Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene07910.t1 | XP_013451880.1 | 98.3 | 294 | 5 | 0 | 1 | 294 | 1 | 294 | 7.90E-159 | 569.7 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene07910.t1 | Q9SRE0 | 68.6 | 303 | 81 | 3 | 6 | 294 | 2 | 304 | 6.0e-107 | 388.7 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene07910.t1 | I3T039 | 98.3 | 294 | 5 | 0 | 1 | 294 | 1 | 294 | 5.7e-159 | 569.7 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| MS.gene049137 | MS.gene07910 | 0.811767 | 5.94E-51 | -1.69E-46 |
| MS.gene049217 | MS.gene07910 | 0.807818 | 4.20E-50 | -1.69E-46 |
| MS.gene049222 | MS.gene07910 | 0.810078 | 1.38E-50 | -1.69E-46 |
| MS.gene049285 | MS.gene07910 | 0.8241 | 9.69E-54 | -1.69E-46 |
| MS.gene049369 | MS.gene07910 | 0.82032 | 7.30E-53 | -1.69E-46 |
| MS.gene049427 | MS.gene07910 | 0.832602 | 8.61E-56 | -1.69E-46 |
| MS.gene049491 | MS.gene07910 | 0.810272 | 1.25E-50 | -1.69E-46 |
| MS.gene049609 | MS.gene07910 | 0.833436 | 5.34E-56 | -1.69E-46 |
| MS.gene049614 | MS.gene07910 | 0.84219 | 3.01E-58 | -1.69E-46 |
| MS.gene049805 | MS.gene07910 | 0.890223 | 1.20E-73 | -1.69E-46 |
| MS.gene050076 | MS.gene07910 | 0.818848 | 1.58E-52 | -1.69E-46 |
| MS.gene050163 | MS.gene07910 | 0.806589 | 7.65E-50 | -1.69E-46 |
| MS.gene050333 | MS.gene07910 | 0.814155 | 1.78E-51 | -1.69E-46 |
| MS.gene050432 | MS.gene07910 | 0.837273 | 5.73E-57 | -1.69E-46 |
| MS.gene050444 | MS.gene07910 | 0.814618 | 1.41E-51 | -1.69E-46 |
| MS.gene050593 | MS.gene07910 | 0.820595 | 6.31E-53 | -1.69E-46 |
| MS.gene050747 | MS.gene07910 | 0.815653 | 8.28E-52 | -1.69E-46 |
| MS.gene050767 | MS.gene07910 | 0.828483 | 8.77E-55 | -1.69E-46 |
| MS.gene050770 | MS.gene07910 | 0.832397 | 9.68E-56 | -1.69E-46 |
| MS.gene050772 | MS.gene07910 | 0.842944 | 1.90E-58 | -1.69E-46 |
| MS.gene050950 | MS.gene07910 | 0.810937 | 8.99E-51 | -1.69E-46 |
| MS.gene05101 | MS.gene07910 | 0.818029 | 2.43E-52 | -1.69E-46 |
| MS.gene05105 | MS.gene07910 | 0.812924 | 3.32E-51 | -1.69E-46 |
| MS.gene051228 | MS.gene07910 | 0.839168 | 1.86E-57 | -1.69E-46 |
| MS.gene051387 | MS.gene07910 | 0.845107 | 4.99E-59 | -1.69E-46 |
| MS.gene051666 | MS.gene07910 | 0.818146 | 2.28E-52 | -1.69E-46 |
| MS.gene051692 | MS.gene07910 | 0.863688 | 2.08E-64 | -1.69E-46 |
| MS.gene051810 | MS.gene07910 | 0.819367 | 1.21E-52 | -1.69E-46 |
| MS.gene051858 | MS.gene07910 | 0.817439 | 3.30E-52 | -1.69E-46 |
| MS.gene052271 | MS.gene07910 | 0.848386 | 6.33E-60 | -1.69E-46 |
| MS.gene052290 | MS.gene07910 | 0.831138 | 1.98E-55 | -1.69E-46 |
| MS.gene052310 | MS.gene07910 | 0.831818 | 1.35E-55 | -1.69E-46 |
| MS.gene052322 | MS.gene07910 | 0.829367 | 5.36E-55 | -1.69E-46 |
| MS.gene052340 | MS.gene07910 | 0.808081 | 3.69E-50 | -1.69E-46 |
| MS.gene052379 | MS.gene07910 | 0.858478 | 8.02E-63 | -1.69E-46 |
| MS.gene052421 | MS.gene07910 | 0.852515 | 4.39E-61 | -1.69E-46 |
| MS.gene052481 | MS.gene07910 | 0.821317 | 4.30E-53 | -1.69E-46 |
| MS.gene052484 | MS.gene07910 | 0.844643 | 6.66E-59 | -1.69E-46 |
| MS.gene052485 | MS.gene07910 | 0.808905 | 2.46E-50 | -1.69E-46 |
| MS.gene052615 | MS.gene07910 | 0.864035 | 1.62E-64 | -1.69E-46 |
| MS.gene052870 | MS.gene07910 | 0.8283 | 9.71E-55 | -1.69E-46 |
| MS.gene052872 | MS.gene07910 | 0.819393 | 1.19E-52 | -1.69E-46 |
| MS.gene053009 | MS.gene07910 | 0.810022 | 1.42E-50 | -1.69E-46 |
| MS.gene053103 | MS.gene07910 | 0.873155 | 1.83E-67 | -1.69E-46 |
| MS.gene053104 | MS.gene07910 | 0.842025 | 3.33E-58 | -1.69E-46 |
| MS.gene053207 | MS.gene07910 | 0.837901 | 3.95E-57 | -1.69E-46 |
| MS.gene053209 | MS.gene07910 | 0.836202 | 1.07E-56 | -1.69E-46 |
| MS.gene053213 | MS.gene07910 | 0.839753 | 1.31E-57 | -1.69E-46 |
| MS.gene053286 | MS.gene07910 | 0.828878 | 7.04E-55 | -1.69E-46 |
| MS.gene053322 | MS.gene07910 | 0.877812 | 4.65E-69 | -1.69E-46 |
| MS.gene053449 | MS.gene07910 | 0.856036 | 4.22E-62 | -1.69E-46 |
| MS.gene053632 | MS.gene07910 | 0.836059 | 1.17E-56 | -1.69E-46 |
| MS.gene053813 | MS.gene07910 | 0.822503 | 2.29E-53 | -1.69E-46 |
| MS.gene053824 | MS.gene07910 | 0.814243 | 1.70E-51 | -1.69E-46 |
| MS.gene053912 | MS.gene07910 | 0.829658 | 4.55E-55 | -1.69E-46 |
| MS.gene053916 | MS.gene07910 | 0.809617 | 1.73E-50 | -1.69E-46 |
| MS.gene054123 | MS.gene07910 | 0.803515 | 3.36E-49 | -1.69E-46 |
| MS.gene054376 | MS.gene07910 | 0.810779 | 9.73E-51 | -1.69E-46 |
| MS.gene054408 | MS.gene07910 | 0.824571 | 7.51E-54 | -1.69E-46 |
| MS.gene054595 | MS.gene07910 | 0.802071 | 6.68E-49 | -1.69E-46 |
| MS.gene054600 | MS.gene07910 | 0.822303 | 2.55E-53 | -1.69E-46 |
| MS.gene054642 | MS.gene07910 | 0.823198 | 1.58E-53 | -1.69E-46 |
| MS.gene054802 | MS.gene07910 | 0.806778 | 6.97E-50 | -1.69E-46 |
| MS.gene054803 | MS.gene07910 | 0.806384 | 8.45E-50 | -1.69E-46 |
| MS.gene054804 | MS.gene07910 | 0.80911 | 2.22E-50 | -1.69E-46 |
| MS.gene05505 | MS.gene07910 | 0.857186 | 1.94E-62 | -1.69E-46 |
| MS.gene055206 | MS.gene07910 | 0.853827 | 1.85E-61 | -1.69E-46 |
| MS.gene055212 | MS.gene07910 | 0.816201 | 6.25E-52 | -1.69E-46 |
| MS.gene055277 | MS.gene07910 | 0.8112 | 7.89E-51 | -1.69E-46 |
