Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene069859.t1 | XP_003597703.1 | 96.3 | 191 | 7 | 0 | 1 | 191 | 1 | 191 | 6.30E-101 | 376.7 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene069859.t1 | Q9LU21 | 64.1 | 181 | 52 | 5 | 18 | 186 | 20 | 199 | 3.7e-57 | 222.6 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene069859.t1 | G7IUN0 | 96.3 | 191 | 7 | 0 | 1 | 191 | 1 | 191 | 4.6e-101 | 376.7 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| MS.gene049137 | MS.gene069859 | 0.821619 | 3.67E-53 | -1.69E-46 |
| MS.gene049346 | MS.gene069859 | 0.840605 | 7.86E-58 | -1.69E-46 |
| MS.gene049351 | MS.gene069859 | 0.842161 | 3.06E-58 | -1.69E-46 |
| MS.gene049356 | MS.gene069859 | 0.825705 | 4.05E-54 | -1.69E-46 |
| MS.gene049427 | MS.gene069859 | 0.855068 | 8.08E-62 | -1.69E-46 |
| MS.gene049491 | MS.gene069859 | 0.822053 | 2.91E-53 | -1.69E-46 |
| MS.gene049609 | MS.gene069859 | 0.819816 | 9.52E-53 | -1.69E-46 |
| MS.gene049661 | MS.gene069859 | 0.894963 | 1.50E-75 | -1.69E-46 |
| MS.gene049662 | MS.gene069859 | 0.893721 | 4.83E-75 | -1.69E-46 |
| MS.gene049681 | MS.gene069859 | 0.812628 | 3.85E-51 | -1.69E-46 |
| MS.gene049758 | MS.gene069859 | 0.822706 | 2.05E-53 | -1.69E-46 |
| MS.gene049805 | MS.gene069859 | 0.80225 | 6.13E-49 | -1.69E-46 |
| MS.gene049910 | MS.gene069859 | 0.823029 | 1.73E-53 | -1.69E-46 |
| MS.gene050076 | MS.gene069859 | 0.849396 | 3.32E-60 | -1.69E-46 |
| MS.gene050231 | MS.gene069859 | 0.810952 | 8.92E-51 | -1.69E-46 |
| MS.gene050301 | MS.gene069859 | 0.887126 | 1.88E-72 | -1.69E-46 |
| MS.gene050397 | MS.gene069859 | 0.863524 | 2.34E-64 | -1.69E-46 |
| MS.gene050404 | MS.gene069859 | 0.843616 | 1.26E-58 | -1.69E-46 |
| MS.gene050406 | MS.gene069859 | 0.850504 | 1.63E-60 | -1.69E-46 |
| MS.gene050432 | MS.gene069859 | 0.863946 | 1.73E-64 | -1.69E-46 |
| MS.gene050464 | MS.gene069859 | 0.844083 | 9.42E-59 | -1.69E-46 |
| MS.gene050529 | MS.gene069859 | 0.874513 | 6.37E-68 | -1.69E-46 |
| MS.gene05053 | MS.gene069859 | 0.814665 | 1.37E-51 | -1.69E-46 |
| MS.gene050593 | MS.gene069859 | 0.817994 | 2.47E-52 | -1.69E-46 |
| MS.gene050670 | MS.gene069859 | 0.889366 | 2.58E-73 | -1.69E-46 |
| MS.gene050767 | MS.gene069859 | 0.81077 | 9.77E-51 | -1.69E-46 |
| MS.gene050770 | MS.gene069859 | 0.812912 | 3.34E-51 | -1.69E-46 |
| MS.gene050772 | MS.gene069859 | 0.801529 | 8.63E-49 | -1.69E-46 |
| MS.gene050783 | MS.gene069859 | 0.832658 | 8.34E-56 | -1.69E-46 |
| MS.gene050812 | MS.gene069859 | 0.834314 | 3.22E-56 | -1.69E-46 |
| MS.gene05101 | MS.gene069859 | 0.885449 | 8.05E-72 | -1.69E-46 |
| MS.gene05105 | MS.gene069859 | 0.917706 | 3.83E-86 | -1.69E-46 |
| MS.gene051255 | MS.gene069859 | 0.803404 | 3.54E-49 | -1.69E-46 |
| MS.gene051387 | MS.gene069859 | 0.8348 | 2.43E-56 | -1.69E-46 |
| MS.gene051471 | MS.gene069859 | 0.832604 | 8.60E-56 | -1.69E-46 |
| MS.gene051525 | MS.gene069859 | 0.842638 | 2.29E-58 | -1.69E-46 |
| MS.gene051582 | MS.gene069859 | 0.867818 | 1.03E-65 | -1.69E-46 |
| MS.gene051605 | MS.gene069859 | 0.844913 | 5.63E-59 | -1.69E-46 |
| MS.gene051666 | MS.gene069859 | 0.822154 | 2.76E-53 | -1.69E-46 |
| MS.gene051860 | MS.gene069859 | 0.816585 | 5.13E-52 | -1.69E-46 |
| MS.gene051877 | MS.gene069859 | 0.830309 | 3.16E-55 | -1.69E-46 |
