Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene25125.t1 | Q4VYC8.1 | 96.2 | 554 | 21 | 0 | 1 | 554 | 1 | 554 | 1.90E-267 | 931.4 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene25125.t1 | Q4VYC8 | 96.2 | 554 | 21 | 0 | 1 | 554 | 1 | 554 | 4.7e-270 | 931.4 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene25125.t1 | A0A396GDF6 | 96.2 | 554 | 21 | 0 | 1 | 554 | 53 | 606 | 1.4e-267 | 931.4 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|---|---|
| MS.gene25125.t1 | TF | GRAS |
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| MS.gene049171 | MS.gene25125 | -0.839528 | 1.50E-57 | -1.69E-46 |
| MS.gene049217 | MS.gene25125 | -0.801945 | 7.09E-49 | -1.69E-46 |
| MS.gene049259 | MS.gene25125 | 0.819436 | 1.16E-52 | -1.69E-46 |
| MS.gene049281 | MS.gene25125 | 0.825442 | 4.68E-54 | -1.69E-46 |
| MS.gene049285 | MS.gene25125 | -0.826683 | 2.37E-54 | -1.69E-46 |
| MS.gene049320 | MS.gene25125 | -0.853185 | 2.82E-61 | -1.69E-46 |
| MS.gene049483 | MS.gene25125 | 0.818228 | 2.19E-52 | -1.69E-46 |
| MS.gene049549 | MS.gene25125 | 0.800308 | 1.53E-48 | -1.69E-46 |
| MS.gene049611 | MS.gene25125 | 0.800829 | 1.20E-48 | -1.69E-46 |
| MS.gene049633 | MS.gene25125 | -0.802708 | 4.93E-49 | -1.69E-46 |
| MS.gene049634 | MS.gene25125 | 0.803851 | 2.86E-49 | -1.69E-46 |
| MS.gene05010 | MS.gene25125 | -0.819923 | 9.00E-53 | -1.69E-46 |
| MS.gene050163 | MS.gene25125 | -0.82418 | 9.28E-54 | -1.69E-46 |
| MS.gene050165 | MS.gene25125 | -0.825957 | 3.53E-54 | -1.69E-46 |
| MS.gene050173 | MS.gene25125 | 0.805529 | 1.28E-49 | -1.69E-46 |
| MS.gene050323 | MS.gene25125 | -0.807338 | 5.31E-50 | -1.69E-46 |
| MS.gene050333 | MS.gene25125 | -0.805018 | 1.63E-49 | -1.69E-46 |
| MS.gene050363 | MS.gene25125 | 0.802696 | 4.96E-49 | -1.69E-46 |
| MS.gene050381 | MS.gene25125 | 0.84381 | 1.11E-58 | -1.69E-46 |
| MS.gene050496 | MS.gene25125 | -0.808994 | 2.36E-50 | -1.69E-46 |
| MS.gene050504 | MS.gene25125 | -0.865416 | 6.00E-65 | -1.69E-46 |
| MS.gene050577 | MS.gene25125 | -0.801018 | 1.10E-48 | -1.69E-46 |
| MS.gene050612 | MS.gene25125 | -0.856347 | 3.42E-62 | -1.69E-46 |
| MS.gene050647 | MS.gene25125 | 0.830066 | 3.62E-55 | -1.69E-46 |
| MS.gene050675 | MS.gene25125 | -0.839341 | 1.68E-57 | -1.69E-46 |
| MS.gene050699 | MS.gene25125 | -0.815807 | 7.65E-52 | -1.69E-46 |
| MS.gene05079 | MS.gene25125 | 0.810703 | 1.01E-50 | -1.69E-46 |
| MS.gene050868 | MS.gene25125 | -0.815692 | 8.12E-52 | -1.69E-46 |
| MS.gene050871 | MS.gene25125 | -0.815828 | 7.57E-52 | -1.69E-46 |
| MS.gene050883 | MS.gene25125 | 0.845175 | 4.79E-59 | -1.69E-46 |
| MS.gene050986 | MS.gene25125 | -0.846482 | 2.11E-59 | -1.69E-46 |
| MS.gene051044 | MS.gene25125 | 0.8239 | 1.08E-53 | -1.69E-46 |
| MS.gene05104 | MS.gene25125 | 0.802127 | 6.50E-49 | -1.69E-46 |
| MS.gene051127 | MS.gene25125 | 0.964192 | 5.10E-123 | -1.69E-46 |
| MS.gene051138 | MS.gene25125 | 0.856287 | 3.56E-62 | -1.69E-46 |
| MS.gene051268 | MS.gene25125 | -0.803748 | 3.01E-49 | -1.69E-46 |
| MS.gene05141 | MS.gene25125 | 0.800266 | 1.56E-48 | -1.69E-46 |
| MS.gene051551 | MS.gene25125 | -0.809714 | 1.65E-50 | -1.69E-46 |
| MS.gene051651 | MS.gene25125 | 0.804309 | 2.30E-49 | -1.69E-46 |
| MS.gene051810 | MS.gene25125 | -0.831625 | 1.50E-55 | -1.69E-46 |
| MS.gene051946 | MS.gene25125 | 0.831552 | 1.56E-55 | -1.69E-46 |
| MS.gene052164 | MS.gene25125 | -0.812046 | 5.16E-51 | -1.69E-46 |
| MS.gene052482 | MS.gene25125 | -0.804328 | 2.28E-49 | -1.69E-46 |
| MS.gene052486 | MS.gene25125 | -0.808401 | 3.15E-50 | -1.69E-46 |
| MS.gene052966 | MS.gene25125 | -0.806113 | 9.63E-50 | -1.69E-46 |
| MS.gene053203 | MS.gene25125 | -0.810971 | 8.84E-51 | -1.69E-46 |
| MS.gene053420 | MS.gene25125 | 0.861729 | 8.36E-64 | -1.69E-46 |
| MS.gene053488 | MS.gene25125 | 0.831926 | 1.27E-55 | -1.69E-46 |
| MS.gene053549 | MS.gene25125 | 0.828021 | 1.13E-54 | -1.69E-46 |
| MS.gene053561 | MS.gene25125 | 0.858995 | 5.61E-63 | -1.69E-46 |
| MS.gene053887 | MS.gene25125 | 0.812468 | 4.18E-51 | -1.69E-46 |
| MS.gene054616 | MS.gene25125 | 0.809321 | 2.00E-50 | -1.69E-46 |
| MS.gene054642 | MS.gene25125 | -0.824423 | 8.14E-54 | -1.69E-46 |
| MS.gene054707 | MS.gene25125 | 0.804227 | 2.39E-49 | -1.69E-46 |
| MS.gene054708 | MS.gene25125 | 0.854597 | 1.11E-61 | -1.69E-46 |
| MS.gene05470 | MS.gene25125 | -0.827924 | 1.20E-54 | -1.69E-46 |
| MS.gene054954 | MS.gene25125 | -0.83524 | 1.88E-56 | -1.69E-46 |
| MS.gene054959 | MS.gene25125 | 0.82283 | 1.92E-53 | -1.69E-46 |
| MS.gene055124 | MS.gene25125 | 0.836335 | 9.94E-57 | -1.69E-46 |
| MS.gene055154 | MS.gene25125 | 0.851464 | 8.73E-61 | -1.69E-46 |
| MS.gene055202 | MS.gene25125 | 0.805105 | 1.57E-49 | -1.69E-46 |
| MS.gene055362 | MS.gene25125 | -0.845523 | 3.85E-59 | -1.69E-46 |
| MS.gene055502 | MS.gene25125 | -0.841884 | 3.63E-58 | -1.69E-46 |
| MS.gene055577 | MS.gene25125 | -0.831934 | 1.26E-55 | -1.69E-46 |
| MS.gene055748 | MS.gene25125 | -0.805017 | 1.64E-49 | -1.69E-46 |
| MS.gene055751 | MS.gene25125 | -0.814893 | 1.22E-51 | -1.69E-46 |
| MS.gene055776 | MS.gene25125 | -0.807698 | 4.45E-50 | -1.69E-46 |
| MS.gene05589 | MS.gene25125 | -0.826777 | 2.25E-54 | -1.69E-46 |
| MS.gene055942 | MS.gene25125 | 0.825935 | 3.57E-54 | -1.69E-46 |
