Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene074393.t1 | XP_013461056.1 | 100 | 90 | 0 | 0 | 1 | 90 | 1 | 90 | 5.70E-44 | 186.4 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene074393.t1 | B7FH72 | 100.0 | 90 | 0 | 0 | 1 | 90 | 1 | 90 | 4.1e-44 | 186.4 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| MS.gene049149 | MS.gene074393 | -0.826296 | 2.93E-54 | -1.69E-46 |
| MS.gene049150 | MS.gene074393 | -0.893694 | 4.95E-75 | -1.69E-46 |
| MS.gene049151 | MS.gene074393 | -0.858954 | 5.78E-63 | -1.69E-46 |
| MS.gene049153 | MS.gene074393 | -0.899088 | 2.80E-77 | -1.69E-46 |
| MS.gene049260 | MS.gene074393 | -0.845918 | 3.01E-59 | -1.69E-46 |
| MS.gene049297 | MS.gene074393 | -0.804003 | 2.66E-49 | -1.69E-46 |
| MS.gene049378 | MS.gene074393 | -0.83903 | 2.02E-57 | -1.69E-46 |
| MS.gene049435 | MS.gene074393 | -0.81331 | 2.73E-51 | -1.69E-46 |
| MS.gene049443 | MS.gene074393 | -0.82438 | 8.33E-54 | -1.69E-46 |
| MS.gene049758 | MS.gene074393 | -0.804763 | 1.85E-49 | -1.69E-46 |
| MS.gene049910 | MS.gene074393 | -0.815475 | 9.07E-52 | -1.69E-46 |
| MS.gene049993 | MS.gene074393 | -0.816583 | 5.13E-52 | -1.69E-46 |
| MS.gene050060 | MS.gene074393 | -0.80107 | 1.07E-48 | -1.69E-46 |
| MS.gene050105 | MS.gene074393 | -0.801515 | 8.68E-49 | -1.69E-46 |
| MS.gene050128 | MS.gene074393 | -0.812391 | 4.34E-51 | -1.69E-46 |
| MS.gene050168 | MS.gene074393 | -0.81845 | 1.95E-52 | -1.69E-46 |
| MS.gene050226 | MS.gene074393 | -0.857344 | 1.74E-62 | -1.69E-46 |
| MS.gene050227 | MS.gene074393 | -0.852741 | 3.78E-61 | -1.69E-46 |
| MS.gene050228 | MS.gene074393 | -0.854666 | 1.06E-61 | -1.69E-46 |
| MS.gene050398 | MS.gene074393 | -0.801294 | 9.64E-49 | -1.69E-46 |
| MS.gene050426 | MS.gene074393 | 0.832093 | 1.15E-55 | -1.69E-46 |
| MS.gene050442 | MS.gene074393 | -0.824487 | 7.86E-54 | -1.69E-46 |
| MS.gene050605 | MS.gene074393 | -0.850193 | 1.99E-60 | -1.69E-46 |
| MS.gene050623 | MS.gene074393 | 0.893587 | 5.47E-75 | -1.69E-46 |
| MS.gene050642 | MS.gene074393 | -0.884175 | 2.40E-71 | -1.69E-46 |
| MS.gene050680 | MS.gene074393 | -0.840968 | 6.32E-58 | -1.69E-46 |
| MS.gene050750 | MS.gene074393 | -0.82467 | 7.12E-54 | -1.69E-46 |
| MS.gene050762 | MS.gene074393 | -0.805652 | 1.20E-49 | -1.69E-46 |
| MS.gene050763 | MS.gene074393 | -0.808864 | 2.51E-50 | -1.69E-46 |
| MS.gene050953 | MS.gene074393 | -0.821085 | 4.87E-53 | -1.69E-46 |
| MS.gene051368 | MS.gene074393 | -0.808411 | 3.14E-50 | -1.69E-46 |
