Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene58500.t1 | XP_013443853.1 | 97.4 | 342 | 8 | 1 | 1 | 341 | 147 | 488 | 2.20E-197 | 698 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene58500.t1 | A0A072TM35 | 97.4 | 342 | 8 | 1 | 1 | 341 | 147 | 488 | 1.6e-197 | 698.0 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| MS.gene049150 | MS.gene58500 | 0.846267 | 2.42E-59 | -1.69E-46 |
| MS.gene049151 | MS.gene58500 | 0.81683 | 4.52E-52 | -1.69E-46 |
| MS.gene049153 | MS.gene58500 | 0.842637 | 2.29E-58 | -1.69E-46 |
| MS.gene049260 | MS.gene58500 | 0.84079 | 7.03E-58 | -1.69E-46 |
| MS.gene049284 | MS.gene58500 | 0.804173 | 2.45E-49 | -1.69E-46 |
| MS.gene04933 | MS.gene58500 | 0.809933 | 1.48E-50 | -1.69E-46 |
| MS.gene049346 | MS.gene58500 | 0.852316 | 5.00E-61 | -1.69E-46 |
| MS.gene049351 | MS.gene58500 | 0.873462 | 1.44E-67 | -1.69E-46 |
| MS.gene049356 | MS.gene58500 | 0.837086 | 6.40E-57 | -1.69E-46 |
| MS.gene049378 | MS.gene58500 | 0.800995 | 1.11E-48 | -1.69E-46 |
| MS.gene049389 | MS.gene58500 | 0.816473 | 5.43E-52 | -1.69E-46 |
| MS.gene049427 | MS.gene58500 | 0.813215 | 2.87E-51 | -1.69E-46 |
| MS.gene049491 | MS.gene58500 | 0.822229 | 2.65E-53 | -1.69E-46 |
| MS.gene049599 | MS.gene58500 | -0.834914 | 2.28E-56 | -1.69E-46 |
| MS.gene049661 | MS.gene58500 | 0.866384 | 2.96E-65 | -1.69E-46 |
| MS.gene049662 | MS.gene58500 | 0.869608 | 2.73E-66 | -1.69E-46 |
| MS.gene049758 | MS.gene58500 | 0.915023 | 9.63E-85 | -1.69E-46 |
| MS.gene049910 | MS.gene58500 | 0.848134 | 7.44E-60 | -1.69E-46 |
| MS.gene049915 | MS.gene58500 | 0.817759 | 2.79E-52 | -1.69E-46 |
| MS.gene050076 | MS.gene58500 | 0.846714 | 1.83E-59 | -1.69E-46 |
| MS.gene050099 | MS.gene58500 | 0.83431 | 3.23E-56 | -1.69E-46 |
| MS.gene050128 | MS.gene58500 | 0.859188 | 4.91E-63 | -1.69E-46 |
| MS.gene050168 | MS.gene58500 | 0.800275 | 1.56E-48 | -1.69E-46 |
| MS.gene050301 | MS.gene58500 | 0.925627 | 1.42E-90 | -1.69E-46 |
| MS.gene050330 | MS.gene58500 | -0.815536 | 8.79E-52 | -1.69E-46 |
| MS.gene050397 | MS.gene58500 | 0.864906 | 8.68E-65 | -1.69E-46 |
| MS.gene050404 | MS.gene58500 | 0.832083 | 1.16E-55 | -1.69E-46 |
| MS.gene050406 | MS.gene58500 | 0.851973 | 6.26E-61 | -1.69E-46 |
| MS.gene050426 | MS.gene58500 | -0.814893 | 1.22E-51 | -1.69E-46 |
| MS.gene050432 | MS.gene58500 | 0.867602 | 1.21E-65 | -1.69E-46 |
| MS.gene050464 | MS.gene58500 | 0.849729 | 2.68E-60 | -1.69E-46 |
| MS.gene050529 | MS.gene58500 | 0.876038 | 1.92E-68 | -1.69E-46 |
| MS.gene050558 | MS.gene58500 | 0.857702 | 1.36E-62 | -1.69E-46 |
| MS.gene050642 | MS.gene58500 | 0.83989 | 1.21E-57 | -1.69E-46 |
| MS.gene050650 | MS.gene58500 | 0.805825 | 1.11E-49 | -1.69E-46 |
| MS.gene050670 | MS.gene58500 | 0.874592 | 5.99E-68 | -1.69E-46 |
| MS.gene050812 | MS.gene58500 | 0.834986 | 2.18E-56 | -1.69E-46 |
| MS.gene050820 | MS.gene58500 | 0.814109 | 1.82E-51 | -1.69E-46 |
| MS.gene050971 | MS.gene58500 | 0.803661 | 3.13E-49 | -1.69E-46 |
| MS.gene05101 | MS.gene58500 | 0.885533 | 7.49E-72 | -1.69E-46 |
| MS.gene05105 | MS.gene58500 | 0.852136 | 5.63E-61 | -1.69E-46 |
| MS.gene051171 | MS.gene58500 | 0.802228 | 6.20E-49 | -1.69E-46 |
| MS.gene05119 | MS.gene58500 | -0.846881 | 1.64E-59 | -1.69E-46 |
| MS.gene051360 | MS.gene58500 | 0.803016 | 4.26E-49 | -1.69E-46 |
| MS.gene051471 | MS.gene58500 | 0.877381 | 6.58E-69 | -1.69E-46 |
| MS.gene051525 | MS.gene58500 | 0.81845 | 1.95E-52 | -1.69E-46 |
| MS.gene051582 | MS.gene58500 | 0.865737 | 4.75E-65 | -1.69E-46 |
| MS.gene051662 | MS.gene58500 | 0.824025 | 1.01E-53 | -1.69E-46 |
| MS.gene051663 | MS.gene58500 | 0.851591 | 8.03E-61 | -1.69E-46 |
| MS.gene051860 | MS.gene58500 | 0.873801 | 1.11E-67 | -1.69E-46 |
| MS.gene051877 | MS.gene58500 | 0.812586 | 3.94E-51 | -1.69E-46 |
| MS.gene051983 | MS.gene58500 | 0.841286 | 5.21E-58 | -1.69E-46 |
| MS.gene052011 | MS.gene58500 | -0.843028 | 1.80E-58 | -1.69E-46 |
| MS.gene052077 | MS.gene58500 | 0.859109 | 5.19E-63 | -1.69E-46 |
| MS.gene052078 | MS.gene58500 | 0.889214 | 2.96E-73 | -1.69E-46 |
| MS.gene052178 | MS.gene58500 | 0.862044 | 6.70E-64 | -1.69E-46 |
| MS.gene052188 | MS.gene58500 | 0.913654 | 4.79E-84 | -1.69E-46 |
| MS.gene052207 | MS.gene58500 | 0.839789 | 1.28E-57 | -1.69E-46 |
| MS.gene052253 | MS.gene58500 | 0.902703 | 7.39E-79 | -1.69E-46 |
| MS.gene052255 | MS.gene58500 | 0.840614 | 7.82E-58 | -1.69E-46 |
| MS.gene052310 | MS.gene58500 | 0.88106 | 3.28E-70 | -1.69E-46 |
| MS.gene052322 | MS.gene58500 | 0.840996 | 6.21E-58 | -1.69E-46 |
| MS.gene052326 | MS.gene58500 | 0.850384 | 1.76E-60 | -1.69E-46 |
| MS.gene052340 | MS.gene58500 | 0.902623 | 8.02E-79 | -1.69E-46 |