| MS.gene056224 | MS.gene25125 | 0.816499 | 5.36E-52 | -1.69E-46 |
| MS.gene056310 | MS.gene25125 | 0.80167 | 8.07E-49 | -1.69E-46 |
| MS.gene056311 | MS.gene25125 | 0.824539 | 7.64E-54 | -1.69E-46 |
| MS.gene056313 | MS.gene25125 | 0.802867 | 4.58E-49 | -1.69E-46 |
| MS.gene056504 | MS.gene25125 | -0.841139 | 5.70E-58 | -1.69E-46 |
| MS.gene056657 | MS.gene25125 | -0.817418 | 3.33E-52 | -1.69E-46 |
| MS.gene056692 | MS.gene25125 | -0.807084 | 6.01E-50 | -1.69E-46 |
| MS.gene056748 | MS.gene25125 | 0.806747 | 7.08E-50 | -1.69E-46 |
| MS.gene056856 | MS.gene25125 | 0.829525 | 4.90E-55 | -1.69E-46 |
| MS.gene056857 | MS.gene25125 | 0.809412 | 1.92E-50 | -1.69E-46 |
| MS.gene057014 | MS.gene25125 | 0.825341 | 4.94E-54 | -1.69E-46 |
| MS.gene057768 | MS.gene25125 | 0.817272 | 3.59E-52 | -1.69E-46 |
| MS.gene058068 | MS.gene25125 | 0.815356 | 9.64E-52 | -1.69E-46 |
| MS.gene058099 | MS.gene25125 | 0.81646 | 5.47E-52 | -1.69E-46 |
| MS.gene058109 | MS.gene25125 | 0.814955 | 1.18E-51 | -1.69E-46 |
| MS.gene058111 | MS.gene25125 | 0.806644 | 7.44E-50 | -1.69E-46 |
| MS.gene058117 | MS.gene25125 | 0.829946 | 3.87E-55 | -1.69E-46 |
| MS.gene058171 | MS.gene25125 | 0.830927 | 2.23E-55 | -1.69E-46 |
| MS.gene058173 | MS.gene25125 | 0.823243 | 1.54E-53 | -1.69E-46 |
| MS.gene058175 | MS.gene25125 | 0.8339 | 4.09E-56 | -1.69E-46 |
| MS.gene058268 | MS.gene25125 | 0.806492 | 8.01E-50 | -1.69E-46 |
| MS.gene058269 | MS.gene25125 | 0.804387 | 2.21E-49 | -1.69E-46 |
| MS.gene058338 | MS.gene25125 | -0.804423 | 2.18E-49 | -1.69E-46 |
| MS.gene05837 | MS.gene25125 | -0.82295 | 1.80E-53 | -1.69E-46 |
| MS.gene058419 | MS.gene25125 | -0.828523 | 8.57E-55 | -1.69E-46 |
| MS.gene058493 | MS.gene25125 | 0.813179 | 2.92E-51 | -1.69E-46 |
| MS.gene058544 | MS.gene25125 | -0.812423 | 4.27E-51 | -1.69E-46 |
| MS.gene058603 | MS.gene25125 | 0.815818 | 7.61E-52 | -1.69E-46 |
| MS.gene058628 | MS.gene25125 | 0.813288 | 2.76E-51 | -1.69E-46 |
| MS.gene058629 | MS.gene25125 | 0.803821 | 2.90E-49 | -1.69E-46 |
| MS.gene058630 | MS.gene25125 | 0.811401 | 7.13E-51 | -1.69E-46 |
| MS.gene058773 | MS.gene25125 | -0.818866 | 1.57E-52 | -1.69E-46 |
| MS.gene059022 | MS.gene25125 | -0.871055 | 9.14E-67 | -1.69E-46 |
| MS.gene059023 | MS.gene25125 | -0.817973 | 2.50E-52 | -1.69E-46 |
| MS.gene059223 | MS.gene25125 | 0.820595 | 6.31E-53 | -1.69E-46 |
| MS.gene059677 | MS.gene25125 | -0.83481 | 2.42E-56 | -1.69E-46 |
| MS.gene059690 | MS.gene25125 | 0.803751 | 3.00E-49 | -1.69E-46 |
| MS.gene059694 | MS.gene25125 | 0.805817 | 1.11E-49 | -1.69E-46 |
| MS.gene059697 | MS.gene25125 | 0.807824 | 4.18E-50 | -1.69E-46 |
| MS.gene059718 | MS.gene25125 | -0.809642 | 1.71E-50 | -1.69E-46 |
| MS.gene059865 | MS.gene25125 | -0.855545 | 5.87E-62 | -1.69E-46 |
| MS.gene059916 | MS.gene25125 | 0.853258 | 2.69E-61 | -1.69E-46 |
| MS.gene060703 | MS.gene25125 | -0.811957 | 5.40E-51 | -1.69E-46 |
| MS.gene060762 | MS.gene25125 | -0.829429 | 5.17E-55 | -1.69E-46 |
| MS.gene060778 | MS.gene25125 | -0.803747 | 3.01E-49 | -1.69E-46 |
| MS.gene06077 | MS.gene25125 | -0.855361 | 6.64E-62 | -1.69E-46 |
| MS.gene060982 | MS.gene25125 | -0.822193 | 2.70E-53 | -1.69E-46 |
| MS.gene061150 | MS.gene25125 | -0.806745 | 7.09E-50 | -1.69E-46 |
| MS.gene061157 | MS.gene25125 | 0.804519 | 2.08E-49 | -1.69E-46 |
PPI:
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene25125.t1 | MTR_8g020840 | 97.473 | 554 | 14 | 0 | 1 | 554 | 1 | 554 | 0.0 | 1124 |
| MS.gene25125.t1 | MTR_4g097080 | 32.405 | 395 | 234 | 12 | 167 | 548 | 129 | 503 | 4.73e-52 | 186 |
| MS.gene25125.t1 | MTR_5g015490 | 30.864 | 405 | 237 | 12 | 165 | 548 | 108 | 490 | 1.56e-44 | 164 |
| MS.gene25125.t1 | MTR_2g099110 | 27.176 | 471 | 278 | 15 | 111 | 548 | 13 | 451 | 1.26e-38 | 147 |
| MS.gene25125.t1 | MTR_5g015950 | 26.636 | 428 | 250 | 12 | 169 | 547 | 33 | 445 | 8.69e-33 | 131 |
| MS.gene25125.t1 | MTR_3g053270 | 26.636 | 428 | 250 | 12 | 169 | 547 | 33 | 445 | 8.69e-33 | 131 |
| MS.gene25125.t1 | MTR_4g095500 | 27.586 | 435 | 245 | 13 | 164 | 547 | 52 | 467 | 1.09e-31 | 128 |
| MS.gene25125.t1 | MTR_2g089100 | 25.485 | 412 | 265 | 11 | 164 | 547 | 45 | 442 | 1.92e-30 | 124 |
| MS.gene25125.t1 | MTR_2g026250 | 24.874 | 398 | 253 | 14 | 169 | 548 | 227 | 596 | 2.11e-27 | 117 |
| MS.gene25125.t1 | MTR_1g029420 | 25.377 | 398 | 257 | 14 | 166 | 548 | 220 | 592 | 6.91e-27 | 115 |
| MS.gene25125.t1 | MTR_3g056110 | 26.000 | 400 | 246 | 15 | 169 | 548 | 173 | 542 | 4.11e-26 | 112 |
| MS.gene25125.t1 | MTR_3g065980 | 24.623 | 398 | 251 | 9 | 172 | 549 | 173 | 541 | 8.12e-24 | 105 |
| MS.gene25125.t1 | MTR_4g133660 | 25.124 | 402 | 246 | 15 | 169 | 547 | 173 | 542 | 2.97e-23 | 103 |
| MS.gene25125.t1 | MTR_5g097480 | 25.871 | 402 | 244 | 15 | 169 | 548 | 175 | 544 | 4.51e-22 | 100 |
| MS.gene25125.t1 | MTR_5g094450 | 24.439 | 401 | 255 | 14 | 169 | 548 | 159 | 532 | 1.41e-21 | 98.6 |
| MS.gene25125.t1 | MTR_7g062120 | 24.779 | 452 | 276 | 16 | 130 | 548 | 320 | 740 | 1.52e-21 | 99.4 |
| MS.gene25125.t1 | MTR_4g104020 | 24.641 | 418 | 265 | 13 | 153 | 548 | 131 | 520 | 3.13e-21 | 97.4 |
| MS.gene25125.t1 | MTR_3g089055 | 23.383 | 402 | 266 | 15 | 163 | 548 | 190 | 565 | 1.57e-20 | 95.5 |
| MS.gene25125.t1 | MTR_7g074650 | 24.289 | 387 | 244 | 11 | 175 | 548 | 442 | 792 | 1.66e-20 | 96.3 |
