Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene069435.t1 | XP_024631447.1 | 99 | 415 | 4 | 0 | 1 | 415 | 1 | 415 | 1.00E-236 | 828.9 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene069435.t1 | Q9SJE2 | 76.5 | 405 | 86 | 5 | 1 | 399 | 1 | 402 | 5.2e-173 | 608.6 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene069435.t1 | A0A396JAN8 | 99.0 | 415 | 4 | 0 | 1 | 415 | 1 | 415 | 7.3e-237 | 828.9 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| MS.gene049356 | MS.gene069435 | 0.89064 | 8.21E-74 | -1.69E-46 |
| MS.gene049369 | MS.gene069435 | 0.894373 | 2.62E-75 | -1.69E-46 |
| MS.gene049396 | MS.gene069435 | 0.831133 | 1.98E-55 | -1.69E-46 |
| MS.gene049491 | MS.gene069435 | 0.805974 | 1.03E-49 | -1.69E-46 |
| MS.gene049805 | MS.gene069435 | 0.802674 | 5.02E-49 | -1.69E-46 |
| MS.gene049907 | MS.gene069435 | 0.84309 | 1.73E-58 | -1.69E-46 |
| MS.gene050122 | MS.gene069435 | 0.819042 | 1.43E-52 | -1.69E-46 |
| MS.gene050128 | MS.gene069435 | 0.836938 | 6.98E-57 | -1.69E-46 |
| MS.gene050215 | MS.gene069435 | 0.804538 | 2.06E-49 | -1.69E-46 |
| MS.gene050301 | MS.gene069435 | 0.834005 | 3.85E-56 | -1.69E-46 |
| MS.gene050432 | MS.gene069435 | 0.801388 | 9.22E-49 | -1.69E-46 |
| MS.gene050499 | MS.gene069435 | 0.830003 | 3.75E-55 | -1.69E-46 |
| MS.gene050520 | MS.gene069435 | 0.829737 | 4.35E-55 | -1.69E-46 |
| MS.gene050593 | MS.gene069435 | 0.814044 | 1.88E-51 | -1.69E-46 |
| MS.gene050625 | MS.gene069435 | 0.801099 | 1.06E-48 | -1.69E-46 |
| MS.gene050670 | MS.gene069435 | 0.854062 | 1.58E-61 | -1.69E-46 |
| MS.gene050686 | MS.gene069435 | 0.820365 | 7.13E-53 | -1.69E-46 |
| MS.gene050971 | MS.gene069435 | 0.838447 | 2.86E-57 | -1.69E-46 |
| MS.gene05105 | MS.gene069435 | 0.850026 | 2.22E-60 | -1.69E-46 |
| MS.gene051255 | MS.gene069435 | 0.81925 | 1.28E-52 | -1.69E-46 |
| MS.gene051360 | MS.gene069435 | 0.900999 | 4.17E-78 | -1.69E-46 |
| MS.gene051387 | MS.gene069435 | 0.845316 | 4.38E-59 | -1.69E-46 |
| MS.gene051692 | MS.gene069435 | 0.845499 | 3.91E-59 | -1.69E-46 |
| MS.gene052188 | MS.gene069435 | 0.863301 | 2.74E-64 | -1.69E-46 |
| MS.gene052253 | MS.gene069435 | 0.83109 | 2.03E-55 | -1.69E-46 |
| MS.gene052310 | MS.gene069435 | 0.800526 | 1.38E-48 | -1.69E-46 |
| MS.gene052340 | MS.gene069435 | 0.833802 | 4.33E-56 | -1.69E-46 |
| MS.gene052414 | MS.gene069435 | 0.823242 | 1.54E-53 | -1.69E-46 |
| MS.gene052421 | MS.gene069435 | 0.827748 | 1.32E-54 | -1.69E-46 |
| MS.gene052481 | MS.gene069435 | 0.803253 | 3.81E-49 | -1.69E-46 |
| MS.gene052484 | MS.gene069435 | 0.831015 | 2.12E-55 | -1.69E-46 |
| MS.gene052485 | MS.gene069435 | 0.882815 | 7.59E-71 | -1.69E-46 |
| MS.gene052999 | MS.gene069435 | 0.821245 | 4.47E-53 | -1.69E-46 |
| MS.gene053103 | MS.gene069435 | 0.804246 | 2.37E-49 | -1.69E-46 |
| MS.gene053169 | MS.gene069435 | 0.839064 | 1.98E-57 | -1.69E-46 |
| MS.gene05316 | MS.gene069435 | 0.846778 | 1.75E-59 | -1.69E-46 |
| MS.gene053209 | MS.gene069435 | 0.841247 | 5.34E-58 | -1.69E-46 |
| MS.gene05335 | MS.gene069435 | 0.807754 | 4.33E-50 | -1.69E-46 |
| MS.gene053449 | MS.gene069435 | 0.870486 | 1.41E-66 | -1.69E-46 |
| MS.gene053505 | MS.gene069435 | 0.800767 | 1.23E-48 | -1.69E-46 |
| MS.gene053758 | MS.gene069435 | 0.836816 | 7.50E-57 | -1.69E-46 |
| MS.gene053813 | MS.gene069435 | 0.897667 | 1.13E-76 | -1.69E-46 |
| MS.gene053912 | MS.gene069435 | 0.827419 | 1.58E-54 | -1.69E-46 |
| MS.gene054010 | MS.gene069435 | 0.833429 | 5.36E-56 | -1.69E-46 |
| MS.gene054011 | MS.gene069435 | 0.813458 | 2.53E-51 | -1.69E-46 |
| MS.gene054012 | MS.gene069435 | 0.823917 | 1.07E-53 | -1.69E-46 |
| MS.gene054013 | MS.gene069435 | 0.824814 | 6.58E-54 | -1.69E-46 |
| MS.gene054123 | MS.gene069435 | 0.830839 | 2.34E-55 | -1.69E-46 |
| MS.gene054486 | MS.gene069435 | 0.804458 | 2.14E-49 | -1.69E-46 |
| MS.gene054556 | MS.gene069435 | 0.838046 | 3.63E-57 | -1.69E-46 |
| MS.gene05492 | MS.gene069435 | 0.806879 | 6.64E-50 | -1.69E-46 |
| MS.gene05505 | MS.gene069435 | 0.832354 | 9.92E-56 | -1.69E-46 |
| MS.gene055116 | MS.gene069435 | 0.836023 | 1.19E-56 | -1.69E-46 |
| MS.gene055277 | MS.gene069435 | 0.800734 | 1.25E-48 | -1.69E-46 |
| MS.gene055412 | MS.gene069435 | 0.806103 | 9.68E-50 | -1.69E-46 |
| MS.gene055633 | MS.gene069435 | 0.841831 | 3.74E-58 | -1.69E-46 |
| MS.gene055666 | MS.gene069435 | 0.841593 | 4.32E-58 | -1.69E-46 |
| MS.gene055722 | MS.gene069435 | 0.80688 | 6.64E-50 | -1.69E-46 |
| MS.gene055741 | MS.gene069435 | 0.816923 | 4.31E-52 | -1.69E-46 |