| MS.gene055289 | MS.gene07910 | 0.809107 | 2.23E-50 | -1.69E-46 |
| MS.gene055362 | MS.gene07910 | 0.805307 | 1.42E-49 | -1.69E-46 |
| MS.gene055397 | MS.gene07910 | 0.82015 | 7.99E-53 | -1.69E-46 |
| MS.gene055412 | MS.gene07910 | 0.87029 | 1.63E-66 | -1.69E-46 |
| MS.gene055499 | MS.gene07910 | 0.835479 | 1.64E-56 | -1.69E-46 |
| MS.gene055502 | MS.gene07910 | 0.814751 | 1.31E-51 | -1.69E-46 |
| MS.gene055636 | MS.gene07910 | 0.822873 | 1.88E-53 | -1.69E-46 |
| MS.gene055647 | MS.gene07910 | 0.842898 | 1.95E-58 | -1.69E-46 |
| MS.gene055722 | MS.gene07910 | 0.842559 | 2.40E-58 | -1.69E-46 |
| MS.gene05592 | MS.gene07910 | 0.857612 | 1.45E-62 | -1.69E-46 |
| MS.gene055941 | MS.gene07910 | 0.837829 | 4.13E-57 | -1.69E-46 |
| MS.gene056374 | MS.gene07910 | 0.842293 | 2.82E-58 | -1.69E-46 |
| MS.gene056410 | MS.gene07910 | 0.801575 | 8.44E-49 | -1.69E-46 |
| MS.gene056511 | MS.gene07910 | 0.808939 | 2.42E-50 | -1.69E-46 |
| MS.gene056549 | MS.gene07910 | 0.807623 | 4.62E-50 | -1.69E-46 |
| MS.gene056609 | MS.gene07910 | 0.83973 | 1.33E-57 | -1.69E-46 |
| MS.gene056657 | MS.gene07910 | 0.813689 | 2.25E-51 | -1.69E-46 |
| MS.gene056897 | MS.gene07910 | 0.8429 | 1.95E-58 | -1.69E-46 |
| MS.gene057011 | MS.gene07910 | 0.85309 | 3.01E-61 | -1.69E-46 |
| MS.gene057076 | MS.gene07910 | 0.813416 | 2.59E-51 | -1.69E-46 |
| MS.gene057123 | MS.gene07910 | 0.830539 | 2.77E-55 | -1.69E-46 |
| MS.gene057124 | MS.gene07910 | 0.808659 | 2.78E-50 | -1.69E-46 |
| MS.gene057129 | MS.gene07910 | 0.858369 | 8.64E-63 | -1.69E-46 |
| MS.gene057146 | MS.gene07910 | 0.840657 | 7.62E-58 | -1.69E-46 |
| MS.gene057285 | MS.gene07910 | 0.817528 | 3.15E-52 | -1.69E-46 |
| MS.gene057295 | MS.gene07910 | 0.80322 | 3.87E-49 | -1.69E-46 |
| MS.gene057331 | MS.gene07910 | 0.825329 | 4.97E-54 | -1.69E-46 |
| MS.gene05733 | MS.gene07910 | 0.816462 | 5.46E-52 | -1.69E-46 |
| MS.gene05735 | MS.gene07910 | 0.811688 | 6.18E-51 | -1.69E-46 |
| MS.gene057416 | MS.gene07910 | 0.861844 | 7.71E-64 | -1.69E-46 |
| MS.gene057856 | MS.gene07910 | 0.804584 | 2.01E-49 | -1.69E-46 |
| MS.gene058006 | MS.gene07910 | 0.836192 | 1.08E-56 | -1.69E-46 |
| MS.gene058019 | MS.gene07910 | 0.827289 | 1.70E-54 | -1.69E-46 |
| MS.gene058293 | MS.gene07910 | 0.823058 | 1.70E-53 | -1.69E-46 |
| MS.gene058323 | MS.gene07910 | 0.81388 | 2.05E-51 | -1.69E-46 |
| MS.gene058419 | MS.gene07910 | 0.821433 | 4.05E-53 | -1.69E-46 |
| MS.gene058660 | MS.gene07910 | 0.813004 | 3.19E-51 | -1.69E-46 |
| MS.gene058773 | MS.gene07910 | 0.805686 | 1.18E-49 | -1.69E-46 |
| MS.gene058838 | MS.gene07910 | 0.807315 | 5.37E-50 | -1.69E-46 |
| MS.gene058928 | MS.gene07910 | 0.832774 | 7.80E-56 | -1.69E-46 |
| MS.gene059029 | MS.gene07910 | 0.821235 | 4.50E-53 | -1.69E-46 |
| MS.gene059305 | MS.gene07910 | 0.811675 | 6.22E-51 | -1.69E-46 |
| MS.gene05934 | MS.gene07910 | 0.807709 | 4.43E-50 | -1.69E-46 |
| MS.gene059455 | MS.gene07910 | 0.80043 | 1.45E-48 | -1.69E-46 |
| MS.gene059536 | MS.gene07910 | 0.853877 | 1.79E-61 | -1.69E-46 |
| MS.gene059597 | MS.gene07910 | 0.819226 | 1.30E-52 | -1.69E-46 |
| MS.gene059676 | MS.gene07910 | 0.834904 | 2.29E-56 | -1.69E-46 |
| MS.gene059677 | MS.gene07910 | 0.800995 | 1.11E-48 | -1.69E-46 |
| MS.gene059688 | MS.gene07910 | 0.839036 | 2.01E-57 | -1.69E-46 |
| MS.gene059692 | MS.gene07910 | 0.841483 | 4.62E-58 | -1.69E-46 |
| MS.gene059695 | MS.gene07910 | 0.839773 | 1.30E-57 | -1.69E-46 |
| MS.gene059711 | MS.gene07910 | 0.836043 | 1.18E-56 | -1.69E-46 |
| MS.gene059718 | MS.gene07910 | 0.821569 | 3.77E-53 | -1.69E-46 |
| MS.gene059894 | MS.gene07910 | 0.817206 | 3.72E-52 | -1.69E-46 |
| MS.gene059902 | MS.gene07910 | 0.811173 | 7.99E-51 | -1.69E-46 |
| MS.gene059960 | MS.gene07910 | 0.859219 | 4.81E-63 | -1.69E-46 |
| MS.gene060403 | MS.gene07910 | 0.807006 | 6.24E-50 | -1.69E-46 |
| MS.gene060469 | MS.gene07910 | 0.800348 | 1.50E-48 | -1.69E-46 |
| MS.gene060727 | MS.gene07910 | 0.805174 | 1.52E-49 | -1.69E-46 |
| MS.gene060804 | MS.gene07910 | 0.840046 | 1.10E-57 | -1.69E-46 |
| MS.gene060818 | MS.gene07910 | 0.865632 | 5.13E-65 | -1.69E-46 |
| MS.gene060837 | MS.gene07910 | 0.827798 | 1.28E-54 | -1.69E-46 |
| MS.gene06092 | MS.gene07910 | 0.814068 | 1.86E-51 | -1.69E-46 |
| MS.gene061041 | MS.gene07910 | 0.840471 | 8.52E-58 | -1.69E-46 |
| MS.gene061051 | MS.gene07910 | -0.810167 | 1.32E-50 | -1.69E-46 |
| MS.gene061150 | MS.gene07910 | 0.824562 | 7.55E-54 | -1.69E-46 |
| MS.gene061200 | MS.gene07910 | 0.861472 | 1.00E-63 | -1.69E-46 |
PPI:
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene07910.t1 | MTR_6g037530 | 98.299 | 294 | 5 | 0 | 1 | 294 | 1 | 294 | 0.0 | 598 |
| MS.gene07910.t1 | MTR_6g037530 | 97.797 | 227 | 5 | 0 | 1 | 227 | 1 | 227 | 1.07e-164 | 457 |
| MS.gene07910.t1 | MTR_6g037560 | 82.000 | 50 | 9 | 0 | 178 | 227 | 31 | 80 | 9.16e-25 | 95.5 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene07910.t1 | AT1G76730 | 68.647 | 303 | 81 | 3 | 6 | 294 | 2 | 304 | 1.42e-143 | 408 |
Find 76 sgRNAs with CRISPR-Local
