Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene43473.t1 | RHN65147.1 | 98.2 | 228 | 4 | 0 | 29 | 256 | 82 | 309 | 8.70E-122 | 446.4 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene43473.t1 | P69834 | 75.7 | 235 | 54 | 1 | 18 | 252 | 71 | 302 | 5.8e-98 | 358.6 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene43473.t1 | A0A396IQG4 | 98.2 | 228 | 4 | 0 | 29 | 256 | 82 | 309 | 6.3e-122 | 446.4 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| MS.gene049137 | MS.gene43473 | 0.859024 | 5.50E-63 | -1.69E-46 |
| MS.gene049171 | MS.gene43473 | 0.841888 | 3.62E-58 | -1.69E-46 |
| MS.gene049217 | MS.gene43473 | 0.841379 | 4.93E-58 | -1.69E-46 |
| MS.gene049222 | MS.gene43473 | 0.85149 | 8.58E-61 | -1.69E-46 |
| MS.gene049285 | MS.gene43473 | 0.861956 | 7.12E-64 | -1.69E-46 |
| MS.gene049320 | MS.gene43473 | 0.822341 | 2.50E-53 | -1.69E-46 |
| MS.gene049609 | MS.gene43473 | 0.849277 | 3.58E-60 | -1.69E-46 |
| MS.gene049615 | MS.gene43473 | 0.817346 | 3.46E-52 | -1.69E-46 |
| MS.gene049627 | MS.gene43473 | 0.876627 | 1.20E-68 | -1.69E-46 |
| MS.gene049805 | MS.gene43473 | 0.831147 | 1.97E-55 | -1.69E-46 |
| MS.gene05010 | MS.gene43473 | 0.806465 | 8.12E-50 | -1.69E-46 |
| MS.gene050163 | MS.gene43473 | 0.845654 | 3.55E-59 | -1.69E-46 |
| MS.gene050165 | MS.gene43473 | 0.818448 | 1.95E-52 | -1.69E-46 |
| MS.gene050333 | MS.gene43473 | 0.822374 | 2.45E-53 | -1.69E-46 |
| MS.gene050504 | MS.gene43473 | 0.837519 | 4.96E-57 | -1.69E-46 |
| MS.gene050518 | MS.gene43473 | 0.830933 | 2.22E-55 | -1.69E-46 |
| MS.gene050577 | MS.gene43473 | 0.805153 | 1.53E-49 | -1.69E-46 |
| MS.gene050593 | MS.gene43473 | 0.825265 | 5.15E-54 | -1.69E-46 |
| MS.gene050675 | MS.gene43473 | 0.803775 | 2.97E-49 | -1.69E-46 |
| MS.gene050699 | MS.gene43473 | 0.836851 | 7.34E-57 | -1.69E-46 |
| MS.gene050747 | MS.gene43473 | 0.852598 | 4.16E-61 | -1.69E-46 |
| MS.gene050772 | MS.gene43473 | 0.851652 | 7.72E-61 | -1.69E-46 |
| MS.gene050781 | MS.gene43473 | 0.813806 | 2.12E-51 | -1.69E-46 |
| MS.gene050950 | MS.gene43473 | 0.845211 | 4.68E-59 | -1.69E-46 |
| MS.gene05100 | MS.gene43473 | 0.832087 | 1.15E-55 | -1.69E-46 |
| MS.gene051167 | MS.gene43473 | -0.805675 | 1.19E-49 | -1.69E-46 |
| MS.gene051387 | MS.gene43473 | 0.841104 | 5.82E-58 | -1.69E-46 |
| MS.gene051666 | MS.gene43473 | 0.848379 | 6.36E-60 | -1.69E-46 |
| MS.gene051694 | MS.gene43473 | 0.902342 | 1.07E-78 | -1.69E-46 |
| MS.gene051858 | MS.gene43473 | 0.855123 | 7.79E-62 | -1.69E-46 |
| MS.gene052164 | MS.gene43473 | 0.804773 | 1.84E-49 | -1.69E-46 |
| MS.gene052322 | MS.gene43473 | 0.805518 | 1.28E-49 | -1.69E-46 |