| MS.gene051370 | MS.gene074393 | -0.811267 | 7.62E-51 | -1.69E-46 |
| MS.gene051373 | MS.gene074393 | -0.834226 | 3.39E-56 | -1.69E-46 |
| MS.gene051535 | MS.gene074393 | -0.826328 | 2.88E-54 | -1.69E-46 |
| MS.gene051568 | MS.gene074393 | -0.802654 | 5.06E-49 | -1.69E-46 |
| MS.gene051860 | MS.gene074393 | -0.88979 | 1.77E-73 | -1.69E-46 |
| MS.gene051983 | MS.gene074393 | -0.909076 | 8.49E-82 | -1.69E-46 |
| MS.gene052011 | MS.gene074393 | 0.831958 | 1.24E-55 | -1.69E-46 |
| MS.gene052077 | MS.gene074393 | -0.863266 | 2.81E-64 | -1.69E-46 |
| MS.gene052176 | MS.gene074393 | -0.800802 | 1.21E-48 | -1.69E-46 |
| MS.gene052188 | MS.gene074393 | -0.808691 | 2.73E-50 | -1.69E-46 |
| MS.gene052253 | MS.gene074393 | -0.804849 | 1.77E-49 | -1.69E-46 |
| MS.gene052255 | MS.gene074393 | -0.821589 | 3.73E-53 | -1.69E-46 |
| MS.gene052333 | MS.gene074393 | -0.822086 | 2.86E-53 | -1.69E-46 |
| MS.gene052340 | MS.gene074393 | -0.83383 | 4.26E-56 | -1.69E-46 |
| MS.gene052389 | MS.gene074393 | -0.805486 | 1.30E-49 | -1.69E-46 |
| MS.gene052426 | MS.gene074393 | -0.838187 | 3.34E-57 | -1.69E-46 |
| MS.gene053166 | MS.gene074393 | -0.819581 | 1.08E-52 | -1.69E-46 |
| MS.gene05316 | MS.gene074393 | -0.851592 | 8.03E-61 | -1.69E-46 |
| MS.gene053176 | MS.gene074393 | -0.805864 | 1.09E-49 | -1.69E-46 |
| MS.gene053494 | MS.gene074393 | -0.874901 | 4.70E-68 | -1.69E-46 |
| MS.gene053557 | MS.gene074393 | -0.807174 | 5.75E-50 | -1.69E-46 |
| MS.gene053584 | MS.gene074393 | -0.836848 | 7.36E-57 | -1.69E-46 |
| MS.gene053836 | MS.gene074393 | -0.845239 | 4.60E-59 | -1.69E-46 |
| MS.gene054183 | MS.gene074393 | -0.870564 | 1.33E-66 | -1.69E-46 |
| MS.gene054184 | MS.gene074393 | -0.800947 | 1.13E-48 | -1.69E-46 |
| MS.gene054349 | MS.gene074393 | -0.856773 | 2.56E-62 | -1.69E-46 |
| MS.gene054379 | MS.gene074393 | -0.824224 | 9.06E-54 | -1.69E-46 |
| MS.gene054405 | MS.gene074393 | -0.817588 | 3.05E-52 | -1.69E-46 |
| MS.gene054556 | MS.gene074393 | -0.838103 | 3.51E-57 | -1.69E-46 |
| MS.gene054559 | MS.gene074393 | -0.807762 | 4.31E-50 | -1.69E-46 |
| MS.gene054713 | MS.gene074393 | -0.804254 | 2.36E-49 | -1.69E-46 |
| MS.gene054719 | MS.gene074393 | -0.806869 | 6.67E-50 | -1.69E-46 |
| MS.gene054930 | MS.gene074393 | -0.835866 | 1.31E-56 | -1.69E-46 |
| MS.gene054942 | MS.gene074393 | -0.813395 | 2.62E-51 | -1.69E-46 |
| MS.gene05510 | MS.gene074393 | -0.848062 | 7.79E-60 | -1.69E-46 |