| MS.gene052421 | MS.gene58500 | 0.816165 | 6.36E-52 | -1.69E-46 |
| MS.gene052481 | MS.gene58500 | 0.821682 | 3.55E-53 | -1.69E-46 |
| MS.gene052485 | MS.gene58500 | 0.861927 | 7.27E-64 | -1.69E-46 |
| MS.gene05316 | MS.gene58500 | 0.823809 | 1.13E-53 | -1.69E-46 |
| MS.gene053209 | MS.gene58500 | 0.893958 | 3.87E-75 | -1.69E-46 |
| MS.gene053557 | MS.gene58500 | 0.875924 | 2.10E-68 | -1.69E-46 |
| MS.gene053559 | MS.gene58500 | 0.810555 | 1.09E-50 | -1.69E-46 |
| MS.gene053758 | MS.gene58500 | 0.804848 | 1.77E-49 | -1.69E-46 |
| MS.gene053836 | MS.gene58500 | 0.920526 | 1.14E-87 | -1.69E-46 |
| MS.gene053907 | MS.gene58500 | 0.835166 | 1.97E-56 | -1.69E-46 |
| MS.gene053928 | MS.gene58500 | 0.868246 | 7.53E-66 | -1.69E-46 |
| MS.gene053971 | MS.gene58500 | 0.804381 | 2.22E-49 | -1.69E-46 |
| MS.gene054010 | MS.gene58500 | 0.8166 | 5.09E-52 | -1.69E-46 |
| MS.gene054011 | MS.gene58500 | 0.840175 | 1.02E-57 | -1.69E-46 |
| MS.gene054012 | MS.gene58500 | 0.826851 | 2.16E-54 | -1.69E-46 |
| MS.gene054013 | MS.gene58500 | 0.817245 | 3.65E-52 | -1.69E-46 |
| MS.gene054123 | MS.gene58500 | 0.889459 | 2.38E-73 | -1.69E-46 |
| MS.gene054183 | MS.gene58500 | 0.843042 | 1.79E-58 | -1.69E-46 |
| MS.gene054214 | MS.gene58500 | 0.807521 | 4.85E-50 | -1.69E-46 |
| MS.gene054349 | MS.gene58500 | 0.8435 | 1.35E-58 | -1.69E-46 |
| MS.gene054376 | MS.gene58500 | 0.810452 | 1.14E-50 | -1.69E-46 |
| MS.gene054473 | MS.gene58500 | 0.848545 | 5.73E-60 | -1.69E-46 |
| MS.gene054542 | MS.gene58500 | 0.801826 | 7.50E-49 | -1.69E-46 |
| MS.gene054556 | MS.gene58500 | 0.82115 | 4.71E-53 | -1.69E-46 |
| MS.gene05455 | MS.gene58500 | 0.847697 | 9.82E-60 | -1.69E-46 |
| MS.gene054930 | MS.gene58500 | 0.878449 | 2.78E-69 | -1.69E-46 |
| MS.gene054942 | MS.gene58500 | 0.813481 | 2.50E-51 | -1.69E-46 |
| MS.gene054955 | MS.gene58500 | 0.801452 | 8.95E-49 | -1.69E-46 |
| MS.gene054983 | MS.gene58500 | 0.840138 | 1.04E-57 | -1.69E-46 |
| MS.gene055116 | MS.gene58500 | 0.893982 | 3.78E-75 | -1.69E-46 |
| MS.gene055277 | MS.gene58500 | 0.902901 | 6.03E-79 | -1.69E-46 |
| MS.gene055303 | MS.gene58500 | 0.800246 | 1.58E-48 | -1.69E-46 |
| MS.gene055369 | MS.gene58500 | 0.801429 | 9.04E-49 | -1.69E-46 |
| MS.gene055390 | MS.gene58500 | 0.876034 | 1.92E-68 | -1.69E-46 |
| MS.gene055412 | MS.gene58500 | 0.843979 | 1.00E-58 | -1.69E-46 |
| MS.gene055422 | MS.gene58500 | 0.9171 | 8.01E-86 | -1.69E-46 |
| MS.gene055428 | MS.gene58500 | 0.892043 | 2.28E-74 | -1.69E-46 |
| MS.gene05553 | MS.gene58500 | 0.861339 | 1.10E-63 | -1.69E-46 |
| MS.gene055564 | MS.gene58500 | 0.820329 | 7.27E-53 | -1.69E-46 |
| MS.gene055604 | MS.gene58500 | 0.878124 | 3.62E-69 | -1.69E-46 |
| MS.gene055712 | MS.gene58500 | 0.837902 | 3.95E-57 | -1.69E-46 |
| MS.gene055859 | MS.gene58500 | 0.826802 | 2.22E-54 | -1.69E-46 |
| MS.gene055896 | MS.gene58500 | 0.804296 | 2.31E-49 | -1.69E-46 |
| MS.gene05602 | MS.gene58500 | 0.811122 | 8.20E-51 | -1.69E-46 |
| MS.gene056069 | MS.gene58500 | -0.805667 | 1.20E-49 | -1.69E-46 |
| MS.gene056191 | MS.gene58500 | 0.850614 | 1.52E-60 | -1.69E-46 |
| MS.gene056314 | MS.gene58500 | 0.804619 | 1.98E-49 | -1.69E-46 |
| MS.gene056407 | MS.gene58500 | 0.885526 | 7.54E-72 | -1.69E-46 |
| MS.gene056410 | MS.gene58500 | 0.828934 | 6.82E-55 | -1.69E-46 |
| MS.gene056451 | MS.gene58500 | 0.807638 | 4.58E-50 | -1.69E-46 |
| MS.gene056609 | MS.gene58500 | 0.853228 | 2.74E-61 | -1.69E-46 |
| MS.gene056612 | MS.gene58500 | 0.885607 | 7.03E-72 | -1.69E-46 |
| MS.gene056659 | MS.gene58500 | 0.884294 | 2.17E-71 | -1.69E-46 |
| MS.gene056723 | MS.gene58500 | 0.86625 | 3.27E-65 | -1.69E-46 |
| MS.gene056796 | MS.gene58500 | 0.842393 | 2.66E-58 | -1.69E-46 |
| MS.gene056899 | MS.gene58500 | -0.826807 | 2.21E-54 | -1.69E-46 |
| MS.gene056902 | MS.gene58500 | 0.827199 | 1.79E-54 | -1.69E-46 |
| MS.gene056979 | MS.gene58500 | 0.835316 | 1.80E-56 | -1.69E-46 |
| MS.gene057011 | MS.gene58500 | 0.810914 | 9.09E-51 | -1.69E-46 |
| MS.gene05702 | MS.gene58500 | 0.889427 | 2.45E-73 | -1.69E-46 |
| MS.gene057121 | MS.gene58500 | 0.903976 | 1.99E-79 | -1.69E-46 |
| MS.gene057124 | MS.gene58500 | 0.872599 | 2.81E-67 | -1.69E-46 |
| MS.gene057207 | MS.gene58500 | 0.839951 | 1.17E-57 | -1.69E-46 |
| MS.gene057245 | MS.gene58500 | 0.870601 | 1.29E-66 | -1.69E-46 |
| MS.gene057260 | MS.gene58500 | 0.819146 | 1.35E-52 | -1.69E-46 |
| MS.gene057295 | MS.gene58500 | 0.81111 | 8.25E-51 | -1.69E-46 |
| MS.gene05733 | MS.gene58500 | 0.83085 | 2.33E-55 | -1.69E-46 |
| MS.gene057396 | MS.gene58500 | 0.854018 | 1.63E-61 | -1.69E-46 |
| MS.gene057439 | MS.gene58500 | 0.858693 | 6.91E-63 | -1.69E-46 |
