Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene063426.t1 | XP_013464342.1 | 96.3 | 219 | 8 | 0 | 1 | 219 | 1 | 219 | 1.60E-119 | 438.7 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene063426.t1 | P46417 | 78.7 | 216 | 46 | 0 | 1 | 216 | 1 | 216 | 1.2e-99 | 364.0 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene063426.t1 | A0A072V9B8 | 96.3 | 219 | 8 | 0 | 1 | 219 | 1 | 219 | 1.1e-119 | 438.7 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| MS.gene049150 | MS.gene063426 | 0.825538 | 4.44E-54 | -1.69E-46 |
| MS.gene049153 | MS.gene063426 | 0.82587 | 3.70E-54 | -1.69E-46 |
| MS.gene049195 | MS.gene063426 | 0.809403 | 1.92E-50 | -1.69E-46 |
| MS.gene04933 | MS.gene063426 | 0.800488 | 1.41E-48 | -1.69E-46 |
| MS.gene049346 | MS.gene063426 | 0.864264 | 1.38E-64 | -1.69E-46 |
| MS.gene049351 | MS.gene063426 | 0.82111 | 4.80E-53 | -1.69E-46 |
| MS.gene049378 | MS.gene063426 | 0.835614 | 1.51E-56 | -1.69E-46 |
| MS.gene049661 | MS.gene063426 | 0.820528 | 6.54E-53 | -1.69E-46 |
| MS.gene049662 | MS.gene063426 | 0.829678 | 4.50E-55 | -1.69E-46 |
| MS.gene049758 | MS.gene063426 | 0.882079 | 1.41E-70 | -1.69E-46 |
| MS.gene049910 | MS.gene063426 | 0.867598 | 1.22E-65 | -1.69E-46 |
| MS.gene049915 | MS.gene063426 | 0.828657 | 7.96E-55 | -1.69E-46 |
| MS.gene049993 | MS.gene063426 | 0.827179 | 1.80E-54 | -1.69E-46 |
| MS.gene050128 | MS.gene063426 | 0.803761 | 2.99E-49 | -1.69E-46 |
| MS.gene050226 | MS.gene063426 | 0.80178 | 7.66E-49 | -1.69E-46 |
| MS.gene050227 | MS.gene063426 | 0.80762 | 4.62E-50 | -1.69E-46 |
| MS.gene050228 | MS.gene063426 | 0.80336 | 3.62E-49 | -1.69E-46 |
| MS.gene050301 | MS.gene063426 | 0.873224 | 1.73E-67 | -1.69E-46 |
| MS.gene050330 | MS.gene063426 | -0.808249 | 3.40E-50 | -1.69E-46 |
| MS.gene050397 | MS.gene063426 | 0.849483 | 3.14E-60 | -1.69E-46 |
| MS.gene050406 | MS.gene063426 | 0.827133 | 1.85E-54 | -1.69E-46 |
| MS.gene050426 | MS.gene063426 | -0.817218 | 3.70E-52 | -1.69E-46 |
| MS.gene050464 | MS.gene063426 | 0.852708 | 3.87E-61 | -1.69E-46 |
| MS.gene050529 | MS.gene063426 | 0.839948 | 1.17E-57 | -1.69E-46 |
| MS.gene050558 | MS.gene063426 | 0.816048 | 6.76E-52 | -1.69E-46 |
| MS.gene050623 | MS.gene063426 | -0.801219 | 9.98E-49 | -1.69E-46 |
| MS.gene050642 | MS.gene063426 | 0.825272 | 5.13E-54 | -1.69E-46 |
| MS.gene050650 | MS.gene063426 | 0.802463 | 5.54E-49 | -1.69E-46 |
| MS.gene050670 | MS.gene063426 | 0.849493 | 3.12E-60 | -1.69E-46 |
| MS.gene050820 | MS.gene063426 | 0.802864 | 4.58E-49 | -1.69E-46 |
| MS.gene05101 | MS.gene063426 | 0.822276 | 2.58E-53 | -1.69E-46 |
| MS.gene05105 | MS.gene063426 | 0.807347 | 5.28E-50 | -1.69E-46 |
| MS.gene05119 | MS.gene063426 | -0.825138 | 5.52E-54 | -1.69E-46 |
| MS.gene051471 | MS.gene063426 | 0.834756 | 2.49E-56 | -1.69E-46 |
| MS.gene051525 | MS.gene063426 | 0.816554 | 5.21E-52 | -1.69E-46 |
| MS.gene051582 | MS.gene063426 | 0.860564 | 1.89E-63 | -1.69E-46 |
| MS.gene051662 | MS.gene063426 | 0.805041 | 1.62E-49 | -1.69E-46 |
| MS.gene051663 | MS.gene063426 | 0.831045 | 2.09E-55 | -1.69E-46 |
| MS.gene051860 | MS.gene063426 | 0.85959 | 3.72E-63 | -1.69E-46 |
| MS.gene051983 | MS.gene063426 | 0.85631 | 3.51E-62 | -1.69E-46 |
| MS.gene052011 | MS.gene063426 | -0.860376 | 2.16E-63 | -1.69E-46 |
| MS.gene052077 | MS.gene063426 | 0.874488 | 6.49E-68 | -1.69E-46 |
| MS.gene052078 | MS.gene063426 | 0.814546 | 1.46E-51 | -1.69E-46 |
| MS.gene052178 | MS.gene063426 | 0.819336 | 1.23E-52 | -1.69E-46 |
| MS.gene052188 | MS.gene063426 | 0.840721 | 7.33E-58 | -1.69E-46 |
| MS.gene052207 | MS.gene063426 | 0.806333 | 8.66E-50 | -1.69E-46 |
| MS.gene052253 | MS.gene063426 | 0.869651 | 2.64E-66 | -1.69E-46 |
| MS.gene052255 | MS.gene063426 | 0.809652 | 1.70E-50 | -1.69E-46 |
| MS.gene052310 | MS.gene063426 | 0.82599 | 3.47E-54 | -1.69E-46 |
| MS.gene052340 | MS.gene063426 | 0.847553 | 1.08E-59 | -1.69E-46 |
| MS.gene052485 | MS.gene063426 | 0.803328 | 3.67E-49 | -1.69E-46 |
| MS.gene053073 | MS.gene063426 | 0.814296 | 1.66E-51 | -1.69E-46 |
| MS.gene05316 | MS.gene063426 | 0.800526 | 1.38E-48 | -1.69E-46 |
| MS.gene053184 | MS.gene063426 | 0.81431 | 1.64E-51 | -1.69E-46 |
| MS.gene053209 | MS.gene063426 | 0.814216 | 1.72E-51 | -1.69E-46 |
| MS.gene053557 | MS.gene063426 | 0.821841 | 3.26E-53 | -1.69E-46 |
| MS.gene053836 | MS.gene063426 | 0.900637 | 6.00E-78 | -1.69E-46 |
| MS.gene053907 | MS.gene063426 | 0.808012 | 3.82E-50 | -1.69E-46 |
| MS.gene053928 | MS.gene063426 | 0.857797 | 1.28E-62 | -1.69E-46 |
| MS.gene053971 | MS.gene063426 | 0.809888 | 1.51E-50 | -1.69E-46 |
| MS.gene054010 | MS.gene063426 | 0.819868 | 9.26E-53 | -1.69E-46 |