| MS.gene052011 | MS.gene069859 | -0.841202 | 5.48E-58 | -1.69E-46 |
| MS.gene052077 | MS.gene069859 | 0.819513 | 1.12E-52 | -1.69E-46 |
| MS.gene052078 | MS.gene069859 | 0.852929 | 3.34E-61 | -1.69E-46 |
| MS.gene052134 | MS.gene069859 | 0.805284 | 1.44E-49 | -1.69E-46 |
| MS.gene052135 | MS.gene069859 | 0.815687 | 8.14E-52 | -1.69E-46 |
| MS.gene052178 | MS.gene069859 | 0.813372 | 2.65E-51 | -1.69E-46 |
| MS.gene052188 | MS.gene069859 | 0.87865 | 2.37E-69 | -1.69E-46 |
| MS.gene052207 | MS.gene069859 | 0.809324 | 2.00E-50 | -1.69E-46 |
| MS.gene052253 | MS.gene069859 | 0.893451 | 6.21E-75 | -1.69E-46 |
| MS.gene052310 | MS.gene069859 | 0.897989 | 8.23E-77 | -1.69E-46 |
| MS.gene052322 | MS.gene069859 | 0.833602 | 4.85E-56 | -1.69E-46 |
| MS.gene052326 | MS.gene069859 | 0.824678 | 7.09E-54 | -1.69E-46 |
| MS.gene052340 | MS.gene069859 | 0.87709 | 8.31E-69 | -1.69E-46 |
| MS.gene052414 | MS.gene069859 | 0.821529 | 3.85E-53 | -1.69E-46 |
| MS.gene052421 | MS.gene069859 | 0.858696 | 6.90E-63 | -1.69E-46 |
| MS.gene052481 | MS.gene069859 | 0.862087 | 6.50E-64 | -1.69E-46 |
| MS.gene052484 | MS.gene069859 | 0.819719 | 1.00E-52 | -1.69E-46 |
| MS.gene052485 | MS.gene069859 | 0.865559 | 5.41E-65 | -1.69E-46 |
| MS.gene052501 | MS.gene069859 | 0.810674 | 1.02E-50 | -1.69E-46 |
| MS.gene052505 | MS.gene069859 | 0.833099 | 6.48E-56 | -1.69E-46 |
| MS.gene052767 | MS.gene069859 | 0.811299 | 7.51E-51 | -1.69E-46 |
| MS.gene052982 | MS.gene069859 | 0.845457 | 4.01E-59 | -1.69E-46 |
| MS.gene053103 | MS.gene069859 | 0.831448 | 1.66E-55 | -1.69E-46 |
| MS.gene053104 | MS.gene069859 | 0.809627 | 1.72E-50 | -1.69E-46 |
| MS.gene053209 | MS.gene069859 | 0.864015 | 1.65E-64 | -1.69E-46 |
| MS.gene053322 | MS.gene069859 | 0.824079 | 9.80E-54 | -1.69E-46 |
| MS.gene053557 | MS.gene069859 | 0.837133 | 6.22E-57 | -1.69E-46 |
| MS.gene053574 | MS.gene069859 | 0.80234 | 5.88E-49 | -1.69E-46 |
| MS.gene053758 | MS.gene069859 | 0.828645 | 8.01E-55 | -1.69E-46 |
| MS.gene053813 | MS.gene069859 | 0.804051 | 2.60E-49 | -1.69E-46 |
| MS.gene053836 | MS.gene069859 | 0.865408 | 6.03E-65 | -1.69E-46 |
| MS.gene053928 | MS.gene069859 | 0.80657 | 7.72E-50 | -1.69E-46 |
| MS.gene053971 | MS.gene069859 | 0.812431 | 4.25E-51 | -1.69E-46 |
| MS.gene054010 | MS.gene069859 | 0.805149 | 1.53E-49 | -1.69E-46 |
| MS.gene054011 | MS.gene069859 | 0.82488 | 6.35E-54 | -1.69E-46 |
| MS.gene054012 | MS.gene069859 | 0.811655 | 6.28E-51 | -1.69E-46 |
| MS.gene054013 | MS.gene069859 | 0.809435 | 1.90E-50 | -1.69E-46 |
| MS.gene054123 | MS.gene069859 | 0.824549 | 7.60E-54 | -1.69E-46 |
| MS.gene05413 | MS.gene069859 | 0.826634 | 2.44E-54 | -1.69E-46 |
| MS.gene054183 | MS.gene069859 | 0.827154 | 1.83E-54 | -1.69E-46 |
| MS.gene054349 | MS.gene069859 | 0.836359 | 9.80E-57 | -1.69E-46 |
| MS.gene054376 | MS.gene069859 | 0.834919 | 2.27E-56 | -1.69E-46 |
| MS.gene054473 | MS.gene069859 | 0.830558 | 2.75E-55 | -1.69E-46 |
| MS.gene05455 | MS.gene069859 | 0.817828 | 2.69E-52 | -1.69E-46 |
| MS.gene054719 | MS.gene069859 | 0.827509 | 1.50E-54 | -1.69E-46 |
| MS.gene054802 | MS.gene069859 | 0.821142 | 4.73E-53 | -1.69E-46 |
| MS.gene054803 | MS.gene069859 | 0.820868 | 5.46E-53 | -1.69E-46 |
| MS.gene054804 | MS.gene069859 | 0.821818 | 3.30E-53 | -1.69E-46 |