| MS.gene25125.t1 | MTR_3g089055 | 23.383 | 402 | 266 | 15 | 163 | 548 | 195 | 570 | 1.74e-20 | 95.5 |
| MS.gene25125.t1 | MTR_4g077760 | 25.745 | 369 | 249 | 10 | 185 | 548 | 207 | 555 | 8.86e-20 | 93.2 |
| MS.gene25125.t1 | MTR_7g027190 | 23.762 | 404 | 254 | 12 | 170 | 548 | 299 | 673 | 2.51e-19 | 92.0 |
| MS.gene25125.t1 | MTR_2g034260 | 20.631 | 412 | 289 | 10 | 155 | 549 | 195 | 585 | 7.16e-18 | 87.4 |
| MS.gene25125.t1 | MTR_2g097467 | 24.750 | 400 | 243 | 14 | 171 | 547 | 289 | 653 | 7.49e-18 | 87.4 |
| MS.gene25125.t1 | MTR_2g097410 | 25.127 | 394 | 240 | 15 | 160 | 524 | 360 | 727 | 2.92e-17 | 85.9 |
| MS.gene25125.t1 | MTR_1g069725 | 24.324 | 407 | 256 | 13 | 156 | 547 | 93 | 462 | 6.86e-17 | 84.0 |
| MS.gene25125.t1 | MTR_4g064160 | 23.849 | 478 | 301 | 16 | 103 | 547 | 236 | 683 | 1.21e-16 | 84.0 |
| MS.gene25125.t1 | MTR_2g034250 | 20.551 | 399 | 280 | 10 | 168 | 549 | 208 | 586 | 1.49e-16 | 83.2 |
| MS.gene25125.t1 | MTR_8g442410 | 22.169 | 415 | 275 | 13 | 155 | 549 | 140 | 526 | 6.93e-16 | 80.9 |
| MS.gene25125.t1 | MTR_3g072710 | 24.205 | 409 | 271 | 12 | 160 | 547 | 109 | 499 | 1.15e-15 | 80.1 |
| MS.gene25125.t1 | MTR_2g097473 | 22.506 | 431 | 276 | 14 | 139 | 547 | 259 | 653 | 4.97e-15 | 78.6 |
| MS.gene25125.t1 | MTR_2g097463 | 23.380 | 432 | 263 | 15 | 144 | 547 | 263 | 654 | 1.05e-14 | 77.4 |
| MS.gene25125.t1 | MTR_2g097310 | 24.260 | 507 | 313 | 18 | 69 | 547 | 174 | 637 | 1.46e-14 | 77.0 |
| MS.gene25125.t1 | MTR_4g064150 | 23.834 | 386 | 235 | 13 | 171 | 524 | 361 | 719 | 1.60e-14 | 77.0 |
| MS.gene25125.t1 | MTR_4g064120 | 25.505 | 396 | 236 | 16 | 171 | 539 | 254 | 617 | 2.35e-14 | 76.3 |
| MS.gene25125.t1 | MTR_4g064180 | 24.742 | 388 | 229 | 15 | 171 | 524 | 254 | 612 | 3.80e-14 | 75.9 |
| MS.gene25125.t1 | MTR_4g076020 | 23.575 | 386 | 239 | 13 | 175 | 548 | 88 | 429 | 4.78e-14 | 74.7 |
| MS.gene25125.t1 | MTR_4g064200 | 23.604 | 394 | 256 | 13 | 171 | 547 | 284 | 649 | 7.03e-14 | 75.1 |
| MS.gene25125.t1 | MTR_3g085310 | 78.947 | 38 | 8 | 0 | 478 | 515 | 21 | 58 | 1.05e-13 | 66.6 |
| MS.gene25125.t1 | MTR_2g034280 | 20.388 | 412 | 272 | 11 | 163 | 549 | 196 | 576 | 2.32e-13 | 73.2 |
| MS.gene25125.t1 | MTR_2g097390 | 23.929 | 397 | 251 | 11 | 171 | 547 | 275 | 640 | 3.63e-12 | 69.3 |
| MS.gene25125.t1 | MTR_2g097380 | 30.612 | 147 | 82 | 4 | 178 | 324 | 231 | 357 | 2.02e-11 | 67.0 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene25125.t1 | AT3G13840 | 51.171 | 555 | 213 | 12 | 2 | 548 | 6 | 510 | 3.60e-178 | 512 |
| MS.gene25125.t1 | AT3G49950 | 30.414 | 411 | 233 | 12 | 164 | 547 | 23 | 407 | 1.09e-45 | 166 |
| MS.gene25125.t1 | AT4G37650 | 30.123 | 405 | 249 | 13 | 164 | 548 | 139 | 529 | 1.84e-43 | 162 |
| MS.gene25125.t1 | AT3G03450 | 27.390 | 387 | 248 | 10 | 172 | 549 | 184 | 546 | 7.78e-32 | 129 |
| MS.gene25125.t1 | AT5G17490 | 26.972 | 393 | 246 | 10 | 170 | 552 | 159 | 520 | 6.92e-29 | 120 |
| MS.gene25125.t1 | AT4G17230 | 25.879 | 398 | 249 | 14 | 169 | 548 | 156 | 525 | 5.20e-27 | 115 |
| MS.gene25125.t1 | AT4G17230 | 25.879 | 398 | 249 | 14 | 169 | 548 | 156 | 525 | 5.20e-27 | 115 |
| MS.gene25125.t1 | AT5G48150 | 26.010 | 396 | 246 | 13 | 172 | 548 | 123 | 490 | 1.41e-24 | 107 |
| MS.gene25125.t1 | AT5G48150 | 26.010 | 396 | 246 | 13 | 172 | 548 | 123 | 490 | 1.41e-24 | 107 |
| MS.gene25125.t1 | AT5G48150 | 26.010 | 396 | 246 | 13 | 172 | 548 | 123 | 490 | 1.41e-24 | 107 |
| MS.gene25125.t1 | AT5G48150 | 26.010 | 396 | 246 | 13 | 172 | 548 | 123 | 490 | 1.41e-24 | 107 |
| MS.gene25125.t1 | AT5G59450 | 25.180 | 556 | 320 | 22 | 39 | 548 | 93 | 598 | 8.07e-24 | 105 |
| MS.gene25125.t1 | AT1G14920 | 25.128 | 390 | 248 | 11 | 172 | 549 | 173 | 530 | 2.17e-23 | 104 |
| MS.gene25125.t1 | AT1G66350 | 25.128 | 390 | 246 | 12 | 172 | 551 | 156 | 509 | 2.57e-23 | 103 |
| MS.gene25125.t1 | AT5G66770 | 27.320 | 388 | 241 | 13 | 175 | 548 | 224 | 584 | 1.71e-22 | 102 |
| MS.gene25125.t1 | AT2G29065 | 24.936 | 393 | 262 | 8 | 171 | 547 | 252 | 627 | 8.11e-22 | 100 |
| MS.gene25125.t1 | AT2G01570 | 24.103 | 390 | 252 | 11 | 172 | 549 | 225 | 582 | 3.38e-21 | 97.8 |
| MS.gene25125.t1 | AT1G21450 | 24.557 | 395 | 259 | 15 | 169 | 548 | 223 | 593 | 3.44e-21 | 97.8 |
| MS.gene25125.t1 | AT1G50600 | 26.196 | 397 | 245 | 15 | 171 | 548 | 159 | 526 | 9.40e-20 | 93.2 |
| MS.gene25125.t1 | AT1G50600 | 26.055 | 403 | 238 | 14 | 171 | 548 | 234 | 601 | 1.15e-19 | 93.2 |
| MS.gene25125.t1 | AT1G50600 | 26.055 | 403 | 238 | 14 | 171 | 548 | 230 | 597 | 1.17e-19 | 93.2 |
| MS.gene25125.t1 | AT3G54220 | 24.936 | 389 | 240 | 12 | 175 | 547 | 297 | 649 | 1.56e-19 | 92.8 |
| MS.gene25125.t1 | AT3G50650 | 26.596 | 376 | 230 | 11 | 191 | 548 | 195 | 542 | 2.35e-19 | 92.0 |
| MS.gene25125.t1 | AT1G07520 | 23.762 | 505 | 325 | 13 | 79 | 547 | 213 | 693 | 4.15e-19 | 91.7 |
| MS.gene25125.t1 | AT1G07520 | 23.762 | 505 | 325 | 13 | 79 | 547 | 212 | 692 | 4.33e-19 | 91.7 |
| MS.gene25125.t1 | AT1G07520 | 23.762 | 505 | 325 | 13 | 79 | 547 | 48 | 528 | 4.77e-19 | 90.9 |
| MS.gene25125.t1 | AT1G07520 | 23.762 | 505 | 325 | 13 | 79 | 547 | 48 | 528 | 4.77e-19 | 90.9 |
| MS.gene25125.t1 | AT5G52510 | 26.316 | 323 | 197 | 10 | 249 | 548 | 336 | 640 | 3.01e-17 | 85.5 |