| MS.gene055356 | MS.gene074393 | -0.82951 | 4.94E-55 | -1.69E-46 |
| MS.gene055358 | MS.gene074393 | -0.824215 | 9.11E-54 | -1.69E-46 |
| MS.gene055367 | MS.gene074393 | -0.822849 | 1.90E-53 | -1.69E-46 |
| MS.gene05553 | MS.gene074393 | -0.859135 | 5.10E-63 | -1.69E-46 |
| MS.gene055604 | MS.gene074393 | -0.819146 | 1.35E-52 | -1.69E-46 |
| MS.gene055701 | MS.gene074393 | -0.896197 | 4.65E-76 | -1.69E-46 |
| MS.gene05595 | MS.gene074393 | -0.832187 | 1.09E-55 | -1.69E-46 |
| MS.gene056087 | MS.gene074393 | -0.80084 | 1.19E-48 | -1.69E-46 |
| MS.gene056447 | MS.gene074393 | -0.853748 | 1.95E-61 | -1.69E-46 |
| MS.gene056506 | MS.gene074393 | -0.840642 | 7.69E-58 | -1.69E-46 |
| MS.gene056723 | MS.gene074393 | -0.837056 | 6.51E-57 | -1.69E-46 |
| MS.gene056875 | MS.gene074393 | -0.80423 | 2.39E-49 | -1.69E-46 |
| MS.gene056899 | MS.gene074393 | 0.843846 | 1.09E-58 | -1.69E-46 |
| MS.gene056979 | MS.gene074393 | -0.907628 | 4.13E-81 | -1.69E-46 |
| MS.gene057156 | MS.gene074393 | 0.800523 | 1.38E-48 | -1.69E-46 |
| MS.gene057200 | MS.gene074393 | -0.810756 | 9.84E-51 | -1.69E-46 |
| MS.gene057396 | MS.gene074393 | -0.825503 | 4.52E-54 | -1.69E-46 |
| MS.gene057448 | MS.gene074393 | -0.802866 | 4.58E-49 | -1.69E-46 |
| MS.gene057469 | MS.gene074393 | -0.82783 | 1.26E-54 | -1.69E-46 |
| MS.gene05761 | MS.gene074393 | -0.812745 | 3.63E-51 | -1.69E-46 |
| MS.gene057639 | MS.gene074393 | -0.81165 | 6.30E-51 | -1.69E-46 |
| MS.gene057690 | MS.gene074393 | -0.814201 | 1.74E-51 | -1.69E-46 |
| MS.gene057750 | MS.gene074393 | -0.816075 | 6.66E-52 | -1.69E-46 |
| MS.gene057863 | MS.gene074393 | -0.800295 | 1.54E-48 | -1.69E-46 |
| MS.gene058002 | MS.gene074393 | -0.81895 | 1.50E-52 | -1.69E-46 |
| MS.gene05811 | MS.gene074393 | -0.820369 | 7.11E-53 | -1.69E-46 |
| MS.gene058139 | MS.gene074393 | -0.80609 | 9.74E-50 | -1.69E-46 |
| MS.gene058142 | MS.gene074393 | -0.865008 | 8.06E-65 | -1.69E-46 |
| MS.gene058146 | MS.gene074393 | -0.830619 | 2.65E-55 | -1.69E-46 |
| MS.gene058399 | MS.gene074393 | -0.808328 | 3.27E-50 | -1.69E-46 |
| MS.gene058435 | MS.gene074393 | -0.848796 | 4.88E-60 | -1.69E-46 |
| MS.gene058595 | MS.gene074393 | -0.810316 | 1.22E-50 | -1.69E-46 |
| MS.gene058710 | MS.gene074393 | -0.820917 | 5.32E-53 | -1.69E-46 |
| MS.gene058949 | MS.gene074393 | -0.809867 | 1.53E-50 | -1.69E-46 |
| MS.gene05907 | MS.gene074393 | -0.814264 | 1.68E-51 | -1.69E-46 |
| MS.gene059128 | MS.gene074393 | -0.829898 | 3.98E-55 | -1.69E-46 |