| MS.gene054917 | MS.gene069859 | 0.811211 | 7.84E-51 | -1.69E-46 |
| MS.gene054918 | MS.gene069859 | 0.846232 | 2.47E-59 | -1.69E-46 |
| MS.gene054927 | MS.gene069859 | 0.808175 | 3.52E-50 | -1.69E-46 |
| MS.gene05505 | MS.gene069859 | 0.838559 | 2.68E-57 | -1.69E-46 |
| MS.gene055116 | MS.gene069859 | 0.940609 | 1.74E-100 | -1.69E-46 |
| MS.gene055277 | MS.gene069859 | 0.878955 | 1.85E-69 | -1.69E-46 |
| MS.gene055369 | MS.gene069859 | 0.817651 | 2.95E-52 | -1.69E-46 |
| MS.gene055370 | MS.gene069859 | 0.801288 | 9.66E-49 | -1.69E-46 |
| MS.gene055390 | MS.gene069859 | 0.826574 | 2.52E-54 | -1.69E-46 |
| MS.gene055412 | MS.gene069859 | 0.825606 | 4.28E-54 | -1.69E-46 |
| MS.gene055422 | MS.gene069859 | 0.846018 | 2.83E-59 | -1.69E-46 |
| MS.gene055428 | MS.gene069859 | 0.869447 | 3.08E-66 | -1.69E-46 |
| MS.gene055499 | MS.gene069859 | 0.819564 | 1.09E-52 | -1.69E-46 |
| MS.gene05553 | MS.gene069859 | 0.831741 | 1.41E-55 | -1.69E-46 |
| MS.gene055564 | MS.gene069859 | 0.819941 | 8.92E-53 | -1.69E-46 |
| MS.gene055604 | MS.gene069859 | 0.838438 | 2.88E-57 | -1.69E-46 |
| MS.gene055722 | MS.gene069859 | 0.801857 | 7.39E-49 | -1.69E-46 |
| MS.gene05594 | MS.gene069859 | 0.814652 | 1.38E-51 | -1.69E-46 |
| MS.gene05602 | MS.gene069859 | 0.825523 | 4.47E-54 | -1.69E-46 |
| MS.gene056191 | MS.gene069859 | 0.889422 | 2.46E-73 | -1.69E-46 |
| MS.gene056337 | MS.gene069859 | 0.815627 | 8.39E-52 | -1.69E-46 |
| MS.gene056407 | MS.gene069859 | 0.880364 | 5.84E-70 | -1.69E-46 |
| MS.gene056410 | MS.gene069859 | 0.825844 | 3.76E-54 | -1.69E-46 |
| MS.gene056451 | MS.gene069859 | 0.818038 | 2.41E-52 | -1.69E-46 |
| MS.gene056452 | MS.gene069859 | 0.80515 | 1.53E-49 | -1.69E-46 |
| MS.gene056497 | MS.gene069859 | 0.809979 | 1.45E-50 | -1.69E-46 |
| MS.gene056511 | MS.gene069859 | 0.860283 | 2.30E-63 | -1.69E-46 |
| MS.gene056609 | MS.gene069859 | 0.825364 | 4.88E-54 | -1.69E-46 |
| MS.gene056612 | MS.gene069859 | 0.853527 | 2.25E-61 | -1.69E-46 |
| MS.gene056659 | MS.gene069859 | 0.857427 | 1.64E-62 | -1.69E-46 |
| MS.gene056723 | MS.gene069859 | 0.819921 | 9.01E-53 | -1.69E-46 |
| MS.gene056796 | MS.gene069859 | 0.830112 | 3.53E-55 | -1.69E-46 |
| MS.gene056899 | MS.gene069859 | -0.811289 | 7.54E-51 | -1.69E-46 |
| MS.gene057011 | MS.gene069859 | 0.825998 | 3.45E-54 | -1.69E-46 |
| MS.gene05702 | MS.gene069859 | 0.906681 | 1.14E-80 | -1.69E-46 |
| MS.gene057121 | MS.gene069859 | 0.832779 | 7.78E-56 | -1.69E-46 |
| MS.gene057123 | MS.gene069859 | 0.821848 | 3.25E-53 | -1.69E-46 |
| MS.gene057124 | MS.gene069859 | 0.839788 | 1.28E-57 | -1.69E-46 |
| MS.gene057129 | MS.gene069859 | 0.811199 | 7.89E-51 | -1.69E-46 |
| MS.gene057146 | MS.gene069859 | 0.850071 | 2.15E-60 | -1.69E-46 |
| MS.gene057207 | MS.gene069859 | 0.829935 | 3.90E-55 | -1.69E-46 |
| MS.gene057245 | MS.gene069859 | 0.811418 | 7.07E-51 | -1.69E-46 |
| MS.gene057295 | MS.gene069859 | 0.804937 | 1.70E-49 | -1.69E-46 |
| MS.gene057310 | MS.gene069859 | 0.813943 | 1.98E-51 | -1.69E-46 |
| MS.gene057330 | MS.gene069859 | 0.803048 | 4.20E-49 | -1.69E-46 |
| MS.gene05733 | MS.gene069859 | 0.837106 | 6.32E-57 | -1.69E-46 |
| MS.gene057396 | MS.gene069859 | 0.803522 | 3.35E-49 | -1.69E-46 |