| MS.gene25125.t1 | AT5G41920 | 25.381 | 394 | 242 | 16 | 171 | 548 | 43 | 400 | 2.14e-16 | 82.0 |
| MS.gene25125.t1 | AT1G07530 | 25.058 | 431 | 275 | 16 | 137 | 547 | 362 | 764 | 3.27e-16 | 82.4 |
| MS.gene25125.t1 | AT1G50420 | 22.976 | 457 | 257 | 17 | 165 | 551 | 51 | 482 | 7.38e-16 | 80.9 |
| MS.gene25125.t1 | AT3G46600 | 24.228 | 421 | 231 | 16 | 171 | 552 | 212 | 583 | 2.61e-14 | 76.3 |
| MS.gene25125.t1 | AT3G46600 | 24.228 | 421 | 231 | 16 | 171 | 552 | 4 | 375 | 6.14e-14 | 73.9 |
| MS.gene25125.t1 | AT3G46600 | 24.228 | 421 | 231 | 16 | 171 | 552 | 180 | 551 | 6.92e-14 | 74.7 |
| MS.gene25125.t1 | AT1G55580 | 24.684 | 316 | 199 | 11 | 251 | 548 | 151 | 445 | 2.91e-13 | 72.4 |
| MS.gene25125.t1 | AT1G63100 | 22.760 | 413 | 247 | 18 | 171 | 547 | 277 | 653 | 1.38e-11 | 67.8 |
| MS.gene25125.t1 | AT1G63100 | 22.760 | 413 | 247 | 18 | 171 | 547 | 252 | 628 | 1.45e-11 | 67.8 |
Find 145 sgRNAs with CRISPR-Local
Find 156 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| CTCTTTCTTTCCATCATTCT+TGG | 0.070532 | 8.4:-72806269 | MS.gene25125:CDS |
| TATCTGCAGATTGACATTTA+AGG | 0.180511 | 8.4:+72805274 | None:intergenic |
| CCAGATGGACCTACTGAAAA+TGG | 0.187041 | 8.4:+72805335 | None:intergenic |
| TCTTAAGTCTCTTGTTCTTT+TGG | 0.246051 | 8.4:+72805990 | None:intergenic |
| GGGTTTGCAGGGGAAGTATT+TGG | 0.246526 | 8.4:-72804843 | MS.gene25125:CDS |
| CTGTTTCTTTCTGTTCTTTG+TGG | 0.248275 | 8.4:-72804710 | MS.gene25125:CDS |
| AAAATGGGGTCTCCATATTT+TGG | 0.254033 | 8.4:+72805351 | None:intergenic |
| TTTCTGTTCTTTGTGGAAAC+TGG | 0.270808 | 8.4:-72804703 | MS.gene25125:CDS |
| TCTGGTGATACTTTCTCTTC+TGG | 0.283806 | 8.4:-72805317 | MS.gene25125:CDS |
| CATTGAAAATGACCAAAATA+TGG | 0.300761 | 8.4:-72805363 | MS.gene25125:CDS |
| TGGATGTAACCATTGTTATA+TGG | 0.301517 | 8.4:+72806241 | None:intergenic |
| TGAACTGAGCACAGACAATA+AGG | 0.307645 | 8.4:+72805183 | None:intergenic |
| TTATTGTCTGTGCTCAGTTC+AGG | 0.312907 | 8.4:-72805181 | MS.gene25125:CDS |
| ATTCAGATTTCCACCGGTTA+TGG | 0.314217 | 8.4:+72805796 | None:intergenic |
| AATTAGTATTGGCATCAATT+TGG | 0.314452 | 8.4:+72806173 | None:intergenic |
| TCACTTAATATTACCCCTTT+AGG | 0.320054 | 8.4:+72805089 | None:intergenic |
| CACGAAGAGTGGAGTACTTA+TGG | 0.327317 | 8.4:-72805013 | MS.gene25125:CDS |
| TAAGGAAGTATGATAACAAT+TGG | 0.334184 | 8.4:-72804788 | MS.gene25125:CDS |
| GGTACTGGTTACTTATATCT+TGG | 0.359164 | 8.4:+72806194 | None:intergenic |
| CACATTCTTGACTGGCTTGA+AGG | 0.362157 | 8.4:-72806298 | MS.gene25125:CDS |
| ATGAAAGAAGCAGGGTTTGC+AGG | 0.378552 | 8.4:-72804855 | MS.gene25125:CDS |
| CACAAAGAACAGAAAGAAAC+AGG | 0.382192 | 8.4:+72804711 | None:intergenic |
| ATGACGAAGATGAAGATAAA+TGG | 0.385639 | 8.4:+72805675 | None:intergenic |
| ATTGTTACTGTTACTTCCAT+TGG | 0.386351 | 8.4:+72805874 | None:intergenic |
| GGGACGGTGGTTAGAAAATC+TGG | 0.389102 | 8.4:-72805923 | MS.gene25125:CDS |
| ACTTTCTCTTCTGGACTCCT+TGG | 0.394777 | 8.4:-72805308 | MS.gene25125:CDS |
| CCGATGAATGAAAGTGATAA+TGG | 0.406397 | 8.4:-72805962 | MS.gene25125:CDS |
| TTTGGAGAGGATGCAATTGA+TGG | 0.410953 | 8.4:-72804825 | MS.gene25125:CDS |
| ATGTGATCTGATGTTGGATT+TGG | 0.414259 | 8.4:+72806316 | None:intergenic |
| TCTTCGGCATTTCGTTTCTT+CGG | 0.417116 | 8.4:+72806043 | None:intergenic |
| AGAAACTCACTTCTTTCATC+AGG | 0.418712 | 8.4:+72805134 | None:intergenic |
| ATAGTACAAGTGTGGAACTA+TGG | 0.422556 | 8.4:-72804746 | MS.gene25125:CDS |
| TTTCTTCGGCAAATCTGAAA+AGG | 0.422754 | 8.4:+72806057 | None:intergenic |
| CAGATGGACCTACTGAAAAT+GGG | 0.424264 | 8.4:+72805336 | None:intergenic |
| TTTGAGACTTAATTCATCTT+CGG | 0.425894 | 8.4:+72806027 | None:intergenic |
| GATTCCATATCTCATACTCT+TGG | 0.427654 | 8.4:+72806221 | None:intergenic |
| GAAGCATTTGCTATGTTACT+AGG | 0.433616 | 8.4:+72805554 | None:intergenic |
| AAGCCGGTGGTTGGCATCGC+CGG | 0.433916 | 8.4:+72805727 | None:intergenic |
| TCTTCGTCATCTACCCCATC+AGG | 0.437019 | 8.4:-72805662 | MS.gene25125:CDS |
| GGTATGTTGTTAGAACTATT+AGG | 0.437816 | 8.4:+72806079 | None:intergenic |
| CAGTAACAATGGAAACAATA+AGG | 0.442067 | 8.4:-72805861 | MS.gene25125:CDS |
| TGAGAGGCATGGAGCCTAAA+GGG | 0.443623 | 8.4:-72805103 | MS.gene25125:CDS |
| AATGGAGATGCAGCTCTTGA+AGG | 0.456048 | 8.4:-72805944 | MS.gene25125:CDS |
| TATTGGCATCAATTTGGTAC+TGG | 0.457250 | 8.4:+72806179 | None:intergenic |
| ATGGAGGTCGAGCTTTGTTA+AGG | 0.458730 | 8.4:-72804806 | MS.gene25125:CDS |
| TGAAGGGTGCGCAAATTGTT+CGG | 0.463218 | 8.4:+72805506 | None:intergenic |
| AACCACCGGCTTGCAGCGCA+TGG | 0.464860 | 8.4:-72805716 | MS.gene25125:CDS |
| CATCAGATCACATTCTTGAC+TGG | 0.465424 | 8.4:-72806306 | MS.gene25125:CDS |
| CAGACAATAAGGGTTTCATC+AGG | 0.467867 | 8.4:+72805194 | None:intergenic |
| TGTGAAAGAATGAAAGAAGC+AGG | 0.479878 | 8.4:-72804864 | MS.gene25125:CDS |
| CCATTATCACTTTCATTCAT+CGG | 0.481330 | 8.4:+72805962 | None:intergenic |
| GGCATTAGAAGAATTAGTAT+TGG | 0.481797 | 8.4:+72806162 | None:intergenic |
| ATTTGCTATGTTACTAGGAA+AGG | 0.483089 | 8.4:+72805559 | None:intergenic |
| CTCAAGGCCTCTAGAAAAGT+TGG | 0.483348 | 8.4:+72805446 | None:intergenic |
| CCTTGTGCTATAGCCATAAC+CGG | 0.486586 | 8.4:-72805809 | MS.gene25125:CDS |
| AAGGAAGTATGATAACAATT+GGG | 0.487490 | 8.4:-72804787 | MS.gene25125:CDS |
| ATGCGCTGCAAGCCGGTGGT+TGG | 0.488488 | 8.4:+72805718 | None:intergenic |
| TGATGTTGGATTTGGTTCCA+TGG | 0.491247 | 8.4:+72806324 | None:intergenic |