Find 256 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| TCCAATTGGTCGACCATATT+TGG | 0.146364 | 6.4:+11460410 | None:intergenic |
| AAAGTAGATCTTATTGTTAT+TGG | 0.152589 | 6.4:-11460372 | MS.gene07910:CDS |
| GTCAGATTTCTCACTCTTTC+AGG | 0.185200 | 6.4:-11461361 | MS.gene07910:intron |
| ATATGGTATGTTGCGTTATA+TGG | 0.257841 | 6.4:-11459589 | MS.gene07910:CDS |
| GGGTGATTAGAAAGAGGATA+TGG | 0.270926 | 6.4:-11462930 | MS.gene07910:CDS |
| AGAGAAGCACCAACAAAATT+AGG | 0.289230 | 6.4:+11462850 | None:intergenic |
| ACTTGTTTCTGAGGAGAATC+TGG | 0.290978 | 6.4:+11461382 | None:intergenic |
| ATCACCCATTTCCAAGCTTT+CGG | 0.323242 | 6.4:+11462946 | None:intergenic |
| TTTCACCAACCTTGAGGCTT+TGG | 0.328664 | 6.4:+11458888 | None:intergenic |
| AAAGAGGATATGGGATTTGA+TGG | 0.331100 | 6.4:-11462920 | MS.gene07910:CDS |
| CCTAATCGAGCACCTGTGTT+CGG | 0.335307 | 6.4:+11460333 | None:intergenic |
| TGAGTCAAATATGTTAACTT+TGG | 0.344058 | 6.4:-11460469 | MS.gene07910:CDS |
| TGCTTCTCTTGCTGCTGATA+AGG | 0.356639 | 6.4:-11462836 | MS.gene07910:intron |
| GAGTCAAATATGTTAACTTT+GGG | 0.360873 | 6.4:-11460468 | MS.gene07910:CDS |
| GGATTTGCAGAACTTGAATA+TGG | 0.362270 | 6.4:-11459606 | MS.gene07910:CDS |
| AACTTCCATTTCATTCAAAC+TGG | 0.367672 | 6.4:-11463100 | MS.gene07910:CDS |
| GCCAAATATGGTCGACCAAT+TGG | 0.376504 | 6.4:-11460411 | MS.gene07910:CDS |
| CTTCAATGAGGCTGCTTTCG+AGG | 0.380498 | 6.4:-11463046 | MS.gene07910:CDS |
| AGGAAGCCTGTACTTCTGTT+GGG | 0.384062 | 6.4:-11460437 | MS.gene07910:CDS |
| CTAATCGAGCACCTGTGTTC+GGG | 0.385036 | 6.4:+11460334 | None:intergenic |
| ATGATCCGAAAGCTTGGAAA+TGG | 0.388819 | 6.4:-11462951 | MS.gene07910:CDS |
| AGCTTTGTTGTTGCTGCTGT+TGG | 0.404430 | 6.4:+11463071 | None:intergenic |
| GGCTTCCAGTTTGAATGAAA+TGG | 0.406006 | 6.4:+11463095 | None:intergenic |
| TCTGTTGGGGTTGCCAAATA+TGG | 0.406711 | 6.4:-11460423 | MS.gene07910:CDS |
| TTAGGAATCCTATGATGAAC+AGG | 0.427277 | 6.4:+11462868 | None:intergenic |
| CTCGAAAGCAGCCTCATTGA+AGG | 0.427405 | 6.4:+11463047 | None:intergenic |
| GTGGAGAGAGAGCGGTAAAG+AGG | 0.427620 | 6.4:+11463132 | None:intergenic |
| CCGAACACAGGTGCTCGATT+AGG | 0.445240 | 6.4:-11460333 | MS.gene07910:CDS |
| TAAAGAGGAGAGAGAGTGAA+TGG | 0.446819 | 6.4:+11463147 | None:intergenic |
| TTTGTTGTTGCTGCTGTTGG+TGG | 0.449518 | 6.4:+11463074 | None:intergenic |
| TGCAGGATGATCCGAAAGCT+TGG | 0.462695 | 6.4:-11462957 | MS.gene07910:CDS |
| TCGTCGAGCAATGGCGGTTG+AGG | 0.465106 | 6.4:-11462995 | MS.gene07910:CDS |
| CTGGAATGTCATCCACCAAT+TGG | 0.474668 | 6.4:+11458991 | None:intergenic |
| ATCCTAGACCTGTTCATCAT+AGG | 0.476390 | 6.4:-11462876 | MS.gene07910:CDS |
| AAATGGAAACACAAGCATTA+CGG | 0.488225 | 6.4:-11463179 | MS.gene07910:CDS |
| GTTAACTTTGGGTACCATCA+AGG | 0.493467 | 6.4:-11460457 | MS.gene07910:CDS |
| AAGGAAGCCTGTACTTCTGT+TGG | 0.495849 | 6.4:-11460438 | MS.gene07910:CDS |
| TACAGTGCATGACTGCCAAT+TGG | 0.497413 | 6.4:-11459006 | MS.gene07910:intron |
| ATCCTATGATGAACAGGTCT+AGG | 0.500568 | 6.4:+11462874 | None:intergenic |
| AGAAGTACAGGCTTCCTTGA+TGG | 0.501762 | 6.4:+11460443 | None:intergenic |
| CCAACCTTGAGGCTTTGGAA+TGG | 0.506593 | 6.4:+11458893 | None:intergenic |
| GGCAACCCCAACAGAAGTAC+AGG | 0.513556 | 6.4:+11460431 | None:intergenic |
| CGCAGAAGCTCGTCGAGCAA+TGG | 0.514659 | 6.4:-11463004 | MS.gene07910:CDS |
| CCTCAACCACGGCTGAGGAC+AGG | 0.514670 | 6.4:-11460507 | MS.gene07910:CDS |
| TTGAATGAAATGGAAGTTTG+TGG | 0.520804 | 6.4:+11463105 | None:intergenic |
| AGGATATGGGATTTGATGGA+AGG | 0.523046 | 6.4:-11462916 | MS.gene07910:CDS |
| GGTGTACAAATGATATCTAC+TGG | 0.525049 | 6.4:+11458942 | None:intergenic |
| CCTGTCCTCAGCCGTGGTTG+AGG | 0.530300 | 6.4:+11460507 | None:intergenic |
| TATGGTATGTTGCGTTATAT+GGG | 0.539407 | 6.4:-11459588 | MS.gene07910:CDS |
| GGTGATTAGAAAGAGGATAT+GGG | 0.539605 | 6.4:-11462929 | MS.gene07910:CDS |
| GGATATGGGATTTGATGGAA+GGG | 0.547035 | 6.4:-11462915 | MS.gene07910:CDS |
| TCGACGAGCTTCTGCGTCGA+GGG | 0.548360 | 6.4:+11463011 | None:intergenic |
| GGAAGCCTGTACTTCTGTTG+GGG | 0.552921 | 6.4:-11460436 | MS.gene07910:CDS |
| GGAGGAGAAATCTTCGATGC+AGG | 0.557726 | 6.4:-11462974 | MS.gene07910:CDS |
| TCAACACTAGTTGTTACCTC+AGG | 0.563225 | 6.4:-11459552 | MS.gene07910:intron |
| TGATCCGAAAGCTTGGAAAT+GGG | 0.564177 | 6.4:-11462950 | MS.gene07910:CDS |
| CACAGGTGCTCGATTAGGAA+AGG | 0.564387 | 6.4:-11460328 | MS.gene07910:CDS |
| GGAAATGGGTGATTAGAAAG+AGG | 0.564862 | 6.4:-11462936 | MS.gene07910:CDS |
| CTCGACGAGCTTCTGCGTCG+AGG | 0.571275 | 6.4:+11463010 | None:intergenic |
| TGATATCTACTGGTACATCA+TGG | 0.573249 | 6.4:+11458952 | None:intergenic |
| TCGAGCAATGGCGGTTGAGG+AGG | 0.573614 | 6.4:-11462992 | MS.gene07910:CDS |
| AGAAATCTGACTTGTTTCTG+AGG | 0.583571 | 6.4:+11461373 | None:intergenic |
| TATCATTTGTACACCAACTC+AGG | 0.586302 | 6.4:-11458934 | MS.gene07910:CDS |
| TAACTCCTCAACCACGGCTG+AGG | 0.589739 | 6.4:-11460512 | MS.gene07910:CDS |
| ACAGGTGCTCGATTAGGAAA+GGG | 0.589862 | 6.4:-11460327 | MS.gene07910:CDS |
| ACATCCATTCCAAAGCCTCA+AGG | 0.592719 | 6.4:-11458897 | None:intergenic |
| TGCTCGATTAGGAAAGGGAG+AGG | 0.600130 | 6.4:-11460322 | MS.gene07910:intron |