| MS.gene052379 | MS.gene43473 | 0.804895 | 1.73E-49 | -1.69E-46 |
| MS.gene052421 | MS.gene43473 | 0.81048 | 1.13E-50 | -1.69E-46 |
| MS.gene052486 | MS.gene43473 | 0.804242 | 2.37E-49 | -1.69E-46 |
| MS.gene052503 | MS.gene43473 | 0.804019 | 2.64E-49 | -1.69E-46 |
| MS.gene052615 | MS.gene43473 | 0.831526 | 1.59E-55 | -1.69E-46 |
| MS.gene052670 | MS.gene43473 | 0.815446 | 9.21E-52 | -1.69E-46 |
| MS.gene052823 | MS.gene43473 | 0.803483 | 3.41E-49 | -1.69E-46 |
| MS.gene052825 | MS.gene43473 | 0.80537 | 1.38E-49 | -1.69E-46 |
| MS.gene052966 | MS.gene43473 | 0.802279 | 6.05E-49 | -1.69E-46 |
| MS.gene052982 | MS.gene43473 | 0.811296 | 7.52E-51 | -1.69E-46 |
| MS.gene053107 | MS.gene43473 | 0.807103 | 5.95E-50 | -1.69E-46 |
| MS.gene053203 | MS.gene43473 | 0.84421 | 8.70E-59 | -1.69E-46 |
| MS.gene053207 | MS.gene43473 | 0.839288 | 1.73E-57 | -1.69E-46 |
| MS.gene053213 | MS.gene43473 | 0.861226 | 1.19E-63 | -1.69E-46 |
| MS.gene053286 | MS.gene43473 | 0.856558 | 2.97E-62 | -1.69E-46 |
| MS.gene053322 | MS.gene43473 | 0.839852 | 1.24E-57 | -1.69E-46 |
| MS.gene053436 | MS.gene43473 | 0.809502 | 1.83E-50 | -1.69E-46 |
| MS.gene053574 | MS.gene43473 | 0.821037 | 4.99E-53 | -1.69E-46 |
| MS.gene053579 | MS.gene43473 | 0.809089 | 2.25E-50 | -1.69E-46 |
| MS.gene053632 | MS.gene43473 | 0.822083 | 2.86E-53 | -1.69E-46 |
| MS.gene053824 | MS.gene43473 | 0.82883 | 7.23E-55 | -1.69E-46 |
| MS.gene054408 | MS.gene43473 | 0.825886 | 3.67E-54 | -1.69E-46 |
| MS.gene054595 | MS.gene43473 | 0.806932 | 6.47E-50 | -1.69E-46 |
| MS.gene054600 | MS.gene43473 | 0.831952 | 1.25E-55 | -1.69E-46 |
| MS.gene054642 | MS.gene43473 | 0.846794 | 1.74E-59 | -1.69E-46 |
| MS.gene05470 | MS.gene43473 | 0.807362 | 5.24E-50 | -1.69E-46 |
| MS.gene054802 | MS.gene43473 | 0.811417 | 7.07E-51 | -1.69E-46 |
| MS.gene054803 | MS.gene43473 | 0.804416 | 2.18E-49 | -1.69E-46 |
| MS.gene054804 | MS.gene43473 | 0.809148 | 2.18E-50 | -1.69E-46 |
| MS.gene054927 | MS.gene43473 | 0.834273 | 3.30E-56 | -1.69E-46 |
| MS.gene054954 | MS.gene43473 | 0.830435 | 2.94E-55 | -1.69E-46 |
| MS.gene05505 | MS.gene43473 | 0.813256 | 2.81E-51 | -1.69E-46 |
| MS.gene055206 | MS.gene43473 | 0.806968 | 6.36E-50 | -1.69E-46 |
| MS.gene055362 | MS.gene43473 | 0.856647 | 2.79E-62 | -1.69E-46 |
| MS.gene055499 | MS.gene43473 | 0.803086 | 4.12E-49 | -1.69E-46 |
| MS.gene055502 | MS.gene43473 | 0.8336 | 4.86E-56 | -1.69E-46 |
| MS.gene055577 | MS.gene43473 | 0.854536 | 1.15E-61 | -1.69E-46 |
| MS.gene055647 | MS.gene43473 | 0.815956 | 7.09E-52 | -1.69E-46 |
| MS.gene055722 | MS.gene43473 | 0.82384 | 1.12E-53 | -1.69E-46 |