| CTTGACATTGGAGTCTCTCA+TGG | 0.497221 | 8.4:-72805479 | MS.gene25125:CDS |
| TGAAAGAAGCAGGGTTTGCA+GGG | 0.503859 | 8.4:-72804854 | MS.gene25125:CDS |
| ACATCCAAGAGTATGAGATA+TGG | 0.506767 | 8.4:-72806225 | MS.gene25125:CDS |
| TATGGATCATCCAAGAATGA+TGG | 0.507403 | 8.4:+72806259 | None:intergenic |
| TTCAGCTAGAACTTGAAGAA+TGG | 0.511790 | 8.4:+72805532 | None:intergenic |
| TTCTCCTTTCATCACTGTCA+CGG | 0.512017 | 8.4:+72804955 | None:intergenic |
| TTCTTCGGCAAATCTGAAAA+GGG | 0.512552 | 8.4:+72806058 | None:intergenic |
| AATGTTAGTTGTGCTGTTTG+TGG | 0.520846 | 8.4:+72806141 | None:intergenic |
| GAAGACCATGCGCTGCAAGC+CGG | 0.522939 | 8.4:+72805711 | None:intergenic |
| TTAGCATTCAATGTCTGCAA+TGG | 0.523978 | 8.4:+72805233 | None:intergenic |
| TCCACCAGGTCGACGACTCA+AGG | 0.527743 | 8.4:+72805430 | None:intergenic |
| CTCCAATGTCAAGGATGTGA+AGG | 0.528283 | 8.4:+72805489 | None:intergenic |
| CAAAAGTTATAGTCCCTGAT+GGG | 0.531586 | 8.4:+72805648 | None:intergenic |
| ATGGAGATGCAGCTCTTGAA+GGG | 0.536419 | 8.4:-72805943 | MS.gene25125:CDS |
| TTGAGAGGCATGGAGCCTAA+AGG | 0.536843 | 8.4:-72805104 | MS.gene25125:CDS |
| CACACGATTCAGATTTCCAC+CGG | 0.537218 | 8.4:+72805790 | None:intergenic |
| AAATCTGGTGGGAACAAGAA+AGG | 0.541486 | 8.4:-72805908 | MS.gene25125:CDS |
| GACAATAAGGGTTTCATCAG+GGG | 0.542576 | 8.4:+72805196 | None:intergenic |
| TGTTAGAACTATTAGGCTCA+AGG | 0.546508 | 8.4:+72806086 | None:intergenic |
| TCCTTTCGTTCATTTCACGC+TGG | 0.552507 | 8.4:+72804898 | None:intergenic |
| CTACCGGCGATGCCAACCAC+CGG | 0.555240 | 8.4:-72805730 | MS.gene25125:CDS |
| GAACAAGAAAGGTGCAGCTA+AGG | 0.556763 | 8.4:-72805897 | MS.gene25125:CDS |
| AAGAGGCATTAACGACAGTA+AGG | 0.559463 | 8.4:+72805390 | None:intergenic |
| CACTCTTCGTGAGAATCCGT+TGG | 0.559554 | 8.4:+72805025 | None:intergenic |
| GTTGGCATCGCCGGTAGTTG+AGG | 0.559671 | 8.4:+72805736 | None:intergenic |
| ACAAGAGGAGGAGGTCCACC+AGG | 0.563233 | 8.4:+72805416 | None:intergenic |
| CAGTGATGAAAGGAGAATGA+TGG | 0.563415 | 8.4:-72804949 | MS.gene25125:CDS |
| TCTGAAGGTGTTGAGAGGCA+TGG | 0.564144 | 8.4:-72805114 | MS.gene25125:CDS |
| ATGTTGAGCTTGAACTACTC+TGG | 0.564625 | 8.4:+72804672 | None:intergenic |
| ATGGAAACAATAAGGATGGT+AGG | 0.566559 | 8.4:-72805853 | MS.gene25125:CDS |
| CTCAAGGGATGTTATACTTG+TGG | 0.567441 | 8.4:+72806102 | None:intergenic |
| AACAATGGAAACAATAAGGA+TGG | 0.567730 | 8.4:-72805857 | MS.gene25125:CDS |
| AATGGAAGTAACAGTAACAA+TGG | 0.568724 | 8.4:-72805872 | MS.gene25125:CDS |
| GCAAAAGTTATAGTCCCTGA+TGG | 0.570125 | 8.4:+72805647 | None:intergenic |
| TGCAGGGGAAGTATTTGGAG+AGG | 0.571772 | 8.4:-72804838 | MS.gene25125:CDS |
| GACCATGCGCTGCAAGCCGG+TGG | 0.571829 | 8.4:+72805714 | None:intergenic |
| GTTAGAACTATTAGGCTCAA+GGG | 0.573060 | 8.4:+72806087 | None:intergenic |
| CCGGTTATGGCTATAGCACA+AGG | 0.573315 | 8.4:+72805809 | None:intergenic |
| GTAAGGCGAACAAGAGGAGG+AGG | 0.573398 | 8.4:+72805407 | None:intergenic |
| GAACTGAGCACAGACAATAA+GGG | 0.574095 | 8.4:+72805184 | None:intergenic |
| AAAGGTGCAGCTAAGGCCAA+TGG | 0.579176 | 8.4:-72805890 | MS.gene25125:CDS |
| CATGAGCTAGCCTCAACTAC+CGG | 0.582321 | 8.4:-72805746 | MS.gene25125:CDS |
| GAGGCCTTGAGTCGTCGACC+TGG | 0.583244 | 8.4:-72805434 | MS.gene25125:CDS |
| AGTTCTACGAGGTTAGCCCT+TGG | 0.589690 | 8.4:-72805586 | MS.gene25125:CDS |
| CAACGGATTCTCACGAAGAG+TGG | 0.590408 | 8.4:-72805024 | MS.gene25125:CDS |
| ACCCTTCACATCCTTGACAT+TGG | 0.592655 | 8.4:-72805491 | MS.gene25125:CDS |
| AGACAATAAGGGTTTCATCA+GGG | 0.596272 | 8.4:+72805195 | None:intergenic |
| ACAGTAAGGCGAACAAGAGG+AGG | 0.598078 | 8.4:+72805404 | None:intergenic |
| AGAAGAAAATAGTACAAGTG+TGG | 0.598352 | 8.4:-72804754 | MS.gene25125:CDS |
| GAGTTTCTGAAGGTGTTGAG+AGG | 0.604609 | 8.4:-72805119 | MS.gene25125:CDS |
| TTGGATGATCCATATAACAA+TGG | 0.604773 | 8.4:-72806250 | MS.gene25125:CDS |
| GAGTGTTGTTGCAGTAGTTG+TGG | 0.605351 | 8.4:-72805056 | MS.gene25125:CDS |
| AAAACCGTGACAGTGATGAA+AGG | 0.606029 | 8.4:-72804959 | MS.gene25125:CDS |
| TCAAGAATGTGATCTGATGT+TGG | 0.611351 | 8.4:+72806310 | None:intergenic |
| AGATGCAGCTCTTGAAGGGA+CGG | 0.612821 | 8.4:-72805939 | MS.gene25125:CDS |
| AAACAATAAGGATGGTAGGT+GGG | 0.614807 | 8.4:-72805849 | MS.gene25125:CDS |
| GCCTTGAGTCGTCGACCTGG+TGG | 0.619448 | 8.4:-72805431 | MS.gene25125:CDS |
| GTACAAGTGTGGAACTATGG+TGG | 0.621371 | 8.4:-72804743 | MS.gene25125:CDS |
| ACCAGCGTGAAATGAACGAA+AGG | 0.622182 | 8.4:-72804899 | MS.gene25125:CDS |
| CTTCGTCATCTACCCCATCA+GGG | 0.622872 | 8.4:-72805661 | MS.gene25125:CDS |
| AAGAACAGAAAGAAACAGGT+TGG | 0.623585 | 8.4:+72804715 | None:intergenic |
| GTGAAAGAATGAAAGAAGCA+GGG | 0.627954 | 8.4:-72804863 | MS.gene25125:CDS |
| TCCAATGTCAAGGATGTGAA+GGG | 0.631798 | 8.4:+72805490 | None:intergenic |
| GAAGAGAAAGTATCACCAGA+TGG | 0.632861 | 8.4:+72805320 | None:intergenic |
| GAAACAATAAGGATGGTAGG+TGG | 0.634500 | 8.4:-72805850 | MS.gene25125:CDS |
| GGAGAGGATGCAATTGATGG+AGG | 0.634715 | 8.4:-72804822 | MS.gene25125:CDS |
| GAGTCTCTCATGGTGTGCAA+TGG | 0.634794 | 8.4:-72805469 | MS.gene25125:CDS |
| AAGGAGAATGATGGAAGGCG+AGG | 0.637246 | 8.4:-72804940 | MS.gene25125:CDS |
| CATGAGAGACTCCAATGTCA+AGG | 0.642013 | 8.4:+72805480 | None:intergenic |
| GAGAGGCATGGAGCCTAAAG+GGG | 0.644363 | 8.4:-72805102 | MS.gene25125:CDS |