| MS.gene057416 | MS.gene069859 | 0.812712 | 3.69E-51 | -1.69E-46 |
| MS.gene057448 | MS.gene069859 | 0.826143 | 3.19E-54 | -1.69E-46 |
| MS.gene057449 | MS.gene069859 | 0.813074 | 3.08E-51 | -1.69E-46 |
| MS.gene057450 | MS.gene069859 | 0.822313 | 2.53E-53 | -1.69E-46 |
| MS.gene057476 | MS.gene069859 | 0.807833 | 4.17E-50 | -1.69E-46 |
| MS.gene057749 | MS.gene069859 | 0.888053 | 8.30E-73 | -1.69E-46 |
| MS.gene057779 | MS.gene069859 | 0.800065 | 1.72E-48 | -1.69E-46 |
| MS.gene057823 | MS.gene069859 | 0.877145 | 7.95E-69 | -1.69E-46 |
| MS.gene057824 | MS.gene069859 | 0.807697 | 4.45E-50 | -1.69E-46 |
| MS.gene057825 | MS.gene069859 | 0.846788 | 1.74E-59 | -1.69E-46 |
| MS.gene058002 | MS.gene069859 | 0.880329 | 6.00E-70 | -1.69E-46 |
| MS.gene058007 | MS.gene069859 | 0.831212 | 1.90E-55 | -1.69E-46 |
| MS.gene058019 | MS.gene069859 | 0.844367 | 7.90E-59 | -1.69E-46 |
| MS.gene058082 | MS.gene069859 | 0.822184 | 2.71E-53 | -1.69E-46 |
| MS.gene05811 | MS.gene069859 | 0.852745 | 3.77E-61 | -1.69E-46 |
| MS.gene058142 | MS.gene069859 | 0.843064 | 1.76E-58 | -1.69E-46 |
| MS.gene058233 | MS.gene069859 | 0.891664 | 3.23E-74 | -1.69E-46 |
| MS.gene058276 | MS.gene069859 | 0.818064 | 2.38E-52 | -1.69E-46 |
| MS.gene058293 | MS.gene069859 | 0.847185 | 1.36E-59 | -1.69E-46 |
| MS.gene058365 | MS.gene069859 | 0.833484 | 5.19E-56 | -1.69E-46 |
| MS.gene058376 | MS.gene069859 | 0.818513 | 1.89E-52 | -1.69E-46 |
| MS.gene058444 | MS.gene069859 | 0.80992 | 1.49E-50 | -1.69E-46 |
| MS.gene058660 | MS.gene069859 | 0.901303 | 3.07E-78 | -1.69E-46 |
| MS.gene058700 | MS.gene069859 | 0.819905 | 9.09E-53 | -1.69E-46 |
| MS.gene058710 | MS.gene069859 | 0.826684 | 2.37E-54 | -1.69E-46 |
| MS.gene058787 | MS.gene069859 | 0.835978 | 1.22E-56 | -1.69E-46 |
| MS.gene05883 | MS.gene069859 | 0.800307 | 1.53E-48 | -1.69E-46 |
| MS.gene058845 | MS.gene069859 | 0.805148 | 1.54E-49 | -1.69E-46 |
| MS.gene05886 | MS.gene069859 | 0.855845 | 4.80E-62 | -1.69E-46 |
| MS.gene058928 | MS.gene069859 | 0.856588 | 2.91E-62 | -1.69E-46 |
| MS.gene058948 | MS.gene069859 | 0.80343 | 3.50E-49 | -1.69E-46 |
| MS.gene058995 | MS.gene069859 | 0.824729 | 6.89E-54 | -1.69E-46 |
| MS.gene059011 | MS.gene069859 | 0.836102 | 1.14E-56 | -1.69E-46 |
| MS.gene05907 | MS.gene069859 | 0.877495 | 6.01E-69 | -1.69E-46 |
| MS.gene059141 | MS.gene069859 | 0.858939 | 5.84E-63 | -1.69E-46 |
| MS.gene059285 | MS.gene069859 | 0.841726 | 3.99E-58 | -1.69E-46 |
| MS.gene059294 | MS.gene069859 | 0.833234 | 6.00E-56 | -1.69E-46 |
| MS.gene059366 | MS.gene069859 | 0.834007 | 3.84E-56 | -1.69E-46 |
| MS.gene059420 | MS.gene069859 | 0.869858 | 2.26E-66 | -1.69E-46 |
| MS.gene059462 | MS.gene069859 | 0.806353 | 8.57E-50 | -1.69E-46 |
| MS.gene059518 | MS.gene069859 | 0.822527 | 2.26E-53 | -1.69E-46 |
| MS.gene059536 | MS.gene069859 | 0.851818 | 6.93E-61 | -1.69E-46 |
| MS.gene059597 | MS.gene069859 | 0.874893 | 4.73E-68 | -1.69E-46 |
| MS.gene059676 | MS.gene069859 | 0.848908 | 4.54E-60 | -1.69E-46 |
| MS.gene059688 | MS.gene069859 | 0.92285 | 5.75E-89 | -1.69E-46 |
| MS.gene059692 | MS.gene069859 | 0.918467 | 1.50E-86 | -1.69E-46 |
| MS.gene059695 | MS.gene069859 | 0.922143 | 1.44E-88 | -1.69E-46 |
| MS.gene059711 | MS.gene069859 | 0.809495 | 1.84E-50 | -1.69E-46 |
