCAAAGATATGATAATAT+GGG | 0.492997 | 4.4:-60862489 | MS.gene34845:CDS |
| CTTATTCAAAACCGTTTGAA+GGG | 0.494758 | 4.4:-60863559 | MS.gene34845:CDS |
| TGCCCGCTCATTTGCATGAG+AGG | 0.499729 | 4.4:-60861742 | MS.gene34845:CDS |
| GTTTGTCGAGAGAAAGAGTA+AGG | 0.499968 | 4.4:-60859942 | MS.gene34845:CDS |
| GATTCGGAACAATGGTTTCA+GGG | 0.500906 | 4.4:-60863859 | MS.gene34845:CDS |
| CAAGCGTCTACTCCATTCCA+TGG | 0.502498 | 4.4:+60861169 | None:intergenic |
| TGATTCTGCTGCCTTTCAGA+TGG | 0.506025 | 4.4:+60863931 | None:intergenic |
| CTTTCACATATCCCTTCAAA+CGG | 0.507198 | 4.4:+60863548 | None:intergenic |
| ATATCAATGTTTCAAAAGCA+TGG | 0.511850 | 4.4:+60859858 | None:intergenic |
| TCAGTCTATCAAGGCACTTA+AGG | 0.517482 | 4.4:-60863911 | MS.gene34845:CDS |
| CATGGAATGGAGTAGACGCT+TGG | 0.519764 | 4.4:-60861168 | MS.gene34845:CDS |
| TTTGCTGCAGAAGTCGATGT+TGG | 0.520203 | 4.4:-60863773 | MS.gene34845:CDS |
| AGTAGACGCTTGGGCTCTAA+AGG | 0.523381 | 4.4:-60861158 | MS.gene34845:intron |
| CATGGGAAGACATTAGTAAA+CGG | 0.524317 | 4.4:-60860512 | MS.gene34845:intron |
| AGAGAAAGAGTAAGGCAAGT+TGG | 0.524872 | 4.4:-60859934 | MS.gene34845:CDS |
| TTCTGCTGCCTTTCAGATGG+TGG | 0.525613 | 4.4:+60863934 | None:intergenic |
| GCTTGATTGGACTACTTCGT+GGG | 0.528031 | 4.4:-60862339 | MS.gene34845:CDS |
| TTTCTCTCTCGCGTTCCACA+AGG | 0.530808 | 4.4:+60860574 | None:intergenic |
| GAAGCATTCCCCTCTCTGAA+TGG | 0.535106 | 4.4:-60861384 | MS.gene34845:CDS |
| ATTATCATATCTTTGAGCAA+TGG | 0.535824 | 4.4:+60862494 | None:intergenic |
| TGGATAAAGAATGTCTTACA+TGG | 0.535990 | 4.4:-60860530 | MS.gene34845:CDS |
| ATGGAATGGAGTAGACGCTT+GGG | 0.538217 | 4.4:-60861167 | MS.gene34845:CDS |
| ATTTATGCTCATCTAAAGAA+AGG | 0.538677 | 4.4:+60863458 | None:intergenic |
| ACGCTGTGATGAGTGTCTCC+TGG | 0.542065 | 4.4:+60861357 | None:intergenic |
| CTTTAGATGAGCATAAATCC+AGG | 0.545580 | 4.4:-60863453 | MS.gene34845:intron |
| AACCTCTCATGCAAATGAGC+GGG | 0.548183 | 4.4:+60861740 | None:intergenic |
| AGGAAGATCGCTGCTAAAAG+TGG | 0.552288 | 4.4:-60863622 | MS.gene34845:CDS |
| TGCCGCAAGGAAGAGGGAGA+TGG | 0.552494 | 4.4:-60859884 | MS.gene34845:CDS |
| GCAGCAGTTATTGGATTGAG+TGG | 0.555881 | 4.4:-60864111 | MS.gene34845:CDS |
| TTATCTGAGAAAATTAAAGC+TGG | 0.559702 | 4.4:-60863481 | MS.gene34845:CDS |
| ATTCGAGGAGAGAAAAGATA+CGG | 0.560825 | 4.4:-60863705 | MS.gene34845:CDS |
| GCAGCAGAATCAGTCTATCA+AGG | 0.560868 | 4.4:-60863920 | MS.gene34845:CDS |
| AACAAAATGAGAACATCCCA+TGG | 0.568183 | 4.4:-60861186 | MS.gene34845:CDS |
| AATGAGAACATCCCATGGAA+TGG | 0.568965 | 4.4:-60861181 | MS.gene34845:CDS |
| GTTCTGCAGTGATGCAGCTG+AGG | 0.571648 | 4.4:-60863600 | MS.gene34845:CDS |
| GCAAGTTGGACTTGTTGCGT+TGG | 0.576164 | 4.4:-60859920 | MS.gene34845:CDS |
| TGCATGCTGATTCGGAACAA+TGG | 0.577935 | 4.4:-60863867 | MS.gene34845:CDS |
| AAAACATGCCGCAAGGAAGA+GGG | 0.578890 | 4.4:-60859890 | MS.gene34845:CDS |
| CTTGTTCTGGAGTGTCTGCA+AGG | 0.578924 | 4.4:-60863666 | MS.gene34845:CDS |
| TGAGGTTGAAAGTTCTGACA+TGG | 0.586396 | 4.4:-60863818 | MS.gene34845:CDS |
| AAAGCCTTAATATGTCTCAA+AGG | 0.587061 | 4.4:-60861557 | MS.gene34845:CDS |
| CGAAGTTGCAACTTGATCAT+CGG | 0.587519 | 4.4:+60862611 | None:intergenic |
| AGTCGATGTTGGAAAAGCAA+TGG | 0.589446 | 4.4:-60863762 | MS.gene34845:CDS |
| GAGTATAGACTCGAAGAGAG+AGG | 0.594019 | 4.4:-60861698 | MS.gene34845:CDS |
| CGTTTGAAGGGATATGTGAA+AGG | 0.601034 | 4.4:-60863547 | MS.gene34845:CDS |