| MS.gene055941 | MS.gene43473 | 0.843488 | 1.36E-58 | -1.69E-46 |
| MS.gene056083 | MS.gene43473 | 0.856161 | 3.88E-62 | -1.69E-46 |
| MS.gene056374 | MS.gene43473 | 0.824744 | 6.84E-54 | -1.69E-46 |
| MS.gene056409 | MS.gene43473 | 0.827577 | 1.45E-54 | -1.69E-46 |
| MS.gene056510 | MS.gene43473 | 0.812632 | 3.85E-51 | -1.69E-46 |
| MS.gene056550 | MS.gene43473 | -0.805385 | 1.37E-49 | -1.69E-46 |
| MS.gene056610 | MS.gene43473 | 0.852455 | 4.57E-61 | -1.69E-46 |
| MS.gene056657 | MS.gene43473 | 0.818319 | 2.09E-52 | -1.69E-46 |
| MS.gene056692 | MS.gene43473 | 0.839485 | 1.54E-57 | -1.69E-46 |
| MS.gene057011 | MS.gene43473 | 0.836067 | 1.16E-56 | -1.69E-46 |
| MS.gene057129 | MS.gene43473 | 0.811366 | 7.26E-51 | -1.69E-46 |
| MS.gene057146 | MS.gene43473 | 0.832187 | 1.09E-55 | -1.69E-46 |
| MS.gene057331 | MS.gene43473 | 0.800472 | 1.42E-48 | -1.69E-46 |
| MS.gene057416 | MS.gene43473 | 0.874781 | 5.16E-68 | -1.69E-46 |
| MS.gene057658 | MS.gene43473 | 0.829532 | 4.88E-55 | -1.69E-46 |
| MS.gene057831 | MS.gene43473 | 0.840514 | 8.31E-58 | -1.69E-46 |
| MS.gene058019 | MS.gene43473 | 0.826705 | 2.34E-54 | -1.69E-46 |
| MS.gene058323 | MS.gene43473 | 0.834113 | 3.62E-56 | -1.69E-46 |
| MS.gene05837 | MS.gene43473 | 0.838345 | 3.04E-57 | -1.69E-46 |
| MS.gene058419 | MS.gene43473 | 0.850765 | 1.37E-60 | -1.69E-46 |
| MS.gene058544 | MS.gene43473 | 0.839898 | 1.20E-57 | -1.69E-46 |
| MS.gene058773 | MS.gene43473 | 0.853826 | 1.85E-61 | -1.69E-46 |
| MS.gene058838 | MS.gene43473 | 0.828734 | 7.63E-55 | -1.69E-46 |
| MS.gene05883 | MS.gene43473 | 0.846664 | 1.88E-59 | -1.69E-46 |
| MS.gene059022 | MS.gene43473 | 0.832871 | 7.38E-56 | -1.69E-46 |
| MS.gene059023 | MS.gene43473 | 0.860189 | 2.46E-63 | -1.69E-46 |
| MS.gene059029 | MS.gene43473 | 0.8099 | 1.51E-50 | -1.69E-46 |
| MS.gene05934 | MS.gene43473 | 0.820041 | 8.46E-53 | -1.69E-46 |
| MS.gene059536 | MS.gene43473 | 0.84163 | 4.23E-58 | -1.69E-46 |
| MS.gene059677 | MS.gene43473 | 0.853636 | 2.10E-61 | -1.69E-46 |
| MS.gene059718 | MS.gene43473 | 0.877541 | 5.79E-69 | -1.69E-46 |
| MS.gene059756 | MS.gene43473 | 0.846361 | 2.28E-59 | -1.69E-46 |
| MS.gene059801 | MS.gene43473 | 0.847936 | 8.44E-60 | -1.69E-46 |
| MS.gene059902 | MS.gene43473 | 0.857861 | 1.22E-62 | -1.69E-46 |
| MS.gene059960 | MS.gene43473 | 0.821221 | 4.53E-53 | -1.69E-46 |
| MS.gene060193 | MS.gene43473 | 0.823512 | 1.33E-53 | -1.69E-46 |
| MS.gene060762 | MS.gene43473 | 0.827029 | 1.96E-54 | -1.69E-46 |
| MS.gene06077 | MS.gene43473 | 0.847533 | 1.09E-59 | -1.69E-46 |
| MS.gene06092 | MS.gene43473 | 0.876556 | 1.27E-68 | -1.69E-46 |