| MS.gene055744 | MS.gene069435 | 0.821595 | 3.71E-53 | -1.69E-46 |
| MS.gene055802 | MS.gene069435 | 0.83292 | 7.18E-56 | -1.69E-46 |
| MS.gene055909 | MS.gene069435 | 0.869894 | 2.20E-66 | -1.69E-46 |
| MS.gene055911 | MS.gene069435 | 0.874 | 9.50E-68 | -1.69E-46 |
| MS.gene05592 | MS.gene069435 | 0.827369 | 1.63E-54 | -1.69E-46 |
| MS.gene056166 | MS.gene069435 | 0.809945 | 1.47E-50 | -1.69E-46 |
| MS.gene056191 | MS.gene069435 | 0.846747 | 1.79E-59 | -1.69E-46 |
| MS.gene056407 | MS.gene069435 | 0.819752 | 9.85E-53 | -1.69E-46 |
| MS.gene056410 | MS.gene069435 | 0.848454 | 6.07E-60 | -1.69E-46 |
| MS.gene056422 | MS.gene069435 | 0.878959 | 1.84E-69 | -1.69E-46 |
| MS.gene056448 | MS.gene069435 | 0.812712 | 3.69E-51 | -1.69E-46 |
| MS.gene056511 | MS.gene069435 | 0.867298 | 1.52E-65 | -1.69E-46 |
| MS.gene056659 | MS.gene069435 | 0.812495 | 4.12E-51 | -1.69E-46 |
| MS.gene056902 | MS.gene069435 | 0.840743 | 7.24E-58 | -1.69E-46 |
| MS.gene056931 | MS.gene069435 | 0.828147 | 1.06E-54 | -1.69E-46 |
| MS.gene056933 | MS.gene069435 | 0.829555 | 4.82E-55 | -1.69E-46 |
| MS.gene056935 | MS.gene069435 | 0.815929 | 7.19E-52 | -1.69E-46 |
| MS.gene057076 | MS.gene069435 | 0.811196 | 7.90E-51 | -1.69E-46 |
| MS.gene057124 | MS.gene069435 | 0.809735 | 1.63E-50 | -1.69E-46 |
| MS.gene057146 | MS.gene069435 | 0.813796 | 2.14E-51 | -1.69E-46 |
| MS.gene057285 | MS.gene069435 | 0.830393 | 3.01E-55 | -1.69E-46 |
| MS.gene057331 | MS.gene069435 | 0.804764 | 1.85E-49 | -1.69E-46 |
| MS.gene05735 | MS.gene069435 | 0.801756 | 7.75E-49 | -1.69E-46 |
| MS.gene057448 | MS.gene069435 | 0.855338 | 6.74E-62 | -1.69E-46 |
| MS.gene057449 | MS.gene069435 | 0.85739 | 1.69E-62 | -1.69E-46 |
| MS.gene057450 | MS.gene069435 | 0.853144 | 2.90E-61 | -1.69E-46 |
| MS.gene057469 | MS.gene069435 | 0.807036 | 6.15E-50 | -1.69E-46 |
| MS.gene057537 | MS.gene069435 | 0.839691 | 1.36E-57 | -1.69E-46 |
| MS.gene057610 | MS.gene069435 | 0.822725 | 2.03E-53 | -1.69E-46 |
| MS.gene057734 | MS.gene069435 | 0.837123 | 6.26E-57 | -1.69E-46 |
| MS.gene057749 | MS.gene069435 | 0.846017 | 2.83E-59 | -1.69E-46 |
| MS.gene057823 | MS.gene069435 | 0.851151 | 1.07E-60 | -1.69E-46 |
| MS.gene057856 | MS.gene069435 | 0.812861 | 3.43E-51 | -1.69E-46 |
| MS.gene057926 | MS.gene069435 | 0.819244 | 1.29E-52 | -1.69E-46 |
| MS.gene057927 | MS.gene069435 | 0.800312 | 1.53E-48 | -1.69E-46 |
| MS.gene058006 | MS.gene069435 | 0.804409 | 2.19E-49 | -1.69E-46 |
| MS.gene058007 | MS.gene069435 | 0.870705 | 1.19E-66 | -1.69E-46 |
| MS.gene058075 | MS.gene069435 | 0.863427 | 2.51E-64 | -1.69E-46 |
| MS.gene058082 | MS.gene069435 | 0.800299 | 1.54E-48 | -1.69E-46 |
| MS.gene05811 | MS.gene069435 | 0.813521 | 2.45E-51 | -1.69E-46 |
| MS.gene058120 | MS.gene069435 | 0.835158 | 1.97E-56 | -1.69E-46 |
| MS.gene058376 | MS.gene069435 | 0.807804 | 4.23E-50 | -1.69E-46 |
| MS.gene05842 | MS.gene069435 | 0.83417 | 3.50E-56 | -1.69E-46 |
| MS.gene058459 | MS.gene069435 | 0.825763 | 3.93E-54 | -1.69E-46 |
| MS.gene058660 | MS.gene069435 | 0.824595 | 7.41E-54 | -1.69E-46 |
| MS.gene058700 | MS.gene069435 | 0.843795 | 1.13E-58 | -1.69E-46 |
| MS.gene058790 | MS.gene069435 | 0.840299 | 9.45E-58 | -1.69E-46 |
| MS.gene058928 | MS.gene069435 | 0.84313 | 1.69E-58 | -1.69E-46 |
| MS.gene058948 | MS.gene069435 | 0.851763 | 7.18E-61 | -1.69E-46 |
| MS.gene058949 | MS.gene069435 | 0.827887 | 1.22E-54 | -1.69E-46 |
| MS.gene058995 | MS.gene069435 | 0.849164 | 3.85E-60 | -1.69E-46 |
| MS.gene05907 | MS.gene069435 | 0.850799 | 1.34E-60 | -1.69E-46 |
| MS.gene059294 | MS.gene069435 | 0.819684 | 1.02E-52 | -1.69E-46 |
| MS.gene059366 | MS.gene069435 | 0.852087 | 5.81E-61 | -1.69E-46 |
| MS.gene059368 | MS.gene069435 | 0.836644 | 8.29E-57 | -1.69E-46 |
| MS.gene059420 | MS.gene069435 | 0.844749 | 6.23E-59 | -1.69E-46 |
| MS.gene059455 | MS.gene069435 | 0.814748 | 1.32E-51 | -1.69E-46 |
| MS.gene059529 | MS.gene069435 | 0.805952 | 1.04E-49 | -1.69E-46 |
| MS.gene059530 | MS.gene069435 | 0.835111 | 2.03E-56 | -1.69E-46 |
| MS.gene059536 | MS.gene069435 | 0.805263 | 1.45E-49 | -1.69E-46 |
| MS.gene059597 | MS.gene069435 | 0.817503 | 3.19E-52 | -1.69E-46 |
| MS.gene059674 | MS.gene069435 | 0.893181 | 7.98E-75 | -1.69E-46 |
| MS.gene059676 | MS.gene069435 | 0.851873 | 6.68E-61 | -1.69E-46 |
| MS.gene059680 | MS.gene069435 | 0.805908 | 1.06E-49 | -1.69E-46 |
| MS.gene059688 | MS.gene069435 | 0.875949 | 2.06E-68 | -1.69E-46 |
| MS.gene059692 | MS.gene069435 | 0.858586 | 7.44E-63 | -1.69E-46 |