| MS.gene054011 | MS.gene063426 | 0.843858 | 1.08E-58 | -1.69E-46 |
| MS.gene054012 | MS.gene063426 | 0.831758 | 1.39E-55 | -1.69E-46 |
| MS.gene054013 | MS.gene063426 | 0.826009 | 3.43E-54 | -1.69E-46 |
| MS.gene054123 | MS.gene063426 | 0.814754 | 1.31E-51 | -1.69E-46 |
| MS.gene054183 | MS.gene063426 | 0.8512 | 1.04E-60 | -1.69E-46 |
| MS.gene054349 | MS.gene063426 | 0.83434 | 3.17E-56 | -1.69E-46 |
| MS.gene054473 | MS.gene063426 | 0.857411 | 1.66E-62 | -1.69E-46 |
| MS.gene054542 | MS.gene063426 | 0.80745 | 5.03E-50 | -1.69E-46 |
| MS.gene054918 | MS.gene063426 | 0.83787 | 4.03E-57 | -1.69E-46 |
| MS.gene054930 | MS.gene063426 | 0.854111 | 1.53E-61 | -1.69E-46 |
| MS.gene054942 | MS.gene063426 | 0.812161 | 4.87E-51 | -1.69E-46 |
| MS.gene054983 | MS.gene063426 | 0.857197 | 1.92E-62 | -1.69E-46 |
| MS.gene055116 | MS.gene063426 | 0.873315 | 1.62E-67 | -1.69E-46 |
| MS.gene055277 | MS.gene063426 | 0.867279 | 1.54E-65 | -1.69E-46 |
| MS.gene055369 | MS.gene063426 | 0.805547 | 1.27E-49 | -1.69E-46 |
| MS.gene055390 | MS.gene063426 | 0.811659 | 6.27E-51 | -1.69E-46 |
| MS.gene055422 | MS.gene063426 | 0.860916 | 1.48E-63 | -1.69E-46 |
| MS.gene055428 | MS.gene063426 | 0.862772 | 4.00E-64 | -1.69E-46 |
| MS.gene05553 | MS.gene063426 | 0.854494 | 1.19E-61 | -1.69E-46 |
| MS.gene055604 | MS.gene063426 | 0.852359 | 4.86E-61 | -1.69E-46 |
| MS.gene055712 | MS.gene063426 | 0.850236 | 1.93E-60 | -1.69E-46 |
| MS.gene055859 | MS.gene063426 | 0.812945 | 3.28E-51 | -1.69E-46 |
| MS.gene056191 | MS.gene063426 | 0.828709 | 7.73E-55 | -1.69E-46 |
| MS.gene056407 | MS.gene063426 | 0.85957 | 3.78E-63 | -1.69E-46 |
| MS.gene056451 | MS.gene063426 | 0.808535 | 2.95E-50 | -1.69E-46 |
| MS.gene056612 | MS.gene063426 | 0.852987 | 3.22E-61 | -1.69E-46 |
| MS.gene05663 | MS.gene063426 | 0.809648 | 1.71E-50 | -1.69E-46 |
| MS.gene056659 | MS.gene063426 | 0.8078 | 4.23E-50 | -1.69E-46 |
| MS.gene056723 | MS.gene063426 | 0.838124 | 3.47E-57 | -1.69E-46 |
| MS.gene056899 | MS.gene063426 | -0.836877 | 7.23E-57 | -1.69E-46 |
| MS.gene056902 | MS.gene063426 | 0.803697 | 3.08E-49 | -1.69E-46 |
| MS.gene056979 | MS.gene063426 | 0.851711 | 7.43E-61 | -1.69E-46 |
| MS.gene05702 | MS.gene063426 | 0.885861 | 5.64E-72 | -1.69E-46 |
| MS.gene057121 | MS.gene063426 | 0.851429 | 8.93E-61 | -1.69E-46 |
| MS.gene057245 | MS.gene063426 | 0.853936 | 1.72E-61 | -1.69E-46 |
| MS.gene057396 | MS.gene063426 | 0.834534 | 2.84E-56 | -1.69E-46 |
| MS.gene057439 | MS.gene063426 | 0.825695 | 4.07E-54 | -1.69E-46 |
| MS.gene057448 | MS.gene063426 | 0.825263 | 5.16E-54 | -1.69E-46 |
| MS.gene057449 | MS.gene063426 | 0.819 | 1.46E-52 | -1.69E-46 |
| MS.gene057450 | MS.gene063426 | 0.830591 | 2.69E-55 | -1.69E-46 |
| MS.gene057469 | MS.gene063426 | 0.831407 | 1.70E-55 | -1.69E-46 |
| MS.gene057476 | MS.gene063426 | 0.815014 | 1.15E-51 | -1.69E-46 |
| MS.gene057749 | MS.gene063426 | 0.81249 | 4.13E-51 | -1.69E-46 |
| MS.gene057754 | MS.gene063426 | 0.820311 | 7.34E-53 | -1.69E-46 |
| MS.gene057823 | MS.gene063426 | 0.808656 | 2.78E-50 | -1.69E-46 |
| MS.gene058002 | MS.gene063426 | 0.870343 | 1.57E-66 | -1.69E-46 |
| MS.gene05811 | MS.gene063426 | 0.854551 | 1.14E-61 | -1.69E-46 |
| MS.gene058142 | MS.gene063426 | 0.849038 | 4.18E-60 | -1.69E-46 |
| MS.gene058233 | MS.gene063426 | 0.837849 | 4.08E-57 | -1.69E-46 |
| MS.gene058276 | MS.gene063426 | 0.807443 | 5.04E-50 | -1.69E-46 |
| MS.gene058293 | MS.gene063426 | 0.804385 | 2.22E-49 | -1.69E-46 |
| MS.gene05842 | MS.gene063426 | 0.800197 | 1.61E-48 | -1.69E-46 |
| MS.gene058660 | MS.gene063426 | 0.831072 | 2.05E-55 | -1.69E-46 |
| MS.gene058710 | MS.gene063426 | 0.840363 | 9.09E-58 | -1.69E-46 |
| MS.gene058749 | MS.gene063426 | 0.838013 | 3.70E-57 | -1.69E-46 |
| MS.gene058845 | MS.gene063426 | 0.835342 | 1.77E-56 | -1.69E-46 |
| MS.gene05886 | MS.gene063426 | 0.843043 | 1.79E-58 | -1.69E-46 |
| MS.gene059011 | MS.gene063426 | 0.80946 | 1.87E-50 | -1.69E-46 |
| MS.gene05907 | MS.gene063426 | 0.882682 | 8.49E-71 | -1.69E-46 |
| MS.gene059124 | MS.gene063426 | 0.801351 | 9.38E-49 | -1.69E-46 |
| MS.gene059285 | MS.gene063426 | 0.827664 | 1.38E-54 | -1.69E-46 |
| MS.gene059294 | MS.gene063426 | 0.818904 | 1.54E-52 | -1.69E-46 |
| MS.gene059420 | MS.gene063426 | 0.872975 | 2.10E-67 | -1.69E-46 |
| MS.gene059462 | MS.gene063426 | 0.826831 | 2.19E-54 | -1.69E-46 |
| MS.gene059518 | MS.gene063426 | 0.8348 | 2.43E-56 | -1.69E-46 |
| MS.gene059597 | MS.gene063426 | 0.815219 | 1.03E-51 | -1.69E-46 |
| MS.gene059676 | MS.gene063426 | 0.817866 | 2.64E-52 | -1.69E-46 |
| MS.gene059688 | MS.gene063426 | 0.855025 | 8.32E-62 | -1.69E-46 |
| MS.gene059692 | MS.gene063426 | 0.852224 | 5.31E-61 | -1.69E-46 |