| MS.gene057448 | MS.gene58500 | 0.872839 | 2.34E-67 | -1.69E-46 |
| MS.gene057449 | MS.gene58500 | 0.854542 | 1.15E-61 | -1.69E-46 |
| MS.gene057450 | MS.gene58500 | 0.873368 | 1.55E-67 | -1.69E-46 |
| MS.gene057469 | MS.gene58500 | 0.837636 | 4.62E-57 | -1.69E-46 |
| MS.gene057749 | MS.gene58500 | 0.852482 | 4.48E-61 | -1.69E-46 |
| MS.gene057750 | MS.gene58500 | 0.80268 | 5.00E-49 | -1.69E-46 |
| MS.gene057754 | MS.gene58500 | 0.817745 | 2.81E-52 | -1.69E-46 |
| MS.gene057796 | MS.gene58500 | 0.804709 | 1.90E-49 | -1.69E-46 |
| MS.gene057823 | MS.gene58500 | 0.841917 | 3.55E-58 | -1.69E-46 |
| MS.gene057825 | MS.gene58500 | 0.806807 | 6.88E-50 | -1.69E-46 |
| MS.gene058002 | MS.gene58500 | 0.917375 | 5.73E-86 | -1.69E-46 |
| MS.gene058007 | MS.gene58500 | 0.807276 | 5.47E-50 | -1.69E-46 |
| MS.gene058082 | MS.gene58500 | 0.862196 | 6.02E-64 | -1.69E-46 |
| MS.gene05811 | MS.gene58500 | 0.89779 | 9.99E-77 | -1.69E-46 |
| MS.gene058142 | MS.gene58500 | 0.890723 | 7.62E-74 | -1.69E-46 |
| MS.gene058233 | MS.gene58500 | 0.866823 | 2.15E-65 | -1.69E-46 |
| MS.gene058276 | MS.gene58500 | 0.870994 | 9.58E-67 | -1.69E-46 |
| MS.gene058293 | MS.gene58500 | 0.87274 | 2.52E-67 | -1.69E-46 |
| MS.gene058365 | MS.gene58500 | 0.887137 | 1.86E-72 | -1.69E-46 |
| MS.gene05842 | MS.gene58500 | 0.811585 | 6.50E-51 | -1.69E-46 |
| MS.gene058660 | MS.gene58500 | 0.895292 | 1.10E-75 | -1.69E-46 |
| MS.gene058710 | MS.gene58500 | 0.870015 | 2.01E-66 | -1.69E-46 |
| MS.gene058749 | MS.gene58500 | 0.85709 | 2.07E-62 | -1.69E-46 |
| MS.gene058787 | MS.gene58500 | 0.845804 | 3.23E-59 | -1.69E-46 |
| MS.gene058833 | MS.gene58500 | 0.817423 | 3.32E-52 | -1.69E-46 |
| MS.gene058845 | MS.gene58500 | 0.858529 | 7.74E-63 | -1.69E-46 |
| MS.gene05886 | MS.gene58500 | 0.874478 | 6.55E-68 | -1.69E-46 |
| MS.gene058928 | MS.gene58500 | 0.854789 | 9.74E-62 | -1.69E-46 |
| MS.gene058948 | MS.gene58500 | 0.806701 | 7.24E-50 | -1.69E-46 |
| MS.gene058949 | MS.gene58500 | 0.838162 | 3.39E-57 | -1.69E-46 |
| MS.gene058993 | MS.gene58500 | 0.805577 | 1.25E-49 | -1.69E-46 |
| MS.gene059011 | MS.gene58500 | 0.820279 | 7.46E-53 | -1.69E-46 |
| MS.gene05907 | MS.gene58500 | 0.883279 | 5.13E-71 | -1.69E-46 |
| MS.gene059141 | MS.gene58500 | 0.816778 | 4.64E-52 | -1.69E-46 |
| MS.gene059247 | MS.gene58500 | 0.814399 | 1.57E-51 | -1.69E-46 |
| MS.gene059285 | MS.gene58500 | 0.866356 | 3.03E-65 | -1.69E-46 |
| MS.gene059294 | MS.gene58500 | 0.827682 | 1.37E-54 | -1.69E-46 |
| MS.gene059326 | MS.gene58500 | 0.806104 | 9.67E-50 | -1.69E-46 |
| MS.gene059342 | MS.gene58500 | 0.828443 | 8.96E-55 | -1.69E-46 |
| MS.gene059366 | MS.gene58500 | 0.823341 | 1.46E-53 | -1.69E-46 |
| MS.gene059420 | MS.gene58500 | 0.868687 | 5.43E-66 | -1.69E-46 |
| MS.gene059462 | MS.gene58500 | 0.808648 | 2.79E-50 | -1.69E-46 |
| MS.gene059518 | MS.gene58500 | 0.879227 | 1.48E-69 | -1.69E-46 |
| MS.gene059597 | MS.gene58500 | 0.884316 | 2.13E-71 | -1.69E-46 |
| MS.gene05959 | MS.gene58500 | 0.838272 | 3.17E-57 | -1.69E-46 |
| MS.gene059676 | MS.gene58500 | 0.869752 | 2.45E-66 | -1.69E-46 |
| MS.gene059688 | MS.gene58500 | 0.903604 | 2.92E-79 | -1.69E-46 |
| MS.gene059692 | MS.gene58500 | 0.916559 | 1.54E-85 | -1.69E-46 |
| MS.gene059695 | MS.gene58500 | 0.91529 | 7.02E-85 | -1.69E-46 |
| MS.gene059708 | MS.gene58500 | 0.834469 | 2.94E-56 | -1.69E-46 |
| MS.gene05984 | MS.gene58500 | 0.903756 | 2.49E-79 | -1.69E-46 |
| MS.gene059894 | MS.gene58500 | 0.89375 | 4.70E-75 | -1.69E-46 |
| MS.gene059899 | MS.gene58500 | 0.851192 | 1.04E-60 | -1.69E-46 |
| MS.gene059960 | MS.gene58500 | 0.802476 | 5.51E-49 | -1.69E-46 |
| MS.gene059974 | MS.gene58500 | 0.819804 | 9.58E-53 | -1.69E-46 |
| MS.gene060005 | MS.gene58500 | 0.803069 | 4.16E-49 | -1.69E-46 |
| MS.gene060247 | MS.gene58500 | 0.814568 | 1.44E-51 | -1.69E-46 |
| MS.gene06037 | MS.gene58500 | 0.886617 | 2.93E-72 | -1.69E-46 |
| MS.gene060403 | MS.gene58500 | 0.835504 | 1.61E-56 | -1.69E-46 |
| MS.gene060407 | MS.gene58500 | 0.856883 | 2.38E-62 | -1.69E-46 |
| MS.gene060476 | MS.gene58500 | 0.830109 | 3.53E-55 | -1.69E-46 |
| MS.gene060495 | MS.gene58500 | 0.819652 | 1.04E-52 | -1.69E-46 |
| MS.gene060804 | MS.gene58500 | 0.8026 | 5.19E-49 | -1.69E-46 |
| MS.gene060837 | MS.gene58500 | 0.80345 | 3.47E-49 | -1.69E-46 |
| MS.gene06090 | MS.gene58500 | 0.824392 | 8.28E-54 | -1.69E-46 |
| MS.gene060986 | MS.gene58500 | 0.813661 | 2.29E-51 | -1.69E-46 |
| MS.gene061049 | MS.gene58500 | 0.921981 | 1.78E-88 | -1.69E-46 |
| MS.gene061051 | MS.gene58500 | -0.877856 | 4.49E-69 | -1.69E-46 |
| MS.gene061112 | MS.gene58500 | 0.815396 | 9.45E-52 | -1.69E-46 |