| TTACTAGGAAAGGAAAACCA+AGG | 0.646391 | 8.4:+72805569 | None:intergenic |
| GATGAAAGGAGAATGATGGA+AGG | 0.646507 | 8.4:-72804945 | MS.gene25125:CDS |
| TACTAGGAAAGGAAAACCAA+GGG | 0.646959 | 8.4:+72805570 | None:intergenic |
| ACGACAGTAAGGCGAACAAG+AGG | 0.653539 | 8.4:+72805401 | None:intergenic |
| TTAAGGATTGAGCATAACCA+AGG | 0.659329 | 8.4:+72805291 | None:intergenic |
| AGATGGACCTACTGAAAATG+GGG | 0.663709 | 8.4:+72805337 | None:intergenic |
| AATATTAAGTGAGAACAACA+TGG | 0.666720 | 8.4:-72805078 | MS.gene25125:CDS |
| TGAAAGAAGTGAGTTTCTGA+AGG | 0.676073 | 8.4:-72805129 | MS.gene25125:CDS |
| TGCAGCTCTTGAAGGGACGG+TGG | 0.681085 | 8.4:-72805936 | MS.gene25125:CDS |
| TGTGCTATAGCCATAACCGG+TGG | 0.686438 | 8.4:-72805806 | MS.gene25125:CDS |
| GAAAGAAGCAGGGTTTGCAG+GGG | 0.689170 | 8.4:-72804853 | MS.gene25125:CDS |
| AAAAGTTATAGTCCCTGATG+GGG | 0.695486 | 8.4:+72805649 | None:intergenic |
| ACGGTGGTTAGAAAATCTGG+TGG | 0.698436 | 8.4:-72805920 | MS.gene25125:CDS |
| GAAGAGTGGAGTACTTATGG+AGG | 0.701033 | 8.4:-72805010 | MS.gene25125:CDS |
| CGGTGGTTAGAAAATCTGGT+GGG | 0.703407 | 8.4:-72805919 | MS.gene25125:CDS |
| CGGTTATGGCTATAGCACAA+GGG | 0.728518 | 8.4:+72805810 | None:intergenic |
| ATCATTACTGAAGTTCTACG+AGG | 0.730047 | 8.4:-72805597 | MS.gene25125:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| ! | AATATTAAGTGAGAACAACA+TGG | - | chr8.4:72805936-72805955 | MS.gene25125:CDS | 25.0% |
| ! | CATTGAAAATGACCAAAATA+TGG | - | chr8.4:72805651-72805670 | MS.gene25125:CDS | 25.0% |
| !! | AAGGAAGTATGATAACAATT+GGG | - | chr8.4:72806227-72806246 | MS.gene25125:CDS | 25.0% |
| !! | AGAACTTCAGTAATGATTTT+TGG | + | chr8.4:72805414-72805433 | None:intergenic | 25.0% |
| !! | TAAGGAAGTATGATAACAAT+TGG | - | chr8.4:72806226-72806245 | MS.gene25125:CDS | 25.0% |
| !! | TTTGAGACTTAATTCATCTT+CGG | + | chr8.4:72804990-72805009 | None:intergenic | 25.0% |
| !!! | AATTAGTATTGGCATCAATT+TGG | + | chr8.4:72804844-72804863 | None:intergenic | 25.0% |
| !!! | CATATTTTGGTCATTTTCAA+TGG | + | chr8.4:72805653-72805672 | None:intergenic | 25.0% |
| AACAATGGAAACAATAAGGA+TGG | - | chr8.4:72805157-72805176 | MS.gene25125:CDS | 30.0% | |
| AATGGAAGTAACAGTAACAA+TGG | - | chr8.4:72805142-72805161 | MS.gene25125:CDS | 30.0% | |
| AGAAGAAAATAGTACAAGTG+TGG | - | chr8.4:72806260-72806279 | MS.gene25125:CDS | 30.0% | |
| ATGACGAAGATGAAGATAAA+TGG | + | chr8.4:72805342-72805361 | None:intergenic | 30.0% | |
| CAGTAACAATGGAAACAATA+AGG | - | chr8.4:72805153-72805172 | MS.gene25125:CDS | 30.0% | |
| CCATTATCACTTTCATTCAT+CGG | + | chr8.4:72805055-72805074 | None:intergenic | 30.0% | |
| GGCATTAGAAGAATTAGTAT+TGG | + | chr8.4:72804855-72804874 | None:intergenic | 30.0% | |
| GGTATGTTGTTAGAACTATT+AGG | + | chr8.4:72804938-72804957 | None:intergenic | 30.0% | |
| TATCTGCAGATTGACATTTA+AGG | + | chr8.4:72805743-72805762 | None:intergenic | 30.0% | |
| TCACTTAATATTACCCCTTT+AGG | + | chr8.4:72805928-72805947 | None:intergenic | 30.0% | |
| TGGATGTAACCATTGTTATA+TGG | + | chr8.4:72804776-72804795 | None:intergenic | 30.0% | |
| TTGGATGATCCATATAACAA+TGG | - | chr8.4:72804764-72804783 | MS.gene25125:CDS | 30.0% | |
| ! | ATTGTTACTGTTACTTCCAT+TGG | + | chr8.4:72805143-72805162 | None:intergenic | 30.0% |
| ! | TCTTAAGTCTCTTGTTCTTT+TGG | + | chr8.4:72805027-72805046 | None:intergenic | 30.0% |
| !! | AATGATTTTTGGAAGAATCG+CGG | + | chr8.4:72805403-72805422 | None:intergenic | 30.0% |
| !! | ATTTGCTATGTTACTAGGAA+AGG | + | chr8.4:72805458-72805477 | None:intergenic | 30.0% |
| !! | GTTTTTAGATTCAACCAGTT+CGG | - | chr8.4:72806026-72806045 | MS.gene25125:CDS | 30.0% |
| AAAAGTTATAGTCCCTGATG+GGG | + | chr8.4:72805368-72805387 | None:intergenic | 35.0% | |
| AAACAATAAGGATGGTAGGT+GGG | - | chr8.4:72805165-72805184 | MS.gene25125:CDS | 35.0% | |
| AAGAACAGAAAGAAACAGGT+TGG | + | chr8.4:72806302-72806321 | None:intergenic | 35.0% | |
| AGAAACTCACTTCTTTCATC+AGG | + | chr8.4:72805883-72805902 | None:intergenic | 35.0% | |
| AGACAATAAGGGTTTCATCA+GGG | + | chr8.4:72805822-72805841 | None:intergenic | 35.0% | |
| ATAGTACAAGTGTGGAACTA+TGG | - | chr8.4:72806268-72806287 | MS.gene25125:CDS | 35.0% | |
| ATCATTACTGAAGTTCTACG+AGG | - | chr8.4:72805417-72805436 | MS.gene25125:CDS | 35.0% | |
| ATGGAAACAATAAGGATGGT+AGG | - | chr8.4:72805161-72805180 | MS.gene25125:CDS | 35.0% | |
| ATGTGATCTGATGTTGGATT+TGG | + | chr8.4:72804701-72804720 | None:intergenic | 35.0% | |
| CAAAAGTTATAGTCCCTGAT+GGG | + | chr8.4:72805369-72805388 | None:intergenic | 35.0% | |
| CACAAAGAACAGAAAGAAAC+AGG | + | chr8.4:72806306-72806325 | None:intergenic | 35.0% | |
| CCGATGAATGAAAGTGATAA+TGG | - | chr8.4:72805052-72805071 | MS.gene25125:CDS | 35.0% | |
| CTCTTTCTTTCCATCATTCT+TGG | - | chr8.4:72804745-72804764 | MS.gene25125:CDS | 35.0% | |
| GATTCCATATCTCATACTCT+TGG | + | chr8.4:72804796-72804815 | None:intergenic | 35.0% | |
| GTGAAAGAATGAAAGAAGCA+GGG | - | chr8.4:72806151-72806170 | MS.gene25125:CDS | 35.0% | |
| GTTAGAACTATTAGGCTCAA+GGG | + | chr8.4:72804930-72804949 | None:intergenic | 35.0% | |
| TACTAGGAAAGGAAAACCAA+GGG | + | chr8.4:72805447-72805466 | None:intergenic | 35.0% | |
| TATGGATCATCCAAGAATGA+TGG | + | chr8.4:72804758-72804777 | None:intergenic | 35.0% | |
| TATTGGCATCAATTTGGTAC+TGG | + | chr8.4:72804838-72804857 | None:intergenic | 35.0% | |