| MS.gene059695 | MS.gene063426 | 0.852613 | 4.12E-61 | -1.69E-46 |
| MS.gene05984 | MS.gene063426 | 0.854192 | 1.45E-61 | -1.69E-46 |
| MS.gene059876 | MS.gene063426 | 0.80904 | 2.30E-50 | -1.69E-46 |
| MS.gene059894 | MS.gene063426 | 0.846481 | 2.11E-59 | -1.69E-46 |
| MS.gene06037 | MS.gene063426 | 0.862746 | 4.07E-64 | -1.69E-46 |
| MS.gene060403 | MS.gene063426 | 0.833723 | 4.53E-56 | -1.69E-46 |
| MS.gene060495 | MS.gene063426 | 0.804684 | 1.92E-49 | -1.69E-46 |
| MS.gene061002 | MS.gene063426 | 0.803822 | 2.90E-49 | -1.69E-46 |
| MS.gene061049 | MS.gene063426 | 0.904398 | 1.28E-79 | -1.69E-46 |
| MS.gene061051 | MS.gene063426 | -0.804407 | 2.19E-49 | -1.69E-46 |
| MS.gene061114 | MS.gene063426 | -0.803506 | 3.38E-49 | -1.69E-46 |
| MS.gene061154 | MS.gene063426 | 0.839829 | 1.25E-57 | -1.69E-46 |
| MS.gene061159 | MS.gene063426 | 0.841989 | 3.40E-58 | -1.69E-46 |
PPI:
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene063426.t1 | MTR_2g070060 | 96.347 | 219 | 8 | 0 | 1 | 219 | 1 | 219 | 2.64e-159 | 439 |
| MS.gene063426.t1 | MTR_2g070070 | 85.388 | 219 | 32 | 0 | 1 | 219 | 1 | 219 | 2.92e-134 | 376 |
| MS.gene063426.t1 | MTR_2g070110 | 84.018 | 219 | 34 | 1 | 1 | 219 | 1 | 218 | 3.39e-132 | 370 |
| MS.gene063426.t1 | MTR_2g070180 | 63.721 | 215 | 78 | 0 | 1 | 215 | 1 | 215 | 1.04e-107 | 308 |
| MS.gene063426.t1 | MTR_2g070150 | 65.686 | 204 | 70 | 0 | 1 | 204 | 1 | 204 | 1.67e-104 | 300 |
| MS.gene063426.t1 | MTR_2g070140 | 64.532 | 203 | 72 | 0 | 17 | 219 | 1 | 203 | 2.33e-102 | 295 |
| MS.gene063426.t1 | MTR_2g070130 | 59.817 | 219 | 88 | 0 | 1 | 219 | 1 | 219 | 6.57e-101 | 291 |
| MS.gene063426.t1 | MTR_8g056940 | 63.014 | 219 | 81 | 0 | 1 | 219 | 1 | 219 | 1.23e-100 | 291 |
| MS.gene063426.t1 | MTR_2g070210 | 58.824 | 221 | 89 | 1 | 1 | 219 | 1 | 221 | 8.90e-97 | 281 |
| MS.gene063426.t1 | MTR_2g070200 | 59.091 | 220 | 88 | 2 | 1 | 218 | 1 | 220 | 2.55e-94 | 275 |
| MS.gene063426.t1 | MTR_3g467420 | 57.798 | 218 | 91 | 1 | 2 | 219 | 8 | 224 | 1.79e-93 | 273 |
| MS.gene063426.t1 | MTR_4g124130 | 58.636 | 220 | 90 | 1 | 1 | 219 | 1 | 220 | 1.31e-91 | 268 |
| MS.gene063426.t1 | MTR_3g467430 | 56.132 | 212 | 93 | 0 | 3 | 214 | 8 | 219 | 1.93e-89 | 263 |
| MS.gene063426.t1 | MTR_2g070120 | 53.110 | 209 | 98 | 0 | 1 | 209 | 1 | 209 | 7.68e-81 | 241 |
| MS.gene063426.t1 | MTR_5g076900 | 49.315 | 219 | 109 | 2 | 2 | 219 | 4 | 221 | 5.78e-74 | 223 |
| MS.gene063426.t1 | MTR_0186s0030 | 65.248 | 141 | 49 | 0 | 1 | 141 | 1 | 141 | 5.36e-62 | 190 |
| MS.gene063426.t1 | MTR_5g040430 | 36.036 | 222 | 132 | 3 | 3 | 217 | 6 | 224 | 5.25e-49 | 160 |
| MS.gene063426.t1 | MTR_5g037380 | 40.359 | 223 | 124 | 4 | 3 | 216 | 4 | 226 | 5.38e-48 | 157 |
| MS.gene063426.t1 | MTR_1g090060 | 40.476 | 210 | 120 | 3 | 4 | 209 | 3 | 211 | 6.63e-44 | 147 |
| MS.gene063426.t1 | MTR_2g072120 | 91.549 | 71 | 6 | 0 | 47 | 117 | 1 | 71 | 1.32e-43 | 141 |
| MS.gene063426.t1 | MTR_8g087425 | 39.234 | 209 | 121 | 5 | 1 | 205 | 1 | 207 | 2.89e-43 | 145 |
| MS.gene063426.t1 | MTR_4g019780 | 38.462 | 208 | 123 | 4 | 4 | 208 | 8 | 213 | 8.39e-43 | 144 |
| MS.gene063426.t1 | MTR_4g019790 | 40.284 | 211 | 121 | 4 | 4 | 211 | 7 | 215 | 3.30e-42 | 142 |
| MS.gene063426.t1 | MTR_8g087410 | 39.320 | 206 | 119 | 5 | 1 | 202 | 2 | 205 | 4.01e-42 | 142 |
| MS.gene063426.t1 | MTR_7g065720 | 36.792 | 212 | 122 | 5 | 4 | 208 | 7 | 213 | 2.41e-40 | 137 |
| MS.gene063426.t1 | MTR_3g099757 | 37.500 | 216 | 132 | 3 | 3 | 216 | 4 | 218 | 3.44e-40 | 137 |
| MS.gene063426.t1 | MTR_7g065660 | 38.164 | 207 | 123 | 4 | 5 | 208 | 8 | 212 | 6.50e-40 | 136 |
| MS.gene063426.t1 | MTR_1g090070 | 38.009 | 221 | 128 | 6 | 4 | 217 | 9 | 227 | 1.40e-39 | 136 |
| MS.gene063426.t1 | MTR_6g080440 | 36.842 | 209 | 127 | 4 | 3 | 208 | 2 | 208 | 3.13e-39 | 135 |
| MS.gene063426.t1 | MTR_1g090100 | 41.089 | 202 | 114 | 3 | 11 | 208 | 9 | 209 | 3.23e-39 | 134 |
| MS.gene063426.t1 | MTR_4g059730 | 36.986 | 219 | 127 | 5 | 1 | 212 | 1 | 215 | 3.25e-39 | 134 |
| MS.gene063426.t1 | MTR_7g065750 | 38.739 | 222 | 123 | 6 | 4 | 214 | 7 | 226 | 5.50e-39 | 134 |
| MS.gene063426.t1 | MTR_7g065630 | 37.981 | 208 | 118 | 6 | 4 | 206 | 25 | 226 | 1.14e-38 | 134 |
| MS.gene063426.t1 | MTR_8g061950 | 36.321 | 212 | 126 | 3 | 3 | 205 | 4 | 215 | 1.74e-38 | 133 |
| MS.gene063426.t1 | MTR_7g065590 | 37.500 | 208 | 125 | 4 | 4 | 208 | 7 | 212 | 1.01e-37 | 131 |
| MS.gene063426.t1 | MTR_7g065740 | 35.407 | 209 | 129 | 4 | 4 | 208 | 7 | 213 | 9.38e-37 | 128 |
| MS.gene063426.t1 | MTR_1g090090 | 39.234 | 209 | 122 | 4 | 4 | 208 | 3 | 210 | 2.23e-36 | 127 |