| MS.gene061154 | MS.gene58500 | 0.855136 | 7.72E-62 | -1.69E-46 |
| MS.gene061159 | MS.gene58500 | 0.832818 | 7.61E-56 | -1.69E-46 |
| MS.gene061265 | MS.gene58500 | 0.809376 | 1.95E-50 | -1.69E-46 |
PPI:
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene58500.t1 | MTR_8g007155 | 97.368 | 342 | 8 | 1 | 1 | 341 | 147 | 488 | 0.0 | 700 |
| MS.gene58500.t1 | MTR_8g007155 | 97.368 | 342 | 8 | 1 | 1 | 341 | 154 | 495 | 0.0 | 699 |
| MS.gene58500.t1 | MTR_8g007155 | 97.368 | 342 | 8 | 1 | 1 | 341 | 1 | 342 | 0.0 | 692 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene58500.t1 | AT2G44760 | 63.265 | 343 | 104 | 3 | 1 | 339 | 175 | 499 | 2.76e-156 | 447 |
Find 97 sgRNAs with CRISPR-Local
Find 155 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| AAATCCAAAGGAAGGTTAAT+TGG | 0.216672 | 8.4:-79595448 | MS.gene58500:CDS |
| ATCAGCGCTACTCCGGTCTA+TGG | 0.306706 | 8.4:-79593685 | MS.gene58500:CDS |
| GCGACGGCACTGCCTCTATA+CGG | 0.317264 | 8.4:+79595492 | None:intergenic |
| CATTTATGAATTCTATAGTA+TGG | 0.319358 | 8.4:+79594376 | None:intergenic |
| GTACATTTAAAACAGTGATA+TGG | 0.322051 | 8.4:-79593785 | MS.gene58500:intron |
| TGCAGGATGGATCTTATTCT+AGG | 0.335281 | 8.4:-79594987 | MS.gene58500:intron |
| CATACTATAGAATTCATAAA+TGG | 0.344839 | 8.4:-79594375 | MS.gene58500:CDS |
| ATCCACATAATTTATACATT+AGG | 0.348324 | 8.4:+79593337 | None:intergenic |
| GCACCCACTGAAATATTCAT+AGG | 0.369182 | 8.4:+79594961 | None:intergenic |
| TATGACCATTCTATGGCTTC+CGG | 0.376585 | 8.4:-79593530 | MS.gene58500:CDS |
| TCACCCAATTAACCTTCCTT+TGG | 0.377747 | 8.4:+79595444 | None:intergenic |
| CTTGTGATGGAAAGAGATTA+TGG | 0.389804 | 8.4:-79593424 | MS.gene58500:CDS |
| TTCTTGACACTTATTTCCAT+TGG | 0.410247 | 8.4:+79595545 | None:intergenic |
| ATGACCATTCTATGGCTTCC+GGG | 0.414312 | 8.4:-79593529 | MS.gene58500:CDS |
| TGCAGGATATGACCATTCTA+TGG | 0.418224 | 8.4:-79593537 | MS.gene58500:CDS |
| GGCATAGCTAAGAATGGTTC+CGG | 0.424612 | 8.4:-79595377 | MS.gene58500:CDS |
| CCAAAGTAGTTGGCACTATC+CGG | 0.442331 | 8.4:+79593580 | None:intergenic |
| ATGTTATGTTGATATCAATA+AGG | 0.445468 | 8.4:-79593497 | MS.gene58500:CDS |
| AATCCAAAGGAAGGTTAATT+GGG | 0.448257 | 8.4:-79595447 | MS.gene58500:CDS |
| TGGTTAAAGGCTGCCACAAA+AGG | 0.448879 | 8.4:-79594410 | MS.gene58500:CDS |
| CATGACCCTGTCAACTCTGA+TGG | 0.454717 | 8.4:+79593721 | None:intergenic |
| CCCTGTCAACTCTGATGGAT+TGG | 0.456022 | 8.4:+79593726 | None:intergenic |
| AGAGGCAGTGCCGTCGCATT+CGG | 0.457112 | 8.4:-79595486 | MS.gene58500:CDS |
| ACTTGTTCAAACTTGAAAGT+TGG | 0.459938 | 8.4:+79594910 | None:intergenic |
| TGTTGCGGCATTTCACCATA+AGG | 0.462205 | 8.4:+79595413 | None:intergenic |
| GATGTCATGGGCTGTGAACC+TGG | 0.464218 | 8.4:-79595242 | MS.gene58500:CDS |
| CCGGATAGTGCCAACTACTT+TGG | 0.466476 | 8.4:-79593580 | MS.gene58500:CDS |
| CACATAATTTATACATTAGG+TGG | 0.469527 | 8.4:+79593340 | None:intergenic |
| TCAGCGCTACTCCGGTCTAT+GGG | 0.470374 | 8.4:-79593684 | MS.gene58500:CDS |
| GGAGGAGAGGCTTGACATGC+AGG | 0.472665 | 8.4:-79593554 | MS.gene58500:CDS |
| CTATACTCTTTCCCGTATAG+AGG | 0.475509 | 8.4:-79595504 | MS.gene58500:CDS |
| CACTGCTGAAATGGAGCCAA+TGG | 0.477776 | 8.4:-79595561 | None:intergenic |
| TGCTGTGTATGAAGAGGAAT+GGG | 0.483464 | 8.4:-79594325 | MS.gene58500:CDS |
| TGGGTGACTTTGAATCCTTA+TGG | 0.484540 | 8.4:-79595428 | MS.gene58500:CDS |
| AAGTCAAAGGATTCAAATGT+AGG | 0.488900 | 8.4:+79595290 | None:intergenic |
| CTCCTCCTCGCCAAAGTAGT+TGG | 0.490934 | 8.4:+79593570 | None:intergenic |
| GCAGGATGGATCTTATTCTA+GGG | 0.494716 | 8.4:-79594986 | MS.gene58500:intron |
| GGAAATCAGAGATGAAGAGA+AGG | 0.496039 | 8.4:-79593372 | MS.gene58500:CDS |
| TTGTGATGGAAAGAGATTAT+GGG | 0.505191 | 8.4:-79593423 | MS.gene58500:CDS |
| GAAAGAGATTATGGGTTGGA+TGG | 0.505505 | 8.4:-79593415 | MS.gene58500:CDS |
| ACCAATCCATCAGAGTTGAC+AGG | 0.511162 | 8.4:-79593727 | MS.gene58500:CDS |
| GATCTTAAAGCTCCTATAGC+CGG | 0.517766 | 8.4:-79595353 | MS.gene58500:CDS |
| TTCTATGCATCGGAGTTGGC+TGG | 0.518081 | 8.4:-79593468 | MS.gene58500:CDS |
| CGACGGCACTGCCTCTATAC+GGG | 0.521684 | 8.4:+79595493 | None:intergenic |
| CCATTGTCTTCAACTTGTTG+CGG | 0.527673 | 8.4:+79595398 | None:intergenic |
| ACATAACATGTCACACCTCC+CGG | 0.529213 | 8.4:+79593511 | None:intergenic |
| ACTTCAAAGTAAACAAGGCC+AGG | 0.530340 | 8.4:+79595224 | None:intergenic |
| ATCTTAAAGCTCCTATAGCC+GGG | 0.530397 | 8.4:-79595352 | MS.gene58500:CDS |
| GACAATGGCATAGCTAAGAA+TGG | 0.533653 | 8.4:-79595383 | MS.gene58500:CDS |
| ACCTCCCGGAAGCCATAGAA+TGG | 0.535315 | 8.4:+79593525 | None:intergenic |
| GAAAACTTAAAGATGTGAGA+TGG | 0.535360 | 8.4:-79593393 | MS.gene58500:CDS |
| GAGACTAAAGCGGAAGAAGA+AGG | 0.536295 | 8.4:-79593658 | MS.gene58500:CDS |