| TCAAGAATGTGATCTGATGT+TGG | + | chr8.4:72804707-72804726 | None:intergenic | 35.0% | |
| TGAAAGAAGTGAGTTTCTGA+AGG | - | chr8.4:72805885-72805904 | MS.gene25125:CDS | 35.0% | |
| TGAACGAAAGGAGAGAAAAA+TGG | - | chr8.4:72806127-72806146 | MS.gene25125:CDS | 35.0% | |
| TGTGAAAGAATGAAAGAAGC+AGG | - | chr8.4:72806150-72806169 | MS.gene25125:CDS | 35.0% | |
| TGTTAGAACTATTAGGCTCA+AGG | + | chr8.4:72804931-72804950 | None:intergenic | 35.0% | |
| TTAAGGATTGAGCATAACCA+AGG | + | chr8.4:72805726-72805745 | None:intergenic | 35.0% | |
| TTACTAGGAAAGGAAAACCA+AGG | + | chr8.4:72805448-72805467 | None:intergenic | 35.0% | |
| TTAGCATTCAATGTCTGCAA+TGG | + | chr8.4:72805784-72805803 | None:intergenic | 35.0% | |
| TTCAGCTAGAACTTGAAGAA+TGG | + | chr8.4:72805485-72805504 | None:intergenic | 35.0% | |
| TTCTTCGGCAAATCTGAAAA+GGG | + | chr8.4:72804959-72804978 | None:intergenic | 35.0% | |
| TTTCTGTTCTTTGTGGAAAC+TGG | - | chr8.4:72806311-72806330 | MS.gene25125:CDS | 35.0% | |
| TTTCTTCGGCAAATCTGAAA+AGG | + | chr8.4:72804960-72804979 | None:intergenic | 35.0% | |
| ! | AAAATGGGGTCTCCATATTT+TGG | + | chr8.4:72805666-72805685 | None:intergenic | 35.0% |
| ! | ACATCCAAGAGTATGAGATA+TGG | - | chr8.4:72804789-72804808 | MS.gene25125:CDS | 35.0% |
| ! | CTGTTTCTTTCTGTTCTTTG+TGG | - | chr8.4:72806304-72806323 | MS.gene25125:CDS | 35.0% |
| !! | AATGTTAGTTGTGCTGTTTG+TGG | + | chr8.4:72804876-72804895 | None:intergenic | 35.0% |
| !! | GAAGCATTTGCTATGTTACT+AGG | + | chr8.4:72805463-72805482 | None:intergenic | 35.0% |
| !! | GGTACTGGTTACTTATATCT+TGG | + | chr8.4:72804823-72804842 | None:intergenic | 35.0% |
| !! | GTCATTTTCAATGGATGAAG+AGG | + | chr8.4:72805644-72805663 | None:intergenic | 35.0% |
| !!! | CTCTTGTTCTTTTGGTTTTG+TGG | + | chr8.4:72805019-72805038 | None:intergenic | 35.0% |
| AAAACCGTGACAGTGATGAA+AGG | - | chr8.4:72806055-72806074 | MS.gene25125:CDS | 40.0% | |
| AAATCTGGTGGGAACAAGAA+AGG | - | chr8.4:72805106-72805125 | MS.gene25125:CDS | 40.0% | |
| AGATGGACCTACTGAAAATG+GGG | + | chr8.4:72805680-72805699 | None:intergenic | 40.0% | |
| CAGACAATAAGGGTTTCATC+AGG | + | chr8.4:72805823-72805842 | None:intergenic | 40.0% | |
| CAGATGGACCTACTGAAAAT+GGG | + | chr8.4:72805681-72805700 | None:intergenic | 40.0% | |
| CAGTGATGAAAGGAGAATGA+TGG | - | chr8.4:72806065-72806084 | MS.gene25125:CDS | 40.0% | |
| CATCAGATCACATTCTTGAC+TGG | - | chr8.4:72804708-72804727 | MS.gene25125:CDS | 40.0% | |
| CTCAAGGGATGTTATACTTG+TGG | + | chr8.4:72804915-72804934 | None:intergenic | 40.0% | |
| GAAACAATAAGGATGGTAGG+TGG | - | chr8.4:72805164-72805183 | MS.gene25125:CDS | 40.0% | |
| GAACTGAGCACAGACAATAA+GGG | + | chr8.4:72805833-72805852 | None:intergenic | 40.0% | |
| GACAATAAGGGTTTCATCAG+GGG | + | chr8.4:72805821-72805840 | None:intergenic | 40.0% | |
| GCAAAAGTTATAGTCCCTGA+TGG | + | chr8.4:72805370-72805389 | None:intergenic | 40.0% | |
| TCCAATGTCAAGGATGTGAA+GGG | + | chr8.4:72805527-72805546 | None:intergenic | 40.0% | |
| TCTGGTGATACTTTCTCTTC+TGG | - | chr8.4:72805697-72805716 | MS.gene25125:CDS | 40.0% | |
| TCTTCGGCATTTCGTTTCTT+CGG | + | chr8.4:72804974-72804993 | None:intergenic | 40.0% | |
| TGAACTGAGCACAGACAATA+AGG | + | chr8.4:72805834-72805853 | None:intergenic | 40.0% | |
| TTATTGTCTGTGCTCAGTTC+AGG | - | chr8.4:72805833-72805852 | MS.gene25125:CDS | 40.0% | |
| TTCTCCTTTCATCACTGTCA+CGG | + | chr8.4:72806062-72806081 | None:intergenic | 40.0% | |
| TTTGGAGAGGATGCAATTGA+TGG | - | chr8.4:72806189-72806208 | MS.gene25125:CDS | 40.0% | |
| ! | ATTCAGATTTCCACCGGTTA+TGG | + | chr8.4:72805221-72805240 | None:intergenic | 40.0% |
| ! | GATGAAAGGAGAATGATGGA+AGG | - | chr8.4:72806069-72806088 | MS.gene25125:CDS | 40.0% |
| ! | TGATGTTGGATTTGGTTCCA+TGG | + | chr8.4:72804693-72804712 | None:intergenic | 40.0% |
| !! | AAGAGGCATTAACGACAGTA+AGG | + | chr8.4:72805627-72805646 | None:intergenic | 40.0% |
| !! | GAAGAGAAAGTATCACCAGA+TGG | + | chr8.4:72805697-72805716 | None:intergenic | 40.0% |
| AATGGAGATGCAGCTCTTGA+AGG | - | chr8.4:72805070-72805089 | MS.gene25125:CDS | 45.0% | |
| ACCAGCGTGAAATGAACGAA+AGG | - | chr8.4:72806115-72806134 | MS.gene25125:CDS | 45.0% | |
| ACCCTTCACATCCTTGACAT+TGG | - | chr8.4:72805523-72805542 | MS.gene25125:CDS | 45.0% | |
| ACGGTGGTTAGAAAATCTGG+TGG | - | chr8.4:72805094-72805113 | MS.gene25125:CDS | 45.0% | |
| ACTTTCTCTTCTGGACTCCT+TGG | - | chr8.4:72805706-72805725 | MS.gene25125:CDS | 45.0% | |
| ATGAAAGAAGCAGGGTTTGC+AGG | - | chr8.4:72806159-72806178 | MS.gene25125:CDS | 45.0% | |
| ATGGAGATGCAGCTCTTGAA+GGG | - | chr8.4:72805071-72805090 | MS.gene25125:CDS | 45.0% | |
| CACACGATTCAGATTTCCAC+CGG | + | chr8.4:72805227-72805246 | None:intergenic | 45.0% | |
| CATGAGAGACTCCAATGTCA+AGG | + | chr8.4:72805537-72805556 | None:intergenic | 45.0% | |
| CCAGATGGACCTACTGAAAA+TGG | + | chr8.4:72805682-72805701 | None:intergenic | 45.0% | |
| CCTTGTGCTATAGCCATAAC+CGG | - | chr8.4:72805205-72805224 | MS.gene25125:CDS | 45.0% | |
| CGGTGGTTAGAAAATCTGGT+GGG | - | chr8.4:72805095-72805114 | MS.gene25125:CDS | 45.0% | |
| CGGTTATGGCTATAGCACAA+GGG | + | chr8.4:72805207-72805226 | None:intergenic | 45.0% | |
| CTCCAATGTCAAGGATGTGA+AGG | + | chr8.4:72805528-72805547 | None:intergenic | 45.0% | |
| CTTGACATTGGAGTCTCTCA+TGG | - | chr8.4:72805535-72805554 | MS.gene25125:CDS | 45.0% | |