| MS.gene061150 | MS.gene43473 | 0.890843 | 6.83E-74 | -1.69E-46 |
| MS.gene061171 | MS.gene43473 | 0.81854 | 1.86E-52 | -1.69E-46 |
| MS.gene061200 | MS.gene43473 | 0.843452 | 1.39E-58 | -1.69E-46 |
PPI:
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene43473.t1 | MTR_4g134540 | 95.595 | 227 | 6 | 1 | 13 | 235 | 62 | 288 | 6.38e-159 | 443 |
| MS.gene43473.t1 | MTR_4g134540 | 93.519 | 108 | 3 | 1 | 13 | 116 | 62 | 169 | 2.80e-68 | 210 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene43473.t1 | AT2G02500 | 75.893 | 224 | 51 | 1 | 29 | 252 | 82 | 302 | 4.01e-124 | 355 |
| MS.gene43473.t1 | AT2G02500 | 75.893 | 224 | 51 | 1 | 29 | 252 | 82 | 302 | 4.01e-124 | 355 |
Find 67 sgRNAs with CRISPR-Local
Find 313 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| CATTCAACAATCCATCTTTA+AGG | 0.143755 | 8.4:-307558 | None:intergenic |
| TTGAATGGAGCTGCTGTTCT+TGG | 0.281782 | 8.4:+307574 | MS.gene43473:CDS |
| GTTACAAGAAGATGTGAAAA+AGG | 0.291390 | 8.4:+307011 | MS.gene43473:CDS |
| TGATATAAACAGGATGTTTA+AGG | 0.309094 | 8.4:-309607 | None:intergenic |
| AGAATATTGAATATAAATTC+TGG | 0.325941 | 8.4:+310707 | MS.gene43473:CDS |
| TTCTGTTTACAATGGCCTTC+AGG | 0.333766 | 8.4:+306202 | MS.gene43473:CDS |
| GTCTGGTTGGCAATTTCCTT+TGG | 0.336442 | 8.4:-306144 | None:intergenic |
| AAGGCTTTGAGCTTGTAAAT+AGG | 0.349441 | 8.4:+309275 | MS.gene43473:CDS |
| ATTTGTTTGTTTGTTTCTGC+AGG | 0.364668 | 8.4:+305646 | MS.gene43473:CDS |
| TCCTTGATTGTGGCCTTCAC+AGG | 0.375394 | 8.4:-307601 | None:intergenic |
| TCCTACAACGACATCTTTCA+AGG | 0.389033 | 8.4:+306028 | MS.gene43473:CDS |
| AAAGCAATATCTTCCTCTCT+TGG | 0.394637 | 8.4:+305846 | MS.gene43473:CDS |
| TTGTTTGTTTCTGCAGGAAC+AGG | 0.414253 | 8.4:+305652 | MS.gene43473:CDS |
| GGCAGTGCAAATTTGAGGTC+TGG | 0.415366 | 8.4:-306161 | None:intergenic |
| GATCCTTCGGTGATATAAAC+AGG | 0.418697 | 8.4:-309617 | None:intergenic |
| GACCTCAAATTTGCACTGCC+TGG | 0.426209 | 8.4:+306164 | MS.gene43473:CDS |
| TTCCAGGCAGTGCAAATTTG+AGG | 0.431618 | 8.4:-306166 | None:intergenic |
| CTTAAAGATGGATTGTTGAA+TGG | 0.444390 | 8.4:+307559 | MS.gene43473:CDS |
| TGGAGGGAAGGGCAAGAGAA+TGG | 0.444644 | 8.4:+305724 | MS.gene43473:CDS |
| ACATCTTCTTGTAACACTAA+AGG | 0.457853 | 8.4:-307003 | None:intergenic |
| GAATATTGAATATAAATTCT+GGG | 0.460313 | 8.4:+310708 | MS.gene43473:CDS |
| TGTACTGCTCGCTGGAGGGA+AGG | 0.473433 | 8.4:+305712 | MS.gene43473:CDS |
| CCCTGTGAAGGCCACAATCA+AGG | 0.478877 | 8.4:+307600 | MS.gene43473:CDS |
| GATGTTGGTATAAGATCCTT+CGG | 0.478970 | 8.4:-309630 | None:intergenic |
| TTCTTTGACTTGAAGCATGC+GGG | 0.479021 | 8.4:-305984 | None:intergenic |