| CATCAGAGTTGACAGGGTCA+TGG | 0.540108 | 8.4:-79593720 | MS.gene58500:CDS |
| GGTATTCTATGCATCGGAGT+TGG | 0.543166 | 8.4:-79593472 | MS.gene58500:CDS |
| CTTCAAGAAAAGTGATGTGA+TGG | 0.543502 | 8.4:-79595270 | MS.gene58500:CDS |
| GTACAGAAACTCTGAAGAAG+AGG | 0.545629 | 8.4:-79593609 | MS.gene58500:CDS |
| TTAGTCTCCTCCCCATAGAC+CGG | 0.546679 | 8.4:+79593673 | None:intergenic |
| GTCATCAACACAAGTAGGAC+TGG | 0.557404 | 8.4:+79594302 | None:intergenic |
| TATGTTGATATCAATAAGGA+TGG | 0.564472 | 8.4:-79593493 | MS.gene58500:CDS |
| CACCCACTGAAATATTCATA+GGG | 0.565047 | 8.4:+79594962 | None:intergenic |
| GTTGGCTGGTACTCTGATGA+AGG | 0.567557 | 8.4:-79593454 | MS.gene58500:CDS |
| CTTTGAAATCAGCGCTACTC+CGG | 0.574322 | 8.4:-79593692 | MS.gene58500:CDS |
| TCTTCAGAGTTTCTGTACAA+AGG | 0.577038 | 8.4:+79593614 | None:intergenic |
| CATAATCTCTTTCCATCACA+AGG | 0.578509 | 8.4:+79593425 | None:intergenic |
| TATAGGAGCTTTAAGATCAC+CGG | 0.582052 | 8.4:+79595358 | None:intergenic |
| TTGCTGTGTATGAAGAGGAA+TGG | 0.582897 | 8.4:-79594326 | MS.gene58500:CDS |
| ACTACTTTGGCGAGGAGGAG+AGG | 0.584851 | 8.4:-79593567 | MS.gene58500:CDS |
| AAAGAGTATAGCAGTCGTAA+AGG | 0.589911 | 8.4:+79595516 | None:intergenic |
| CGCTACTCCGGTCTATGGGG+AGG | 0.591916 | 8.4:-79593680 | MS.gene58500:CDS |
| TGAAGGAATCAACCTTGTGA+TGG | 0.594121 | 8.4:-79593437 | MS.gene58500:CDS |
| CCAATCCATCAGAGTTGACA+GGG | 0.594885 | 8.4:-79593726 | MS.gene58500:CDS |
| TACATCTCAAATCCAAAGGA+AGG | 0.595112 | 8.4:-79595456 | MS.gene58500:CDS |
| AAGGATGGTATTCTATGCAT+CGG | 0.599587 | 8.4:-79593478 | MS.gene58500:CDS |
| TGCCAACTACTTTGGCGAGG+AGG | 0.603070 | 8.4:-79593572 | MS.gene58500:CDS |
| AACGTACATCTCAAATCCAA+AGG | 0.605463 | 8.4:-79595460 | MS.gene58500:CDS |
| CTCATGTCATCAACACAAGT+AGG | 0.612339 | 8.4:+79594297 | None:intergenic |
| GGCCCTATGAATATTTCAGT+GGG | 0.617268 | 8.4:-79594964 | MS.gene58500:CDS |
| TCTGAAGAAGAGGAGCTCGC+CGG | 0.619209 | 8.4:-79593599 | MS.gene58500:CDS |
| CAGGATGGATCTTATTCTAG+GGG | 0.620220 | 8.4:-79594985 | MS.gene58500:CDS |
| TCTGTACAAAGGTAGACATA+CGG | 0.623226 | 8.4:+79593625 | None:intergenic |
| GGGCCCTATGAATATTTCAG+TGG | 0.628624 | 8.4:-79594965 | MS.gene58500:CDS |
| CAGCGCTACTCCGGTCTATG+GGG | 0.629844 | 8.4:-79593683 | MS.gene58500:CDS |
| GATGGAAAGAGATTATGGGT+TGG | 0.632791 | 8.4:-79593419 | MS.gene58500:CDS |
| AATCAGAGATGAAGAGAAGG+TGG | 0.636071 | 8.4:-79593369 | MS.gene58500:CDS |
| TGTGATGGAAGAAGATGTCA+TGG | 0.637077 | 8.4:-79595255 | MS.gene58500:CDS |
| ACTATAGAATTCATAAATGG+CGG | 0.642562 | 8.4:-79594372 | MS.gene58500:CDS |
| TACTTACTTCAAAGTAAACA+AGG | 0.646661 | 8.4:+79595219 | None:intergenic |
| CCGCAACAAGTTGAAGACAA+TGG | 0.648696 | 8.4:-79595398 | MS.gene58500:CDS |
| GAGAGTTGCTGTGTATGAAG+AGG | 0.667649 | 8.4:-79594331 | MS.gene58500:CDS |
| CTATGGGGAGGAGACTAAAG+CGG | 0.670545 | 8.4:-79593668 | MS.gene58500:CDS |
| TAGTGCCAACTACTTTGGCG+AGG | 0.679262 | 8.4:-79593575 | MS.gene58500:CDS |
| CTACTTGTGTTGATGACATG+AGG | 0.683815 | 8.4:-79594296 | MS.gene58500:intron |
| GTACGTTCATCCGAATGCGA+CGG | 0.691972 | 8.4:+79595476 | None:intergenic |
| ACCATTCTATGGCTTCCGGG+AGG | 0.697610 | 8.4:-79593526 | MS.gene58500:CDS |
| ATTCTATAGTATGGACAATG+CGG | 0.711770 | 8.4:+79594385 | None:intergenic |
| GTGATGGAAGAAGATGTCAT+GGG | 0.752957 | 8.4:-79595254 | MS.gene58500:CDS |
| ACAAAGGTAGACATACGGAG+CGG | 0.804538 | 8.4:+79593630 | None:intergenic |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | ATATCTTATTGTTAATTATT+AGG | + | chr8.4:79595001-79595020 | None:intergenic | 10.0% |
| !! | AACAAATATGTTTATATTAC+CGG | + | chr8.4:79594103-79594122 | None:intergenic | 15.0% |
| !! | AATAACTTTATTGAAATCAA+TGG | + | chr8.4:79595086-79595105 | None:intergenic | 15.0% |
| !! | AGTTATTTACAAATGATAAA+AGG | + | chr8.4:79593879-79593898 | None:intergenic | 15.0% |
| !!! | AAAATTAAAATTTGCTTCTA+CGG | - | chr8.4:79594229-79594248 | MS.gene58500:intron | 15.0% |
| !!! | AGAAGCAAATTTTAATTTTA+TGG | + | chr8.4:79594228-79594247 | None:intergenic | 15.0% |
| !!! | ATAAAATTTATGTTTTCTGT+TGG | - | chr8.4:79594313-79594332 | MS.gene58500:CDS | 15.0% |
| !! | AATGAAATGATAAATAGTGA+AGG | - | chr8.4:79594740-79594759 | MS.gene58500:intron | 20.0% |
| !! | AGCTACAAAATAAATACATT+AGG | + | chr8.4:79593722-79593741 | None:intergenic | 20.0% |
| !! | ATGAAATGATAAATAGTGAA+GGG | - | chr8.4:79594741-79594760 | MS.gene58500:intron | 20.0% |
| !! | ATGTTATGTTGATATCAATA+AGG | - | chr8.4:79595402-79595421 | MS.gene58500:CDS | 20.0% |
| !! | CATACTATAGAATTCATAAA+TGG | - | chr8.4:79594524-79594543 | MS.gene58500:intron | 20.0% |
| !! | CATTTATGAATTCTATAGTA+TGG | + | chr8.4:79594526-79594545 | None:intergenic | 20.0% |