| MS.gene063426.t1 | MTR_7g065710 | 35.071 | 211 | 128 | 5 | 1 | 208 | 1 | 205 | 2.74e-36 | 127 |
| MS.gene063426.t1 | MTR_1g090150 | 35.484 | 217 | 134 | 4 | 4 | 216 | 3 | 217 | 7.21e-36 | 126 |
| MS.gene063426.t1 | MTR_7g065230 | 37.500 | 208 | 120 | 5 | 4 | 208 | 7 | 207 | 2.37e-35 | 124 |
| MS.gene063426.t1 | MTR_7g065265 | 36.538 | 208 | 127 | 4 | 4 | 208 | 7 | 212 | 2.33e-34 | 122 |
| MS.gene063426.t1 | MTR_7g065270 | 36.058 | 208 | 128 | 4 | 4 | 208 | 7 | 212 | 5.80e-34 | 121 |
| MS.gene063426.t1 | MTR_7g065680 | 35.071 | 211 | 128 | 5 | 1 | 208 | 4 | 208 | 8.24e-34 | 120 |
| MS.gene063426.t1 | MTR_7g065700 | 36.058 | 208 | 124 | 5 | 4 | 208 | 7 | 208 | 2.70e-33 | 119 |
| MS.gene063426.t1 | MTR_7g065600 | 36.634 | 202 | 123 | 4 | 5 | 203 | 8 | 207 | 4.34e-33 | 119 |
| MS.gene063426.t1 | MTR_7g065290 | 36.058 | 208 | 128 | 4 | 4 | 208 | 7 | 212 | 1.07e-32 | 118 |
| MS.gene063426.t1 | MTR_1g115195 | 34.135 | 208 | 129 | 4 | 4 | 205 | 3 | 208 | 1.29e-32 | 117 |
| MS.gene063426.t1 | MTR_7g065640 | 33.171 | 205 | 118 | 4 | 5 | 208 | 8 | 194 | 6.27e-31 | 113 |
| MS.gene063426.t1 | MTR_7g065260 | 37.129 | 202 | 122 | 4 | 4 | 202 | 14 | 213 | 5.90e-30 | 111 |
| MS.gene063426.t1 | MTR_4g043640 | 57.143 | 42 | 18 | 0 | 148 | 189 | 44 | 85 | 4.98e-13 | 62.8 |
| MS.gene063426.t1 | MTR_5g037390 | 40.909 | 88 | 50 | 1 | 28 | 113 | 11 | 98 | 9.27e-13 | 62.4 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene063426.t1 | AT1G78380 | 64.019 | 214 | 77 | 0 | 1 | 214 | 1 | 214 | 6.21e-103 | 296 |
| MS.gene063426.t1 | AT1G17180 | 61.187 | 219 | 85 | 0 | 1 | 219 | 1 | 219 | 1.43e-102 | 296 |
| MS.gene063426.t1 | AT1G78340 | 60.465 | 215 | 85 | 0 | 1 | 215 | 1 | 215 | 7.14e-97 | 281 |
| MS.gene063426.t1 | AT1G78370 | 60.748 | 214 | 84 | 0 | 1 | 214 | 1 | 214 | 1.75e-96 | 280 |
| MS.gene063426.t1 | AT1G17170 | 59.361 | 219 | 88 | 1 | 1 | 219 | 1 | 218 | 4.85e-96 | 279 |
| MS.gene063426.t1 | AT1G78360 | 60.455 | 220 | 86 | 1 | 1 | 219 | 1 | 220 | 1.24e-95 | 278 |
| MS.gene063426.t1 | AT1G78320 | 59.545 | 220 | 88 | 1 | 1 | 219 | 1 | 220 | 5.55e-94 | 274 |
| MS.gene063426.t1 | AT1G17190 | 56.481 | 216 | 94 | 0 | 2 | 217 | 3 | 218 | 5.51e-89 | 261 |
| MS.gene063426.t1 | AT1G53680 | 54.018 | 224 | 98 | 3 | 1 | 219 | 1 | 224 | 4.56e-88 | 259 |
| MS.gene063426.t1 | AT3G43800 | 51.598 | 219 | 102 | 3 | 4 | 218 | 5 | 223 | 1.87e-78 | 235 |
| MS.gene063426.t1 | AT1G78320 | 51.818 | 220 | 78 | 2 | 1 | 219 | 1 | 193 | 6.26e-75 | 225 |
| MS.gene063426.t1 | AT1G10360 | 41.121 | 214 | 118 | 4 | 4 | 209 | 5 | 218 | 8.02e-50 | 162 |
| MS.gene063426.t1 | AT3G09270 | 41.204 | 216 | 121 | 3 | 5 | 217 | 7 | 219 | 3.71e-48 | 157 |
| MS.gene063426.t1 | AT1G59700 | 41.743 | 218 | 112 | 5 | 4 | 209 | 6 | 220 | 7.07e-47 | 155 |
| MS.gene063426.t1 | AT1G59670 | 43.578 | 218 | 108 | 5 | 4 | 209 | 6 | 220 | 5.47e-45 | 150 |
| MS.gene063426.t1 | AT2G29420 | 40.299 | 201 | 117 | 2 | 4 | 202 | 9 | 208 | 1.21e-44 | 149 |
| MS.gene063426.t1 | AT1G10370 | 39.189 | 222 | 121 | 4 | 2 | 212 | 3 | 221 | 4.47e-44 | 147 |
| MS.gene063426.t1 | AT1G27130 | 36.530 | 219 | 124 | 4 | 3 | 209 | 5 | 220 | 3.61e-42 | 142 |
| MS.gene063426.t1 | AT1G74590 | 40.000 | 195 | 111 | 4 | 3 | 191 | 6 | 200 | 7.66e-42 | 142 |
| MS.gene063426.t1 | AT2G29490 | 36.279 | 215 | 133 | 2 | 5 | 216 | 8 | 221 | 3.02e-40 | 137 |
| MS.gene063426.t1 | AT1G27140 | 39.024 | 205 | 115 | 5 | 15 | 209 | 17 | 221 | 8.67e-40 | 137 |
| MS.gene063426.t1 | AT2G29470 | 36.620 | 213 | 128 | 5 | 5 | 212 | 8 | 218 | 8.81e-40 | 136 |
| MS.gene063426.t1 | AT2G29450 | 39.234 | 209 | 114 | 6 | 4 | 204 | 6 | 209 | 3.79e-39 | 134 |
| MS.gene063426.t1 | AT2G29480 | 40.000 | 205 | 115 | 6 | 5 | 204 | 8 | 209 | 5.80e-39 | 134 |
| MS.gene063426.t1 | AT2G29440 | 39.713 | 209 | 112 | 6 | 4 | 204 | 6 | 208 | 2.79e-38 | 132 |
| MS.gene063426.t1 | AT1G69920 | 35.484 | 217 | 125 | 4 | 5 | 209 | 35 | 248 | 3.57e-38 | 133 |
| MS.gene063426.t1 | AT2G29460 | 38.164 | 207 | 120 | 6 | 3 | 204 | 6 | 209 | 1.09e-37 | 131 |
| MS.gene063426.t1 | AT1G69930 | 35.849 | 212 | 129 | 3 | 5 | 209 | 13 | 224 | 1.72e-37 | 130 |
| MS.gene063426.t1 | AT5G62480 | 32.735 | 223 | 140 | 3 | 3 | 215 | 7 | 229 | 1.66e-36 | 128 |
| MS.gene063426.t1 | AT5G62480 | 27.354 | 223 | 126 | 4 | 3 | 215 | 7 | 203 | 1.11e-20 | 86.7 |
| MS.gene063426.t1 | AT5G62480 | 27.354 | 223 | 125 | 4 | 3 | 215 | 7 | 202 | 1.47e-20 | 86.3 |
Find 35 sgRNAs with CRISPR-Local
Find 167 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| AGAGAGCTCAAGCTAGATTT+TGG | 0.158333 | 2.3:-25833288 | MS.gene063426:CDS |
| CACAAATGGATTTACCATTA+TGG | 0.237873 | 2.3:+25833386 | None:intergenic |
| ACATTTGGGTTTCTTGATAT+TGG | 0.275190 | 2.3:-25831409 | MS.gene063426:CDS |