| MS.gene059160 | MS.gene074393 | -0.80244 | 5.60E-49 | -1.69E-46 |
| MS.gene059161 | MS.gene074393 | -0.847151 | 1.39E-59 | -1.69E-46 |
| MS.gene059162 | MS.gene074393 | -0.815158 | 1.07E-51 | -1.69E-46 |
| MS.gene059247 | MS.gene074393 | -0.862286 | 5.64E-64 | -1.69E-46 |
| MS.gene059285 | MS.gene074393 | -0.844245 | 8.52E-59 | -1.69E-46 |
| MS.gene059420 | MS.gene074393 | -0.835966 | 1.23E-56 | -1.69E-46 |
| MS.gene059609 | MS.gene074393 | -0.906295 | 1.73E-80 | -1.69E-46 |
| MS.gene05984 | MS.gene074393 | -0.86254 | 4.71E-64 | -1.69E-46 |
| MS.gene059894 | MS.gene074393 | -0.800303 | 1.54E-48 | -1.69E-46 |
| MS.gene060137 | MS.gene074393 | 0.827798 | 1.28E-54 | -1.69E-46 |
| MS.gene060495 | MS.gene074393 | -0.806087 | 9.75E-50 | -1.69E-46 |
| MS.gene060683 | MS.gene074393 | -0.848011 | 8.04E-60 | -1.69E-46 |
| MS.gene060685 | MS.gene074393 | -0.840894 | 6.60E-58 | -1.69E-46 |
| MS.gene060802 | MS.gene074393 | -0.873158 | 1.83E-67 | -1.69E-46 |
| MS.gene060803 | MS.gene074393 | -0.835621 | 1.51E-56 | -1.69E-46 |
| MS.gene060942 | MS.gene074393 | -0.814598 | 1.42E-51 | -1.69E-46 |
| MS.gene060943 | MS.gene074393 | -0.809139 | 2.19E-50 | -1.69E-46 |
| MS.gene060998 | MS.gene074393 | -0.809595 | 1.75E-50 | -1.69E-46 |
| MS.gene061002 | MS.gene074393 | -0.823553 | 1.30E-53 | -1.69E-46 |
| MS.gene061049 | MS.gene074393 | -0.817436 | 3.30E-52 | -1.69E-46 |
| MS.gene061114 | MS.gene074393 | 0.880399 | 5.67E-70 | -1.69E-46 |
| MS.gene061159 | MS.gene074393 | -0.852002 | 6.14E-61 | -1.69E-46 |
PPI:
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene074393.t1 | MTR_3g078590 | 100.000 | 90 | 0 | 0 | 1 | 90 | 1 | 90 | 2.56e-63 | 186 |
| MS.gene074393.t1 | MTR_3g085890 | 69.318 | 88 | 27 | 0 | 1 | 88 | 1 | 88 | 1.66e-43 | 136 |
| MS.gene074393.t1 | MTR_8g080060 | 69.318 | 88 | 27 | 0 | 1 | 88 | 1 | 88 | 4.04e-43 | 135 |
| MS.gene074393.t1 | MTR_7g016060 | 51.220 | 82 | 40 | 0 | 5 | 86 | 3 | 84 | 3.47e-29 | 100 |
| MS.gene074393.t1 | MTR_3g085890 | 63.934 | 61 | 22 | 0 | 27 | 87 | 1 | 61 | 1.80e-25 | 90.1 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene074393.t1 | AT3G48140 | 74.118 | 85 | 22 | 0 | 4 | 88 | 3 | 87 | 1.26e-44 | 139 |
| MS.gene074393.t1 | AT3G29970 | 51.220 | 82 | 40 | 0 | 5 | 86 | 3 | 84 | 8.05e-30 | 101 |
| MS.gene074393.t1 | AT3G29970 | 47.059 | 68 | 36 | 0 | 18 | 85 | 1 | 68 | 2.24e-20 | 77.4 |
| MS.gene074393.t1 | AT3G29970 | 47.059 | 68 | 36 | 0 | 18 | 85 | 1 | 68 | 2.24e-20 | 77.4 |