| !! | GGTAATATAAACATATTTGT+TGG | - | chr8.4:79594102-79594121 | MS.gene58500:intron | 20.0% |
| !! | TTTAGCACAAAATGTAAATA+AGG | + | chr8.4:79594637-79594656 | None:intergenic | 20.0% |
| !!! | AATTTTAATTTTATGGCATG+CGG | + | chr8.4:79594221-79594240 | None:intergenic | 20.0% |
| !!! | GTTTTAAAATAACAAATGCA+TGG | + | chr8.4:79594177-79594196 | None:intergenic | 20.0% |
| ! | AAAGAGAAAGAAACAATCAA+CGG | + | chr8.4:79593852-79593871 | None:intergenic | 25.0% |
| ! | AACTACATTTGATAAATTGC+AGG | - | chr8.4:79593895-79593914 | MS.gene58500:intron | 25.0% |
| ! | AACTTTATTGAAATCAATGG+AGG | + | chr8.4:79595083-79595102 | None:intergenic | 25.0% |
| ! | ACATAGTACTAAATGTAGTA+TGG | - | chr8.4:79594878-79594897 | MS.gene58500:intron | 25.0% |
| ! | ACTATAGAATTCATAAATGG+CGG | - | chr8.4:79594527-79594546 | MS.gene58500:intron | 25.0% |
| ! | TACTTACTTCAAAGTAAACA+AGG | + | chr8.4:79593683-79593702 | None:intergenic | 25.0% |
| ! | TATGTTGATATCAATAAGGA+TGG | - | chr8.4:79595406-79595425 | MS.gene58500:CDS | 25.0% |
| !! | AACGTAAATCTTTTCATACT+AGG | + | chr8.4:79595043-79595062 | None:intergenic | 25.0% |
| !! | ATAAACATATTTGTTGGTGT+TGG | - | chr8.4:79594108-79594127 | MS.gene58500:intron | 25.0% |
| !! | GTACATTTAAAACAGTGATA+TGG | - | chr8.4:79595114-79595133 | MS.gene58500:intron | 25.0% |
| !!! | ACGATTTGTTATTTTTTCAC+TGG | + | chr8.4:79593583-79593602 | None:intergenic | 25.0% |
| !!! | ATTTTAATTTTATGGCATGC+GGG | + | chr8.4:79594220-79594239 | None:intergenic | 25.0% |
| !!! | GTTCTTTTTCTTTGAGAAAA+TGG | + | chr8.4:79595154-79595173 | None:intergenic | 25.0% |
| AAATCCAAAGGAAGGTTAAT+TGG | - | chr8.4:79593451-79593470 | MS.gene58500:CDS | 30.0% | |
| AAGTCAAAGGATTCAAATGT+AGG | + | chr8.4:79593612-79593631 | None:intergenic | 30.0% | |
| AATCCAAAGGAAGGTTAATT+GGG | - | chr8.4:79593452-79593471 | MS.gene58500:CDS | 30.0% | |
| ACATTTGATAAATTGCAGGA+TGG | - | chr8.4:79593899-79593918 | MS.gene58500:intron | 30.0% | |
| ACTTGTTCAAACTTGAAAGT+TGG | + | chr8.4:79593992-79594011 | None:intergenic | 30.0% | |
| ATTCTATAGTATGGACAATG+CGG | + | chr8.4:79594517-79594536 | None:intergenic | 30.0% | |
| CACATAGCAAGAAAATCAAT+AGG | + | chr8.4:79594811-79594830 | None:intergenic | 30.0% | |
| GAAAACTTAAAGATGTGAGA+TGG | - | chr8.4:79595506-79595525 | MS.gene58500:CDS | 30.0% | |
| TCTCTGCAATAAATACTTGA+AGG | + | chr8.4:79594707-79594726 | None:intergenic | 30.0% | |
| TTCTTGACACTTATTTCCAT+TGG | + | chr8.4:79593357-79593376 | None:intergenic | 30.0% | |
| TTTGTTAGTGACTGAAGAAT+TGG | - | chr8.4:79593743-79593762 | MS.gene58500:CDS | 30.0% | |
| ! | GTGAGTACTTTTATCTAAAC+TGG | + | chr8.4:79594292-79594311 | None:intergenic | 30.0% |
| ! | TTGTGATGGAAAGAGATTAT+GGG | - | chr8.4:79595476-79595495 | MS.gene58500:CDS | 30.0% |
| ! | TTTTTCCAGTGTTTGGTTAA+AGG | - | chr8.4:79594476-79594495 | MS.gene58500:intron | 30.0% |
| !! | ATCACTTTTCTTGAAGTCAA+AGG | + | chr8.4:79593625-79593644 | None:intergenic | 30.0% |
| AACGTACATCTCAAATCCAA+AGG | - | chr8.4:79593439-79593458 | MS.gene58500:CDS | 35.0% | |
| AAGGATGGTATTCTATGCAT+CGG | - | chr8.4:79595421-79595440 | MS.gene58500:CDS | 35.0% | |
| ACAAATTCCATGCTTGAACA+AGG | + | chr8.4:79594370-79594389 | None:intergenic | 35.0% | |
| CACCCACTGAAATATTCATA+GGG | + | chr8.4:79593940-79593959 | None:intergenic | 35.0% | |
| CATAATCTCTTTCCATCACA+AGG | + | chr8.4:79595477-79595496 | None:intergenic | 35.0% | |
| CGGAACAAATGAAAATCGAT+TGG | - | chr8.4:79594249-79594268 | MS.gene58500:intron | 35.0% | |
| CTTCAAGAAAAGTGATGTGA+TGG | - | chr8.4:79593629-79593648 | MS.gene58500:CDS | 35.0% | |
| CTTCATCAATTCCTTTACTG+TGG | - | chr8.4:79594947-79594966 | MS.gene58500:CDS | 35.0% | |
| GAAGGAAAATACCACAGTAA+AGG | + | chr8.4:79594961-79594980 | None:intergenic | 35.0% | |
| GAATGACACTAAGATGATGA+AGG | + | chr8.4:79594979-79594998 | None:intergenic | 35.0% | |
| GTACTAAATGTAGTATGGCA+TGG | - | chr8.4:79594883-79594902 | MS.gene58500:intron | 35.0% | |
| TACATCTCAAATCCAAAGGA+AGG | - | chr8.4:79593443-79593462 | MS.gene58500:CDS | 35.0% | |
| TCTGTACAAAGGTAGACATA+CGG | + | chr8.4:79595277-79595296 | None:intergenic | 35.0% | |
| TCTTCAGAGTTTCTGTACAA+AGG | + | chr8.4:79595288-79595307 | None:intergenic | 35.0% | |
| TGATACTAACTCGTTGATAC+CGG | - | chr8.4:79594081-79594100 | MS.gene58500:intron | 35.0% | |
| TTGAATTCCTTGTTCAAGCA+TGG | - | chr8.4:79594360-79594379 | MS.gene58500:CDS | 35.0% | |
| ! | AAAGAGTATAGCAGTCGTAA+AGG | + | chr8.4:79593386-79593405 | None:intergenic | 35.0% |
| ! | ACTTCTCTTTTTCCAGTGTT+TGG | - | chr8.4:79594469-79594488 | MS.gene58500:intron | 35.0% |
| ! | CTTGTGATGGAAAGAGATTA+TGG | - | chr8.4:79595475-79595494 | MS.gene58500:CDS | 35.0% |