| TTGTTCCGAATCAGCATGCA+CGG | 0.602330 | 4.4:+60863870 | None:intergenic |
| TTCCATCTCCCTCTTCCTTG+CGG | 0.603171 | 4.4:+60859882 | None:intergenic |
| AAAGAAGAATGACAATCAAG+AGG | 0.607282 | 4.4:-60863642 | MS.gene34845:CDS |
| GAGAGAAAAGATACGGAGGA+AGG | 0.610835 | 4.4:-60863698 | MS.gene34845:CDS |
| CCTGGAAGACCATTCAGAGA+GGG | 0.620461 | 4.4:+60861375 | None:intergenic |
| ACTCATTAATGTGACCCTTG+TGG | 0.624531 | 4.4:-60860589 | MS.gene34845:CDS |
| AAGCGTCTACTCCATTCCAT+GGG | 0.627442 | 4.4:+60861170 | None:intergenic |
| TTCTCTCTCGCGTTCCACAA+GGG | 0.627798 | 4.4:+60860575 | None:intergenic |
| GCAGTTATTGGATTGAGTGG+AGG | 0.629684 | 4.4:-60864108 | MS.gene34845:CDS |
| TCTTTATAATCACCTGAACA+AGG | 0.630384 | 4.4:+60862451 | None:intergenic |
| GTTGCAACTTGATCATCGGA+AGG | 0.630637 | 4.4:+60862615 | None:intergenic |
| CTGGAAGACCATTCAGAGAG+GGG | 0.641914 | 4.4:+60861376 | None:intergenic |
| TAACCTCTCATGCAAATGAG+CGG | 0.653968 | 4.4:+60861739 | None:intergenic |
| GGATAAAGAATGTCTTACAT+GGG | 0.654591 | 4.4:-60860529 | MS.gene34845:CDS |
| GAAAGTCAGAAATGCTACTG+AGG | 0.657628 | 4.4:-60861535 | MS.gene34845:intron |
| AGAAACTAAAACATGCCGCA+AGG | 0.670521 | 4.4:-60859897 | MS.gene34845:CDS |
| CGAGGAGAGAAAAGATACGG+AGG | 0.677037 | 4.4:-60863702 | MS.gene34845:CDS |
| TCCTGGAAGACCATTCAGAG+AGG | 0.692795 | 4.4:+60861374 | None:intergenic |
| CGAGTCTATACTCTGCATTG+CGG | 0.732447 | 4.4:+60861708 | None:intergenic |
| AGGAGGAAGTTGATACTGTG+TGG | 0.743332 | 4.4:+60864008 | None:intergenic |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !!! | TTATATCAACATTATTATTT+TGG | + | chr4.4:60863274-60863293 | None:intergenic | 10.0% |
| !! | AAAACAAAAACAAGAAAAAA+TGG | + | chr4.4:60862071-60862090 | None:intergenic | 15.0% |
| !! | ACAAATGGTATTAATATTTA+TGG | + | chr4.4:60863346-60863365 | None:intergenic | 15.0% |
| !! | ATTATAAAATAGAAGCTATA+TGG | + | chr4.4:60861930-60861949 | None:intergenic | 15.0% |
| !! | TTCAAAATGATTTATGAAAT+TGG | - | chr4.4:60863653-60863672 | MS.gene34845:CDS | 15.0% |
| !! | TTTCTATAATATCTGAATAA+TGG | + | chr4.4:60859923-60859942 | None:intergenic | 15.0% |
| !!! | TAGTTTTCTTTTTTAGTTTA+TGG | - | chr4.4:60860911-60860930 | MS.gene34845:intron | 15.0% |
| !!! | TATTTTAAAGAAACTGTTTT+AGG | + | chr4.4:60861888-60861907 | None:intergenic | 15.0% |
| !! | AAAATTGATGTATTCGAAAT+GGG | - | chr4.4:60863030-60863049 | MS.gene34845:intron | 20.0% |
| !! | AGATTTCAACTTATGTTTAT+TGG | - | chr4.4:60861696-60861715 | MS.gene34845:CDS | 20.0% |
| !! | AGTCAATTTACAAAATTATC+TGG | + | chr4.4:60861244-60861263 | None:intergenic | 20.0% |
| !! | ATAAGATACATAAAGTAACA+TGG | + | chr4.4:60861202-60861221 | None:intergenic | 20.0% |
| !! | ATACAACAAAAAGTAATTAG+TGG | + | chr4.4:60863067-60863086 | None:intergenic | 20.0% |
| !! | ATTATTATCGTAAGTAAACA+AGG | - | chr4.4:60860796-60860815 | MS.gene34845:intron | 20.0% |
| !! | TACCATTTGTAAATATTTAC+AGG | - | chr4.4:60863356-60863375 | MS.gene34845:intron | 20.0% |
| !! | TTACGTAAAAATTTATGCTA+TGG | + | chr4.4:60863871-60863890 | None:intergenic | 20.0% |
| !! | TTATTATCGTAAGTAAACAA+GGG | - | chr4.4:60860797-60860816 | MS.gene34845:intron | 20.0% |
| !! | TTCCTGTAAATATTTACAAA+TGG | + | chr4.4:60863361-60863380 | None:intergenic | 20.0% |
| !!! | AATGAGACAATTGATATTTT+TGG | + | chr4.4:60862740-60862759 | None:intergenic | 20.0% |