| CAATGAGGCTGCTTTCGAGG+CGG | 0.604639 | 6.4:-11463043 | MS.gene07910:CDS |
| AGTGCATGACTGCCAATTGG+TGG | 0.605351 | 6.4:-11459003 | MS.gene07910:CDS |
| AGAAGCTCGTCGAGCAATGG+CGG | 0.611097 | 6.4:-11463001 | MS.gene07910:CDS |
| GTCGCTGTTGACCCGAACAC+AGG | 0.615234 | 6.4:-11460345 | MS.gene07910:CDS |
| CAACAAAGCTTCCTTCAATG+AGG | 0.627995 | 6.4:-11463058 | MS.gene07910:CDS |
| AGGCTGCTTTCGAGGCGGAG+CGG | 0.662213 | 6.4:-11463038 | MS.gene07910:CDS |
| CCGCGATGCACAATGTGTGA+AGG | 0.680082 | 6.4:-11461410 | MS.gene07910:CDS |
| CCTTCACACATTGTGCATCG+CGG | 0.691529 | 6.4:+11461410 | None:intergenic |
| AATTGTTAACTCCTCAACCA+CGG | 0.699483 | 6.4:-11460518 | MS.gene07910:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | AAAAATATAGTTACAATAAA+AGG | + | chr6.4:11462334-11462353 | None:intergenic | 10.0% |
| !! | ATAGTAAAGTAAAGTTAAAA+TGG | + | chr6.4:11461327-11461346 | None:intergenic | 15.0% |
| !! | TAATTTCTATGGTATAAAAT+AGG | + | chr6.4:11462073-11462092 | None:intergenic | 15.0% |
| !! | TTATTAGCATTATTAGATAT+AGG | - | chr6.4:11460867-11460886 | MS.gene07910:intron | 15.0% |
| !! | TTTATAATATTTAAACAAGC+AGG | + | chr6.4:11462253-11462272 | None:intergenic | 15.0% |
| !!! | AAATATTTCTCTTATTTACA+AGG | - | chr6.4:11462681-11462700 | MS.gene07910:intron | 15.0% |
| !!! | ACTCTTGATTTTTAAATTAA+TGG | - | chr6.4:11461071-11461090 | MS.gene07910:intron | 15.0% |
| !!! | ATATTTTATATCATTTTTCG+TGG | - | chr6.4:11461285-11461304 | MS.gene07910:intron | 15.0% |
| !!! | TGATTATGTAAAATTGATTT+TGG | - | chr6.4:11459513-11459532 | MS.gene07910:intron | 15.0% |
| !! | AAAAAGATTCTTGAAAAGAT+AGG | + | chr6.4:11460061-11460080 | None:intergenic | 20.0% |
| !! | AAAGTAGATCTTATTGTTAT+TGG | - | chr6.4:11461703-11461722 | MS.gene07910:intron | 20.0% |
| !! | ACAAAATTTCTGTTACATAA+AGG | + | chr6.4:11461403-11461422 | None:intergenic | 20.0% |
| !! | AGAATTTATTCTAACATGTT+TGG | + | chr6.4:11459670-11459689 | None:intergenic | 20.0% |
| !! | ATAAGAATGAGTAATTTCTA+TGG | + | chr6.4:11462084-11462103 | None:intergenic | 20.0% |
| !! | CAAAATTTCTGTTACATAAA+GGG | + | chr6.4:11461402-11461421 | None:intergenic | 20.0% |
| !! | CTATTCTATACAATAACTAT+TGG | + | chr6.4:11462381-11462400 | None:intergenic | 20.0% |
| !! | GAATTGAATTACATGATTAA+AGG | - | chr6.4:11460010-11460029 | MS.gene07910:intron | 20.0% |
| !! | TGAATATTAGATGTAACAAA+GGG | - | chr6.4:11459982-11460001 | MS.gene07910:intron | 20.0% |
| !! | TGCTAATAAAAATCAAATTG+TGG | + | chr6.4:11460856-11460875 | None:intergenic | 20.0% |
| !! | TTAGAGTTTAGACAATAAAA+TGG | + | chr6.4:11459943-11459962 | None:intergenic | 20.0% |
| !! | TTGAATATTAGATGTAACAA+AGG | - | chr6.4:11459981-11460000 | MS.gene07910:intron | 20.0% |
| !! | TTGTTACATCTAATATTCAA+GGG | + | chr6.4:11459981-11460000 | None:intergenic | 20.0% |
| !! | TTTGTTACATCTAATATTCA+AGG | + | chr6.4:11459982-11460001 | None:intergenic | 20.0% |
| !!! | CACAAATTTTGTTTTTGAAA+AGG | - | chr6.4:11462658-11462677 | MS.gene07910:intron | 20.0% |
| !!! | CTTTTCAAAAACAAAATTTG+TGG | + | chr6.4:11462660-11462679 | None:intergenic | 20.0% |
| !!! | TATCTTTTCAAGAATCTTTT+TGG | - | chr6.4:11460060-11460079 | MS.gene07910:intron | 20.0% |
| !!! | TATTTTACTTAAAAGTGAGT+TGG | - | chr6.4:11459424-11459443 | MS.gene07910:intron | 20.0% |
| !!! | TTATCAAAAATCTCATCTTT+TGG | - | chr6.4:11459884-11459903 | MS.gene07910:intron | 20.0% |
| ! | AATTACAGGAATAAGAGATT+AGG | - | chr6.4:11461032-11461051 | MS.gene07910:intron | 25.0% |
| ! | ACTCTTCTACCATAAAAATT+GGG | + | chr6.4:11462841-11462860 | None:intergenic | 25.0% |
| ! | ATAACCATAGGAAATGTAAA+AGG | + | chr6.4:11461791-11461810 | None:intergenic | 25.0% |
| ! | ATGTAAAGTGATTTATGTGT+TGG | - | chr6.4:11459447-11459466 | MS.gene07910:intron | 25.0% |
| ! | ATGTTCTAACAATCAAATTG+TGG | + | chr6.4:11460932-11460951 | None:intergenic | 25.0% |
| ! | CATAAACAATGATTAAAGCA+TGG | + | chr6.4:11462634-11462653 | None:intergenic | 25.0% |
| ! | GAGTCAAATATGTTAACTTT+GGG | - | chr6.4:11461607-11461626 | MS.gene07910:intron | 25.0% |
| ! | GATTGATTAAACATAACCAT+AGG | + | chr6.4:11461803-11461822 | None:intergenic | 25.0% |
| ! | TCTATAACTTTCATTTCAGT+TGG | + | chr6.4:11461444-11461463 | None:intergenic | 25.0% |
| ! | TGAGTCAAATATGTTAACTT+TGG | - | chr6.4:11461606-11461625 | MS.gene07910:intron | 25.0% |
| ! | TTTACAACTTATAGCATGTT+TGG | + | chr6.4:11461266-11461285 | None:intergenic | 25.0% |
| ! | TTTAGAAACAAAAGTTTCCA+AGG | - | chr6.4:11461163-11461182 | MS.gene07910:intron | 25.0% |
| !! | ATAGATGCCTTTTAGATTTA+TGG | - | chr6.4:11461345-11461364 | MS.gene07910:intron | 25.0% |
| !! | ATCTTTTCATCTAATCCAAT+TGG | + | chr6.4:11461682-11461701 | None:intergenic | 25.0% |
| !! | ATGTAACATTCAAGTTCATA+AGG | + | chr6.4:11462424-11462443 | None:intergenic | 25.0% |
| !! | CCAAGAAAAATTGAACTTTT+AGG | + | chr6.4:11462012-11462031 | None:intergenic | 25.0% |
| !! | CCTAAAAGTTCAATTTTTCT+TGG | - | chr6.4:11462009-11462028 | MS.gene07910:intron | 25.0% |
| !! | GTAAGATCTTTTCAATATGA+AGG | - | chr6.4:11460952-11460971 | MS.gene07910:intron | 25.0% |
| !! | TTTGAGATTACGAATCAAAT+TGG | + | chr6.4:11460123-11460142 | None:intergenic | 25.0% |