| GGAGGGAAGGGCAAGAGAAT+GGG | 0.479045 | 8.4:+305725 | MS.gene43473:CDS |
| AAGCAATATCTTCCTCTCTT+GGG | 0.480844 | 8.4:+305847 | MS.gene43473:CDS |
| TCTGCTAGTAATAAATCATC+AGG | 0.483357 | 8.4:-310683 | None:intergenic |
| AAGAGAGGAAGATATTGCTT+TGG | 0.484756 | 8.4:-305844 | None:intergenic |
| AAGCCTTTCCTCAGCAACTC+GGG | 0.500793 | 8.4:-309259 | None:intergenic |
| ACCTTGAAAGATGTCGTTGT+AGG | 0.518450 | 8.4:-306029 | None:intergenic |
| TCCGTTGTACTGCTCGCTGG+AGG | 0.520002 | 8.4:+305707 | MS.gene43473:CDS |
| TGTTCTTGGTGTCCCTGTGA+AGG | 0.523023 | 8.4:+307588 | MS.gene43473:CDS |
| GGCAAACACCGAATCATTTG+TGG | 0.525156 | 8.4:+309096 | MS.gene43473:intron |
| ACGTACCTATAGAGTGCAAT+GGG | 0.526287 | 8.4:-305874 | None:intergenic |
| GTTTCTGCAGGAACAGGAGA+AGG | 0.526926 | 8.4:+305658 | MS.gene43473:CDS |
| TGTTCTGACCACAAATGATT+CGG | 0.528120 | 8.4:-309104 | None:intergenic |
| GTCTCCGTTGTACTGCTCGC+TGG | 0.529677 | 8.4:+305704 | MS.gene43473:CDS |
| AAAGCCTTTCCTCAGCAACT+CGG | 0.529936 | 8.4:-309260 | None:intergenic |
| GCCAACCCATTGCACTCTAT+AGG | 0.532866 | 8.4:+305869 | MS.gene43473:CDS |
| ATCATTTGTGGTCAGAACAC+TGG | 0.533413 | 8.4:+309108 | MS.gene43473:CDS |
| GTACTGCTCGCTGGAGGGAA+GGG | 0.538751 | 8.4:+305713 | MS.gene43473:CDS |
| GTGCAAATTTGAGGTCTGGT+TGG | 0.560440 | 8.4:-306157 | None:intergenic |
| TACTGACGATGTTTCCATTG+TGG | 0.566054 | 8.4:+309580 | MS.gene43473:CDS |
| CCTTGATTGTGGCCTTCACA+GGG | 0.566587 | 8.4:-307600 | None:intergenic |
| ATAGTTGACTACCTTGATGT+TGG | 0.566657 | 8.4:-309645 | None:intergenic |
| ACTGAATACCTCCTTGATTG+TGG | 0.574579 | 8.4:-307611 | None:intergenic |
| ACCTATAGAGTGCAATGGGT+TGG | 0.578481 | 8.4:-305870 | None:intergenic |
| ACTGCCTGGAAAAGAAAGAC+AGG | 0.579109 | 8.4:+306178 | MS.gene43473:CDS |
| CCGTTGTACTGCTCGCTGGA+GGG | 0.579349 | 8.4:+305708 | MS.gene43473:CDS |
| ATGGGAGATGCAGACTCCAC+AGG | 0.579587 | 8.4:+309144 | MS.gene43473:CDS |
| TACGTACCTATAGAGTGCAA+TGG | 0.580532 | 8.4:-305875 | None:intergenic |
| AGGAAGATATTGCTTTGGCA+TGG | 0.591255 | 8.4:-305839 | None:intergenic |
| TGAAAGATGTCGTTGTAGGA+AGG | 0.591296 | 8.4:-306025 | None:intergenic |
| AATATTGAATATAAATTCTG+GGG | 0.599667 | 8.4:+310709 | MS.gene43473:CDS |
| AGAAAACAGCACATTCCTGA+AGG | 0.603136 | 8.4:-306217 | None:intergenic |
| ATGTTTAAGGTGCTCCACAA+TGG | 0.606587 | 8.4:-309594 | None:intergenic |
| CCCTCCAGCGAGCAGTACAA+CGG | 0.611991 | 8.4:-305708 | None:intergenic |
| AGGATCTTATACCAACATCA+AGG | 0.612493 | 8.4:+309634 | MS.gene43473:CDS |
| GCAATGGGTTGGCCCAAGAG+AGG | 0.612871 | 8.4:-305859 | None:intergenic |