| MS.gene059807 | MS.gene069859 | 0.810626 | 1.05E-50 | -1.69E-46 |
| MS.gene05984 | MS.gene069859 | 0.844439 | 7.55E-59 | -1.69E-46 |
| MS.gene059876 | MS.gene069859 | 0.807462 | 5.00E-50 | -1.69E-46 |
| MS.gene059894 | MS.gene069859 | 0.843229 | 1.59E-58 | -1.69E-46 |
| MS.gene059960 | MS.gene069859 | 0.83061 | 2.67E-55 | -1.69E-46 |
| MS.gene059974 | MS.gene069859 | 0.803741 | 3.02E-49 | -1.69E-46 |
| MS.gene060247 | MS.gene069859 | 0.800089 | 1.70E-48 | -1.69E-46 |
| MS.gene06037 | MS.gene069859 | 0.862031 | 6.76E-64 | -1.69E-46 |
| MS.gene060403 | MS.gene069859 | 0.866105 | 3.64E-65 | -1.69E-46 |
| MS.gene060407 | MS.gene069859 | 0.833485 | 5.19E-56 | -1.69E-46 |
| MS.gene060804 | MS.gene069859 | 0.860639 | 1.80E-63 | -1.69E-46 |
| MS.gene060835 | MS.gene069859 | 0.812402 | 4.32E-51 | -1.69E-46 |
| MS.gene060837 | MS.gene069859 | 0.822326 | 2.51E-53 | -1.69E-46 |
| MS.gene06090 | MS.gene069859 | 0.807803 | 4.23E-50 | -1.69E-46 |
| MS.gene061041 | MS.gene069859 | 0.822299 | 2.55E-53 | -1.69E-46 |
| MS.gene061049 | MS.gene069859 | 0.90232 | 1.09E-78 | -1.69E-46 |
| MS.gene061051 | MS.gene069859 | -0.842185 | 3.02E-58 | -1.69E-46 |
| MS.gene061154 | MS.gene069859 | 0.848267 | 6.84E-60 | -1.69E-46 |
| MS.gene061159 | MS.gene069859 | 0.820501 | 6.63E-53 | -1.69E-46 |
| MS.gene061200 | MS.gene069859 | 0.830538 | 2.78E-55 | -1.69E-46 |
PPI:
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene069859.t1 | MTR_2g101380 | 96.335 | 191 | 7 | 0 | 1 | 191 | 1 | 191 | 3.46e-137 | 381 |
| MS.gene069859.t1 | MTR_1g011510 | 53.846 | 104 | 46 | 2 | 72 | 174 | 60 | 162 | 1.99e-24 | 94.4 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene069859.t1 | AT3G16250 | 64.088 | 181 | 52 | 5 | 18 | 186 | 20 | 199 | 3.67e-77 | 229 |
| MS.gene069859.t1 | AT4G32590 | 53.846 | 104 | 46 | 2 | 72 | 174 | 70 | 172 | 1.80e-25 | 97.1 |
| MS.gene069859.t1 | AT4G32590 | 49.074 | 108 | 53 | 2 | 57 | 163 | 55 | 161 | 3.55e-19 | 80.9 |
Find 43 sgRNAs with CRISPR-Local
Find 70 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| CATGCTAATCTCCAATTCTT+TGG | 0.246574 | 2.1:-3778846 | None:intergenic |
| AGTGCCGACTGCTCTAATTT+TGG | 0.281013 | 2.1:-3778028 | None:intergenic |
| GAGAGACGTGTGAATGCATT+AGG | 0.321958 | 2.1:-3777955 | None:intergenic |
| GACAAATGCAAAACCTATAG+AGG | 0.334673 | 2.1:-3778100 | None:intergenic |
| CTTTATAGAAACCAAAGAAT+TGG | 0.359961 | 2.1:+3778835 | MS.gene069859:intron |
| GATTCTAACATTGAACTCTA+TGG | 0.373731 | 2.1:+3778351 | MS.gene069859:CDS |
| TAGGGGTTAGTTTGAGTTGG+AGG | 0.393377 | 2.1:-3777936 | None:intergenic |
| TCTAATGACCCTCCCTCTAT+AGG | 0.394740 | 2.1:+3778087 | MS.gene069859:CDS |
| CTTGTAAAGAGTGTTGTGTT+TGG | 0.421734 | 2.1:-3778003 | None:intergenic |
| CATTCATGTCCTTTCCACTC+TGG | 0.430702 | 2.1:-3779052 | None:intergenic |
| GAACACCAGATGTGCATTAT+CGG | 0.433345 | 2.1:+3778289 | MS.gene069859:CDS |
| AGAGACGTGTGAATGCATTA+GGG | 0.437849 | 2.1:-3777954 | None:intergenic |
| TGCACATCTGGTGTTCCATC+TGG | 0.437999 | 2.1:-3778282 | None:intergenic |
| CATTAGGGGTTAGTTTGAGT+TGG | 0.450485 | 2.1:-3777939 | None:intergenic |
| ATTTGCTATTAGGTTCTTGA+AGG | 0.451453 | 2.1:+3778610 | MS.gene069859:intron |
| GCTGTCCGATAATGCACATC+TGG | 0.465486 | 2.1:-3778294 | None:intergenic |