| !! | TTTTCCTGTTATTCATCAAA+AGG | - | chr6.4:11461831-11461850 | MS.gene07910:intron | 25.0% |
| !!! | AGAATTGATTCTGACATTTT+TGG | - | chr6.4:11459348-11459367 | MS.gene07910:intron | 25.0% |
| !!! | ATTCATCTTTTTGAGTGAAA+GGG | - | chr6.4:11460533-11460552 | MS.gene07910:intron | 25.0% |
| !!! | CTTTATTTGTTGTTTGTGTA+TGG | - | chr6.4:11460748-11460767 | MS.gene07910:intron | 25.0% |
| !!! | TGTTATTTGTGATTTTGAGT+AGG | - | chr6.4:11460590-11460609 | MS.gene07910:intron | 25.0% |
| !!! | TTCTGTTTTGTTAGGTAATT+AGG | - | chr6.4:11460487-11460506 | MS.gene07910:CDS | 25.0% |
| AACAAGTCAACAATCACAAA+AGG | + | chr6.4:11460816-11460835 | None:intergenic | 30.0% | |
| AACAATGATTAAAGCATGGA+AGG | + | chr6.4:11462630-11462649 | None:intergenic | 30.0% | |
| AACTTCCATTTCATTCAAAC+TGG | - | chr6.4:11458975-11458994 | MS.gene07910:CDS | 30.0% | |
| AAGAACCAAAACAGGATTAA+AGG | + | chr6.4:11462938-11462957 | None:intergenic | 30.0% | |
| AATCAAACAAGAACCAAAAC+AGG | + | chr6.4:11462946-11462965 | None:intergenic | 30.0% | |
| AATGTTACATCAACTAAGAG+AGG | - | chr6.4:11462434-11462453 | MS.gene07910:intron | 30.0% | |
| AGGAATTAATTGACGTATGT+GGG | - | chr6.4:11460610-11460629 | MS.gene07910:intron | 30.0% | |
| AGTGAAATCTCTTCTTTACA+AGG | - | chr6.4:11462872-11462891 | MS.gene07910:CDS | 30.0% | |
| ATATGGTATGTTGCGTTATA+TGG | - | chr6.4:11462486-11462505 | MS.gene07910:intron | 30.0% | |
| ATCTAACACGTATGTGAAAT+CGG | - | chr6.4:11461937-11461956 | MS.gene07910:intron | 30.0% | |
| ATGGAATCAATTCTACTCAA+CGG | + | chr6.4:11459377-11459396 | None:intergenic | 30.0% | |
| CTTAACAACACTATTGACAT+AGG | + | chr6.4:11461862-11461881 | None:intergenic | 30.0% | |
| GAAGTGTATGATACTTTCTT+AGG | + | chr6.4:11460255-11460274 | None:intergenic | 30.0% | |
| GACTCTTCTACCATAAAAAT+TGG | + | chr6.4:11462842-11462861 | None:intergenic | 30.0% | |
| GCAATCACCATAAATCTAAA+AGG | + | chr6.4:11461355-11461374 | None:intergenic | 30.0% | |
| GTAGTATGATCATAAAACGT+AGG | + | chr6.4:11462139-11462158 | None:intergenic | 30.0% | |
| TAGGAATTAATTGACGTATG+TGG | - | chr6.4:11460609-11460628 | MS.gene07910:intron | 30.0% | |
| TAGGTTAAAAGACCAGTTTA+AGG | + | chr6.4:11462054-11462073 | None:intergenic | 30.0% | |
| TATGGTATGTTGCGTTATAT+GGG | - | chr6.4:11462487-11462506 | MS.gene07910:intron | 30.0% | |
| TCAAGATCAAAATCCTACTT+AGG | + | chr6.4:11462178-11462197 | None:intergenic | 30.0% | |
| TCTATCAAAATCAACTCTCT+TGG | + | chr6.4:11459491-11459510 | None:intergenic | 30.0% | |
| TTGAATGAAATGGAAGTTTG+TGG | + | chr6.4:11458973-11458992 | None:intergenic | 30.0% | |
| TTTAGATTTATGGTGATTGC+TGG | - | chr6.4:11461355-11461374 | MS.gene07910:intron | 30.0% | |
| TTTCTAAACACTCTTGTTCT+GGG | + | chr6.4:11461151-11461170 | None:intergenic | 30.0% | |
| TTTGTAAAAATGACCTGAGT+TGG | + | chr6.4:11463157-11463176 | None:intergenic | 30.0% | |
| ! | CATAGGATTCCTAATTTTGT+TGG | - | chr6.4:11459216-11459235 | MS.gene07910:intron | 30.0% |
| ! | GGTTAAAAGTGATTTGTGTT+TGG | - | chr6.4:11459534-11459553 | MS.gene07910:intron | 30.0% |
| ! | TGATCCTTTTGATGAATAAC+AGG | + | chr6.4:11461838-11461857 | None:intergenic | 30.0% |
| ! | TTTTTATGGTAGAAGAGTCT+AGG | - | chr6.4:11462843-11462862 | MS.gene07910:CDS | 30.0% |
| !!! | CGATTTTTTTCTTCTCGTTT+TGG | - | chr6.4:11461491-11461510 | MS.gene07910:intron | 30.0% |
| !!! | GATTCATCTTTTTGAGTGAA+AGG | - | chr6.4:11460532-11460551 | MS.gene07910:intron | 30.0% |
| AAAACAGGATTAAAGGACAG+GGG | + | chr6.4:11462931-11462950 | None:intergenic | 35.0% | |
| AAAGAGGATATGGGATTTGA+TGG | - | chr6.4:11459155-11459174 | MS.gene07910:intron | 35.0% | |
| AAATCCTACTTAGGATCATG+AGG | + | chr6.4:11462169-11462188 | None:intergenic | 35.0% | |
| AAGCGAATCACTCAATTTAG+AGG | - | chr6.4:11461118-11461137 | MS.gene07910:intron | 35.0% | |
| AATTGCTAAGATTGCGAGAT+TGG | - | chr6.4:11461971-11461990 | MS.gene07910:intron | 35.0% | |
| AATTGTTAACTCCTCAACCA+CGG | - | chr6.4:11461557-11461576 | MS.gene07910:intron | 35.0% | |
| ACGATCAATATTTGTGCAGA+TGG | - | chr6.4:11461529-11461548 | MS.gene07910:intron | 35.0% | |
| AGTTTCTTCCTTCATACTGT+TGG | - | chr6.4:11460229-11460248 | MS.gene07910:intron | 35.0% | |
| ATAAAACACCAACAGAAACC+TGG | + | chr6.4:11460318-11460337 | None:intergenic | 35.0% | |
| ATCAAGAGTAGACACTTTAG+AGG | + | chr6.4:11461060-11461079 | None:intergenic | 35.0% | |
| CAAAACAGGATTAAAGGACA+GGG | + | chr6.4:11462932-11462951 | None:intergenic | 35.0% | |
| CAGCAACACAAAAGAATTAC+AGG | - | chr6.4:11461018-11461037 | MS.gene07910:intron | 35.0% | |
| CCTATGCTATATGTTTGCTT+CGG | - | chr6.4:11460510-11460529 | MS.gene07910:CDS | 35.0% | |
| GAAGTGGAATCGAACATATA+CGG | - | chr6.4:11459720-11459739 | MS.gene07910:intron | 35.0% | |
| GAAGTTCTGTAGCGTATTTA+AGG | + | chr6.4:11460095-11460114 | None:intergenic | 35.0% | |
| GATTCTTGAAAAGATAGGCA+TGG | + | chr6.4:11460056-11460075 | None:intergenic | 35.0% | |
| GCTTGTGCGATATTAGATAT+TGG | + | chr6.4:11462284-11462303 | None:intergenic | 35.0% | |
| GGAAATAGCAGAAGAGTAAA+AGG | - | chr6.4:11460888-11460907 | MS.gene07910:intron | 35.0% | |
| GGATTTGCAGAACTTGAATA+TGG | - | chr6.4:11462469-11462488 | MS.gene07910:intron | 35.0% | |