| TTTCTTTGACTTGAAGCATG+CGG | 0.613225 | 8.4:-305985 | None:intergenic |
| AAACCCGAGTTGCTGAGGAA+AGG | 0.625305 | 8.4:+309256 | MS.gene43473:CDS |
| CATCCTGTTTATATCACCGA+AGG | 0.627709 | 8.4:+309614 | MS.gene43473:CDS |
| AGACAGGATTCTGTTTACAA+TGG | 0.632163 | 8.4:+306194 | MS.gene43473:CDS |
| TTATCAAACCCGAGTTGCTG+AGG | 0.632450 | 8.4:+309251 | MS.gene43473:CDS |
| CCCCTCCCCTCAGATGCCAA+AGG | 0.647197 | 8.4:+306128 | MS.gene43473:intron |
| TGTGAAGGCCACAATCAAGG+AGG | 0.756192 | 8.4:+307603 | MS.gene43473:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | AATTTCTTCTTATTATAAAT+AGG | + | chr8.4:305813-305832 | MS.gene43473:intron | 10.0% |
| !! | ATGCATTTAATAATAATATA+AGG | - | chr8.4:306926-306945 | None:intergenic | 10.0% |
| !! | ATTTAAAAAATTAATTGACT+TGG | + | chr8.4:310507-310526 | MS.gene43473:intron | 10.0% |
| !! | ATTTCTTATAAAGTAAATAT+AGG | + | chr8.4:308223-308242 | MS.gene43473:intron | 10.0% |
| !!! | AAATTTATATATTTTGTATC+AGG | - | chr8.4:310637-310656 | None:intergenic | 10.0% |
| !!! | ATGTATATTTCATTTAATTT+TGG | + | chr8.4:309186-309205 | MS.gene43473:intron | 10.0% |
| !! | AAAAATAAAACAAACAAAAG+AGG | + | chr8.4:307711-307730 | MS.gene43473:intron | 15.0% |
| !! | AAACATTATACAAAAAATAG+AGG | + | chr8.4:308498-308517 | MS.gene43473:intron | 15.0% |
| !! | AATATTGAATATAAATTCTG+GGG | + | chr8.4:310709-310728 | MS.gene43473:CDS | 15.0% |
| !! | AATTTGGATAAATAACTAAA+GGG | - | chr8.4:310242-310261 | None:intergenic | 15.0% |
| !! | AGAATATTGAATATAAATTC+TGG | + | chr8.4:310707-310726 | MS.gene43473:CDS | 15.0% |
| !! | AGTATTTCTTCAATAAAAAA+AGG | - | chr8.4:309966-309985 | None:intergenic | 15.0% |
| !! | AGTTTGCATAAATAAAAATT+GGG | + | chr8.4:306832-306851 | MS.gene43473:intron | 15.0% |
| !! | ATAATTCTATCTAATCTAAT+GGG | - | chr8.4:310327-310346 | None:intergenic | 15.0% |
| !! | GAATATTGAATATAAATTCT+GGG | + | chr8.4:310708-310727 | MS.gene43473:CDS | 15.0% |
| !! | GATTGATTAATGTTATAAAA+AGG | - | chr8.4:305789-305808 | None:intergenic | 15.0% |
| !! | TAAAATTCAGAAAAATTAAG+CGG | - | chr8.4:307079-307098 | None:intergenic | 15.0% |
| !! | TAAGTTAAATTGTAAAGAAA+TGG | - | chr8.4:305932-305951 | None:intergenic | 15.0% |
| !! | TATAGATAAGTAATATAAGT+AGG | - | chr8.4:307524-307543 | None:intergenic | 15.0% |
| !! | TATTTACTTTATAAGAAATG+AGG | - | chr8.4:308222-308241 | None:intergenic | 15.0% |
| !! | TTAAAGAAATGAAAAATAGA+AGG | + | chr8.4:308368-308387 | MS.gene43473:intron | 15.0% |
| !! | TTAGAAATTTATTGAAAATG+CGG | - | chr8.4:306711-306730 | None:intergenic | 15.0% |
| !!! | TTATTAAATGCATTTTTTAC+AGG | + | chr8.4:306933-306952 | MS.gene43473:intron | 15.0% |