Find 28 sgRNAs with CRISPR-Local
Find 72 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| AAACATCAGTACCTGACTTC+AGG | 0.347160 | 3.4:+75117125 | None:intergenic |
| TACCCTCTGTTTGCTGCGGT+TGG | 0.396092 | 3.4:-75117200 | MS.gene074393:CDS |
| CTGCGGTTGGAGCTGCTGTT+GGG | 0.406881 | 3.4:-75117187 | MS.gene074393:CDS |
| GCTGCGGTTGGAGCTGCTGT+TGG | 0.426937 | 3.4:-75117188 | MS.gene074393:CDS |
| TTGAGGCCGGGCATAATCTC+TGG | 0.440854 | 3.4:+75116071 | None:intergenic |
| AACATCAGTACCTGACTTCA+GGG | 0.462667 | 3.4:+75117126 | None:intergenic |
| AACAAGCAGTCTCGAGCTGC+AGG | 0.464020 | 3.4:-75116167 | MS.gene074393:CDS |
| AGTGAAGAAGCTGTTGAGGC+CGG | 0.469984 | 3.4:+75116058 | None:intergenic |
| GTCTCGAGCTGCAGGAGTGT+TGG | 0.483795 | 3.4:-75116159 | MS.gene074393:CDS |
| GGGTCTGATCCAGCGATTGG+TGG | 0.513757 | 3.4:+75117314 | None:intergenic |
| AAATAACTTAGTTGCGACTT+GGG | 0.516597 | 3.4:+75116033 | None:intergenic |
| TTCTGTGTACTTCTCTCCCT+CGG | 0.519035 | 3.4:+75116127 | None:intergenic |
| CTCGGGTCTGATCCAGCGAT+TGG | 0.519677 | 3.4:+75117311 | None:intergenic |
| GTGAAGAAGCTGTTGAGGCC+GGG | 0.521542 | 3.4:+75116059 | None:intergenic |
| TATCCATGGCCACCAATCGC+TGG | 0.522115 | 3.4:-75117323 | None:intergenic |
| TCTGCATCAACCCTGAAGTC+AGG | 0.524860 | 3.4:-75117136 | MS.gene074393:intron |
| AAAATAACTTAGTTGCGACT+TGG | 0.526355 | 3.4:+75116032 | None:intergenic |
| GATGTTACGAACAAGTGAAA+AGG | 0.535731 | 3.4:+75117157 | None:intergenic |
| AGATCACCAGAGATTATGCC+CGG | 0.537901 | 3.4:-75116077 | MS.gene074393:CDS |
| GATCCAGCGATTGGTGGCCA+TGG | 0.584846 | 3.4:+75117320 | None:intergenic |
| CTCCAACCGCAGCAAACAGA+GGG | 0.612181 | 3.4:+75117198 | None:intergenic |
| GTGTTGGAGAACTTTGCCGA+GGG | 0.614956 | 3.4:-75116143 | MS.gene074393:CDS |
| GGTATACCCTCTGTTTGCTG+CGG | 0.632424 | 3.4:-75117204 | MS.gene074393:CDS |
| AGTGTTGGAGAACTTTGCCG+AGG | 0.642190 | 3.4:-75116144 | MS.gene074393:CDS |
| GGTCAGTGAAGAAGCTGTTG+AGG | 0.648101 | 3.4:+75116054 | None:intergenic |
| GCTCCAACCGCAGCAAACAG+AGG | 0.651727 | 3.4:+75117197 | None:intergenic |
| CAATCGCTGGATCAGACCCG+AGG | 0.698764 | 3.4:-75117310 | MS.gene074393:intron |
| AGTACACAGAACATTTGCTG+AGG | 0.706764 | 3.4:-75116115 | MS.gene074393:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | AGATATTAACAAAATTTAAT+GGG | - | chr3.4:75116472-75116491 | MS.gene074393:intron | 10.0% |
| !! | TAGATATTAACAAAATTTAA+TGG | - | chr3.4:75116471-75116490 | MS.gene074393:intron | 10.0% |