| ACTGGAATCTTCTTATGAAT+TGG | 0.280289 | 2.3:+25833415 | None:intergenic |
| TGCAATACATAGATGAAGTT+TGG | 0.296178 | 2.3:-25833348 | MS.gene063426:CDS |
| GGTTGATTATAGTGACAAAA+AGG | 0.317820 | 2.3:-25833266 | MS.gene063426:intron |
| GCATAAAACCAGCTATAAAA+AGG | 0.324151 | 2.3:+25831379 | None:intergenic |
| TTTATGGTGGTGACACATTT+GGG | 0.324656 | 2.3:-25831423 | MS.gene063426:CDS |
| GACATATGGCAACTTCAAAA+TGG | 0.325407 | 2.3:-25831350 | MS.gene063426:CDS |
| GATACATGGGCTAGCATGTT+TGG | 0.368138 | 2.3:-25833535 | MS.gene063426:CDS |
| ATTCCAGTTCTTATCCATAA+TGG | 0.369994 | 2.3:-25833400 | MS.gene063426:CDS |
| TTGGTCCAAGCCATTAGTTT+AGG | 0.371833 | 2.3:+25831316 | None:intergenic |
| TCATACACTTTCTTCTGATC+AGG | 0.396880 | 2.3:+25831256 | None:intergenic |
| ATCTCTCTCCATGCATCTCT+TGG | 0.408511 | 2.3:+25831297 | None:intergenic |
| GCTCTCTCATAAGGATTAGA+AGG | 0.410231 | 2.3:+25833304 | None:intergenic |
| TTACCATTATGGATAAGAAC+TGG | 0.430578 | 2.3:+25833397 | None:intergenic |
| AAGAAAATGTGGCTTTCAAA+AGG | 0.435917 | 2.3:-25831523 | MS.gene063426:CDS |
| AGAATATGAGGAAGGGAAGA+TGG | 0.442414 | 2.3:-25831497 | MS.gene063426:CDS |
| AACGGAGTGTCCTAAACTAA+TGG | 0.448765 | 2.3:-25831326 | MS.gene063426:CDS |
| CTAGCTTGAGCTCTCTCATA+AGG | 0.462092 | 2.3:+25833295 | None:intergenic |
| GTGAGCATTAAGAAAGTACT+TGG | 0.462381 | 2.3:-25831226 | MS.gene063426:CDS |
| AATAATTGCAGATTCACAAA+TGG | 0.471536 | 2.3:+25833372 | None:intergenic |
| AAAGGAGAAGAATATGAGGA+AGG | 0.489666 | 2.3:-25831505 | MS.gene063426:CDS |
| TTCAAAAGGAGAAGAATATG+AGG | 0.519962 | 2.3:-25831509 | MS.gene063426:CDS |
| TGGCAACTTCAAAATGGAAA+CGG | 0.530941 | 2.3:-25831344 | MS.gene063426:CDS |
| GGATTCATCTGAAGAAGTAA+AGG | 0.531810 | 2.3:+25833436 | None:intergenic |
| ATGACACTTGGAAGAAAATG+TGG | 0.537717 | 2.3:-25831534 | MS.gene063426:CDS |
| AGGTAATTCTGTTAGATACA+TGG | 0.538022 | 2.3:-25833549 | MS.gene063426:CDS |
| AAGGAGAAGAATATGAGGAA+GGG | 0.539682 | 2.3:-25831504 | MS.gene063426:CDS |
| ATATGTAGGTTTATGACACT+TGG | 0.541669 | 2.3:-25831546 | MS.gene063426:intron |
| AGTGTCCTAAACTAATGGCT+TGG | 0.548948 | 2.3:-25831321 | MS.gene063426:CDS |
| GGTAATTCTGTTAGATACAT+GGG | 0.584405 | 2.3:-25833548 | MS.gene063426:CDS |
| CTCTATCTTTAAGACACTAG+AGG | 0.601570 | 2.3:-25831467 | MS.gene063426:CDS |
| TCTATCTTTAAGACACTAGA+GGG | 0.610752 | 2.3:-25831466 | MS.gene063426:CDS |
| GGCTTGGACCAAGAGATGCA+TGG | 0.654997 | 2.3:-25831305 | MS.gene063426:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | AAATTGATTATAAAATTAAG+AGG | + | chr2.3:25831559-25831578 | None:intergenic | 10.0% |
| !! | ACAAAATTATCAATATATAT+AGG | + | chr2.3:25831935-25831954 | None:intergenic | 10.0% |
| !! | CAAAATTATCAATATATATA+GGG | + | chr2.3:25831934-25831953 | None:intergenic | 10.0% |
| !! | TAAAAAAATATTATCCATAA+AGG | - | chr2.3:25832768-25832787 | MS.gene063426:intron | 10.0% |
| !!! | CTTAATTTTATAATCAATTT+TGG | - | chr2.3:25831559-25831578 | MS.gene063426:intron | 10.0% |
| !! | AAATAAATCCACAAAAATAA+AGG | + | chr2.3:25832978-25832997 | None:intergenic | 15.0% |
| !! | AACATTATTAAAAACAAACA+AGG | - | chr2.3:25832797-25832816 | MS.gene063426:intron | 15.0% |
| !! | AATTAAGAAGCAATATATTT+AGG | - | chr2.3:25832630-25832649 | MS.gene063426:intron | 15.0% |
| !! | AGCATATTAATCTTATAATT+TGG | + | chr2.3:25831717-25831736 | None:intergenic | 15.0% |
| !!! | AAGCTTTTGTTTAATAAAAA+TGG | - | chr2.3:25832509-25832528 | MS.gene063426:intron | 15.0% |
| !!! | ATAATGTTTTTTTTCCTTTA+TGG | + | chr2.3:25832785-25832804 | None:intergenic | 15.0% |
| !!! | TAAGTCAGAAATTTTTTATA+AGG | - | chr2.3:25832030-25832049 | MS.gene063426:intron | 15.0% |
| !!! | TTATTTTTGTGGATTTATTT+TGG | - | chr2.3:25832978-25832997 | MS.gene063426:intron | 15.0% |
| !! | AAAAAGGTAACTTCTTAATT+TGG | - | chr2.3:25831525-25831544 | MS.gene063426:CDS | 20.0% |
| !! | AAAATATATACTAACAAGGA+TGG | + | chr2.3:25831890-25831909 | None:intergenic | 20.0% |
| !! | CCAAAAAATATATACTAACA+AGG | + | chr2.3:25831894-25831913 | None:intergenic | 20.0% |
| !! | GGATAAAGTAAATTAAATGA+TGG | - | chr2.3:25832168-25832187 | MS.gene063426:intron | 20.0% |
| !! | GTGCAAAATATTAGAAATTA+TGG | - | chr2.3:25831774-25831793 | MS.gene063426:intron | 20.0% |
| !! | TTATTAAACAAAAGCTTAAC+AGG | + | chr2.3:25832506-25832525 | None:intergenic | 20.0% |
| !!! | AAAATTTCTGACTTAACTTT+TGG | + | chr2.3:25832025-25832044 | None:intergenic | 20.0% |
| !!! | AAGATCACATTTTTTAGTAT+CGG | - | chr2.3:25831973-25831992 | MS.gene063426:intron | 20.0% |
| !!! | ACTTTAAACAACAATTTTCT+CGG | + | chr2.3:25832905-25832924 | None:intergenic | 20.0% |
| !!! | AGATTTTATAAGTGCTTAAT+TGG | - | chr2.3:25832454-25832473 | MS.gene063426:intron | 20.0% |