| !!! | AATTATGTGCGTAAATTTTA+TGG | - | chr4.4:60862970-60862989 | MS.gene34845:intron | 20.0% |
| !!! | ATGAGACAATTGATATTTTT+GGG | + | chr4.4:60862739-60862758 | None:intergenic | 20.0% |
| !!! | GTTTTTGTTTTCATTAGTTT+CGG | - | chr4.4:60862080-60862099 | MS.gene34845:intron | 20.0% |
| !!! | TATCATCGTATAATTTTACT+TGG | + | chr4.4:60863542-60863561 | None:intergenic | 20.0% |
| !!! | TATTTTTGGGAAAAATACAA+AGG | + | chr4.4:60862726-60862745 | None:intergenic | 20.0% |
| !!! | TCAGCATTTTTCAATTTAAT+AGG | + | chr4.4:60863209-60863228 | None:intergenic | 20.0% |
| !!! | TCTGTAGTAATAATTTTAGA+TGG | - | chr4.4:60862026-60862045 | MS.gene34845:intron | 20.0% |
| !!! | TTGGAAATTTTCTTTTACTT+AGG | - | chr4.4:60863672-60863691 | MS.gene34845:CDS | 20.0% |
| !!! | TTTGTTGTATAAAAACAATC+AGG | - | chr4.4:60863077-60863096 | MS.gene34845:intron | 20.0% |
| ! | AAAGGTAATAAGCAAAACAT+CGG | - | chr4.4:60862841-60862860 | MS.gene34845:intron | 25.0% |
| ! | ATAAAGTTCAGCTATGTATT+AGG | + | chr4.4:60863103-60863122 | None:intergenic | 25.0% |
| ! | ATACAATTCTAATGACTTTG+AGG | - | chr4.4:60860145-60860164 | MS.gene34845:intron | 25.0% |
| ! | ATGTATCTTATATCGTTTGA+GGG | - | chr4.4:60861211-60861230 | MS.gene34845:intron | 25.0% |
| ! | ATTATCATATCTTTGAGCAA+TGG | + | chr4.4:60861490-60861509 | None:intergenic | 25.0% |
| ! | ATTTATGCTCATCTAAAGAA+AGG | + | chr4.4:60860526-60860545 | None:intergenic | 25.0% |
| ! | CAAAATTGATGTATTCGAAA+TGG | - | chr4.4:60863029-60863048 | MS.gene34845:intron | 25.0% |
| ! | CAATTTACAAAATTATCTGG+CGG | + | chr4.4:60861241-60861260 | None:intergenic | 25.0% |
| ! | CTGATTTATTGCAGAAATTA+TGG | + | chr4.4:60861975-60861994 | None:intergenic | 25.0% |
| ! | CTTCTACAATTACACAATTA+TGG | + | chr4.4:60860641-60860660 | None:intergenic | 25.0% |
| ! | GAAATTGTTCGTCTTTATTA+TGG | - | chr4.4:60863426-60863445 | MS.gene34845:intron | 25.0% |
| ! | GACAATGAAATAATTGCATT+AGG | - | chr4.4:60861075-60861094 | MS.gene34845:intron | 25.0% |
| ! | GACCTTATCAAATACTAAAT+TGG | - | chr4.4:60863812-60863831 | MS.gene34845:CDS | 25.0% |
| ! | GATAATATCAAGGACTAAAT+TGG | + | chr4.4:60863700-60863719 | None:intergenic | 25.0% |
| ! | GATATTACATTAAGTGTATG+TGG | + | chr4.4:60862499-60862518 | None:intergenic | 25.0% |
| ! | GCTCAAAGATATGATAATAT+GGG | - | chr4.4:60861492-60861511 | MS.gene34845:intron | 25.0% |
| ! | GTTTCTGTAAGATAATATCA+AGG | + | chr4.4:60863710-60863729 | None:intergenic | 25.0% |
| ! | TAACACTAGTAACAATTTCA+TGG | + | chr4.4:60863597-60863616 | None:intergenic | 25.0% |
| ! | TATGTATCTTATATCGTTTG+AGG | - | chr4.4:60861210-60861229 | MS.gene34845:intron | 25.0% |
| ! | TGCAATTCTCTACAAAATAA+GGG | + | chr4.4:60862403-60862422 | None:intergenic | 25.0% |
| ! | TGCATATAATCAATATCACT+TGG | - | chr4.4:60863135-60863154 | MS.gene34845:intron | 25.0% |
| ! | TGCTCAAAGATATGATAATA+TGG | - | chr4.4:60861491-60861510 | MS.gene34845:intron | 25.0% |
| ! | TTATCTGAGAAAATTAAAGC+TGG | - | chr4.4:60860500-60860519 | MS.gene34845:intron | 25.0% |
| ! | TTGCAATTCTCTACAAAATA+AGG | + | chr4.4:60862404-60862423 | None:intergenic | 25.0% |
| ! | TTTACGCACATAATTAAAGA+AGG | + | chr4.4:60862965-60862984 | None:intergenic | 25.0% |
| ! | TTTCAACTTATGTTTATTGG+TGG | - | chr4.4:60861699-60861718 | MS.gene34845:CDS | 25.0% |
| !!! | CAACATTATTATTTTGGTGT+AGG | + | chr4.4:60863268-60863287 | None:intergenic | 25.0% |