| GTGGGTGAAGCAGATTCTAC+AGG | 0.486617 | 2.1:+3778879 | MS.gene069859:CDS |
| CTATTAGGTTCTTGAAGGCA+AGG | 0.503895 | 2.1:+3778615 | MS.gene069859:intron |
| GAAGCTTAGGAACATAATGT+TGG | 0.511451 | 2.1:+3778329 | MS.gene069859:CDS |
| CTTGTGGTGGACAGAAGCTT+AGG | 0.512735 | 2.1:+3778316 | MS.gene069859:CDS |
| ACATGAATGGAAATATGAAA+AGG | 0.521149 | 2.1:+3779066 | MS.gene069859:CDS |
| CAGAGTGGAAAGGACATGAA+TGG | 0.529406 | 2.1:+3779053 | MS.gene069859:CDS |
| TGGAACTTGTGCTACATGTA+TGG | 0.561485 | 2.1:+3778489 | MS.gene069859:CDS |
| TAGTCTGTGTTGCTACCAGA+TGG | 0.569681 | 2.1:+3778267 | MS.gene069859:intron |
| TGGGTGAAGCAGATTCTACA+GGG | 0.575014 | 2.1:+3778880 | MS.gene069859:CDS |
| CGGCACTGTCCCTGAAAAGA+CGG | 0.578806 | 2.1:+3778044 | MS.gene069859:CDS |
| TCTTTCTCTTTGTCAGTGCG+AGG | 0.589508 | 2.1:-3778649 | None:intergenic |
| TTAGCATGTCAAACAACTGT+GGG | 0.604116 | 2.1:+3778861 | MS.gene069859:CDS |
| TTGTGCTACATGTATGGTAG+AGG | 0.614537 | 2.1:+3778495 | MS.gene069859:CDS |
| AGAACCAAAATTAGAGCAGT+CGG | 0.615630 | 2.1:+3778024 | MS.gene069859:CDS |
| ACAAATGCAAAACCTATAGA+GGG | 0.622761 | 2.1:-3778099 | None:intergenic |
| GACTCAGCAGACTCTTTGTG+AGG | 0.642468 | 2.1:+3779097 | MS.gene069859:CDS |
| CAACAATTACCAGAGTGGAA+AGG | 0.648231 | 2.1:+3779043 | MS.gene069859:CDS |
| GTGCATTATCGGACAGCTTG+TGG | 0.648882 | 2.1:+3778300 | MS.gene069859:CDS |
| TGAAGCAGATTCTACAGGGG+TGG | 0.651914 | 2.1:+3778884 | MS.gene069859:CDS |
| ATGCAAAACCTATAGAGGGA+GGG | 0.653145 | 2.1:-3778095 | None:intergenic |
| GAGACGTGTGAATGCATTAG+GGG | 0.653996 | 2.1:-3777953 | None:intergenic |
| AATGCAAAACCTATAGAGGG+AGG | 0.655010 | 2.1:-3778096 | None:intergenic |
| ATTAGCATGTCAAACAACTG+TGG | 0.658456 | 2.1:+3778860 | MS.gene069859:CDS |
| TGATTCAACAATTACCAGAG+TGG | 0.670303 | 2.1:+3779038 | MS.gene069859:CDS |
| CATTATCGGACAGCTTGTGG+TGG | 0.674346 | 2.1:+3778303 | MS.gene069859:CDS |
| AGGGTCATTAGAGTCACTAG+TGG | 0.691443 | 2.1:-3778076 | None:intergenic |
| GGGTGAAGCAGATTCTACAG+GGG | 0.770570 | 2.1:+3778881 | MS.gene069859:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !!! | TTTTATTTTTAAGCAATAAT+TGG | + | chr2.1:3778406-3778425 | MS.gene069859:intron | 10.0% |
| !!! | TTTTTTTTTAATTTGCTATT+AGG | + | chr2.1:3778600-3778619 | MS.gene069859:intron | 10.0% |
| !! | CAGATTAGAAATTAATAAAA+TGG | + | chr2.1:3778941-3778960 | MS.gene069859:intron | 15.0% |
| !! | ATTTATGTTGAGCAATATAT+TGG | + | chr2.1:3778986-3779005 | MS.gene069859:intron | 20.0% |
| !! | TAATTCTACTTATATCTAGT+TGG | + | chr2.1:3778193-3778212 | MS.gene069859:intron | 20.0% |
| !!! | AATTAATCTCTAATGTTTTG+TGG | + | chr2.1:3778242-3778261 | MS.gene069859:intron | 20.0% |
| !!! | AGCAAAAATACACATTTTAT+TGG | + | chr2.1:3778547-3778566 | MS.gene069859:intron | 20.0% |
| !!! | GCAAAAATACACATTTTATT+GGG | + | chr2.1:3778548-3778567 | MS.gene069859:intron | 20.0% |
| !!! | GTTAGTACTACTAATTTTTT+GGG | + | chr2.1:3778906-3778925 | MS.gene069859:intron | 20.0% |
| ! | AAGAGAAAGAAAAACTTAAG+AGG | + | chr2.1:3778662-3778681 | MS.gene069859:CDS | 25.0% |
| ! | AATTTAACAAAATTCTACCC+TGG | - | chr2.1:3778459-3778478 | None:intergenic | 25.0% |
| ! | ACATGAATGGAAATATGAAA+AGG | + | chr2.1:3779066-3779085 | MS.gene069859:CDS | 25.0% |
| ! | AGAGAAAGAAAAACTTAAGA+GGG | + | chr2.1:3778663-3778682 | MS.gene069859:CDS | 25.0% |