| MS.gene059695 | MS.gene069435 | 0.85611 | 4.01E-62 | -1.69E-46 |
| MS.gene059711 | MS.gene069435 | 0.898701 | 4.10E-77 | -1.69E-46 |
| MS.gene059807 | MS.gene069435 | 0.887423 | 1.45E-72 | -1.69E-46 |
| MS.gene05986 | MS.gene069435 | 0.823006 | 1.75E-53 | -1.69E-46 |
| MS.gene059876 | MS.gene069435 | 0.819258 | 1.28E-52 | -1.69E-46 |
| MS.gene059974 | MS.gene069435 | 0.823108 | 1.65E-53 | -1.69E-46 |
| MS.gene060356 | MS.gene069435 | 0.801691 | 7.99E-49 | -1.69E-46 |
| MS.gene060372 | MS.gene069435 | 0.836327 | 9.98E-57 | -1.69E-46 |
| MS.gene060401 | MS.gene069435 | 0.803318 | 3.69E-49 | -1.69E-46 |
| MS.gene060403 | MS.gene069435 | 0.822953 | 1.80E-53 | -1.69E-46 |
| MS.gene060495 | MS.gene069435 | 0.811898 | 5.56E-51 | -1.69E-46 |
| MS.gene060559 | MS.gene069435 | 0.817509 | 3.18E-52 | -1.69E-46 |
| MS.gene060569 | MS.gene069435 | 0.80351 | 3.37E-49 | -1.69E-46 |
| MS.gene060804 | MS.gene069435 | 0.831784 | 1.37E-55 | -1.69E-46 |
| MS.gene060818 | MS.gene069435 | 0.812256 | 4.65E-51 | -1.69E-46 |
| MS.gene060837 | MS.gene069435 | 0.909842 | 3.64E-82 | -1.69E-46 |
| MS.gene060986 | MS.gene069435 | 0.823863 | 1.10E-53 | -1.69E-46 |
| MS.gene061041 | MS.gene069435 | 0.808612 | 2.84E-50 | -1.69E-46 |
| MS.gene061049 | MS.gene069435 | 0.800535 | 1.38E-48 | -1.69E-46 |
| MS.gene061051 | MS.gene069435 | -0.837836 | 4.11E-57 | -1.69E-46 |
| MS.gene061154 | MS.gene069435 | 0.821331 | 4.27E-53 | -1.69E-46 |
| MS.gene061200 | MS.gene069435 | 0.802031 | 6.80E-49 | -1.69E-46 |
PPI:
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene069435.t1 | MTR_4g112970 | 78.922 | 408 | 79 | 5 | 12 | 415 | 10 | 414 | 0.0 | 652 |
| MS.gene069435.t1 | MTR_3g099020 | 56.584 | 281 | 113 | 4 | 128 | 399 | 103 | 383 | 7.51e-107 | 320 |
| MS.gene069435.t1 | MTR_1g109110 | 49.446 | 271 | 117 | 2 | 121 | 391 | 75 | 325 | 1.93e-87 | 271 |
| MS.gene069435.t1 | MTR_7g056233 | 45.333 | 300 | 143 | 6 | 121 | 399 | 67 | 366 | 9.67e-84 | 261 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene069435.t1 | AT1G08510 | 76.296 | 405 | 87 | 5 | 1 | 399 | 1 | 402 | 0.0 | 608 |
| MS.gene069435.t1 | AT3G25110 | 46.644 | 298 | 136 | 7 | 121 | 400 | 68 | 360 | 1.10e-89 | 276 |
| MS.gene069435.t1 | AT4G13050 | 44.482 | 299 | 141 | 5 | 123 | 399 | 69 | 364 | 3.21e-86 | 267 |
Find 104 sgRNAs with CRISPR-Local
Find 166 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| TCAAAATTGTTGATAGGTTT+TGG | 0.207603 | 2.2:+30596608 | None:intergenic |
| TCGATTAGATCGTACGAAAT+AGG | 0.231767 | 2.2:-30598747 | MS.gene069435:CDS |
| GAGTGCTCCACAGCCAATTT+TGG | 0.252533 | 2.2:-30596822 | MS.gene069435:CDS |
| TGTCAAGATTTCCCCTGTTT+TGG | 0.256851 | 2.2:+30597826 | None:intergenic |
| AACCGCAGTTCCGTTGATTT+TGG | 0.259020 | 2.2:+30599004 | None:intergenic |
| GTTAAGACTGCCGGGCTTCT+TGG | 0.280843 | 2.2:-30598557 | MS.gene069435:CDS |
| AGCTCATGACTCTCCAAAAT+TGG | 0.291578 | 2.2:+30596809 | None:intergenic |
| CTTGTGCGGGACGCCAAAAC+AGG | 0.319851 | 2.2:-30597839 | MS.gene069435:CDS |
| ACGATCTAATCGAAAAGTTT+TGG | 0.327229 | 2.2:+30598757 | None:intergenic |
| ATGATGGTGCCGAGATTGTT+AGG | 0.330723 | 2.2:-30596649 | MS.gene069435:CDS |
| ATCTCTCCTCTGACCTCTTC+CGG | 0.338263 | 2.2:+30597432 | None:intergenic |
| CTGTTATCCTCGTCCACAAC+TGG | 0.341684 | 2.2:+30597384 | None:intergenic |
| TCATCAATCAGTTGCCTGAT+TGG | 0.344132 | 2.2:-30598923 | MS.gene069435:CDS |
| GACGTTAATGAATCATTTGC+AGG | 0.353941 | 2.2:-30598700 | MS.gene069435:intron |
| GAAGTACATTGGGTGGATTC+TGG | 0.356450 | 2.2:-30597174 | MS.gene069435:CDS |
| AGAACATCAAAATTGTTGAT+AGG | 0.357493 | 2.2:+30596602 | None:intergenic |
| TGGTATAGGGAAAATTGTTC+AGG | 0.362930 | 2.2:-30598796 | MS.gene069435:CDS |
| GATATGCTTGTTGACCCTTT+TGG | 0.364899 | 2.2:-30598816 | MS.gene069435:CDS |
| GGGCTTCTTGGTGATGGCTT+TGG | 0.374601 | 2.2:-30598545 | MS.gene069435:CDS |
| CTTCTCAGCAGCAAGGAAAA+TGG | 0.375814 | 2.2:+30598875 | None:intergenic |
| AAATCCAAGCAAAGCTCTAA+TGG | 0.383578 | 2.2:-30599056 | MS.gene069435:CDS |
| AGCAGAACTAACTCCATGTT+TGG | 0.390225 | 2.2:+30599094 | None:intergenic |
| GATGAAGATGATGATGTAAC+AGG | 0.397644 | 2.2:+30599137 | None:intergenic |
| GACACTTGGGTTTCTGCGGC+AGG | 0.408861 | 2.2:-30597887 | MS.gene069435:CDS |
| ACTAACTAAACTTGATGATT+CGG | 0.409649 | 2.2:-30597358 | MS.gene069435:CDS |
| AAAGGGTCAACAAGCATATC+AGG | 0.416344 | 2.2:+30598819 | None:intergenic |
| AACATCTAGATCATTCCATC+TGG | 0.417317 | 2.2:+30597217 | None:intergenic |
| TTTGATGTTCGACAGTGTTT+GGG | 0.430706 | 2.2:-30597493 | MS.gene069435:intron |