| !!! | ATAATTTGGAATATAACTCA+AGG | + | chr2.3:25831703-25831722 | None:intergenic | 20.0% |
| !!! | CCTTGTTAGTATATATTTTT+TGG | - | chr2.3:25831891-25831910 | MS.gene063426:intron | 20.0% |
| !!! | CTTTTTTTAGCTTATGAAAT+CGG | - | chr2.3:25831861-25831880 | MS.gene063426:intron | 20.0% |
| !!! | GATTTTATAAGTGCTTAATT+GGG | - | chr2.3:25832455-25832474 | MS.gene063426:intron | 20.0% |
| !!! | GTGTTCTTTATTTAATCTAA+TGG | - | chr2.3:25833136-25833155 | MS.gene063426:intron | 20.0% |
| !!! | TCTATTTTCCTTTATTTTTG+TGG | - | chr2.3:25832967-25832986 | MS.gene063426:intron | 20.0% |
| !!! | TTTTGGTCTATAAAAAGTTA+AGG | + | chr2.3:25832008-25832027 | None:intergenic | 20.0% |
| ! | AATAATTGCAGATTCACAAA+TGG | + | chr2.3:25831406-25831425 | None:intergenic | 25.0% |
| ! | ACAGAGATTAAAAAAACTGA+TGG | - | chr2.3:25832078-25832097 | MS.gene063426:intron | 25.0% |
| ! | ATATGCTTATTAGAAATCTC+AGG | - | chr2.3:25831803-25831822 | MS.gene063426:intron | 25.0% |
| ! | CAGAGATTAAAAAAACTGAT+GGG | - | chr2.3:25832079-25832098 | MS.gene063426:intron | 25.0% |
| ! | TAAAAACAAACAAGGAACTA+GGG | - | chr2.3:25832805-25832824 | MS.gene063426:intron | 25.0% |
| ! | TAAAGAACACATCTTTATCA+TGG | + | chr2.3:25833126-25833145 | None:intergenic | 25.0% |
| ! | TATGCTTATTAGAAATCTCA+GGG | - | chr2.3:25831804-25831823 | MS.gene063426:intron | 25.0% |
| ! | TTAAAAACAAACAAGGAACT+AGG | - | chr2.3:25832804-25832823 | MS.gene063426:intron | 25.0% |
| ! | TTGCTGAATCTATAATTTAG+TGG | + | chr2.3:25832396-25832415 | None:intergenic | 25.0% |
| !! | AGAAGCAATATATTTAGGAT+AGG | - | chr2.3:25832635-25832654 | MS.gene063426:intron | 25.0% |
| !! | CTTTAAACAACAATTTTCTC+GGG | + | chr2.3:25832904-25832923 | None:intergenic | 25.0% |
| !! | TCTAATATTTTGCACTTGAA+TGG | + | chr2.3:25831769-25831788 | None:intergenic | 25.0% |
| !! | TTTAAACAACAATTTTCTCG+GGG | + | chr2.3:25832903-25832922 | None:intergenic | 25.0% |
| !!! | CTGAAAATGTTATTTTCATG+TGG | + | chr2.3:25832840-25832859 | None:intergenic | 25.0% |
| !!! | GAGAAAATTGTTGTTTAAAG+TGG | - | chr2.3:25832904-25832923 | MS.gene063426:intron | 25.0% |
| !!! | GATTTATTTTGGTCAACAAA+AGG | - | chr2.3:25832989-25833008 | MS.gene063426:intron | 25.0% |
| !!! | TTTTATGCTTTTGAGACATA+TGG | - | chr2.3:25833411-25833430 | MS.gene063426:CDS | 25.0% |
| AAAAAAAACTTTCCCATGGT+GGG | - | chr2.3:25833161-25833180 | MS.gene063426:intron | 30.0% | |
| AAGAAAATGTGGCTTTCAAA+AGG | - | chr2.3:25833252-25833271 | MS.gene063426:intron | 30.0% | |
| ACTGGAATCTTCTTATGAAT+TGG | + | chr2.3:25831363-25831382 | None:intergenic | 30.0% | |
| AGGTAATTCTGTTAGATACA+TGG | - | chr2.3:25831226-25831245 | MS.gene063426:CDS | 30.0% | |
| ATATGTAGGTTTATGACACT+TGG | - | chr2.3:25833229-25833248 | MS.gene063426:intron | 30.0% | |
| ATTCCAGTTCTTATCCATAA+TGG | - | chr2.3:25831375-25831394 | MS.gene063426:CDS | 30.0% | |
| CCTACATATACATTCAAGAT+CGG | + | chr2.3:25833218-25833237 | None:intergenic | 30.0% | |
| CTGAATCTATAATTTAGTGG+TGG | + | chr2.3:25832393-25832412 | None:intergenic | 30.0% | |
| GAAGAATCTGAAAATTTCAG+CGG | - | chr2.3:25832712-25832731 | MS.gene063426:intron | 30.0% | |
| GCATAAAACCAGCTATAAAA+AGG | + | chr2.3:25833399-25833418 | None:intergenic | 30.0% | |
| GGTAATTCTGTTAGATACAT+GGG | - | chr2.3:25831227-25831246 | MS.gene063426:CDS | 30.0% | |
| GGTTGATTATAGTGACAAAA+AGG | - | chr2.3:25831509-25831528 | MS.gene063426:CDS | 30.0% | |
| GTTGAGTCAAAGCTTAAAAA+AGG | - | chr2.3:25832601-25832620 | MS.gene063426:intron | 30.0% | |
| TACCATAATCACTAGTAACT+CGG | - | chr2.3:25832552-25832571 | MS.gene063426:intron | 30.0% | |
| TAGAGTCTAATCTCATTGAA+GGG | + | chr2.3:25831608-25831627 | None:intergenic | 30.0% | |
| TATGTCCATTAGATCAAATG+AGG | - | chr2.3:25832274-25832293 | MS.gene063426:intron | 30.0% | |
| TCATCCAAAAATTAAACTCG+AGG | - | chr2.3:25831674-25831693 | MS.gene063426:intron | 30.0% | |
| TCTATAAGTAACAAAAGTCG+TGG | - | chr2.3:25832147-25832166 | MS.gene063426:intron | 30.0% | |
| TGCAATACATAGATGAAGTT+TGG | - | chr2.3:25831427-25831446 | MS.gene063426:CDS | 30.0% | |
| TTACCATTATGGATAAGAAC+TGG | + | chr2.3:25831381-25831400 | None:intergenic | 30.0% | |
| TTAGAGTCTAATCTCATTGA+AGG | + | chr2.3:25831609-25831628 | None:intergenic | 30.0% | |
| TTCAAAAGGAGAAGAATATG+AGG | - | chr2.3:25833266-25833285 | MS.gene063426:intron | 30.0% | |
| TTGTTCCTCATTTGATCTAA+TGG | + | chr2.3:25832282-25832301 | None:intergenic | 30.0% | |
| ! | ACATTTGGGTTTCTTGATAT+TGG | - | chr2.3:25833366-25833385 | MS.gene063426:CDS | 30.0% |
| ! | CACAAATGGATTTACCATTA+TGG | + | chr2.3:25831392-25831411 | None:intergenic | 30.0% |
| ! | GTTTGATTCCTTTTTATAGC+TGG | - | chr2.3:25833388-25833407 | MS.gene063426:CDS | 30.0% |