| GGTGATTAGAAAGAGGATAT+GGG | - | chr6.4:11459146-11459165 | MS.gene07910:intron | 35.0% | |
| GGTGTACAAATGATATCTAC+TGG | + | chr6.4:11463136-11463155 | None:intergenic | 35.0% | |
| GTGAATGATGTTCAGTTAAC+CGG | + | chr6.4:11460178-11460197 | None:intergenic | 35.0% | |
| GTTTCTAAACACTCTTGTTC+TGG | + | chr6.4:11461152-11461171 | None:intergenic | 35.0% | |
| TACTCATTCTTATGCAAGAC+CGG | - | chr6.4:11462091-11462110 | MS.gene07910:intron | 35.0% | |
| TATCATTTGTACACCAACTC+AGG | - | chr6.4:11463141-11463160 | MS.gene07910:CDS | 35.0% | |
| TGATATCTACTGGTACATCA+TGG | + | chr6.4:11463126-11463145 | None:intergenic | 35.0% | |
| TTAGGAATCCTATGATGAAC+AGG | + | chr6.4:11459210-11459229 | None:intergenic | 35.0% | |
| TTCTACCATAAAAATTGGGC+TGG | + | chr6.4:11462837-11462856 | None:intergenic | 35.0% | |
| ! | AACGCCTTTTACATTTCCTA+TGG | - | chr6.4:11461784-11461803 | MS.gene07910:intron | 35.0% |
| ! | GTTGAGTAGAATTGATTCCA+TGG | - | chr6.4:11459376-11459395 | MS.gene07910:intron | 35.0% |
| ! | GTTGTTACCTCAGGTAATTT+TGG | - | chr6.4:11462532-11462551 | MS.gene07910:intron | 35.0% |
| ! | TGGATTAACAGCTTTTCAAC+TGG | + | chr6.4:11463106-11463125 | None:intergenic | 35.0% |
| ! | TGTTGTTTACAGAAAGTGAC+TGG | - | chr6.4:11462810-11462829 | MS.gene07910:intron | 35.0% |
| !! | AATGGAAGTTTGTGGTTTTG+TGG | + | chr6.4:11458965-11458984 | None:intergenic | 35.0% |
| !! | AGAAATCTGACTTGTTTCTG+AGG | + | chr6.4:11460705-11460724 | None:intergenic | 35.0% |
| !! | AGAGAAGCACCAACAAAATT+AGG | + | chr6.4:11459228-11459247 | None:intergenic | 35.0% |
| !! | AGCATGTTTGGAATTGCTTT+TGG | + | chr6.4:11461254-11461273 | None:intergenic | 35.0% |
| !! | ATGTTTGGAATTGCTTTTGG+AGG | + | chr6.4:11461251-11461270 | None:intergenic | 35.0% |
| !! | GAAGGTATCTATGACTATGA+TGG | - | chr6.4:11460970-11460989 | MS.gene07910:intron | 35.0% |
| !! | TGTCACTGTTCTGTTTTGTT+AGG | - | chr6.4:11460479-11460498 | MS.gene07910:CDS | 35.0% |
| !!! | ACAACTATGTTACTTTTGCC+TGG | + | chr6.4:11460453-11460472 | None:intergenic | 35.0% |
| !!! | TGGGTTTTTTATGCAGATGA+GGG | - | chr6.4:11460629-11460648 | MS.gene07910:intron | 35.0% |
| AAATCCAATCTCTGTCACCA+TGG | + | chr6.4:11459396-11459415 | None:intergenic | 40.0% | |
| AATTCTAGTCTCTCGAGAAG+TGG | + | chr6.4:11459334-11459353 | None:intergenic | 40.0% | |
| AGGATATGGGATTTGATGGA+AGG | - | chr6.4:11459159-11459178 | MS.gene07910:intron | 40.0% | |
| ATCACCCATTTCCAAGCTTT+CGG | + | chr6.4:11459132-11459151 | None:intergenic | 40.0% | |
| ATCACTCAATTTAGAGGAGC+CGG | - | chr6.4:11461124-11461143 | MS.gene07910:intron | 40.0% | |
| ATCCTAGACCTGTTCATCAT+AGG | - | chr6.4:11459199-11459218 | MS.gene07910:intron | 40.0% | |
| ATCCTATGATGAACAGGTCT+AGG | + | chr6.4:11459204-11459223 | None:intergenic | 40.0% | |
| ATGATCCGAAAGCTTGGAAA+TGG | - | chr6.4:11459124-11459143 | MS.gene07910:intron | 40.0% | |
| CAACAAAGCTTCCTTCAATG+AGG | - | chr6.4:11459017-11459036 | MS.gene07910:intron | 40.0% | |
| CCAAAACAGGATTAAAGGAC+AGG | + | chr6.4:11462933-11462952 | None:intergenic | 40.0% | |
| CCGAAGCAAACATATAGCAT+AGG | + | chr6.4:11460513-11460532 | None:intergenic | 40.0% | |
| CGCTACAAATGCTCTAATCA+CGG | + | chr6.4:11460401-11460420 | None:intergenic | 40.0% | |
| GAAAGGGTGAAAGTTTGGTA+GGG | - | chr6.4:11460549-11460568 | MS.gene07910:intron | 40.0% | |
| GACTTGATTCTACTTGAAGC+TGG | + | chr6.4:11459634-11459653 | None:intergenic | 40.0% | |
| GCAAGAACCAAAATTACCTG+AGG | + | chr6.4:11462542-11462561 | None:intergenic | 40.0% | |
| GCTGAACACATTAGAATGAC+TGG | + | chr6.4:11460277-11460296 | None:intergenic | 40.0% | |
| GGAAATGGGTGATTAGAAAG+AGG | - | chr6.4:11459139-11459158 | MS.gene07910:intron | 40.0% | |
| GGATATGGGATTTGATGGAA+GGG | - | chr6.4:11459160-11459179 | MS.gene07910:intron | 40.0% | |
| GGCTTCCAGTTTGAATGAAA+TGG | + | chr6.4:11458983-11459002 | None:intergenic | 40.0% | |
| GGGTGATTAGAAAGAGGATA+TGG | - | chr6.4:11459145-11459164 | MS.gene07910:intron | 40.0% | |
| GTCAGATTTCTCACTCTTTC+AGG | - | chr6.4:11460714-11460733 | MS.gene07910:intron | 40.0% | |
| GTTAACTTTGGGTACCATCA+AGG | - | chr6.4:11461618-11461637 | MS.gene07910:intron | 40.0% | |
| TAAAGAGGAGAGAGAGTGAA+TGG | + | chr6.4:11458931-11458950 | None:intergenic | 40.0% | |
| TAAAGGACAGGGGAAGATAT+CGG | + | chr6.4:11462921-11462940 | None:intergenic | 40.0% | |
| TAAGAGAGGATTGAAGTGCA+GGG | - | chr6.4:11462448-11462467 | MS.gene07910:intron | 40.0% | |
| TACACCTCCAGAATCAATTC+TGG | - | chr6.4:11459689-11459708 | MS.gene07910:intron | 40.0% | |
| TACTTAGGATCATGAGGAAG+AGG | + | chr6.4:11462163-11462182 | None:intergenic | 40.0% | |
| TCAACACTAGTTGTTACCTC+AGG | - | chr6.4:11462523-11462542 | MS.gene07910:intron | 40.0% | |
| TCAGAGAACTCTTCATCTTG+AGG | + | chr6.4:11461213-11461232 | None:intergenic | 40.0% | |
| TCCAATTGGTCGACCATATT+TGG | + | chr6.4:11461668-11461687 | None:intergenic | 40.0% | |
| TCCTGTTAGTTATGAAAGCC+AGG | - | chr6.4:11460432-11460451 | MS.gene07910:CDS | 40.0% | |
| TCTTCCTCATGATCCTAAGT+AGG | - | chr6.4:11462162-11462181 | MS.gene07910:intron | 40.0% | |
| TGAAAGGGTGAAAGTTTGGT+AGG | - | chr6.4:11460548-11460567 | MS.gene07910:intron | 40.0% | |