| GAGATTGTTAGGGGTAGAAC+TGG | 0.433933 | 2.2:-30596638 | MS.gene069435:CDS |
| CAGTCCCTGACATCTGTCTC+TGG | 0.445222 | 2.2:-30596734 | MS.gene069435:CDS |
| GCAAGAAGCATGCTCCAATC+AGG | 0.445777 | 2.2:+30598909 | None:intergenic |
| TGAGCTGCATTCCATGACTT+TGG | 0.456877 | 2.2:-30596792 | MS.gene069435:CDS |
| AAGGAAACTATCTAAAATTC+CGG | 0.457461 | 2.2:-30597451 | MS.gene069435:CDS |
| CTTAATCATGTTAAGACTGC+CGG | 0.467906 | 2.2:-30598566 | MS.gene069435:CDS |
| AGCAGTGGATGATGCTTGAT+TGG | 0.473258 | 2.2:-30598854 | MS.gene069435:CDS |
| GTTAGTTCTGCTAACCTTGG+AGG | 0.478639 | 2.2:-30599083 | MS.gene069435:CDS |
| AAAATGGTATGCGTCGTGAT+TGG | 0.485644 | 2.2:-30597862 | MS.gene069435:CDS |
| TCTGTCTCTGGTGCTGACAT+TGG | 0.489613 | 2.2:-30596722 | MS.gene069435:CDS |
| AACTGATTGATGAATGTCCT+TGG | 0.491484 | 2.2:+30598933 | None:intergenic |
| TGATGGTGCCGAGATTGTTA+GGG | 0.496988 | 2.2:-30596648 | MS.gene069435:CDS |
| TTCTGATCCAGTTGTGGACG+AGG | 0.498778 | 2.2:-30597391 | MS.gene069435:CDS |
| ACTGCCGGGCTTCTTGGTGA+TGG | 0.499989 | 2.2:-30598551 | MS.gene069435:CDS |
| AAAGCCATCACCAAGAAGCC+CGG | 0.500537 | 2.2:+30598547 | None:intergenic |
| ACTATCTAAAATTCCGGAAG+AGG | 0.500584 | 2.2:-30597445 | MS.gene069435:CDS |
| TGTTACTCGGATGCAGGTTG+TGG | 0.502339 | 2.2:-30598483 | MS.gene069435:CDS |
| AACATTTAGGTGCTCTGTGA+TGG | 0.506232 | 2.2:+30596569 | None:intergenic |
| GTTAATAATGTGAAGTACAT+TGG | 0.509594 | 2.2:-30597185 | MS.gene069435:CDS |
| ATTCCATGACTTTGGAGTAC+AGG | 0.511740 | 2.2:-30596784 | MS.gene069435:CDS |
| CACTTGCTTCGACTCGATGA+TGG | 0.516598 | 2.2:-30596665 | MS.gene069435:CDS |
| ACTTGATATGGGTTGTTACT+CGG | 0.517014 | 2.2:-30598496 | MS.gene069435:CDS |
| AGAACTAACTCCATGTTTGG+AGG | 0.519503 | 2.2:+30599097 | None:intergenic |
| TCGGCTGAATATATTCGCAC+TGG | 0.521996 | 2.2:-30597339 | MS.gene069435:CDS |
| TAAGCCATTAGAGCTTTGCT+TGG | 0.523646 | 2.2:+30599052 | None:intergenic |
| TTAATAATGTGAAGTACATT+GGG | 0.528885 | 2.2:-30597184 | MS.gene069435:CDS |
| TTGTGCGGGACGCCAAAACA+GGG | 0.529894 | 2.2:-30597838 | MS.gene069435:CDS |
| TTAATCATGTTAAGACTGCC+GGG | 0.532564 | 2.2:-30598565 | MS.gene069435:CDS |
| TCATCTTCATCTGACAGTGT+TGG | 0.533513 | 2.2:-30599125 | MS.gene069435:CDS |
| TGACTCTCCAAAATTGGCTG+TGG | 0.535831 | 2.2:+30596815 | None:intergenic |
| CAGCACCAGAGACAGATGTC+AGG | 0.537306 | 2.2:+30596729 | None:intergenic |
| GTCCTTGGGTGATGTTGTGA+TGG | 0.537958 | 2.2:+30598948 | None:intergenic |
| ATGGGTTGTTACTCGGATGC+AGG | 0.539000 | 2.2:-30598489 | MS.gene069435:CDS |
| TCCTTGCTGCTGAGAAGCAG+TGG | 0.539829 | 2.2:-30598869 | MS.gene069435:CDS |
| GGAGTTAGTTCTGCTAACCT+TGG | 0.540076 | 2.2:-30599086 | MS.gene069435:CDS |
| AAGTTGTTCAAGTAGACACT+TGG | 0.551856 | 2.2:-30597901 | MS.gene069435:CDS |
| GCGTCGTGATTGGCTTGTGC+GGG | 0.553139 | 2.2:-30597852 | MS.gene069435:CDS |
| TTGGAAATTTAGCTGACAGC+GGG | 0.555268 | 2.2:-30596703 | MS.gene069435:CDS |
| GCTTGGATTTGAATCCTCCA+AGG | 0.561042 | 2.2:+30599069 | None:intergenic |
| ACTGATTGATGAATGTCCTT+GGG | 0.565331 | 2.2:+30598934 | None:intergenic |
| TGTTAATTCTGATCCAGTTG+TGG | 0.567572 | 2.2:-30597397 | MS.gene069435:CDS |
| AGTACAGGAGGGAATGTGGC+AGG | 0.577889 | 2.2:-30596769 | MS.gene069435:CDS |
| TGCGTCGTGATTGGCTTGTG+CGG | 0.578969 | 2.2:-30597853 | MS.gene069435:CDS |
| ATAATGTGAAGTACATTGGG+TGG | 0.582097 | 2.2:-30597181 | MS.gene069435:CDS |
| ACAAGCATATCAGGTCGTCT+AGG | 0.587704 | 2.2:+30598828 | None:intergenic |
| AAATCTTGACAAGAGCATCC+AGG | 0.590317 | 2.2:-30597814 | MS.gene069435:intron |
| ACATCTAGATCATTCCATCT+GGG | 0.591455 | 2.2:+30597218 | None:intergenic |
| AGTTCTACCCCTAACAATCT+CGG | 0.591640 | 2.2:+30596640 | None:intergenic |
| CCATGACTTTGGAGTACAGG+AGG | 0.592758 | 2.2:-30596781 | MS.gene069435:CDS |
| TCCACTGCTTCTCAGCAGCA+AGG | 0.592772 | 2.2:+30598868 | None:intergenic |
| CCTCCTGTACTCCAAAGTCA+TGG | 0.597089 | 2.2:+30596781 | None:intergenic |
| GGTTACAACTACGACGGTGA+AGG | 0.598952 | 2.2:-30598985 | MS.gene069435:CDS |
| TTAGGGGTAGAACTGGGTGG+AGG | 0.604438 | 2.2:-30596631 | MS.gene069435:CDS |
| GTTGGAAAATCCTCCAAACA+TGG | 0.605432 | 2.2:-30599107 | MS.gene069435:CDS |
| AGTTGTTCAAGTAGACACTT+GGG | 0.611713 | 2.2:-30597900 | MS.gene069435:CDS |
| TTGGAGTACAGGAGGGAATG+TGG | 0.613380 | 2.2:-30596773 | MS.gene069435:CDS |
| AGCACCAGAGACAGATGTCA+GGG | 0.622472 | 2.2:+30596730 | None:intergenic |
| CACCATCACAACATCACCCA+AGG | 0.625250 | 2.2:-30598950 | MS.gene069435:CDS |
| TTGTTAGGGGTAGAACTGGG+TGG | 0.629159 | 2.2:-30596634 | MS.gene069435:CDS |