| !! | ATTAATCTCTAATATCAAAT+AGG | + | chr3.4:75116719-75116738 | None:intergenic | 15.0% |
| !! | TTAATCTCTAATATCAAATA+GGG | + | chr3.4:75116718-75116737 | None:intergenic | 15.0% |
| !!! | AGAGATTAATTTTTATTCAT+TGG | - | chr3.4:75116729-75116748 | MS.gene074393:intron | 15.0% |
| !!! | GAATATTCCTTTTTTATTTT+TGG | - | chr3.4:75116392-75116411 | MS.gene074393:intron | 15.0% |
| !! | AATTAAATAACTCATGTATC+TGG | - | chr3.4:75116549-75116568 | MS.gene074393:intron | 20.0% |
| !! | ACAAATTGTGAAAATTTAAG+CGG | + | chr3.4:75116448-75116467 | None:intergenic | 20.0% |
| !! | AGGAAAACCAAAAATAAAAA+AGG | + | chr3.4:75116402-75116421 | None:intergenic | 20.0% |
| !! | CTAATCGGATAATTAATTAA+TGG | + | chr3.4:75116361-75116380 | None:intergenic | 20.0% |
| !! | GATACATGAGTTATTTAATT+TGG | + | chr3.4:75116549-75116568 | None:intergenic | 20.0% |
| !! | TATACCTATAACAAAAAAGA+TGG | + | chr3.4:75116140-75116159 | None:intergenic | 20.0% |
| !!! | GATTAATTTTTATTCATTGG+AGG | - | chr3.4:75116732-75116751 | MS.gene074393:intron | 20.0% |
| !!! | TGATTAACTAAGTGATTTTT+AGG | - | chr3.4:75116584-75116603 | MS.gene074393:intron | 20.0% |
| ! | ATTCCATCATGTTTACTAAT+CGG | + | chr3.4:75116376-75116395 | None:intergenic | 25.0% |
| ! | TGAGATATAACTTAAAAGAG+TGG | - | chr3.4:75116886-75116905 | MS.gene074393:intron | 25.0% |
| ! | TTTGCACAAATAACGTTTAA+TGG | - | chr3.4:75116671-75116690 | MS.gene074393:intron | 25.0% |
| !! | AATGAAAACTTTTATCTCAC+AGG | - | chr3.4:75117076-75117095 | MS.gene074393:intron | 25.0% |
| !! | ATGAAAACTTTTATCTCACA+GGG | - | chr3.4:75117077-75117096 | MS.gene074393:intron | 25.0% |
| !! | ATGTATGTTTGTTCTTTTGA+TGG | - | chr3.4:75117158-75117177 | MS.gene074393:CDS | 25.0% |
| !! | TGTATGTTTGTTCTTTTGAT+GGG | - | chr3.4:75117159-75117178 | MS.gene074393:CDS | 25.0% |
| !!! | AATGGTGATTTTAAAGTTGT+TGG | - | chr3.4:75116689-75116708 | MS.gene074393:intron | 25.0% |
| !!! | TGATTGATTTTTCTCTTCTT+TGG | - | chr3.4:75116287-75116306 | MS.gene074393:intron | 25.0% |
| !!! | TTCACCATCTTTTTTGTTAT+AGG | - | chr3.4:75116133-75116152 | MS.gene074393:CDS | 25.0% |
| !!! | TTGTTGTTTAATTTTTAGCC+AGG | - | chr3.4:75117109-75117128 | MS.gene074393:intron | 25.0% |
| !!! | TTTAATTTTTAGCCAGGATT+TGG | - | chr3.4:75117115-75117134 | MS.gene074393:intron | 25.0% |
| ACGAAATGCAAAGTAGTAAA+TGG | + | chr3.4:75116099-75116118 | None:intergenic | 30.0% | |
| CATCATATCATTTCTCAGAT+AGG | + | chr3.4:75116422-75116441 | None:intergenic | 30.0% | |