| GTACAAGTGTGGAACTATGG+TGG | - | chr8.4:72806271-72806290 | MS.gene25125:CDS | 45.0% | |
| TCCTTTCGTTCATTTCACGC+TGG | + | chr8.4:72806119-72806138 | None:intergenic | 45.0% | |
| TGAAAGAAGCAGGGTTTGCA+GGG | - | chr8.4:72806160-72806179 | MS.gene25125:CDS | 45.0% | |
| ! | ACGGTTTTTGAATGCCGAAC+TGG | + | chr8.4:72806043-72806062 | None:intergenic | 45.0% |
| ! | AGTTGTGGCGATTTTGCCAA+CGG | - | chr8.4:72805973-72805992 | MS.gene25125:CDS | 45.0% |
| ! | ATGGAGACCCCATTTTCAGT+AGG | - | chr8.4:72805670-72805689 | MS.gene25125:CDS | 45.0% |
| ! | CACGAAGAGTGGAGTACTTA+TGG | - | chr8.4:72806001-72806020 | MS.gene25125:CDS | 45.0% |
| ! | CCATTTTCAGTAGGTCCATC+TGG | - | chr8.4:72805679-72805698 | MS.gene25125:CDS | 45.0% |
| ! | CTCAAGGCCTCTAGAAAAGT+TGG | + | chr8.4:72805571-72805590 | None:intergenic | 45.0% |
| ! | GAACAAGAAAGGTGCAGCTA+AGG | - | chr8.4:72805117-72805136 | MS.gene25125:CDS | 45.0% |
| ! | GAAGAGTGGAGTACTTATGG+AGG | - | chr8.4:72806004-72806023 | MS.gene25125:CDS | 45.0% |
| ! | GAGTGTTGTTGCAGTAGTTG+TGG | - | chr8.4:72805958-72805977 | MS.gene25125:CDS | 45.0% |
| ! | GCAATGGCCAACTTTTCTAG+AGG | - | chr8.4:72805561-72805580 | MS.gene25125:CDS | 45.0% |
| ! | TGAAGGGTGCGCAAATTGTT+CGG | + | chr8.4:72805511-72805530 | None:intergenic | 45.0% |
| !! | ATGGAGGTCGAGCTTTGTTA+AGG | - | chr8.4:72806208-72806227 | MS.gene25125:CDS | 45.0% |
| !! | CACATTCTTGACTGGCTTGA+AGG | - | chr8.4:72804716-72804735 | MS.gene25125:CDS | 45.0% |
| !! | GAGTTTCTGAAGGTGTTGAG+AGG | - | chr8.4:72805895-72805914 | MS.gene25125:CDS | 45.0% |
| ACAGTAAGGCGAACAAGAGG+AGG | + | chr8.4:72805613-72805632 | None:intergenic | 50.0% | |
| ACGACAGTAAGGCGAACAAG+AGG | + | chr8.4:72805616-72805635 | None:intergenic | 50.0% | |
| AGATGCAGCTCTTGAAGGGA+CGG | - | chr8.4:72805075-72805094 | MS.gene25125:CDS | 50.0% | |
| CACTCTTCGTGAGAATCCGT+TGG | + | chr8.4:72805992-72806011 | None:intergenic | 50.0% | |
| CCGGTTATGGCTATAGCACA+AGG | + | chr8.4:72805208-72805227 | None:intergenic | 50.0% | |
| CTTCGTCATCTACCCCATCA+GGG | - | chr8.4:72805353-72805372 | MS.gene25125:CDS | 50.0% | |
| GAAAGAAGCAGGGTTTGCAG+GGG | - | chr8.4:72806161-72806180 | MS.gene25125:CDS | 50.0% | |
| GAGTCTCTCATGGTGTGCAA+TGG | - | chr8.4:72805545-72805564 | MS.gene25125:CDS | 50.0% | |
| GGAGAGGATGCAATTGATGG+AGG | - | chr8.4:72806192-72806211 | MS.gene25125:CDS | 50.0% | |
| GGGACGGTGGTTAGAAAATC+TGG | - | chr8.4:72805091-72805110 | MS.gene25125:CDS | 50.0% | |
| TCTTCGTCATCTACCCCATC+AGG | - | chr8.4:72805352-72805371 | MS.gene25125:CDS | 50.0% | |
| TGTGCTATAGCCATAACCGG+TGG | - | chr8.4:72805208-72805227 | MS.gene25125:CDS | 50.0% | |
| ! | AAAGGTGCAGCTAAGGCCAA+TGG | - | chr8.4:72805124-72805143 | MS.gene25125:CDS | 50.0% |
| ! | AAGGAGAATGATGGAAGGCG+AGG | - | chr8.4:72806074-72806093 | MS.gene25125:CDS | 50.0% |
| ! | AGTTCTACGAGGTTAGCCCT+TGG | - | chr8.4:72805428-72805447 | MS.gene25125:CDS | 50.0% |
| ! | CAACGGATTCTCACGAAGAG+TGG | - | chr8.4:72805990-72806009 | MS.gene25125:CDS | 50.0% |
| ! | CATGAGCTAGCCTCAACTAC+CGG | - | chr8.4:72805268-72805287 | MS.gene25125:CDS | 50.0% |
| ! | TGAGAGGCATGGAGCCTAAA+GGG | - | chr8.4:72805911-72805930 | MS.gene25125:CDS | 50.0% |
| ! | TTGAGAGGCATGGAGCCTAA+AGG | - | chr8.4:72805910-72805929 | MS.gene25125:CDS | 50.0% |
| !! | GGGTTTGCAGGGGAAGTATT+TGG | - | chr8.4:72806171-72806190 | MS.gene25125:CDS | 50.0% |
| !! | TCTGAAGGTGTTGAGAGGCA+TGG | - | chr8.4:72805900-72805919 | MS.gene25125:CDS | 50.0% |
| !! | TGCAGGGGAAGTATTTGGAG+AGG | - | chr8.4:72806176-72806195 | MS.gene25125:CDS | 50.0% |
| GTAAGGCGAACAAGAGGAGG+AGG | + | chr8.4:72805610-72805629 | None:intergenic | 55.0% | |
| ! | GAGAGGCATGGAGCCTAAAG+GGG | - | chr8.4:72805912-72805931 | MS.gene25125:CDS | 55.0% |
| ACAAGAGGAGGAGGTCCACC+AGG | + | chr8.4:72805601-72805620 | None:intergenic | 60.0% | |
| GAAGACCATGCGCTGCAAGC+CGG | + | chr8.4:72805306-72805325 | None:intergenic | 60.0% | |
| GTTGGCATCGCCGGTAGTTG+AGG | + | chr8.4:72805281-72805300 | None:intergenic | 60.0% | |
| TCCACCAGGTCGACGACTCA+AGG | + | chr8.4:72805587-72805606 | None:intergenic | 60.0% | |
| TGCAGCTCTTGAAGGGACGG+TGG | - | chr8.4:72805078-72805097 | MS.gene25125:CDS | 60.0% | |
| AAGCCGGTGGTTGGCATCGC+CGG | + | chr8.4:72805290-72805309 | None:intergenic | 65.0% | |
| ATGCGCTGCAAGCCGGTGGT+TGG | + | chr8.4:72805299-72805318 | None:intergenic | 65.0% | |
| CTACCGGCGATGCCAACCAC+CGG | - | chr8.4:72805284-72805303 | MS.gene25125:CDS | 65.0% | |
| GAGGCCTTGAGTCGTCGACC+TGG | - | chr8.4:72805580-72805599 | MS.gene25125:CDS | 65.0% | |
| GCCTTGAGTCGTCGACCTGG+TGG | - | chr8.4:72805583-72805602 | MS.gene25125:CDS | 65.0% | |
| !! | AACCACCGGCTTGCAGCGCA+TGG | - | chr8.4:72805298-72805317 | MS.gene25125:CDS | 65.0% |
| GACCATGCGCTGCAAGCCGG+TGG | + | chr8.4:72805303-72805322 | None:intergenic | 70.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr8.4 | gene | 72804686 | 72806350 | 72804686 | ID=MS.gene25125 |
| chr8.4 | mRNA | 72804686 | 72806350 | 72804686 | ID=MS.gene25125.t1;Parent=MS.gene25125 |
| chr8.4 | exon | 72804686 | 72806350 | 72804686 | ID=MS.gene25125.t1.exon1;Parent=MS.gene25125.t1 |
| chr8.4 | CDS | 72804686 | 72806350 | 72804686 | ID=cds.MS.gene25125.t1;Parent=MS.gene25125.t1 |
| Gene Sequence |
| Protein sequence |