| AGTAGACACTTGGGTTTCTG+CGG | 0.630478 | 2.2:-30597891 | MS.gene069435:CDS |
| CATGACTTTGGAGTACAGGA+GGG | 0.633124 | 2.2:-30596780 | MS.gene069435:CDS |
| GATGGTGCCGAGATTGTTAG+GGG | 0.638472 | 2.2:-30596647 | MS.gene069435:CDS |
| TGGTTGATCGTTATCCGACG+TGG | 0.644890 | 2.2:-30598463 | MS.gene069435:intron |
| GCAGCACCTTCCAAAATCAA+CGG | 0.646470 | 2.2:-30599014 | MS.gene069435:CDS |
| ATAGGGAAAATTGTTCAGGA+TGG | 0.648420 | 2.2:-30598792 | MS.gene069435:CDS |
| TCATGATGAATAAACTGACA+AGG | 0.652704 | 2.2:-30597470 | MS.gene069435:CDS |
| AAAATTCCGGAAGAGGTCAG+AGG | 0.654352 | 2.2:-30597438 | MS.gene069435:CDS |
| AGATTGTTAGGGGTAGAACT+GGG | 0.658213 | 2.2:-30596637 | MS.gene069435:CDS |
| CTCAGCAGCAAGGAAAATGG+TGG | 0.660147 | 2.2:+30598878 | None:intergenic |
| ATTGGAAATTTAGCTGACAG+CGG | 0.670615 | 2.2:-30596704 | MS.gene069435:CDS |
| GTACATTGGGTGGATTCTGG+AGG | 0.672791 | 2.2:-30597171 | MS.gene069435:intron |
| TGTGCGGGACGCCAAAACAG+GGG | 0.673030 | 2.2:-30597837 | MS.gene069435:CDS |
| TTCCAAAATCAACGGAACTG+CGG | 0.674773 | 2.2:-30599006 | MS.gene069435:CDS |
| AACTGCGGTTACAACTACGA+CGG | 0.716495 | 2.2:-30598991 | MS.gene069435:CDS |
| TAGATCGTACGAAATAGGTG+CGG | 0.735860 | 2.2:-30598742 | MS.gene069435:CDS |
| AAGGTTAAGACTAACCACGT+CGG | 0.758321 | 2.2:+30598449 | None:intergenic |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !!! | ATTATCAATTTTTGTAAAAT+AGG | + | chr2.2:30598112-30598131 | None:intergenic | 10.0% |
| !! | ACTAAACAAATAATCAAAAA+GGG | + | chr2.2:30598850-30598869 | None:intergenic | 15.0% |
| !!! | TAATTATTTGTTTTGATAAC+AGG | - | chr2.2:30597147-30597166 | MS.gene069435:intron | 15.0% |
| !!! | TACAAACTTTTTATAAAAGT+AGG | + | chr2.2:30597636-30597655 | None:intergenic | 15.0% |
| !! | ACAGGATATGAAATATAATA+TGG | - | chr2.2:30597589-30597608 | MS.gene069435:intron | 20.0% |
| !! | ATCTTTGATAAACAAATCAA+TGG | - | chr2.2:30598716-30598735 | MS.gene069435:CDS | 20.0% |
| !! | GACTAAACAAATAATCAAAA+AGG | + | chr2.2:30598851-30598870 | None:intergenic | 20.0% |
| !! | TGTTTAGTCAATAAACTTAT+CGG | - | chr2.2:30598862-30598881 | MS.gene069435:CDS | 20.0% |
| !! | TTAATAATGTGAAGTACATT+GGG | - | chr2.2:30598560-30598579 | MS.gene069435:CDS | 20.0% |
| !!! | AACATTTTCAACATATCTTA+TGG | + | chr2.2:30597998-30598017 | None:intergenic | 20.0% |
| !!! | TTATGTAACAAATTTGTTGT+GGG | - | chr2.2:30597101-30597120 | MS.gene069435:intron | 20.0% |
| !!! | TTTATGTAACAAATTTGTTG+TGG | - | chr2.2:30597100-30597119 | MS.gene069435:intron | 20.0% |
| ! | AAGATTAGGTTAAATTCTTC+TGG | - | chr2.2:30597489-30597508 | MS.gene069435:intron | 25.0% |
| ! | AGAACATCAAAATTGTTGAT+AGG | + | chr2.2:30599145-30599164 | None:intergenic | 25.0% |
| ! | AGATTAGGTTAAATTCTTCT+GGG | - | chr2.2:30597490-30597509 | MS.gene069435:intron | 25.0% |
| ! | ATATCAACAGTAGAATGAAT+TGG | - | chr2.2:30598803-30598822 | MS.gene069435:CDS | 25.0% |
| ! | ATTTAACCTAATCTTCAATC+TGG | + | chr2.2:30597484-30597503 | None:intergenic | 25.0% |
| ! | GCGTATTTAACAAATCAAAA+AGG | + | chr2.2:30597317-30597336 | None:intergenic | 25.0% |
| ! | GTTAATAATGTGAAGTACAT+TGG | - | chr2.2:30598559-30598578 | MS.gene069435:CDS | 25.0% |
| ! | GTTTAGTCAATAAACTTATC+GGG | - | chr2.2:30598863-30598882 | MS.gene069435:CDS | 25.0% |
| !! | AAGGAAACTATCTAAAATTC+CGG | - | chr2.2:30598293-30598312 | MS.gene069435:intron | 25.0% |
| !! | ACTAACTAAACTTGATGATT+CGG | - | chr2.2:30598386-30598405 | MS.gene069435:intron | 25.0% |
| !! | GCTTTATACATGTGAATTTT+GGG | - | chr2.2:30597543-30597562 | MS.gene069435:intron | 25.0% |
| !!! | AGCTTTATACATGTGAATTT+TGG | - | chr2.2:30597542-30597561 | MS.gene069435:intron | 25.0% |
| !!! | TCAAAATTGTTGATAGGTTT+TGG | + | chr2.2:30599139-30599158 | None:intergenic | 25.0% |
| AACAATTTGCAAAGTACAGA+CGG | + | chr2.2:30597727-30597746 | None:intergenic | 30.0% | |
| GCTTGAAAGATTAAAAACAG+TGG | + | chr2.2:30598054-30598073 | None:intergenic | 30.0% | |
| GTGAATCTATATTTGCTTCA+GGG | - | chr2.2:30597817-30597836 | MS.gene069435:CDS | 30.0% | |
| GTGCAAAAAGAACTTGATAT+GGG | - | chr2.2:30597237-30597256 | MS.gene069435:intron | 30.0% | |
| TCATGATGAATAAACTGACA+AGG | - | chr2.2:30598274-30598293 | MS.gene069435:intron | 30.0% | |
| TGAATCTATATTTGCTTCAG+GGG | - | chr2.2:30597818-30597837 | MS.gene069435:CDS | 30.0% | |
| TGTGAATCTATATTTGCTTC+AGG | - | chr2.2:30597816-30597835 | MS.gene069435:CDS | 30.0% | |
| TGTGCAAAAAGAACTTGATA+TGG | - | chr2.2:30597236-30597255 | MS.gene069435:intron | 30.0% | |
| ! | AAGTTCTTTTTGCACATTTC+TGG | + | chr2.2:30597232-30597251 | None:intergenic | 30.0% |