| TGAGTGAAAGGGTGAAAGTT+TGG | - | chr6.4:11460544-11460563 | MS.gene07910:intron | 40.0% | |
| TGATCCGAAAGCTTGGAAAT+GGG | - | chr6.4:11459125-11459144 | MS.gene07910:intron | 40.0% | |
| TGGTTGAACATATTCGACGT+CGG | - | chr6.4:11462774-11462793 | MS.gene07910:intron | 40.0% | |
| TTCTTAGGCCAACAGTATGA+AGG | + | chr6.4:11460240-11460259 | None:intergenic | 40.0% | |
| TTTACGAACTTACAGCCACT+GGG | - | chr6.4:11461912-11461931 | MS.gene07910:intron | 40.0% | |
| TTTCCTTAGCCATTCCTCAA+AGG | - | chr6.4:11462572-11462591 | MS.gene07910:intron | 40.0% | |
| TTTGGAGGATGCTGAACATT+TGG | + | chr6.4:11461236-11461255 | None:intergenic | 40.0% | |
| ! | AATTCTGGTTGGTCAAGAAG+TGG | - | chr6.4:11459704-11459723 | MS.gene07910:intron | 40.0% |
| ! | ACATCTTTGAGAAGCCTTTG+AGG | + | chr6.4:11462589-11462608 | None:intergenic | 40.0% |
| ! | CCTGTCCTTTAATCCTGTTT+TGG | - | chr6.4:11462930-11462949 | MS.gene07910:CDS | 40.0% |
| ! | CGCTAATCGATTCCTTAAAC+TGG | - | chr6.4:11462039-11462058 | MS.gene07910:intron | 40.0% |
| ! | CGTGATTAGAGCATTTGTAG+CGG | - | chr6.4:11460399-11460418 | MS.gene07910:CDS | 40.0% |
| ! | GGGAAGATATCGGAACATTT+TGG | + | chr6.4:11462911-11462930 | None:intergenic | 40.0% |
| ! | GTAACAAGCATCGTAAGATC+CGG | + | chr6.4:11462113-11462132 | None:intergenic | 40.0% |
| ! | TGACCAACCAGAATTGATTC+TGG | + | chr6.4:11459699-11459718 | None:intergenic | 40.0% |
| ! | TTTGAGAAGCCTTTGAGGAA+TGG | + | chr6.4:11462584-11462603 | None:intergenic | 40.0% |
| ! | TTTGTGTATGGTGTTGAGCA+GGG | - | chr6.4:11460760-11460779 | MS.gene07910:intron | 40.0% |
| ! | TTTTACGAACTTACAGCCAC+TGG | - | chr6.4:11461911-11461930 | MS.gene07910:intron | 40.0% |
| !! | ACTTGTTTCTGAGGAGAATC+TGG | + | chr6.4:11460696-11460715 | None:intergenic | 40.0% |
| !! | CTCACTCTTTCAGGTTAGAT+AGG | - | chr6.4:11460723-11460742 | MS.gene07910:intron | 40.0% |
| !!! | GTGGGTTTTTTATGCAGATG+AGG | - | chr6.4:11460628-11460647 | MS.gene07910:intron | 40.0% |
| AAGGAAGCCTGTACTTCTGT+TGG | - | chr6.4:11461637-11461656 | MS.gene07910:intron | 45.0% | |
| ACAGGTGCTCGATTAGGAAA+GGG | - | chr6.4:11461748-11461767 | MS.gene07910:intron | 45.0% | |
| AGGAAGCCTGTACTTCTGTT+GGG | - | chr6.4:11461638-11461657 | MS.gene07910:intron | 45.0% | |
| AGGGTCTAGTCTAATACAGC+AGG | + | chr6.4:11461383-11461402 | None:intergenic | 45.0% | |
| CCTCCAGAATCAATTCTGGT+TGG | - | chr6.4:11459693-11459712 | MS.gene07910:intron | 45.0% | |
| CGTGAAACAAGACTCAGTGT+CGG | + | chr6.4:11462310-11462329 | None:intergenic | 45.0% | |
| CTAAGAGAGGATTGAAGTGC+AGG | - | chr6.4:11462447-11462466 | MS.gene07910:intron | 45.0% | |
| CTGGAATGTCATCCACCAAT+TGG | + | chr6.4:11463087-11463106 | None:intergenic | 45.0% | |
| CTGGTTAGAAAAGTCTGCCT+CGG | - | chr6.4:11462215-11462234 | MS.gene07910:intron | 45.0% | |
| GAGAACATTGTCTGTGATCC+TGG | - | chr6.4:11462196-11462215 | MS.gene07910:intron | 45.0% | |
| GATTCCATGGTGACAGAGAT+TGG | - | chr6.4:11459389-11459408 | MS.gene07910:intron | 45.0% | |
| GCCAAATATGGTCGACCAAT+TGG | - | chr6.4:11461664-11461683 | MS.gene07910:intron | 45.0% | |
| TACAGTGCATGACTGCCAAT+TGG | - | chr6.4:11463069-11463088 | MS.gene07910:CDS | 45.0% | |
| TCTGTTGGGGTTGCCAAATA+TGG | - | chr6.4:11461652-11461671 | MS.gene07910:intron | 45.0% | |
| TGCTTCTCTTGCTGCTGATA+AGG | - | chr6.4:11459239-11459258 | MS.gene07910:intron | 45.0% | |
| ! | AAACACTCTTGTTCTGGGTC+CGG | + | chr6.4:11461146-11461165 | None:intergenic | 45.0% |
| ! | AAGCCTTTGAGGAATGGCTA+AGG | + | chr6.4:11462578-11462597 | None:intergenic | 45.0% |
| ! | ACGGATTGCGCTTAACAATC+TGG | + | chr6.4:11460382-11460401 | None:intergenic | 45.0% |
| ! | AGAAGTACAGGCTTCCTTGA+TGG | + | chr6.4:11461635-11461654 | None:intergenic | 45.0% |
| ! | CCAACCAGAATTGATTCTGG+AGG | + | chr6.4:11459696-11459715 | None:intergenic | 45.0% |
| ! | CTGGTCCAGCCCAATTTTTA+TGG | - | chr6.4:11462829-11462848 | MS.gene07910:intron | 45.0% |
| ! | GCCTGGCTTTCATAACTAAC+AGG | + | chr6.4:11460436-11460455 | None:intergenic | 45.0% |
| ! | GTTTGTGTATGGTGTTGAGC+AGG | - | chr6.4:11460759-11460778 | MS.gene07910:intron | 45.0% |
| !! | AGCTTTGTTGTTGCTGCTGT+TGG | + | chr6.4:11459007-11459026 | None:intergenic | 45.0% |
| !! | CGACACTGAGTCTTGTTTCA+CGG | - | chr6.4:11462308-11462327 | MS.gene07910:intron | 45.0% |
| !! | TGAAGTATTGACACCAGACC+AGG | - | chr6.4:11460297-11460316 | MS.gene07910:intron | 45.0% |
| !! | TTTGTTGTTGCTGCTGTTGG+TGG | + | chr6.4:11459004-11459023 | None:intergenic | 45.0% |
| !!! | ATATGTAAAAATTATTATTT+TGG | - | chr6.4:11462754-11462773 | MS.gene07910:intron | 5.0% |
| AAAAAACCTGTCCTCAGCCG+TGG | + | chr6.4:11461577-11461596 | None:intergenic | 50.0% | |
| ACACCAACAGAAACCTGGTC+TGG | + | chr6.4:11460313-11460332 | None:intergenic | 50.0% | |
| ACACCAGACCAGGTTTCTGT+TGG | - | chr6.4:11460307-11460326 | MS.gene07910:intron | 50.0% | |
| AGTGCATGACTGCCAATTGG+TGG | - | chr6.4:11463072-11463091 | MS.gene07910:CDS | 50.0% | |
| ATACGTGTTAGATCGCCCAG+TGG | + | chr6.4:11461930-11461949 | None:intergenic | 50.0% | |
| CACAGGTGCTCGATTAGGAA+AGG | - | chr6.4:11461747-11461766 | MS.gene07910:intron | 50.0% | |