| !! | AACAGTTAATTAATCTTACA+TGG | - | chr8.4:306776-306795 | None:intergenic | 20.0% |
| !! | AATAATATTAATAGGCAAGA+GGG | - | chr8.4:306100-306119 | None:intergenic | 20.0% |
| !! | ATAACTATTAACTAATGTCT+AGG | - | chr8.4:307971-307990 | None:intergenic | 20.0% |
| !! | ATATGTCTGATAAAAATGTA+TGG | - | chr8.4:306412-306431 | None:intergenic | 20.0% |
| !! | CAAACACATAGTTAATAAAT+TGG | + | chr8.4:306673-306692 | MS.gene43473:intron | 20.0% |
| !! | CAATTTATTAACTATGTGTT+TGG | - | chr8.4:306675-306694 | None:intergenic | 20.0% |
| !! | CATAATTCTATCTAATCTAA+TGG | - | chr8.4:310328-310347 | None:intergenic | 20.0% |
| !! | CATTAGATTAGATAGAATTA+TGG | + | chr8.4:310326-310345 | MS.gene43473:intron | 20.0% |
| !! | CTCAATATTCCAAAATAAAA+CGG | - | chr8.4:308429-308448 | None:intergenic | 20.0% |
| !! | GAATTTGGATAAATAACTAA+AGG | - | chr8.4:310243-310262 | None:intergenic | 20.0% |
| !! | GAGTTTGCATAAATAAAAAT+TGG | + | chr8.4:306831-306850 | MS.gene43473:intron | 20.0% |
| !! | GGATAGTTAATATGTTAAAA+AGG | - | chr8.4:310410-310429 | None:intergenic | 20.0% |
| !! | TAATAATATTAATAGGCAAG+AGG | - | chr8.4:306101-306120 | None:intergenic | 20.0% |
| !! | TACATTTATGTTATTGTCAA+TGG | + | chr8.4:307208-307227 | MS.gene43473:intron | 20.0% |
| !! | TACTTATTATATGAGAAGTT+AGG | - | chr8.4:310009-310028 | None:intergenic | 20.0% |
| !! | TAGAAATTTATTGAAAATGC+GGG | - | chr8.4:306710-306729 | None:intergenic | 20.0% |
| !! | TATAAAATTGAGCTAAAGAA+AGG | - | chr8.4:306290-306309 | None:intergenic | 20.0% |
| !! | TATGTCTGATAAAAATGTAT+GGG | - | chr8.4:306411-306430 | None:intergenic | 20.0% |
| !! | TTAAATAGTATACATGATTC+AGG | - | chr8.4:310456-310475 | None:intergenic | 20.0% |
| !! | TTCATAAATAACTGAAGAAT+AGG | - | chr8.4:309340-309359 | None:intergenic | 20.0% |
| !!! | ATTTGTTAAGGAATCAAAAA+AGG | - | chr8.4:310194-310213 | None:intergenic | 20.0% |
| !!! | CATTTTTATCAGACATATTT+TGG | + | chr8.4:306414-306433 | MS.gene43473:intron | 20.0% |
| !!! | CTTATCTATATTCTGTTTTA+AGG | + | chr8.4:307534-307553 | MS.gene43473:intron | 20.0% |
| !!! | GCTCAATTTTATATTAATTC+AGG | + | chr8.4:306297-306316 | MS.gene43473:intron | 20.0% |
| !!! | TAAAGCTTTGTAAGTAATAA+AGG | - | chr8.4:309696-309715 | None:intergenic | 20.0% |
| !!! | TAATTTGCAAGGAAAATAAT+GGG | - | chr8.4:308704-308723 | None:intergenic | 20.0% |
| !!! | TATTTTTGTTTGTTCATACT+TGG | + | chr8.4:308917-308936 | MS.gene43473:intron | 20.0% |
| !!! | TGTTCATATTAGTTGTTTTT+AGG | + | chr8.4:309922-309941 | MS.gene43473:intron | 20.0% |
| !!! | TTCTTTTTGACAAATGATTT+AGG | - | chr8.4:310431-310450 | None:intergenic | 20.0% |
| !!! | TTTATTTTGGAATATTGAGT+GGG | + | chr8.4:308430-308449 | MS.gene43473:intron | 20.0% |