| !! | TATAGGAGCTTTAAGATCAC+CGG | + | chr8.4:79593544-79593563 | None:intergenic | 35.0% |
| AATCAGAGATGAAGAGAAGG+TGG | - | chr8.4:79595530-79595549 | MS.gene58500:CDS | 40.0% | |
| ACTTCAAAGTAAACAAGGCC+AGG | + | chr8.4:79593678-79593697 | None:intergenic | 40.0% | |
| AGTCTGTGTCATCGTTTCAT+AGG | + | chr8.4:79594061-79594080 | None:intergenic | 40.0% | |
| ATCTTAAAGCTCCTATAGCC+GGG | - | chr8.4:79593547-79593566 | MS.gene58500:CDS | 40.0% | |
| CAATCAACGGTAGTTTATGC+TGG | + | chr8.4:79593839-79593858 | None:intergenic | 40.0% | |
| CAGGATGGATCTTATTCTAG+GGG | - | chr8.4:79593914-79593933 | MS.gene58500:intron | 40.0% | |
| CTATACTCTTTCCCGTATAG+AGG | - | chr8.4:79593395-79593414 | MS.gene58500:CDS | 40.0% | |
| CTCATGTCATCAACACAAGT+AGG | + | chr8.4:79594605-79594624 | None:intergenic | 40.0% | |
| GACAATGGCATAGCTAAGAA+TGG | - | chr8.4:79593516-79593535 | MS.gene58500:CDS | 40.0% | |
| GATCTTAAAGCTCCTATAGC+CGG | - | chr8.4:79593546-79593565 | MS.gene58500:CDS | 40.0% | |
| GATGGAAAGAGATTATGGGT+TGG | - | chr8.4:79595480-79595499 | MS.gene58500:CDS | 40.0% | |
| GCACCCACTGAAATATTCAT+AGG | + | chr8.4:79593941-79593960 | None:intergenic | 40.0% | |
| GCAGGATGGATCTTATTCTA+GGG | - | chr8.4:79593913-79593932 | MS.gene58500:intron | 40.0% | |
| GGAAATCAGAGATGAAGAGA+AGG | - | chr8.4:79595527-79595546 | MS.gene58500:CDS | 40.0% | |
| GGCCCTATGAATATTTCAGT+GGG | - | chr8.4:79593935-79593954 | MS.gene58500:intron | 40.0% | |
| GTCTGTGTCATCGTTTCATA+GGG | + | chr8.4:79594060-79594079 | None:intergenic | 40.0% | |
| TAAGAACATGCACACACCAA+AGG | + | chr8.4:79594910-79594929 | None:intergenic | 40.0% | |
| TATGACCATTCTATGGCTTC+CGG | - | chr8.4:79595369-79595388 | MS.gene58500:CDS | 40.0% | |
| TCACCCAATTAACCTTCCTT+TGG | + | chr8.4:79593458-79593477 | None:intergenic | 40.0% | |
| TGAAGGAATCAACCTTGTGA+TGG | - | chr8.4:79595462-79595481 | MS.gene58500:CDS | 40.0% | |
| TGCAGGATATGACCATTCTA+TGG | - | chr8.4:79595362-79595381 | MS.gene58500:CDS | 40.0% | |
| TGCAGGATGGATCTTATTCT+AGG | - | chr8.4:79593912-79593931 | MS.gene58500:intron | 40.0% | |
| TGCTGTGTATGAAGAGGAAT+GGG | - | chr8.4:79594574-79594593 | MS.gene58500:intron | 40.0% | |
| TGGGTGACTTTGAATCCTTA+TGG | - | chr8.4:79593471-79593490 | MS.gene58500:CDS | 40.0% | |
| TTGCTGTGTATGAAGAGGAA+TGG | - | chr8.4:79594573-79594592 | MS.gene58500:intron | 40.0% | |
| ! | GTACAGAAACTCTGAAGAAG+AGG | - | chr8.4:79595290-79595309 | MS.gene58500:CDS | 40.0% |
| ! | GTGATGGAAGAAGATGTCAT+GGG | - | chr8.4:79593645-79593664 | MS.gene58500:CDS | 40.0% |
| ! | TGTGATGGAAGAAGATGTCA+TGG | - | chr8.4:79593644-79593663 | MS.gene58500:CDS | 40.0% |
| !! | CCATTGTCTTCAACTTGTTG+CGG | + | chr8.4:79593504-79593523 | None:intergenic | 40.0% |
| !! | CTACTTGTGTTGATGACATG+AGG | - | chr8.4:79594603-79594622 | MS.gene58500:intron | 40.0% |
| !! | GAAAGAGATTATGGGTTGGA+TGG | - | chr8.4:79595484-79595503 | MS.gene58500:CDS | 40.0% |
| !! | TATTTGTTGGTGTTGGACCT+CGG | - | chr8.4:79594115-79594134 | MS.gene58500:intron | 40.0% |
| ACAAAGGTAGACATACGGAG+CGG | + | chr8.4:79595272-79595291 | None:intergenic | 45.0% | |
| ACATAACATGTCACACCTCC+CGG | + | chr8.4:79595391-79595410 | None:intergenic | 45.0% | |
| ACCAATCCATCAGAGTTGAC+AGG | - | chr8.4:79595172-79595191 | MS.gene58500:intron | 45.0% | |
| ATGACCATTCTATGGCTTCC+GGG | - | chr8.4:79595370-79595389 | MS.gene58500:CDS | 45.0% | |
| CCAAAGTAGTTGGCACTATC+CGG | + | chr8.4:79595322-79595341 | None:intergenic | 45.0% | |
| CCAATCCATCAGAGTTGACA+GGG | - | chr8.4:79595173-79595192 | MS.gene58500:intron | 45.0% | |
| GAGACTAAAGCGGAAGAAGA+AGG | - | chr8.4:79595241-79595260 | MS.gene58500:CDS | 45.0% | |
| GAGAGTTGCTGTGTATGAAG+AGG | - | chr8.4:79594568-79594587 | MS.gene58500:intron | 45.0% | |
| GGCATAGCTAAGAATGGTTC+CGG | - | chr8.4:79593522-79593541 | MS.gene58500:CDS | 45.0% | |
| GGGCCCTATGAATATTTCAG+TGG | - | chr8.4:79593934-79593953 | MS.gene58500:intron | 45.0% | |
| GGTATTCTATGCATCGGAGT+TGG | - | chr8.4:79595427-79595446 | MS.gene58500:CDS | 45.0% | |
| GTCATCAACACAAGTAGGAC+TGG | + | chr8.4:79594600-79594619 | None:intergenic | 45.0% | |
| GTGTCATCGTTTCATAGGGA+AGG | + | chr8.4:79594056-79594075 | None:intergenic | 45.0% | |
| TGGTTAAAGGCTGCCACAAA+AGG | - | chr8.4:79594489-79594508 | MS.gene58500:intron | 45.0% | |
| TGTAGTATGGCATGGACCTT+TGG | - | chr8.4:79594891-79594910 | MS.gene58500:intron | 45.0% | |
| TGTTGCGGCATTTCACCATA+AGG | + | chr8.4:79593489-79593508 | None:intergenic | 45.0% | |
| ! | CCGCAACAAGTTGAAGACAA+TGG | - | chr8.4:79593501-79593520 | MS.gene58500:CDS | 45.0% |
| !! | CTTTGAAATCAGCGCTACTC+CGG | - | chr8.4:79595207-79595226 | MS.gene58500:intron | 45.0% |