| !!! | TAAATTGACTTCTTTTCTTG+TGG | - | chr4.4:60861254-60861273 | MS.gene34845:intron | 25.0% |
| !!! | TTTTTTCTACAAATCCATCA+TGG | - | chr4.4:60862663-60862682 | MS.gene34845:intron | 25.0% |
| AAAGAAGAATGACAATCAAG+AGG | - | chr4.4:60860339-60860358 | MS.gene34845:intron | 30.0% | |
| AAAGAAGTAACAAACTGTCA+CGG | + | chr4.4:60863504-60863523 | None:intergenic | 30.0% | |
| AAAGCCTTAATATGTCTCAA+AGG | - | chr4.4:60862424-60862443 | MS.gene34845:intron | 30.0% | |
| AAATGCTGAATGAGCAAAAA+AGG | - | chr4.4:60863220-60863239 | MS.gene34845:intron | 30.0% | |
| AATGGAGTCTTTCATTTGAA+AGG | - | chr4.4:60860237-60860256 | MS.gene34845:intron | 30.0% | |
| ACGATGATACATCATCTTAT+TGG | - | chr4.4:60863553-60863572 | MS.gene34845:CDS | 30.0% | |
| ACTTATTCAAAACCGTTTGA+AGG | - | chr4.4:60860421-60860440 | MS.gene34845:intron | 30.0% | |
| ATAAGACTAAATTGTCACCT+AGG | - | chr4.4:60863790-60863809 | MS.gene34845:CDS | 30.0% | |
| ATCAAATATTTGCCTCACAT+TGG | - | chr4.4:60861015-60861034 | MS.gene34845:intron | 30.0% | |
| ATTAATCCTACAACTGAATG+AGG | - | chr4.4:60860757-60860776 | MS.gene34845:intron | 30.0% | |
| ATTGCATTAGGATGTACTAT+AGG | - | chr4.4:60861087-60861106 | MS.gene34845:intron | 30.0% | |
| CGATGATACATCATCTTATT+GGG | - | chr4.4:60863554-60863573 | MS.gene34845:CDS | 30.0% | |
| CGCCAATTTAGTATTTGATA+AGG | + | chr4.4:60863817-60863836 | None:intergenic | 30.0% | |
| CTTATTCAAAACCGTTTGAA+GGG | - | chr4.4:60860422-60860441 | MS.gene34845:intron | 30.0% | |
| GAAGATACGAAGTTAAAACA+AGG | + | chr4.4:60861559-60861578 | None:intergenic | 30.0% | |
| GCAATATATTGTTGGAATGA+AGG | + | chr4.4:60861047-60861066 | None:intergenic | 30.0% | |
| GGATAAAGAATGTCTTACAT+GGG | - | chr4.4:60863452-60863471 | MS.gene34845:intron | 30.0% | |
| TAACAAGCCATACAAAAACT+AGG | + | chr4.4:60861767-60861786 | None:intergenic | 30.0% | |
| TCAGCACAATTATTTAGTGA+CGG | + | chr4.4:60862173-60862192 | None:intergenic | 30.0% | |
| TCATTCCAACAATATATTGC+TGG | - | chr4.4:60861047-60861066 | MS.gene34845:intron | 30.0% | |
| TCTTTATAATCACCTGAACA+AGG | + | chr4.4:60861533-60861552 | None:intergenic | 30.0% | |
| TGGATAAAGAATGTCTTACA+TGG | - | chr4.4:60863451-60863470 | MS.gene34845:intron | 30.0% | |
| TGGGAAAAATACAAAGGAAA+AGG | + | chr4.4:60862720-60862739 | None:intergenic | 30.0% | |
| TGTTCGTCTTTATTATGGAT+TGG | - | chr4.4:60863431-60863450 | MS.gene34845:intron | 30.0% | |
| TTACTTGAATTTCAGACTGA+AGG | - | chr4.4:60861326-60861345 | MS.gene34845:intron | 30.0% | |
| TTAGTATTTGATAAGGTCCT+AGG | + | chr4.4:60863810-60863829 | None:intergenic | 30.0% | |
| TTCTTAAGCTAAGCAATCTT+TGG | - | chr4.4:60860674-60860693 | MS.gene34845:intron | 30.0% | |
| TTGCATTAGGATGTACTATA+GGG | - | chr4.4:60861088-60861107 | MS.gene34845:intron | 30.0% | |
| ! | ACTAAATAATTGTGCTGACA+GGG | - | chr4.4:60862175-60862194 | MS.gene34845:intron | 30.0% |
| ! | CAAAGTTTTCTCCTTAGATA+GGG | - | chr4.4:60862575-60862594 | MS.gene34845:CDS | 30.0% |
| ! | GCAACTATTACAGATTTTGA+AGG | + | chr4.4:60859996-60860015 | None:intergenic | 30.0% |
| ! | TCGTATAATTTTACTTGGCA+AGG | + | chr4.4:60863537-60863556 | None:intergenic | 30.0% |
| ! | TTCTGACATGGATTATTCAT+TGG | - | chr4.4:60860175-60860194 | MS.gene34845:intron | 30.0% |
| !! | ACTATTACAGATTTTGAAGG+AGG | + | chr4.4:60859993-60860012 | None:intergenic | 30.0% |
| !! | CTTTCCTTTGAGACATATTA+AGG | + | chr4.4:60862431-60862450 | None:intergenic | 30.0% |