| ! | CTTTATAGAAACCAAAGAAT+TGG | + | chr2.1:3778835-3778854 | MS.gene069859:intron | 25.0% |
| ! | GTTAGTGAGATAATTACATA+AGG | - | chr2.1:3778378-3778397 | None:intergenic | 25.0% |
| !! | AATTTTGTTAAATTGTGGAG+GGG | + | chr2.1:3778465-3778484 | MS.gene069859:CDS | 25.0% |
| !! | AGAATTTTGTTAAATTGTGG+AGG | + | chr2.1:3778463-3778482 | MS.gene069859:CDS | 25.0% |
| !! | GAATTTTGTTAAATTGTGGA+GGG | + | chr2.1:3778464-3778483 | MS.gene069859:CDS | 25.0% |
| !! | GGTAGAATTTTGTTAAATTG+TGG | + | chr2.1:3778460-3778479 | MS.gene069859:CDS | 25.0% |
| !!! | ATTTTGTTGTTGATTTTTCC+AGG | + | chr2.1:3778438-3778457 | MS.gene069859:intron | 25.0% |
| !!! | GGTTAGTACTACTAATTTTT+TGG | + | chr2.1:3778905-3778924 | MS.gene069859:intron | 25.0% |
| !!! | TTTTGTTGTTGATTTTTCCA+GGG | + | chr2.1:3778439-3778458 | MS.gene069859:intron | 25.0% |
| ACAAATGCAAAACCTATAGA+GGG | - | chr2.1:3778102-3778121 | None:intergenic | 30.0% | |
| GATTCTAACATTGAACTCTA+TGG | + | chr2.1:3778351-3778370 | MS.gene069859:CDS | 30.0% | |
| ! | ATTTTCATTCCATGTGATGT+AGG | + | chr2.1:3779012-3779031 | MS.gene069859:intron | 30.0% |
| ! | ATTTTGTTAAATTGTGGAGG+GGG | + | chr2.1:3778466-3778485 | MS.gene069859:CDS | 30.0% |
| !! | ATTTGCTATTAGGTTCTTGA+AGG | + | chr2.1:3778610-3778629 | MS.gene069859:intron | 30.0% |
| !!! | TGGTCTGAATTTTTTATGTG+AGG | - | chr2.1:3777986-3778005 | None:intergenic | 30.0% |
| AGAACCAAAATTAGAGCAGT+CGG | + | chr2.1:3778024-3778043 | MS.gene069859:CDS | 35.0% | |
| ATGTGAAATGTGAACTCTTG+TGG | + | chr2.1:3778778-3778797 | MS.gene069859:intron | 35.0% | |
| ATTAGCATGTCAAACAACTG+TGG | + | chr2.1:3778860-3778879 | MS.gene069859:CDS | 35.0% | |
| CATGCTAATCTCCAATTCTT+TGG | - | chr2.1:3778849-3778868 | None:intergenic | 35.0% | |
| GAAGCTTAGGAACATAATGT+TGG | + | chr2.1:3778329-3778348 | MS.gene069859:CDS | 35.0% | |
| GACAAATGCAAAACCTATAG+AGG | - | chr2.1:3778103-3778122 | None:intergenic | 35.0% | |
| TGATTCAACAATTACCAGAG+TGG | + | chr2.1:3779038-3779057 | MS.gene069859:CDS | 35.0% | |
| TTAGCATGTCAAACAACTGT+GGG | + | chr2.1:3778861-3778880 | MS.gene069859:CDS | 35.0% | |
| !! | CTTGTAAAGAGTGTTGTGTT+TGG | - | chr2.1:3778006-3778025 | None:intergenic | 35.0% |
| AATGCAAAACCTATAGAGGG+AGG | - | chr2.1:3778099-3778118 | None:intergenic | 40.0% | |
| AGAGACGTGTGAATGCATTA+GGG | - | chr2.1:3777957-3777976 | None:intergenic | 40.0% | |
| ATGCAAAACCTATAGAGGGA+GGG | - | chr2.1:3778098-3778117 | None:intergenic | 40.0% | |
| CAACAATTACCAGAGTGGAA+AGG | + | chr2.1:3779043-3779062 | MS.gene069859:CDS | 40.0% | |
| CTATTAGGTTCTTGAAGGCA+AGG | + | chr2.1:3778615-3778634 | MS.gene069859:intron | 40.0% | |
| GAACACCAGATGTGCATTAT+CGG | + | chr2.1:3778289-3778308 | MS.gene069859:CDS | 40.0% | |
| GAATCACAACCTACATCACA+TGG | - | chr2.1:3779024-3779043 | None:intergenic | 40.0% | |
| TGGAACTTGTGCTACATGTA+TGG | + | chr2.1:3778489-3778508 | MS.gene069859:CDS | 40.0% | |
| TTGTGCTACATGTATGGTAG+AGG | + | chr2.1:3778495-3778514 | MS.gene069859:CDS | 40.0% | |
| ! | TCTCTGAATCCGTCTTTTCA+GGG | - | chr2.1:3778056-3778075 | None:intergenic | 40.0% |
| !! | CATTAGGGGTTAGTTTGAGT+TGG | - | chr2.1:3777942-3777961 | None:intergenic | 40.0% |
| AGGGTCATTAGAGTCACTAG+TGG | - | chr2.1:3778079-3778098 | None:intergenic | 45.0% | |