| ATGGCATGCGGGAGAAAACT+GGG | + | chr8.4:79594209-79594228 | None:intergenic | 50.0% | |
| CATCAGAGTTGACAGGGTCA+TGG | - | chr8.4:79595179-79595198 | MS.gene58500:intron | 50.0% | |
| CATGACCCTGTCAACTCTGA+TGG | + | chr8.4:79595181-79595200 | None:intergenic | 50.0% | |
| CCGGATAGTGCCAACTACTT+TGG | - | chr8.4:79595319-79595338 | MS.gene58500:CDS | 50.0% | |
| CTATGGGGAGGAGACTAAAG+CGG | - | chr8.4:79595231-79595250 | MS.gene58500:CDS | 50.0% | |
| GGCAGCCTTTAACCAAACAC+TGG | + | chr8.4:79594484-79594503 | None:intergenic | 50.0% | |
| GTACGTTCATCCGAATGCGA+CGG | + | chr8.4:79593426-79593445 | None:intergenic | 50.0% | |
| GTTGCTACTGACACCACAGA+AGG | + | chr8.4:79594149-79594168 | None:intergenic | 50.0% | |
| GTTGGCTGGTACTCTGATGA+AGG | - | chr8.4:79595445-79595464 | MS.gene58500:CDS | 50.0% | |
| TAGTGCCAACTACTTTGGCG+AGG | - | chr8.4:79595324-79595343 | MS.gene58500:CDS | 50.0% | |
| TATGGCATGCGGGAGAAAAC+TGG | + | chr8.4:79594210-79594229 | None:intergenic | 50.0% | |
| TTAGTCTCCTCCCCATAGAC+CGG | + | chr8.4:79595229-79595248 | None:intergenic | 50.0% | |
| TTCTATGCATCGGAGTTGGC+TGG | - | chr8.4:79595431-79595450 | MS.gene58500:CDS | 50.0% | |
| ! | CCCTGTCAACTCTGATGGAT+TGG | + | chr8.4:79595176-79595195 | None:intergenic | 50.0% |
| ! | GGACAATGCGGATCCTTTTG+TGG | + | chr8.4:79594505-79594524 | None:intergenic | 50.0% |
| ! | TTCACTGGATTTTCGCAGCC+CGG | + | chr8.4:79593568-79593587 | None:intergenic | 50.0% |
| ACCATTCTATGGCTTCCGGG+AGG | - | chr8.4:79595373-79595392 | MS.gene58500:CDS | 55.0% | |
| ACCTCCCGGAAGCCATAGAA+TGG | + | chr8.4:79595377-79595396 | None:intergenic | 55.0% | |
| ACTACTTTGGCGAGGAGGAG+AGG | - | chr8.4:79595332-79595351 | MS.gene58500:CDS | 55.0% | |
| ATCAGCGCTACTCCGGTCTA+TGG | - | chr8.4:79595214-79595233 | MS.gene58500:intron | 55.0% | |
| ATGCGGGAGAAAACTGGGGA+GGG | + | chr8.4:79594204-79594223 | None:intergenic | 55.0% | |
| CTCCTCCTCGCCAAAGTAGT+TGG | + | chr8.4:79595332-79595351 | None:intergenic | 55.0% | |
| TCAGCGCTACTCCGGTCTAT+GGG | - | chr8.4:79595215-79595234 | MS.gene58500:intron | 55.0% | |
| TCTGAAGAAGAGGAGCTCGC+CGG | - | chr8.4:79595300-79595319 | MS.gene58500:CDS | 55.0% | |
| TGCCAACTACTTTGGCGAGG+AGG | - | chr8.4:79595327-79595346 | MS.gene58500:CDS | 55.0% | |
| TGGCATGCGGGAGAAAACTG+GGG | + | chr8.4:79594208-79594227 | None:intergenic | 55.0% | |
| ! | GATGTCATGGGCTGTGAACC+TGG | - | chr8.4:79593657-79593676 | MS.gene58500:CDS | 55.0% |
| ! | GATTTTCGCAGCCCGGCTAT+AGG | + | chr8.4:79593561-79593580 | None:intergenic | 55.0% |
| !! | TTGGTGTTGGACCTCGGACA+CGG | - | chr8.4:79594121-79594140 | MS.gene58500:intron | 55.0% |
| AGAGGCAGTGCCGTCGCATT+CGG | - | chr8.4:79593413-79593432 | MS.gene58500:CDS | 60.0% | |
| CACAGAAGGATCCGTGTCCG+AGG | + | chr8.4:79594135-79594154 | None:intergenic | 60.0% | |
| CAGCGCTACTCCGGTCTATG+GGG | - | chr8.4:79595216-79595235 | MS.gene58500:intron | 60.0% | |
| CATGCGGGAGAAAACTGGGG+AGG | + | chr8.4:79594205-79594224 | None:intergenic | 60.0% | |
| CGACGGCACTGCCTCTATAC+GGG | + | chr8.4:79593409-79593428 | None:intergenic | 60.0% | |
| CTCGGACACGGATCCTTCTG+TGG | - | chr8.4:79594133-79594152 | MS.gene58500:intron | 60.0% | |
| GCGACGGCACTGCCTCTATA+CGG | + | chr8.4:79593410-79593429 | None:intergenic | 60.0% | |
| GGAGGAGAGGCTTGACATGC+AGG | - | chr8.4:79595345-79595364 | MS.gene58500:CDS | 60.0% | |
| TGCGGGAGAAAACTGGGGAG+GGG | + | chr8.4:79594203-79594222 | None:intergenic | 60.0% | |
| CGCTACTCCGGTCTATGGGG+AGG | - | chr8.4:79595219-79595238 | MS.gene58500:intron | 65.0% | |
| GCGGGAGAAAACTGGGGAGG+GGG | + | chr8.4:79594202-79594221 | None:intergenic | 65.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr8.4 | gene | 79593348 | 79595573 | 79593348 | ID=MS.gene58500 |
| chr8.4 | mRNA | 79593348 | 79595573 | 79593348 | ID=MS.gene58500.t1;Parent=MS.gene58500 |
| chr8.4 | exon | 79595226 | 79595573 | 79595226 | ID=MS.gene58500.t1.exon1;Parent=MS.gene58500.t1 |
| chr8.4 | CDS | 79595226 | 79595573 | 79595226 | ID=cds.MS.gene58500.t1;Parent=MS.gene58500.t1 |
| chr8.4 | exon | 79594912 | 79595004 | 79594912 | ID=MS.gene58500.t1.exon2;Parent=MS.gene58500.t1 |
| chr8.4 | CDS | 79594912 | 79595004 | 79594912 | ID=cds.MS.gene58500.t1;Parent=MS.gene58500.t1 |
| chr8.4 | exon | 79594297 | 79594436 | 79594297 | ID=MS.gene58500.t1.exon3;Parent=MS.gene58500.t1 |
| chr8.4 | CDS | 79594297 | 79594436 | 79594297 | ID=cds.MS.gene58500.t1;Parent=MS.gene58500.t1 |
| chr8.4 | exon | 79593348 | 79593792 | 79593348 | ID=MS.gene58500.t1.exon4;Parent=MS.gene58500.t1 |
| chr8.4 | CDS | 79593348 | 79593792 | 79593348 | ID=cds.MS.gene58500.t1;Parent=MS.gene58500.t1 |
| Gene Sequence |
| Protein sequence |