| ! | TAATATAGTGTTGAGAGAGT+AGG | + | chr2.3:25832313-25832332 | None:intergenic | 30.0% |
| ! | TGATGGACAATACAAACATT+CGG | - | chr2.3:25832185-25832204 | MS.gene063426:intron | 30.0% |
| ! | TTAAACAACAATTTTCTCGG+GGG | + | chr2.3:25832902-25832921 | None:intergenic | 30.0% |
| ! | TTAATTCGAACACGATTTTG+TGG | - | chr2.3:25832943-25832962 | MS.gene063426:intron | 30.0% |
| ! | TTTTGGTCAACAAAAGGATT+GGG | - | chr2.3:25832995-25833014 | MS.gene063426:intron | 30.0% |
| !! | ATTTTGGTCAACAAAAGGAT+TGG | - | chr2.3:25832994-25833013 | MS.gene063426:intron | 30.0% |
| !! | CGACTTTTGTTACTTATAGA+CGG | + | chr2.3:25832147-25832166 | None:intergenic | 30.0% |
| !! | TCTATCTTTAAGACACTAGA+GGG | - | chr2.3:25833309-25833328 | MS.gene063426:CDS | 30.0% |
| !!! | TTGAGTGACAAGCTTTTTTA+TGG | - | chr2.3:25833336-25833355 | MS.gene063426:CDS | 30.0% |
| AAACTGATGGGAAATTTCAC+AGG | - | chr2.3:25832091-25832110 | MS.gene063426:intron | 35.0% | |
| AAAGGAGAAGAATATGAGGA+AGG | - | chr2.3:25833270-25833289 | MS.gene063426:CDS | 35.0% | |
| AAGGAGAAGAATATGAGGAA+GGG | - | chr2.3:25833271-25833290 | MS.gene063426:CDS | 35.0% | |
| ACATATACATTCAAGATCGG+TGG | + | chr2.3:25833215-25833234 | None:intergenic | 35.0% | |
| ATAATCAACTTTCCCATGGT+GGG | + | chr2.3:25832257-25832276 | None:intergenic | 35.0% | |
| ATGACACTTGGAAGAAAATG+TGG | - | chr2.3:25833241-25833260 | MS.gene063426:intron | 35.0% | |
| ATTTAGTGGTGGTTGTGATA+TGG | + | chr2.3:25832382-25832401 | None:intergenic | 35.0% | |
| CAAAAAAAACTTTCCCATGG+TGG | - | chr2.3:25833160-25833179 | MS.gene063426:intron | 35.0% | |
| CAAAATACGAGAACTGATTG+TGG | - | chr2.3:25832671-25832690 | MS.gene063426:intron | 35.0% | |
| CATATACATTCAAGATCGGT+GGG | + | chr2.3:25833214-25833233 | None:intergenic | 35.0% | |
| CCGATCTTGAATGTATATGT+AGG | - | chr2.3:25833215-25833234 | MS.gene063426:intron | 35.0% | |
| CTATTTACCCAAAGACACTT+TGG | - | chr2.3:25832478-25832497 | MS.gene063426:intron | 35.0% | |
| GACATATGGCAACTTCAAAA+TGG | - | chr2.3:25833425-25833444 | MS.gene063426:CDS | 35.0% | |
| GGACAAAAAAAACTTTCCCA+TGG | - | chr2.3:25833157-25833176 | MS.gene063426:intron | 35.0% | |
| GGATTCATCTGAAGAAGTAA+AGG | + | chr2.3:25831342-25831361 | None:intergenic | 35.0% | |
| TCATACACTTTCTTCTGATC+AGG | + | chr2.3:25833522-25833541 | None:intergenic | 35.0% | |
| TGGCAACTTCAAAATGGAAA+CGG | - | chr2.3:25833431-25833450 | MS.gene063426:CDS | 35.0% | |
| TGTTGGAAGATATTGTGAAG+TGG | - | chr2.3:25833043-25833062 | MS.gene063426:intron | 35.0% | |
| TTGAAGGTGGGATTTAGTAT+GGG | - | chr2.3:25832216-25832235 | MS.gene063426:intron | 35.0% | |
| TTTAGTGGTGGTTGTGATAT+GGG | + | chr2.3:25832381-25832400 | None:intergenic | 35.0% | |
| ! | ATTGTGGTATTTTCACTTCG+TGG | - | chr2.3:25832687-25832706 | MS.gene063426:intron | 35.0% |
| ! | TTTATGGTGGTGACACATTT+GGG | - | chr2.3:25833352-25833371 | MS.gene063426:CDS | 35.0% |
| !! | ACATTCGGTATTGATCTTGA+AGG | - | chr2.3:25832200-25832219 | MS.gene063426:intron | 35.0% |
| !! | CTCTATCTTTAAGACACTAG+AGG | - | chr2.3:25833308-25833327 | MS.gene063426:CDS | 35.0% |
| !! | GAAGCCTCGAGTTTAATTTT+TGG | + | chr2.3:25831681-25831700 | None:intergenic | 35.0% |
| !! | GTGAGCATTAAGAAAGTACT+TGG | - | chr2.3:25833549-25833568 | MS.gene063426:CDS | 35.0% |
| !! | TTTTATGGTGGTGACACATT+TGG | - | chr2.3:25833351-25833370 | MS.gene063426:CDS | 35.0% |
| !!! | AGTGACAAGCTTTTTTATGG+TGG | - | chr2.3:25833339-25833358 | MS.gene063426:CDS | 35.0% |
| AAGATCGGTGGGATTTAGTA+TGG | + | chr2.3:25833203-25833222 | None:intergenic | 40.0% | |
| AAGGAGGAAGATGAGTTAGA+GGG | - | chr2.3:25833073-25833092 | MS.gene063426:intron | 40.0% | |
| AGAATATGAGGAAGGGAAGA+TGG | - | chr2.3:25833278-25833297 | MS.gene063426:CDS | 40.0% | |
| AGATCGGTGGGATTTAGTAT+GGG | + | chr2.3:25833202-25833221 | None:intergenic | 40.0% | |
| AGTGTCCTAAACTAATGGCT+TGG | - | chr2.3:25833454-25833473 | MS.gene063426:CDS | 40.0% | |
| CACAGGAACGGTAAAAAATG+TGG | - | chr2.3:25832108-25832127 | MS.gene063426:intron | 40.0% | |
| CACCGAGTTACTAGTGATTA+TGG | + | chr2.3:25832557-25832576 | None:intergenic | 40.0% | |
| CATAATCAACTTTCCCATGG+TGG | + | chr2.3:25832258-25832277 | None:intergenic | 40.0% | |
| CTTGAAGGTGGGATTTAGTA+TGG | - | chr2.3:25832215-25832234 | MS.gene063426:intron | 40.0% | |
| GATGGGAAATTTCACAGGAA+CGG | - | chr2.3:25832096-25832115 | MS.gene063426:intron | 40.0% | |
| GCTCTCTCATAAGGATTAGA+AGG | + | chr2.3:25831474-25831493 | None:intergenic | 40.0% | |
| GGAAGATATTGTGAAGTGGT+GGG | - | chr2.3:25833047-25833066 | MS.gene063426:intron | 40.0% | |
| GGACATAATCAACTTTCCCA+TGG | + | chr2.3:25832261-25832280 | None:intergenic | 40.0% | |
| TGGAAGATATTGTGAAGTGG+TGG | - | chr2.3:25833046-25833065 | MS.gene063426:intron | 40.0% | |