| TATCCGATTAGTAAACATGA+TGG | - | chr3.4:75116370-75116389 | MS.gene074393:intron | 30.0% | |
| !!! | TTGTTCTTTTGATGGGTTTA+GGG | - | chr3.4:75117166-75117185 | MS.gene074393:CDS | 30.0% |
| !!! | TTTGTTCTTTTGATGGGTTT+AGG | - | chr3.4:75117165-75117184 | MS.gene074393:CDS | 30.0% |
| AAATCCATGATATGTTTGCC+TGG | - | chr3.4:75116974-75116993 | MS.gene074393:intron | 35.0% | |
| AACTTAAAAGAGTGGCATCA+TGG | - | chr3.4:75116894-75116913 | MS.gene074393:intron | 35.0% | |
| ACTCATGTATCTGGACTAAA+TGG | - | chr3.4:75116558-75116577 | MS.gene074393:intron | 35.0% | |
| GACAAATCAGCTTCAATCAT+CGG | + | chr3.4:75116633-75116652 | None:intergenic | 35.0% | |
| GATGTTACGAACAAGTGAAA+AGG | + | chr3.4:75116204-75116223 | None:intergenic | 35.0% | |
| TGCATTTCGTAAGAGAGTTA+GGG | - | chr3.4:75116109-75116128 | MS.gene074393:CDS | 35.0% | |
| TGGCAAAATACAGATCGAAA+AGG | + | chr3.4:75116079-75116098 | None:intergenic | 35.0% | |
| TTGCATTTCGTAAGAGAGTT+AGG | - | chr3.4:75116108-75116127 | MS.gene074393:CDS | 35.0% | |
| ! | GAGTTTGACTTATCTCAGAT+CGG | - | chr3.4:75116309-75116328 | MS.gene074393:intron | 35.0% |
| ! | TGGTGTTTGAAGGAGTATAA+TGG | - | chr3.4:75117135-75117154 | MS.gene074393:intron | 35.0% |
| AAACATCAGTACCTGACTTC+AGG | + | chr3.4:75116236-75116255 | None:intergenic | 40.0% | |
| AACATCAGTACCTGACTTCA+GGG | + | chr3.4:75116235-75116254 | None:intergenic | 40.0% | |
| AAGTCGCTTATAGAGAGAGT+AGG | + | chr3.4:75116514-75116533 | None:intergenic | 40.0% | |
| CTGGTTGAGTGAAATGAAGT+CGG | - | chr3.4:75116993-75117012 | MS.gene074393:intron | 40.0% | |
| TCAACCAGGCAAACATATCA+TGG | + | chr3.4:75116981-75117000 | None:intergenic | 40.0% | |
| ! | AGTACACAGAACATTTGCTG+AGG | - | chr3.4:75117243-75117262 | MS.gene074393:intron | 40.0% |
| AGATCACCAGAGATTATGCC+CGG | - | chr3.4:75117281-75117300 | MS.gene074393:intron | 45.0% | |
| AGATCGAAAAGGACTCACCT+CGG | + | chr3.4:75116068-75116087 | None:intergenic | 45.0% | |
| CGACTTCATTTCACTCAACC+AGG | + | chr3.4:75116995-75117014 | None:intergenic | 45.0% | |
| CTCCTTCAAACACCAAATCC+TGG | + | chr3.4:75117130-75117149 | None:intergenic | 45.0% | |
| TTCTGTGTACTTCTCTCCCT+CGG | + | chr3.4:75117234-75117253 | None:intergenic | 45.0% | |
| !! | AGCCAGGATTTGGTGTTTGA+AGG | - | chr3.4:75117125-75117144 | MS.gene074393:intron | 45.0% |
| AGTGAAGAAGCTGTTGAGGC+CGG | + | chr3.4:75117303-75117322 | None:intergenic | 50.0% | |