| !! | TTCCAAACCTAGTTTTTGTA+TGG | - | chr4.4:60861757-60861776 | MS.gene34845:CDS | 30.0% |
| !! | TTTGATATAAAGAGCATTGC+AGG | + | chr4.4:60862942-60862961 | None:intergenic | 30.0% |
| !!! | AAACGGTTTTGAATAAGTTC+GGG | + | chr4.4:60860419-60860438 | None:intergenic | 30.0% |
| !!! | CAAACGGTTTTGAATAAGTT+CGG | + | chr4.4:60860420-60860439 | None:intergenic | 30.0% |
| AACAAAATGAGAACATCCCA+TGG | - | chr4.4:60862795-60862814 | MS.gene34845:intron | 35.0% | |
| AACAAGGGTTCTATCATTCT+CGG | - | chr4.4:60860812-60860831 | MS.gene34845:intron | 35.0% | |
| AATCCAATGATCTTCCATGA+TGG | + | chr4.4:60862680-60862699 | None:intergenic | 35.0% | |
| AATCCATCATGGAAGATCAT+TGG | - | chr4.4:60862674-60862693 | MS.gene34845:intron | 35.0% | |
| AGCCATACAAAAACTAGGTT+TGG | + | chr4.4:60861762-60861781 | None:intergenic | 35.0% | |
| ATTATGAACACCAACAATGC+AGG | + | chr4.4:60860560-60860579 | None:intergenic | 35.0% | |
| ATTCGAGGAGAGAAAAGATA+CGG | - | chr4.4:60860276-60860295 | MS.gene34845:intron | 35.0% | |
| CAATTTAATAGGCACTCTCA+TGG | + | chr4.4:60863198-60863217 | None:intergenic | 35.0% | |
| CACGTTTGAATGATCAATCA+TGG | - | chr4.4:60860732-60860751 | MS.gene34845:intron | 35.0% | |
| CATGGGAAGACATTAGTAAA+CGG | - | chr4.4:60863469-60863488 | MS.gene34845:CDS | 35.0% | |
| CGTGTGTATATTCATATTGC+AGG | - | chr4.4:60862545-60862564 | MS.gene34845:CDS | 35.0% | |
| CTAATTCCTCATTCAGTTGT+AGG | + | chr4.4:60860766-60860785 | None:intergenic | 35.0% | |
| CTTTAGATGAGCATAAATCC+AGG | - | chr4.4:60860528-60860547 | MS.gene34845:CDS | 35.0% | |
| CTTTCACATATCCCTTCAAA+CGG | + | chr4.4:60860436-60860455 | None:intergenic | 35.0% | |
| GCAGAAATTATGGCTCAAAA+TGG | + | chr4.4:60861965-60861984 | None:intergenic | 35.0% | |
| GTAGAGTATGTTATGACATC+AGG | - | chr4.4:60862992-60863011 | MS.gene34845:intron | 35.0% | |
| GTAGATGGGAAAATACTTTC+TGG | - | chr4.4:60861856-60861875 | MS.gene34845:intron | 35.0% | |
| TACCACCAGCAATATATTGT+TGG | + | chr4.4:60861055-60861074 | None:intergenic | 35.0% | |
| TGTTCAGAACGTACATTTGA+TGG | - | chr4.4:60863897-60863916 | MS.gene34845:CDS | 35.0% | |
| TTATGCTTTGCAATCAAGAC+AGG | + | chr4.4:60862874-60862893 | None:intergenic | 35.0% | |
| TTCAGACTGAAGGAAAGATT+AGG | - | chr4.4:60861336-60861355 | MS.gene34845:intron | 35.0% | |
| TTCCAACAATATATTGCTGG+TGG | - | chr4.4:60861050-60861069 | MS.gene34845:intron | 35.0% | |
| ! | AGCTGACTTACATCAATAGT+TGG | + | chr4.4:60862316-60862335 | None:intergenic | 35.0% |
| ! | AGTGAACTGAACATTTTTGC+AGG | - | chr4.4:60860941-60860960 | MS.gene34845:intron | 35.0% |
| ! | ATTTTACTTGGCAAGGACAT+TGG | + | chr4.4:60863530-60863549 | None:intergenic | 35.0% |
| ! | CACTAAATAATTGTGCTGAC+AGG | - | chr4.4:60862174-60862193 | MS.gene34845:intron | 35.0% |
| ! | GAGAAGTTTGATTCGTCAAA+AGG | - | chr4.4:60861668-60861687 | MS.gene34845:intron | 35.0% |
| ! | GCAAAGTTTTCTCCTTAGAT+AGG | - | chr4.4:60862574-60862593 | MS.gene34845:CDS | 35.0% |
| ! | TCTCATGCATCATGTGATTT+TGG | - | chr4.4:60859948-60859967 | MS.gene34845:CDS | 35.0% |
| !! | GATAATATGGGTGCTGAAAT+GGG | - | chr4.4:60861504-60861523 | MS.gene34845:intron | 35.0% |
| !! | TGATAATATGGGTGCTGAAA+TGG | - | chr4.4:60861503-60861522 | MS.gene34845:intron | 35.0% |
| !!! | GTTTTGAGAAATCTGTGCAA+GGG | - | chr4.4:60862119-60862138 | MS.gene34845:intron | 35.0% |