| ! | ACAATTTTCCCTATACCAAA+AGG | + | chr2.2:30596946-30596965 | None:intergenic | 30.0% |
| ! | ACGATCTAATCGAAAAGTTT+TGG | + | chr2.2:30596990-30597009 | None:intergenic | 30.0% |
| ! | CAATTTTCCCTATACCAAAA+GGG | + | chr2.2:30596945-30596964 | None:intergenic | 30.0% |
| ! | CTTTGCAATTTCTGATTTGT+TGG | - | chr2.2:30598221-30598240 | MS.gene069435:intron | 30.0% |
| !! | TCAGTTTGCTTTTGTCAAAT+TGG | - | chr2.2:30598139-30598158 | MS.gene069435:intron | 30.0% |
| !! | TGCTATCTCTATTTCTATCT+TGG | - | chr2.2:30597354-30597373 | MS.gene069435:CDS | 30.0% |
| !!! | TTCACTTTTTACATGTAGCT+AGG | + | chr2.2:30597674-30597693 | None:intergenic | 30.0% |
| AACATCTAGATCATTCCATC+TGG | + | chr2.2:30598530-30598549 | None:intergenic | 35.0% | |
| AACTGATTGATGAATGTCCT+TGG | + | chr2.2:30596814-30596833 | None:intergenic | 35.0% | |
| AAGTTGTTCAAGTAGACACT+TGG | - | chr2.2:30597843-30597862 | MS.gene069435:CDS | 35.0% | |
| ACATCTAGATCATTCCATCT+GGG | + | chr2.2:30598529-30598548 | None:intergenic | 35.0% | |
| ACTGATTGATGAATGTCCTT+GGG | + | chr2.2:30596813-30596832 | None:intergenic | 35.0% | |
| AGTTGTTCAAGTAGACACTT+GGG | - | chr2.2:30597844-30597863 | MS.gene069435:CDS | 35.0% | |
| ATAATGTGAAGTACATTGGG+TGG | - | chr2.2:30598563-30598582 | MS.gene069435:CDS | 35.0% | |
| ATAGATTCACACTCAACTTC+TGG | + | chr2.2:30597807-30597826 | None:intergenic | 35.0% | |
| ATAGCACCAGATTGAAGATT+AGG | - | chr2.2:30597475-30597494 | MS.gene069435:CDS | 35.0% | |
| ATAGGGAAAATTGTTCAGGA+TGG | - | chr2.2:30596952-30596971 | MS.gene069435:intron | 35.0% | |
| ATTGGAAATTTAGCTGACAG+CGG | - | chr2.2:30599040-30599059 | MS.gene069435:CDS | 35.0% | |
| CTTAATCATGTTAAGACTGC+CGG | - | chr2.2:30597178-30597197 | MS.gene069435:CDS | 35.0% | |
| GACGTTAATGAATCATTTGC+AGG | - | chr2.2:30597044-30597063 | MS.gene069435:intron | 35.0% | |
| TAGTAGAGATCGTCTGAATA+AGG | - | chr2.2:30598680-30598699 | MS.gene069435:intron | 35.0% | |
| TCGATTAGATCGTACGAAAT+AGG | - | chr2.2:30596997-30597016 | MS.gene069435:intron | 35.0% | |
| TGGTATAGGGAAAATTGTTC+AGG | - | chr2.2:30596948-30596967 | MS.gene069435:intron | 35.0% | |
| TGTTAATTCTGATCCAGTTG+TGG | - | chr2.2:30598347-30598366 | MS.gene069435:intron | 35.0% | |
| TTAATCATGTTAAGACTGCC+GGG | - | chr2.2:30597179-30597198 | MS.gene069435:CDS | 35.0% | |
| TTGGGATTTCCTTTGTCTTT+AGG | - | chr2.2:30597561-30597580 | MS.gene069435:intron | 35.0% | |
| TTTGATGTTCGACAGTGTTT+GGG | - | chr2.2:30598251-30598270 | MS.gene069435:intron | 35.0% | |
| ! | AAATCCAAGCAAAGCTCTAA+TGG | - | chr2.2:30596688-30596707 | MS.gene069435:CDS | 35.0% |
| ! | ACTATCTAAAATTCCGGAAG+AGG | - | chr2.2:30598299-30598318 | MS.gene069435:intron | 35.0% |
| ! | ACTTGATATGGGTTGTTACT+CGG | - | chr2.2:30597248-30597267 | MS.gene069435:intron | 35.0% |
| ! | ATCGCTAAACTTTTTGTCTC+AGG | - | chr2.2:30597446-30597465 | MS.gene069435:CDS | 35.0% |
| ! | GAATGAATTGGTCACTTTAG+AGG | - | chr2.2:30598815-30598834 | MS.gene069435:CDS | 35.0% |
| ! | GATGAAGATGATGATGTAAC+AGG | + | chr2.2:30596610-30596629 | None:intergenic | 35.0% |
| ! | TTGTTGACCCTTTTGGTATA+GGG | - | chr2.2:30596935-30596954 | MS.gene069435:intron | 35.0% |
| ! | TTTTGATGTTCGACAGTGTT+TGG | - | chr2.2:30598250-30598269 | MS.gene069435:intron | 35.0% |
| !! | GTTCTGAATTGACTTTTACC+TGG | + | chr2.2:30597951-30597970 | None:intergenic | 35.0% |
| AAAATGGTATGCGTCGTGAT+TGG | - | chr2.2:30597882-30597901 | MS.gene069435:CDS | 40.0% | |
| AAAGGGTCAACAAGCATATC+AGG | + | chr2.2:30596928-30596947 | None:intergenic | 40.0% | |
| AAGGTTAAGACTAACCACGT+CGG | + | chr2.2:30597298-30597317 | None:intergenic | 40.0% | |
| AGAACTAACTCCATGTTTGG+AGG | + | chr2.2:30596650-30596669 | None:intergenic | 40.0% | |
| AGATTGTTAGGGGTAGAACT+GGG | - | chr2.2:30599107-30599126 | MS.gene069435:CDS | 40.0% | |
| AGCAGAACTAACTCCATGTT+TGG | + | chr2.2:30596653-30596672 | None:intergenic | 40.0% | |
| AGCTCATGACTCTCCAAAAT+TGG | + | chr2.2:30598938-30598957 | None:intergenic | 40.0% | |
| AGTGAAGAAAGGAGCAAGAA+AGG | + | chr2.2:30597973-30597992 | None:intergenic | 40.0% | |
| AGTTCTACCCCTAACAATCT+CGG | + | chr2.2:30599107-30599126 | None:intergenic | 40.0% | |
| ATCTTATGGCCAGTGAAGAA+AGG | + | chr2.2:30597984-30598003 | None:intergenic | 40.0% | |
| CAATCAAACCACAATCCCTT+TGG | + | chr2.2:30598897-30598916 | None:intergenic | 40.0% | |
| CTGTAACAGCCTAAAGACAA+AGG | + | chr2.2:30597573-30597592 | None:intergenic | 40.0% | |
| CTTTGTCTTTAGGCTGTTAC+AGG | - | chr2.2:30597571-30597590 | MS.gene069435:intron | 40.0% | |