| TGGGATTTAGTATGGGAAAG+TGG | - | chr2.3:25832223-25832242 | MS.gene063426:intron | 40.0% | |
| ! | AACAGGAACCAAAGTGTCTT+TGG | + | chr2.3:25832489-25832508 | None:intergenic | 40.0% |
| ! | AACGGAGTGTCCTAAACTAA+TGG | - | chr2.3:25833449-25833468 | MS.gene063426:CDS | 40.0% |
| ! | ACAATTTTCTCGGGGGTTTT+TGG | + | chr2.3:25832895-25832914 | None:intergenic | 40.0% |
| ! | ACAGGAACCAAAGTGTCTTT+GGG | + | chr2.3:25832488-25832507 | None:intergenic | 40.0% |
| ! | AGAGAGCTCAAGCTAGATTT+TGG | - | chr2.3:25831487-25831506 | MS.gene063426:CDS | 40.0% |
| ! | ATCTTCCAACACCTTTTCCA+TGG | + | chr2.3:25833034-25833053 | None:intergenic | 40.0% |
| ! | GAGAGCTCAAGCTAGATTTT+GGG | - | chr2.3:25831488-25831507 | MS.gene063426:CDS | 40.0% |
| ! | TTGGTCCAAGCCATTAGTTT+AGG | + | chr2.3:25833462-25833481 | None:intergenic | 40.0% |
| !! | TCGGTATTGATCTTGAAGGT+GGG | - | chr2.3:25832204-25832223 | MS.gene063426:intron | 40.0% |
| !! | TTCGGTATTGATCTTGAAGG+TGG | - | chr2.3:25832203-25832222 | MS.gene063426:intron | 40.0% |
| !!! | CTCGTATTTTGATGTTTCGC+TGG | + | chr2.3:25832662-25832681 | None:intergenic | 40.0% |
| AAGATGAGTTAGAGGGTGAG+TGG | - | chr2.3:25833080-25833099 | MS.gene063426:intron | 45.0% | |
| ATCTCTCTCCATGCATCTCT+TGG | + | chr2.3:25833481-25833500 | None:intergenic | 45.0% | |
| CAAGGAGGAAGATGAGTTAG+AGG | - | chr2.3:25833072-25833091 | MS.gene063426:intron | 45.0% | |
| CTAGCTTGAGCTCTCTCATA+AGG | + | chr2.3:25831483-25831502 | None:intergenic | 45.0% | |
| GGTGGGATTTAGTATGGGAA+AGG | + | chr2.3:25832240-25832221 | None:intergenic | 45.0% | |
| TCAACAAAAGGATTGGGTGG+TGG | - | chr2.3:25833001-25833020 | MS.gene063426:intron | 45.0% | |
| TGGTCAACAAAAGGATTGGG+TGG | - | chr2.3:25832998-25833017 | MS.gene063426:intron | 45.0% | |
| TGTGGAGACATGAAAGAGGA+GGG | + | chr2.3:25832356-25832375 | None:intergenic | 45.0% | |
| ! | GAGTTTTCCAGTAGCAACCA+TGG | + | chr2.3:25832432-25832451 | None:intergenic | 45.0% |
| ! | TTTTCCAGTAGCAACCATGG+TGG | + | chr2.3:25832429-25832448 | None:intergenic | 45.0% |
| !! | GATACATGGGCTAGCATGTT+TGG | - | chr2.3:25831240-25831259 | MS.gene063426:CDS | 45.0% |
| !!! | AGTGGTGTTTTTTCCCACCA+TGG | - | chr2.3:25832241-25832260 | MS.gene063426:intron | 45.0% |
| !!! | GTGGTGTTTTTTCCCACCAT+GGG | - | chr2.3:25832242-25832261 | MS.gene063426:intron | 45.0% |
| GGTGTGTGGAGACATGAAAG+AGG | + | chr2.3:25832360-25832379 | None:intergenic | 50.0% | |
| GTGGTTGTGATATGGGTGTG+TGG | + | chr2.3:25832374-25832393 | None:intergenic | 50.0% | |
| GTGTGGAGACATGAAAGAGG+AGG | + | chr2.3:25832357-25832376 | None:intergenic | 50.0% | |
| ! | ACAAAAGGATTGGGTGGTGG+TGG | - | chr2.3:25833004-25833023 | MS.gene063426:intron | 50.0% |
| ! | AGGAGAGTTGTTTCCCACCA+TGG | + | chr2.3:25833177-25833196 | None:intergenic | 50.0% |
| ! | ATTGTGAAGTGGTGGGAGCA+AGG | - | chr2.3:25833054-25833073 | MS.gene063426:intron | 50.0% |
| ! | GGAGAGTTGTTTCCCACCAT+GGG | + | chr2.3:25833176-25833195 | None:intergenic | 50.0% |
| CACACCACCATGGTTGCTAC+TGG | - | chr2.3:25832422-25832441 | MS.gene063426:intron | 55.0% | |
| GGAGACATGAAAGAGGAGGG+TGG | + | chr2.3:25832353-25832372 | None:intergenic | 55.0% | |
| GGCTTGGACCAAGAGATGCA+TGG | - | chr2.3:25833470-25833489 | MS.gene063426:CDS | 55.0% | |
| ! | GACGGCCATGGAAAAGGTGT+TGG | - | chr2.3:25833026-25833045 | MS.gene063426:intron | 55.0% |
| ! | GTAGCAACCATGGTGGTGTG+TGG | + | chr2.3:25832422-25832441 | None:intergenic | 55.0% |
| !! | AAGGATTGGGTGGTGGTGGA+CGG | - | chr2.3:25833008-25833027 | MS.gene063426:intron | 55.0% |
| GCAACCACCACACACCACCA+TGG | - | chr2.3:25832412-25832431 | MS.gene063426:intron | 60.0% | |
| ! | GCAACCATGGTGGTGTGTGG+TGG | + | chr2.3:25832419-25832438 | None:intergenic | 60.0% |
| ! | GTGAAGTGGTGGGAGCAAGG+AGG | - | chr2.3:25833057-25833076 | MS.gene063426:intron | 60.0% |
| !! | GTGGTGGACGGCCATGGAAA+AGG | - | chr2.3:25833020-25833039 | MS.gene063426:intron | 60.0% |
| !! | TGGGTGGTGGTGGACGGCCA+TGG | - | chr2.3:25833014-25833033 | MS.gene063426:intron | 70.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr2.3 | gene | 25831216 | 25833581 | 25831216 | ID=MS.gene063426 |
| chr2.3 | mRNA | 25831216 | 25833581 | 25831216 | ID=MS.gene063426.t1;Parent=MS.gene063426 |
| chr2.3 | exon | 25833267 | 25833581 | 25833267 | ID=MS.gene063426.t1.exon1;Parent=MS.gene063426.t1 |
| chr2.3 | CDS | 25833267 | 25833581 | 25833267 | ID=cds.MS.gene063426.t1;Parent=MS.gene063426.t1 |
| chr2.3 | exon | 25831216 | 25831560 | 25831216 | ID=MS.gene063426.t1.exon2;Parent=MS.gene063426.t1 |
| chr2.3 | CDS | 25831216 | 25831560 | 25831216 | ID=cds.MS.gene063426.t1;Parent=MS.gene063426.t1 |
| Gene Sequence |
| Protein sequence |