| !!! | TGTTTTGAGAAATCTGTGCA+AGG | - | chr4.4:60862118-60862137 | MS.gene34845:intron | 35.0% |
| AATCGTCGTAAATTCACCGA+TGG | - | chr4.4:60861822-60861841 | MS.gene34845:intron | 40.0% | |
| AATGAGAACATCCCATGGAA+TGG | - | chr4.4:60862800-60862819 | MS.gene34845:intron | 40.0% | |
| AATTGGCGATTCACTTTCAG+AGG | - | chr4.4:60863829-60863848 | MS.gene34845:CDS | 40.0% | |
| ACTCATTAATGTGACCCTTG+TGG | - | chr4.4:60863392-60863411 | MS.gene34845:intron | 40.0% | |
| AGAAACTAAAACATGCCGCA+AGG | - | chr4.4:60864084-60864103 | MS.gene34845:CDS | 40.0% | |
| AGAGAAAGAGTAAGGCAAGT+TGG | - | chr4.4:60864047-60864066 | MS.gene34845:CDS | 40.0% | |
| AGTCGATGTTGGAAAAGCAA+TGG | - | chr4.4:60860219-60860238 | MS.gene34845:intron | 40.0% | |
| CGAAGTTGCAACTTGATCAT+CGG | + | chr4.4:60861373-60861392 | None:intergenic | 40.0% | |
| CGTTTGAAGGGATATGTGAA+AGG | - | chr4.4:60860434-60860453 | MS.gene34845:intron | 40.0% | |
| GAAAGTCAGAAATGCTACTG+AGG | - | chr4.4:60862446-60862465 | MS.gene34845:intron | 40.0% | |
| GATTCGGAACAATGGTTTCA+GGG | - | chr4.4:60860122-60860141 | MS.gene34845:intron | 40.0% | |
| GCACAATTATTTAGTGACGG+TGG | + | chr4.4:60862170-60862189 | None:intergenic | 40.0% | |
| GTTTGTCGAGAGAAAGAGTA+AGG | - | chr4.4:60864039-60864058 | MS.gene34845:CDS | 40.0% | |
| TAAATTCACCGATGGATGCA+AGG | - | chr4.4:60861830-60861849 | MS.gene34845:intron | 40.0% | |
| TAACCTCTCATGCAAATGAG+CGG | + | chr4.4:60862245-60862264 | None:intergenic | 40.0% | |
| TGAAGGCTAAAACCAATGTG+AGG | + | chr4.4:60861030-60861049 | None:intergenic | 40.0% | |
| TTTCTATAGGGTGGCTTGAT+TGG | - | chr4.4:60861629-60861648 | MS.gene34845:intron | 40.0% | |
| ! | CAACTTTTCCACCATCTGAA+AGG | - | chr4.4:60860039-60860058 | MS.gene34845:intron | 40.0% |
| ! | GAACTGAACATTTTTGCAGG+TGG | - | chr4.4:60860944-60860963 | MS.gene34845:intron | 40.0% |
| ! | TCAGTCTATCAAGGCACTTA+AGG | - | chr4.4:60860070-60860089 | MS.gene34845:intron | 40.0% |
| ! | TCGTGTTATTCCTACAGGAT+AGG | - | chr4.4:60864017-60864036 | MS.gene34845:CDS | 40.0% |
| ! | TGAGGTTGAAAGTTCTGACA+TGG | - | chr4.4:60860163-60860182 | MS.gene34845:intron | 40.0% |
| ! | TGATTCGGAACAATGGTTTC+AGG | - | chr4.4:60860121-60860140 | MS.gene34845:intron | 40.0% |
| ! | TGTTTATTGGTGGATACGAC+AGG | - | chr4.4:60861709-60861728 | MS.gene34845:CDS | 40.0% |
| !! | AAAGAGCATTGCAGGATAGA+AGG | + | chr4.4:60862934-60862953 | None:intergenic | 40.0% |
| !! | AAGGTATCTGTGACTTGTTC+TGG | - | chr4.4:60860302-60860321 | MS.gene34845:intron | 40.0% |
| !! | AAGTGTTGAGTGAGAATTCG+AGG | - | chr4.4:60860261-60860280 | MS.gene34845:intron | 40.0% |
| !! | CTTTCAGATGGTGGAAAAGT+TGG | + | chr4.4:60860041-60860060 | None:intergenic | 40.0% |
| !! | GTCTTCAACATTGACTTTCG+AGG | + | chr4.4:60860890-60860909 | None:intergenic | 40.0% |
| !!! | ACTCGCCTTGCTTTTTCTAT+AGG | - | chr4.4:60861616-60861635 | MS.gene34845:intron | 40.0% |
| !!! | CTCGCCTTGCTTTTTCTATA+GGG | - | chr4.4:60861617-60861636 | MS.gene34845:intron | 40.0% |
| AAAACATGCCGCAAGGAAGA+GGG | - | chr4.4:60864091-60864110 | MS.gene34845:CDS | 45.0% | |
| AACCTCTCATGCAAATGAGC+GGG | + | chr4.4:60862244-60862263 | None:intergenic | 45.0% | |
| AAGCGTCTACTCCATTCCAT+GGG | + | chr4.4:60862814-60862833 | None:intergenic | 45.0% | |
| AGGAAGATCGCTGCTAAAAG+TGG | - | chr4.4:60860359-60860378 | MS.gene34845:intron | 45.0% | |
| ATGGAATGGAGTAGACGCTT+GGG | - | chr4.4:60862814-60862833 | MS.gene34845:intron | 45.0% | |