| GTTGGAAAATCCTCCAAACA+TGG | - | chr2.2:30596637-30596656 | MS.gene069435:CDS | 40.0% | |
| TAAGCCATTAGAGCTTTGCT+TGG | + | chr2.2:30596695-30596714 | None:intergenic | 40.0% | |
| TAGAGATAGCAGCTGAACAA+AGG | + | chr2.2:30597345-30597364 | None:intergenic | 40.0% | |
| TAGATCGTACGAAATAGGTG+CGG | - | chr2.2:30597002-30597021 | MS.gene069435:intron | 40.0% | |
| TCATCAATCAGTTGCCTGAT+TGG | - | chr2.2:30596821-30596840 | MS.gene069435:CDS | 40.0% | |
| TCATCTTCATCTGACAGTGT+TGG | - | chr2.2:30596619-30596638 | MS.gene069435:CDS | 40.0% | |
| TTCCAAAATCAACGGAACTG+CGG | - | chr2.2:30596738-30596757 | MS.gene069435:CDS | 40.0% | |
| TTGGAAATTTAGCTGACAGC+GGG | - | chr2.2:30599041-30599060 | MS.gene069435:CDS | 40.0% | |
| TTTCTTGCTCCTTTCTTCAC+TGG | - | chr2.2:30597972-30597991 | MS.gene069435:intron | 40.0% | |
| ! | ATCTCTATTTTCAGCCCAGA+TGG | - | chr2.2:30598512-30598531 | MS.gene069435:CDS | 40.0% |
| ! | CTTGTTGACCCTTTTGGTAT+AGG | - | chr2.2:30596934-30596953 | MS.gene069435:intron | 40.0% |
| ! | TGTCAAGATTTCCCCTGTTT+TGG | + | chr2.2:30597921-30597940 | None:intergenic | 40.0% |
| !! | AAATCTTGACAAGAGCATCC+AGG | - | chr2.2:30597930-30597949 | MS.gene069435:intron | 40.0% |
| !! | ATTCCATGACTTTGGAGTAC+AGG | - | chr2.2:30598960-30598979 | MS.gene069435:CDS | 40.0% |
| !! | GATATGCTTGTTGACCCTTT+TGG | - | chr2.2:30596928-30596947 | MS.gene069435:intron | 40.0% |
| AAAAACAGTGGCCAGTCACA+AGG | + | chr2.2:30598042-30598061 | None:intergenic | 45.0% | |
| AAAATTCCGGAAGAGGTCAG+AGG | - | chr2.2:30598306-30598325 | MS.gene069435:intron | 45.0% | |
| AACTGCGGTTACAACTACGA+CGG | - | chr2.2:30596753-30596772 | MS.gene069435:CDS | 45.0% | |
| ACAAGCATATCAGGTCGTCT+AGG | + | chr2.2:30596919-30596938 | None:intergenic | 45.0% | |
| AGCAGTGGATGATGCTTGAT+TGG | - | chr2.2:30596890-30596909 | MS.gene069435:intron | 45.0% | |
| AGTAGACACTTGGGTTTCTG+CGG | - | chr2.2:30597853-30597872 | MS.gene069435:CDS | 45.0% | |
| CCACAATCCCTTTGGTTAAG+CGG | + | chr2.2:30598889-30598908 | None:intergenic | 45.0% | |
| CTTCTCAGCAGCAAGGAAAA+TGG | + | chr2.2:30596872-30596891 | None:intergenic | 45.0% | |
| GAGATTGTTAGGGGTAGAAC+TGG | - | chr2.2:30599106-30599125 | MS.gene069435:CDS | 45.0% | |
| GCAGCACCTTCCAAAATCAA+CGG | - | chr2.2:30596730-30596749 | MS.gene069435:CDS | 45.0% | |
| GCTTGGATTTGAATCCTCCA+AGG | + | chr2.2:30596678-30596697 | None:intergenic | 45.0% | |
| GTTTCTGCGGCAGGAAAAAA+TGG | - | chr2.2:30597866-30597885 | MS.gene069435:CDS | 45.0% | |
| TCGGCTGAATATATTCGCAC+TGG | - | chr2.2:30598405-30598424 | MS.gene069435:intron | 45.0% | |
| TGACTCTCCAAAATTGGCTG+TGG | + | chr2.2:30598932-30598951 | None:intergenic | 45.0% | |
| TGAGCTGCATTCCATGACTT+TGG | - | chr2.2:30598952-30598971 | MS.gene069435:CDS | 45.0% | |
| ! | ATGATGGTGCCGAGATTGTT+AGG | - | chr2.2:30599095-30599114 | MS.gene069435:CDS | 45.0% |
| ! | GAAGTACATTGGGTGGATTC+TGG | - | chr2.2:30598570-30598589 | MS.gene069435:CDS | 45.0% |
| ! | TGATGGTGCCGAGATTGTTA+GGG | - | chr2.2:30599096-30599115 | MS.gene069435:CDS | 45.0% |
| !! | CATGACTTTGGAGTACAGGA+GGG | - | chr2.2:30598964-30598983 | MS.gene069435:CDS | 45.0% |
| !! | GGAGTTAGTTCTGCTAACCT+TGG | - | chr2.2:30596658-30596677 | MS.gene069435:CDS | 45.0% |
| !! | GTTAGTTCTGCTAACCTTGG+AGG | - | chr2.2:30596661-30596680 | MS.gene069435:CDS | 45.0% |
| !!! | AACCGCAGTTCCGTTGATTT+TGG | + | chr2.2:30596743-30596762 | None:intergenic | 45.0% |
| !!! | GCAGTTCCGTTGATTTTGGA+AGG | + | chr2.2:30596739-30596758 | None:intergenic | 45.0% |
| AAAGCCATCACCAAGAAGCC+CGG | + | chr2.2:30597200-30597219 | None:intergenic | 50.0% | |
| AACAAGAACGCGAGAAAGCG+AGG | + | chr2.2:30598636-30598655 | None:intergenic | 50.0% | |
| AGCACCAGAGACAGATGTCA+GGG | + | chr2.2:30599017-30599036 | None:intergenic | 50.0% | |
| ATCTCTCCTCTGACCTCTTC+CGG | + | chr2.2:30598315-30598334 | None:intergenic | 50.0% | |
| CACCATCACAACATCACCCA+AGG | - | chr2.2:30596794-30596813 | MS.gene069435:CDS | 50.0% | |
| CCGCTTAACCAAAGGGATTG+TGG | - | chr2.2:30598886-30598905 | MS.gene069435:CDS | 50.0% | |
| CCTCCTGTACTCCAAAGTCA+TGG | + | chr2.2:30598966-30598985 | None:intergenic | 50.0% | |
| CTCAGCAGCAAGGAAAATGG+TGG | + | chr2.2:30596869-30596888 | None:intergenic | 50.0% | |
| CTGTTATCCTCGTCCACAAC+TGG | + | chr2.2:30598363-30598382 | None:intergenic | 50.0% | |
| GAATGTGCATGCCTTGTGAC+TGG | - | chr2.2:30598028-30598047 | MS.gene069435:intron | 50.0% | |
| GGTTACAACTACGACGGTGA+AGG | - | chr2.2:30596759-30596778 | MS.gene069435:CDS | 50.0% | |
| GTCCTTGGGTGATGTTGTGA+TGG | + | chr2.2:30596799-30596818 | None:intergenic | 50.0% | |