| CCTAATCGAGCACCTGTGTT+CGG | + | chr6.4:11461745-11461764 | None:intergenic | 50.0% | |
| CCTTCACACATTGTGCATCG+CGG | + | chr6.4:11460668-11460687 | None:intergenic | 50.0% | |
| CTAATCGAGCACCTGTGTTC+GGG | + | chr6.4:11461744-11461763 | None:intergenic | 50.0% | |
| CTCGAAAGCAGCCTCATTGA+AGG | + | chr6.4:11459031-11459050 | None:intergenic | 50.0% | |
| GCGCTTAACAATCTGGACTC+TGG | + | chr6.4:11460375-11460394 | None:intergenic | 50.0% | |
| GGAAGCCTGTACTTCTGTTG+GGG | - | chr6.4:11461639-11461658 | MS.gene07910:intron | 50.0% | |
| GGAGGAGAAATCTTCGATGC+AGG | - | chr6.4:11459101-11459120 | MS.gene07910:intron | 50.0% | |
| GTGAAAGTTTGGTAGGGCGT+GGG | - | chr6.4:11460555-11460574 | MS.gene07910:intron | 50.0% | |
| TGCAGGATGATCCGAAAGCT+TGG | - | chr6.4:11459118-11459137 | MS.gene07910:intron | 50.0% | |
| TGCTCGATTAGGAAAGGGAG+AGG | - | chr6.4:11461753-11461772 | MS.gene07910:intron | 50.0% | |
| TGTAAGTTCTGCACTGTCGC+CGG | - | chr6.4:11460156-11460175 | MS.gene07910:intron | 50.0% | |
| ! | CGAGGCAGACTTTTCTAACC+AGG | + | chr6.4:11462217-11462236 | None:intergenic | 50.0% |
| ! | CTTCAATGAGGCTGCTTTCG+AGG | - | chr6.4:11459029-11459048 | MS.gene07910:intron | 50.0% |
| ! | TGTATGGTGTTGAGCAGGGA+GGG | - | chr6.4:11460764-11460783 | MS.gene07910:intron | 50.0% |
| !!! | GTGGTTTTGTGGAGAGAGAG+CGG | + | chr6.4:11458954-11458973 | None:intergenic | 50.0% |
| AAGTTTGGTAGGGCGTGGGA+TGG | - | chr6.4:11460559-11460578 | MS.gene07910:intron | 55.0% | |
| AGAAGCTCGTCGAGCAATGG+CGG | - | chr6.4:11459074-11459093 | MS.gene07910:intron | 55.0% | |
| AGTTTGGTAGGGCGTGGGAT+GGG | - | chr6.4:11460560-11460579 | MS.gene07910:intron | 55.0% | |
| CCGAACACAGGTGCTCGATT+AGG | - | chr6.4:11461742-11461761 | MS.gene07910:intron | 55.0% | |
| CCGCGATGCACAATGTGTGA+AGG | - | chr6.4:11460665-11460684 | MS.gene07910:intron | 55.0% | |
| GACAGCTCAAGCTGAGGCAA+AGG | - | chr6.4:11461187-11461206 | MS.gene07910:intron | 55.0% | |
| GGTGAAAGTTTGGTAGGGCG+TGG | - | chr6.4:11460554-11460573 | MS.gene07910:intron | 55.0% | |
| GTGGAGAGAGAGCGGTAAAG+AGG | + | chr6.4:11458946-11458965 | None:intergenic | 55.0% | |
| TAACTCCTCAACCACGGCTG+AGG | - | chr6.4:11461563-11461582 | MS.gene07910:intron | 55.0% | |
| ! | CAATGAGGCTGCTTTCGAGG+CGG | - | chr6.4:11459032-11459051 | MS.gene07910:intron | 55.0% |
| ! | GGCAACCCCAACAGAAGTAC+AGG | + | chr6.4:11461647-11461666 | None:intergenic | 55.0% |
| ! | GTATGGTGTTGAGCAGGGAG+GGG | - | chr6.4:11460765-11460784 | MS.gene07910:intron | 55.0% |
| ! | GTGTATGGTGTTGAGCAGGG+AGG | - | chr6.4:11460763-11460782 | MS.gene07910:intron | 55.0% |
| ! | TATGGTGTTGAGCAGGGAGG+GGG | - | chr6.4:11460766-11460785 | MS.gene07910:intron | 55.0% |
| CAAGGCGACAGCTCAAGCTG+AGG | - | chr6.4:11461181-11461200 | MS.gene07910:intron | 60.0% | |
| CGCAGAAGCTCGTCGAGCAA+TGG | - | chr6.4:11459071-11459090 | MS.gene07910:intron | 60.0% | |
| CTCAGCTTGAGCTGTCGCCT+TGG | + | chr6.4:11461183-11461202 | None:intergenic | 60.0% | |
| GTCGCTGTTGACCCGAACAC+AGG | - | chr6.4:11461730-11461749 | MS.gene07910:intron | 60.0% | |
| TCGACGAGCTTCTGCGTCGA+GGG | + | chr6.4:11459067-11459086 | None:intergenic | 60.0% | |
| TCGAGCAATGGCGGTTGAGG+AGG | - | chr6.4:11459083-11459102 | MS.gene07910:intron | 60.0% | |
| TCGTCGAGCAATGGCGGTTG+AGG | - | chr6.4:11459080-11459099 | MS.gene07910:intron | 60.0% | |
| CCTCAACCACGGCTGAGGAC+AGG | - | chr6.4:11461568-11461587 | MS.gene07910:intron | 65.0% | |
| CCTGTCCTCAGCCGTGGTTG+AGG | + | chr6.4:11461571-11461590 | None:intergenic | 65.0% | |
| CTCGACGAGCTTCTGCGTCG+AGG | + | chr6.4:11459068-11459087 | None:intergenic | 65.0% | |
| GCAGGTGAAACAGCGTGCCG+AGG | + | chr6.4:11462235-11462254 | None:intergenic | 65.0% | |
| GTGTTGAGCAGGGAGGGGGA+AGG | - | chr6.4:11460770-11460789 | MS.gene07910:intron | 65.0% | |
| ! | AGGCTGCTTTCGAGGCGGAG+CGG | - | chr6.4:11459037-11459056 | MS.gene07910:intron | 65.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr6.4 | gene | 11458898 | 11463199 | 11458898 | ID=MS.gene07910 |
| chr6.4 | mRNA | 11458898 | 11463199 | 11458898 | ID=MS.gene07910.t1;Parent=MS.gene07910 |
| chr6.4 | exon | 11462837 | 11463199 | 11462837 | ID=MS.gene07910.t1.exon1;Parent=MS.gene07910.t1 |
| chr6.4 | CDS | 11462837 | 11463199 | 11462837 | ID=cds.MS.gene07910.t1;Parent=MS.gene07910.t1 |
| chr6.4 | exon | 11461362 | 11461452 | 11461362 | ID=MS.gene07910.t1.exon2;Parent=MS.gene07910.t1 |
| chr6.4 | CDS | 11461362 | 11461452 | 11461362 | ID=cds.MS.gene07910.t1;Parent=MS.gene07910.t1 |
| chr6.4 | exon | 11460323 | 11460549 | 11460323 | ID=MS.gene07910.t1.exon3;Parent=MS.gene07910.t1 |
| chr6.4 | CDS | 11460323 | 11460549 | 11460323 | ID=cds.MS.gene07910.t1;Parent=MS.gene07910.t1 |
| chr6.4 | exon | 11459553 | 11459628 | 11459553 | ID=MS.gene07910.t1.exon4;Parent=MS.gene07910.t1 |
| chr6.4 | CDS | 11459553 | 11459628 | 11459553 | ID=cds.MS.gene07910.t1;Parent=MS.gene07910.t1 |
| chr6.4 | exon | 11458898 | 11459023 | 11458898 | ID=MS.gene07910.t1.exon5;Parent=MS.gene07910.t1 |
| chr6.4 | CDS | 11458898 | 11459023 | 11458898 | ID=cds.MS.gene07910.t1;Parent=MS.gene07910.t1 |
| Gene Sequence |
| Protein sequence |