| GATCGAAAAGGACTCACCTC+GGG | + | chr3.4:75116067-75116086 | None:intergenic | 50.0% | |
| GGTCAGTGAAGAAGCTGTTG+AGG | + | chr3.4:75117307-75117326 | None:intergenic | 50.0% | |
| GTGTTGGAGAACTTTGCCGA+GGG | - | chr3.4:75117215-75117234 | MS.gene074393:intron | 50.0% | |
| TCTGCATCAACCCTGAAGTC+AGG | - | chr3.4:75116222-75116241 | MS.gene074393:intron | 50.0% | |
| ! | AGTGTTGGAGAACTTTGCCG+AGG | - | chr3.4:75117214-75117233 | MS.gene074393:intron | 50.0% |
| ! | GGTATACCCTCTGTTTGCTG+CGG | - | chr3.4:75116154-75116173 | MS.gene074393:CDS | 50.0% |
| AACAAGCAGTCTCGAGCTGC+AGG | - | chr3.4:75117191-75117210 | MS.gene074393:CDS | 55.0% | |
| CTCCAACCGCAGCAAACAGA+GGG | + | chr3.4:75116163-75116182 | None:intergenic | 55.0% | |
| GTGAAGAAGCTGTTGAGGCC+GGG | + | chr3.4:75117302-75117321 | None:intergenic | 55.0% | |
| TTGAGGCCGGGCATAATCTC+TGG | + | chr3.4:75117290-75117309 | None:intergenic | 55.0% | |
| ! | TACCCTCTGTTTGCTGCGGT+TGG | - | chr3.4:75116158-75116177 | MS.gene074393:CDS | 55.0% |
| CAATCGCTGGATCAGACCCG+AGG | - | chr3.4:75116048-75116067 | MS.gene074393:CDS | 60.0% | |
| CTCGGGTCTGATCCAGCGAT+TGG | + | chr3.4:75116050-75116069 | None:intergenic | 60.0% | |
| CTGCGGTTGGAGCTGCTGTT+GGG | - | chr3.4:75116171-75116190 | MS.gene074393:CDS | 60.0% | |
| GCTCCAACCGCAGCAAACAG+AGG | + | chr3.4:75116164-75116183 | None:intergenic | 60.0% | |
| GGGTCTGATCCAGCGATTGG+TGG | + | chr3.4:75116047-75116066 | None:intergenic | 60.0% | |
| ! | GTCTCGAGCTGCAGGAGTGT+TGG | - | chr3.4:75117199-75117218 | MS.gene074393:CDS | 60.0% |
| GCTGCGGTTGGAGCTGCTGT+TGG | - | chr3.4:75116170-75116189 | MS.gene074393:CDS | 65.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr3.4 | gene | 75116040 | 75117340 | 75116040 | ID=MS.gene074393 |
| chr3.4 | mRNA | 75116040 | 75117340 | 75116040 | ID=MS.gene074393.t1;Parent=MS.gene074393 |
| chr3.4 | exon | 75117311 | 75117340 | 75117311 | ID=MS.gene074393.t1.exon1;Parent=MS.gene074393.t1 |
| chr3.4 | CDS | 75117311 | 75117340 | 75117311 | ID=cds.MS.gene074393.t1;Parent=MS.gene074393.t1 |
| chr3.4 | exon | 75117137 | 75117225 | 75117137 | ID=MS.gene074393.t1.exon2;Parent=MS.gene074393.t1 |
| chr3.4 | CDS | 75117137 | 75117225 | 75117137 | ID=cds.MS.gene074393.t1;Parent=MS.gene074393.t1 |
| chr3.4 | exon | 75116040 | 75116193 | 75116040 | ID=MS.gene074393.t1.exon3;Parent=MS.gene074393.t1 |
| chr3.4 | CDS | 75116040 | 75116193 | 75116040 | ID=cds.MS.gene074393.t1;Parent=MS.gene074393.t1 |
| Gene Sequence |
| Protein sequence |