| TATCGGGCCGCTTAACCAAA+GGG | - | chr2.2:30598879-30598898 | MS.gene069435:CDS | 50.0% | |
| TGGTTGATCGTTATCCGACG+TGG | - | chr2.2:30597281-30597300 | MS.gene069435:intron | 50.0% | |
| TGTTACTCGGATGCAGGTTG+TGG | - | chr2.2:30597261-30597280 | MS.gene069435:intron | 50.0% | |
| TTATCGGGCCGCTTAACCAA+AGG | - | chr2.2:30598878-30598897 | MS.gene069435:CDS | 50.0% | |
| TTCTGATCCAGTTGTGGACG+AGG | - | chr2.2:30598353-30598372 | MS.gene069435:intron | 50.0% | |
| TTGGAGTACAGGAGGGAATG+TGG | - | chr2.2:30598971-30598990 | MS.gene069435:CDS | 50.0% | |
| TTGTTAGGGGTAGAACTGGG+TGG | - | chr2.2:30599110-30599129 | MS.gene069435:CDS | 50.0% | |
| ! | ATGGGTTGTTACTCGGATGC+AGG | - | chr2.2:30597255-30597274 | MS.gene069435:intron | 50.0% |
| ! | CACTTGCTTCGACTCGATGA+TGG | - | chr2.2:30599079-30599098 | MS.gene069435:CDS | 50.0% |
| ! | GAGTGCTCCACAGCCAATTT+TGG | - | chr2.2:30598922-30598941 | MS.gene069435:CDS | 50.0% |
| ! | GATGGTGCCGAGATTGTTAG+GGG | - | chr2.2:30599097-30599116 | MS.gene069435:CDS | 50.0% |
| ! | GCAAGAAGCATGCTCCAATC+AGG | + | chr2.2:30596838-30596857 | None:intergenic | 50.0% |
| ! | GTACATTGGGTGGATTCTGG+AGG | - | chr2.2:30598573-30598592 | MS.gene069435:CDS | 50.0% |
| !! | CCATGACTTTGGAGTACAGG+AGG | - | chr2.2:30598963-30598982 | MS.gene069435:CDS | 50.0% |
| !! | TCTGTCTCTGGTGCTGACAT+TGG | - | chr2.2:30599022-30599041 | MS.gene069435:CDS | 50.0% |
| AAGAACGCGAGAAAGCGAGG+AGG | + | chr2.2:30598633-30598652 | None:intergenic | 55.0% | |
| AGAACGCGAGAAAGCGAGGA+GGG | + | chr2.2:30598632-30598651 | None:intergenic | 55.0% | |
| AGTACAGGAGGGAATGTGGC+AGG | - | chr2.2:30598975-30598994 | MS.gene069435:CDS | 55.0% | |
| CAGCACCAGAGACAGATGTC+AGG | + | chr2.2:30599018-30599037 | None:intergenic | 55.0% | |
| CAGTCCCTGACATCTGTCTC+TGG | - | chr2.2:30599010-30599029 | MS.gene069435:CDS | 55.0% | |
| GTTAAGACTGCCGGGCTTCT+TGG | - | chr2.2:30597187-30597206 | MS.gene069435:CDS | 55.0% | |
| TCCACTGCTTCTCAGCAGCA+AGG | + | chr2.2:30596879-30596898 | None:intergenic | 55.0% | |
| TCCTTGCTGCTGAGAAGCAG+TGG | - | chr2.2:30596875-30596894 | MS.gene069435:intron | 55.0% | |
| TTAGGGGTAGAACTGGGTGG+AGG | - | chr2.2:30599113-30599132 | MS.gene069435:CDS | 55.0% | |
| TTGTGCGGGACGCCAAAACA+GGG | - | chr2.2:30597906-30597925 | MS.gene069435:CDS | 55.0% | |
| !! | GGGCTTCTTGGTGATGGCTT+TGG | - | chr2.2:30597199-30597218 | MS.gene069435:CDS | 55.0% |
| !! | TGCGTCGTGATTGGCTTGTG+CGG | - | chr2.2:30597891-30597910 | MS.gene069435:CDS | 55.0% |
| ACTGCCGGGCTTCTTGGTGA+TGG | - | chr2.2:30597193-30597212 | MS.gene069435:CDS | 60.0% | |
| CTTGTGCGGGACGCCAAAAC+AGG | - | chr2.2:30597905-30597924 | MS.gene069435:CDS | 60.0% | |
| GAACGCGAGAAAGCGAGGAG+GGG | + | chr2.2:30598631-30598650 | None:intergenic | 60.0% | |
| GACACTTGGGTTTCTGCGGC+AGG | - | chr2.2:30597857-30597876 | MS.gene069435:CDS | 60.0% | |
| TGTGCGGGACGCCAAAACAG+GGG | - | chr2.2:30597907-30597926 | MS.gene069435:CDS | 60.0% | |
| !! | GCGTCGTGATTGGCTTGTGC+GGG | - | chr2.2:30597892-30597911 | MS.gene069435:CDS | 60.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr2.2 | gene | 30596574 | 30599192 | 30596574 | ID=MS.gene069435 |
| chr2.2 | mRNA | 30596574 | 30599192 | 30596574 | ID=MS.gene069435.t1;Parent=MS.gene069435 |
| chr2.2 | exon | 30598701 | 30599192 | 30598701 | ID=MS.gene069435.t1.exon1;Parent=MS.gene069435.t1 |
| chr2.2 | CDS | 30598701 | 30599192 | 30598701 | ID=cds.MS.gene069435.t1;Parent=MS.gene069435.t1 |
| chr2.2 | exon | 30598464 | 30598597 | 30598464 | ID=MS.gene069435.t1.exon2;Parent=MS.gene069435.t1 |
| chr2.2 | CDS | 30598464 | 30598597 | 30598464 | ID=cds.MS.gene069435.t1;Parent=MS.gene069435.t1 |
| chr2.2 | exon | 30597815 | 30597928 | 30597815 | ID=MS.gene069435.t1.exon3;Parent=MS.gene069435.t1 |
| chr2.2 | CDS | 30597815 | 30597928 | 30597815 | ID=cds.MS.gene069435.t1;Parent=MS.gene069435.t1 |
| chr2.2 | exon | 30597332 | 30597500 | 30597332 | ID=MS.gene069435.t1.exon4;Parent=MS.gene069435.t1 |
| chr2.2 | CDS | 30597332 | 30597500 | 30597332 | ID=cds.MS.gene069435.t1;Parent=MS.gene069435.t1 |
| chr2.2 | exon | 30597172 | 30597240 | 30597172 | ID=MS.gene069435.t1.exon5;Parent=MS.gene069435.t1 |
| chr2.2 | CDS | 30597172 | 30597240 | 30597172 | ID=cds.MS.gene069435.t1;Parent=MS.gene069435.t1 |
| chr2.2 | exon | 30596574 | 30596843 | 30596574 | ID=MS.gene069435.t1.exon6;Parent=MS.gene069435.t1 |
| chr2.2 | CDS | 30596574 | 30596843 | 30596574 | ID=cds.MS.gene069435.t1;Parent=MS.gene069435.t1 |
| Gene Sequence |
| Protein sequence |