| ATGGATGCAAGGACAGTAGA+TGG | - | chr4.4:60861841-60861860 | MS.gene34845:intron | 45.0% | |
| ATGGCTACTGCAGCAGTTAT+TGG | - | chr4.4:60859861-60859880 | MS.gene34845:CDS | 45.0% | |
| CAACAATGCAGGCATTTACC+TGG | + | chr4.4:60860549-60860568 | None:intergenic | 45.0% | |
| CAGGTAAATGCCTGCATTGT+TGG | - | chr4.4:60860547-60860566 | MS.gene34845:CDS | 45.0% | |
| CGAGTCTATACTCTGCATTG+CGG | + | chr4.4:60862276-60862295 | None:intergenic | 45.0% | |
| GAGAGAAAAGATACGGAGGA+AGG | - | chr4.4:60860283-60860302 | MS.gene34845:intron | 45.0% | |
| GAGTATAGACTCGAAGAGAG+AGG | - | chr4.4:60862283-60862302 | MS.gene34845:CDS | 45.0% | |
| GCAGCAGAATCAGTCTATCA+AGG | - | chr4.4:60860061-60860080 | MS.gene34845:intron | 45.0% | |
| GCAGCAGTTATTGGATTGAG+TGG | - | chr4.4:60859870-60859889 | MS.gene34845:CDS | 45.0% | |
| GCAGTTATTGGATTGAGTGG+AGG | - | chr4.4:60859873-60859892 | MS.gene34845:CDS | 45.0% | |
| GCCACCCTATAGAAAAAGCA+AGG | + | chr4.4:60861624-60861643 | None:intergenic | 45.0% | |
| GCTTGATTGGACTACTTCGT+GGG | - | chr4.4:60861642-60861661 | MS.gene34845:intron | 45.0% | |
| GTTGCAACTTGATCATCGGA+AGG | + | chr4.4:60861369-60861388 | None:intergenic | 45.0% | |
| TAAAACATGCCGCAAGGAAG+AGG | - | chr4.4:60864090-60864109 | MS.gene34845:CDS | 45.0% | |
| TAGAAAAAGCAAGGCGAGTG+CGG | + | chr4.4:60861615-60861634 | None:intergenic | 45.0% | |
| TCTACTGTCCTTGCATCCAT+CGG | + | chr4.4:60861841-60861860 | None:intergenic | 45.0% | |
| TCTCGACAAACCTATCCTGT+AGG | + | chr4.4:60864030-60864049 | None:intergenic | 45.0% | |
| TGAAATGGGTGACCTTGTTC+AGG | - | chr4.4:60861518-60861537 | MS.gene34845:intron | 45.0% | |
| TGATTCTGCTGCCTTTCAGA+TGG | + | chr4.4:60860053-60860072 | None:intergenic | 45.0% | |
| TGGATGCAAGGACAGTAGAT+GGG | - | chr4.4:60861842-60861861 | MS.gene34845:intron | 45.0% | |
| TTGTTCCGAATCAGCATGCA+CGG | + | chr4.4:60860114-60860133 | None:intergenic | 45.0% | |
| TTTGCTGCAGAAGTCGATGT+TGG | - | chr4.4:60860208-60860227 | MS.gene34845:intron | 45.0% | |
| ! | ATTGGTGGATACGACAGGTA+AGG | - | chr4.4:60861714-60861733 | MS.gene34845:CDS | 45.0% |
| ! | GACTCTCGTGTTATTCCTAC+AGG | - | chr4.4:60864012-60864031 | MS.gene34845:CDS | 45.0% |
| ! | TCACTTGGTGAGAGAAGACT+TGG | - | chr4.4:60863150-60863169 | MS.gene34845:intron | 45.0% |
| !! | AGGAGGAAGTTGATACTGTG+TGG | + | chr4.4:60859976-60859995 | None:intergenic | 45.0% |
| !! | TGCATGCTGATTCGGAACAA+TGG | - | chr4.4:60860114-60860133 | MS.gene34845:intron | 45.0% |
| !!! | GCCTTGCTTTTTCTATAGGG+TGG | - | chr4.4:60861620-60861639 | MS.gene34845:intron | 45.0% |
| CAAGCGTCTACTCCATTCCA+TGG | + | chr4.4:60862815-60862834 | None:intergenic | 50.0% | |
| CATGGAATGGAGTAGACGCT+TGG | - | chr4.4:60862813-60862832 | MS.gene34845:intron | 50.0% | |
| CCTGGAAGACCATTCAGAGA+GGG | + | chr4.4:60862609-60862628 | None:intergenic | 50.0% | |
| CGAGGAGAGAAAAGATACGG+AGG | - | chr4.4:60860279-60860298 | MS.gene34845:intron | 50.0% | |
| CTGGAAGACCATTCAGAGAG+GGG | + | chr4.4:60862608-60862627 | None:intergenic | 50.0% | |
| GGCTTGATTGGACTACTTCG+TGG | - | chr4.4:60861641-60861660 | MS.gene34845:intron | 50.0% | |
| GGGGAATGCTTCCCTATCTA+AGG | + | chr4.4:60862589-60862608 | None:intergenic | 50.0% | |
| TCCTGGAAGACCATTCAGAG+AGG | + | chr4.4:60862610-60862629 | None:intergenic | 50.0% | |
| TTCCATCTCCCTCTTCCTTG+CGG | + | chr4.4:60864102-60864121 | None:intergenic | 50.0% | |