| CAGAGTGGAAAGGACATGAA+TGG | + | chr2.1:3779053-3779072 | MS.gene069859:CDS | 45.0% | |
| CATTCATGTCCTTTCCACTC+TGG | - | chr2.1:3779055-3779074 | None:intergenic | 45.0% | |
| GAGACGTGTGAATGCATTAG+GGG | - | chr2.1:3777956-3777975 | None:intergenic | 45.0% | |
| GAGAGACGTGTGAATGCATT+AGG | - | chr2.1:3777958-3777977 | None:intergenic | 45.0% | |
| TCTAATGACCCTCCCTCTAT+AGG | + | chr2.1:3778087-3778106 | MS.gene069859:CDS | 45.0% | |
| TCTTTCTCTTTGTCAGTGCG+AGG | - | chr2.1:3778652-3778671 | None:intergenic | 45.0% | |
| TGGGTGAAGCAGATTCTACA+GGG | + | chr2.1:3778880-3778899 | MS.gene069859:CDS | 45.0% | |
| TTGTTAAATTGTGGAGGGGG+TGG | + | chr2.1:3778469-3778488 | MS.gene069859:CDS | 45.0% | |
| ! | GTCTCTGAATCCGTCTTTTC+AGG | - | chr2.1:3778057-3778076 | None:intergenic | 45.0% |
| ! | TAGTCTGTGTTGCTACCAGA+TGG | + | chr2.1:3778267-3778286 | MS.gene069859:intron | 45.0% |
| !! | TAGGGGTTAGTTTGAGTTGG+AGG | - | chr2.1:3777939-3777958 | None:intergenic | 45.0% |
| !!! | AGTGCCGACTGCTCTAATTT+TGG | - | chr2.1:3778031-3778050 | None:intergenic | 45.0% |
| CATTATCGGACAGCTTGTGG+TGG | + | chr2.1:3778303-3778322 | MS.gene069859:CDS | 50.0% | |
| GCTGTCCGATAATGCACATC+TGG | - | chr2.1:3778297-3778316 | None:intergenic | 50.0% | |
| GGGTGAAGCAGATTCTACAG+GGG | + | chr2.1:3778881-3778900 | MS.gene069859:CDS | 50.0% | |
| GTGCATTATCGGACAGCTTG+TGG | + | chr2.1:3778300-3778319 | MS.gene069859:CDS | 50.0% | |
| GTGGGTGAAGCAGATTCTAC+AGG | + | chr2.1:3778879-3778898 | MS.gene069859:CDS | 50.0% | |
| TGAAGCAGATTCTACAGGGG+TGG | + | chr2.1:3778884-3778903 | MS.gene069859:CDS | 50.0% | |
| TGCACATCTGGTGTTCCATC+TGG | - | chr2.1:3778285-3778304 | None:intergenic | 50.0% | |
| !! | CTTGTGGTGGACAGAAGCTT+AGG | + | chr2.1:3778316-3778335 | MS.gene069859:CDS | 50.0% |
| CGGCACTGTCCCTGAAAAGA+CGG | + | chr2.1:3778044-3778063 | MS.gene069859:CDS | 55.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr2.1 | gene | 3777928 | 3779117 | 3777928 | ID=MS.gene069859 |
| chr2.1 | mRNA | 3777928 | 3779117 | 3777928 | ID=MS.gene069859.t1;Parent=MS.gene069859 |
| chr2.1 | exon | 3777928 | 3778125 | 3777928 | ID=MS.gene069859.t1.exon1;Parent=MS.gene069859.t1 |
| chr2.1 | CDS | 3777928 | 3778125 | 3777928 | ID=cds.MS.gene069859.t1;Parent=MS.gene069859.t1 |
| chr2.1 | exon | 3778270 | 3778380 | 3778270 | ID=MS.gene069859.t1.exon2;Parent=MS.gene069859.t1 |
| chr2.1 | CDS | 3778270 | 3778380 | 3778270 | ID=cds.MS.gene069859.t1;Parent=MS.gene069859.t1 |
| chr2.1 | exon | 3778460 | 3778516 | 3778460 | ID=MS.gene069859.t1.exon3;Parent=MS.gene069859.t1 |
| chr2.1 | CDS | 3778460 | 3778516 | 3778460 | ID=cds.MS.gene069859.t1;Parent=MS.gene069859.t1 |
| chr2.1 | exon | 3778622 | 3778684 | 3778622 | ID=MS.gene069859.t1.exon4;Parent=MS.gene069859.t1 |
| chr2.1 | CDS | 3778622 | 3778684 | 3778622 | ID=cds.MS.gene069859.t1;Parent=MS.gene069859.t1 |
| chr2.1 | exon | 3778843 | 3778905 | 3778843 | ID=MS.gene069859.t1.exon5;Parent=MS.gene069859.t1 |
| chr2.1 | CDS | 3778843 | 3778905 | 3778843 | ID=cds.MS.gene069859.t1;Parent=MS.gene069859.t1 |
| chr2.1 | exon | 3779034 | 3779117 | 3779034 | ID=MS.gene069859.t1.exon6;Parent=MS.gene069859.t1 |
| chr2.1 | CDS | 3779034 | 3779117 | 3779034 | ID=cds.MS.gene069859.t1;Parent=MS.gene069859.t1 |
| Gene Sequence |
| Protein sequence |