| TTCTCTCTCGCGTTCCACAA+GGG | + | chr4.4:60863409-60863428 | None:intergenic | 50.0% | |
| TTCTGCTGCCTTTCAGATGG+TGG | + | chr4.4:60860050-60860069 | None:intergenic | 50.0% | |
| TTTCTCTCTCGCGTTCCACA+AGG | + | chr4.4:60863410-60863429 | None:intergenic | 50.0% | |
| ! | AGTAGACGCTTGGGCTCTAA+AGG | - | chr4.4:60862823-60862842 | MS.gene34845:intron | 50.0% |
| ! | GAAGCATTCCCCTCTCTGAA+TGG | - | chr4.4:60862597-60862616 | MS.gene34845:CDS | 50.0% |
| ! | TGCGGAGTGTTTGTCAACAG+AGG | + | chr4.4:60861597-60861616 | None:intergenic | 50.0% |
| !! | CTTGTTCTGGAGTGTCTGCA+AGG | - | chr4.4:60860315-60860334 | MS.gene34845:intron | 50.0% |
| !! | GCAAGTTGGACTTGTTGCGT+TGG | - | chr4.4:60864061-60864080 | MS.gene34845:CDS | 50.0% |
| ACGCTGTGATGAGTGTCTCC+TGG | + | chr4.4:60862627-60862646 | None:intergenic | 55.0% | |
| CCCTCTCTGAATGGTCTTCC+AGG | - | chr4.4:60862606-60862625 | MS.gene34845:CDS | 55.0% | |
| GTTCTGCAGTGATGCAGCTG+AGG | - | chr4.4:60860381-60860400 | MS.gene34845:intron | 55.0% | |
| TGCCCGCTCATTTGCATGAG+AGG | - | chr4.4:60862239-60862258 | MS.gene34845:intron | 55.0% | |
| ! | TAGCGCCGTGCATGCTGATT+CGG | - | chr4.4:60860106-60860125 | MS.gene34845:intron | 55.0% |
| TGCCGCAAGGAAGAGGGAGA+TGG | - | chr4.4:60864097-60864116 | MS.gene34845:CDS | 60.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr4.4 | gene | 60859861 | 60864142 | 60859861 | ID=MS.gene34845 |
| chr4.4 | mRNA | 60859861 | 60864142 | 60859861 | ID=MS.gene34845.t1;Parent=MS.gene34845 |
| chr4.4 | exon | 60863454 | 60864142 | 60863454 | ID=MS.gene34845.t1.exon1;Parent=MS.gene34845.t1 |
| chr4.4 | CDS | 60863454 | 60864142 | 60863454 | ID=cds.MS.gene34845.t1;Parent=MS.gene34845.t1 |
| chr4.4 | exon | 60862464 | 60862662 | 60862464 | ID=MS.gene34845.t1.exon2;Parent=MS.gene34845.t1 |
| chr4.4 | CDS | 60862464 | 60862662 | 60862464 | ID=cds.MS.gene34845.t1;Parent=MS.gene34845.t1 |
| chr4.4 | exon | 60862273 | 60862365 | 60862273 | ID=MS.gene34845.t1.exon3;Parent=MS.gene34845.t1 |
| chr4.4 | CDS | 60862273 | 60862365 | 60862273 | ID=cds.MS.gene34845.t1;Parent=MS.gene34845.t1 |
| chr4.4 | exon | 60861679 | 60861807 | 60861679 | ID=MS.gene34845.t1.exon4;Parent=MS.gene34845.t1 |
| chr4.4 | CDS | 60861679 | 60861807 | 60861679 | ID=cds.MS.gene34845.t1;Parent=MS.gene34845.t1 |
| chr4.4 | exon | 60861536 | 60861589 | 60861536 | ID=MS.gene34845.t1.exon5;Parent=MS.gene34845.t1 |
| chr4.4 | CDS | 60861536 | 60861589 | 60861536 | ID=cds.MS.gene34845.t1;Parent=MS.gene34845.t1 |
| chr4.4 | exon | 60861359 | 60861436 | 60861359 | ID=MS.gene34845.t1.exon6;Parent=MS.gene34845.t1 |
| chr4.4 | CDS | 60861359 | 60861436 | 60861359 | ID=cds.MS.gene34845.t1;Parent=MS.gene34845.t1 |
| chr4.4 | exon | 60861159 | 60861221 | 60861159 | ID=MS.gene34845.t1.exon7;Parent=MS.gene34845.t1 |
| chr4.4 | CDS | 60861159 | 60861221 | 60861159 | ID=cds.MS.gene34845.t1;Parent=MS.gene34845.t1 |
| chr4.4 | exon | 60860513 | 60860625 | 60860513 | ID=MS.gene34845.t1.exon8;Parent=MS.gene34845.t1 |
| chr4.4 | CDS | 60860513 | 60860625 | 60860513 | ID=cds.MS.gene34845.t1;Parent=MS.gene34845.t1 |
| chr4.4 | exon | 60859861 | 60859969 | 60859861 | ID=MS.gene34845.t1.exon9;Parent=MS.gene34845.t1 |
| chr4.4 | CDS | 60859861 | 60859969 | 60859861 | ID=cds.MS.gene34845.t1;Parent=MS.gene34845.t1 |
| Gene Sequence |
| Protein sequence |