| !!! | TTTTATTTTGGAATATTGAG+TGG | + | chr8.4:308429-308448 | MS.gene43473:intron | 20.0% |
| ! | AACCTGTAACTTATATCATT+TGG | + | chr8.4:309717-309736 | MS.gene43473:intron | 25.0% |
| ! | AAGATTAATTAACTGTTGTC+AGG | + | chr8.4:306779-306798 | MS.gene43473:intron | 25.0% |
| ! | ACTTAAGAAAAAGAAGACAT+CGG | + | chr8.4:308398-308417 | MS.gene43473:intron | 25.0% |
| ! | AGACATTTCTATATTTACTG+TGG | - | chr8.4:306445-306464 | None:intergenic | 25.0% |
| ! | AGATTAATTAACTGTTGTCA+GGG | + | chr8.4:306780-306799 | MS.gene43473:intron | 25.0% |
| ! | AGTTCTTTCAAACATTGATA+CGG | - | chr8.4:309882-309901 | None:intergenic | 25.0% |
| ! | ATATAGGATACGATACATTT+AGG | + | chr8.4:308239-308258 | MS.gene43473:intron | 25.0% |
| ! | CAGTAAATATAGAAATGTCT+AGG | + | chr8.4:306445-306464 | MS.gene43473:intron | 25.0% |
| ! | GAAATTATCAATTTGAGCTT+GGG | + | chr8.4:308999-309018 | MS.gene43473:intron | 25.0% |
| ! | GATAAGTAATATAAGTAGGT+AGG | - | chr8.4:307520-307539 | None:intergenic | 25.0% |
| ! | GTTATTGTCAATGGTTTATA+TGG | + | chr8.4:307217-307236 | MS.gene43473:intron | 25.0% |
| ! | TACCAAATGATATAAGTTAC+AGG | - | chr8.4:309722-309741 | None:intergenic | 25.0% |
| ! | TAGATATCAAAATGTGTCTT+TGG | + | chr8.4:306545-306564 | MS.gene43473:intron | 25.0% |
| ! | TAGTTAATAAATTGGCATTC+TGG | + | chr8.4:306681-306700 | MS.gene43473:intron | 25.0% |
| ! | TGAAATTATCAATTTGAGCT+TGG | + | chr8.4:308998-309017 | MS.gene43473:intron | 25.0% |
| ! | TGTAAAAAACATAACTTCAG+TGG | - | chr8.4:310587-310606 | None:intergenic | 25.0% |
| ! | TTTCTTACGATTATTGTAAG+TGG | + | chr8.4:307651-307670 | MS.gene43473:intron | 25.0% |
| !! | AAAATGTGTCTTTGGAAAAT+TGG | + | chr8.4:306553-306572 | MS.gene43473:intron | 25.0% |
| !! | AAATGTGTCTTTGGAAAATT+GGG | + | chr8.4:306554-306573 | MS.gene43473:intron | 25.0% |
| !! | AATGCACATTTGACATATTT+TGG | + | chr8.4:307431-307450 | MS.gene43473:intron | 25.0% |
| !! | ATGTGTCTGTACATTTTTAA+TGG | + | chr8.4:307403-307422 | MS.gene43473:intron | 25.0% |
| !! | CTAATTTGCAAGGAAAATAA+TGG | - | chr8.4:308705-308724 | None:intergenic | 25.0% |
| !! | GTAACAAGTTTAGAGAATTT+TGG | + | chr8.4:309461-309480 | MS.gene43473:intron | 25.0% |
| !! | TTCAGTGTTGAAACATTATT+AGG | + | chr8.4:306622-306641 | MS.gene43473:intron | 25.0% |
| !!! | AAACTTGTTACTACATATTC+TGG | - | chr8.4:309452-309471 | None:intergenic | 25.0% |
| !!! | ACATTTGACATATTTTGGAT+AGG | + | chr8.4:307436-307455 | MS.gene43473:intron | 25.0% |
| !!! | AGAATTTTGGTTTCATCATT+CGG | + | chr8.4:309474-309493 | MS.gene43473:intron | 25.0% |
| !!! | ATTAATTGTGCAAAAGTACT+TGG | - | chr8.4:308777-308796 | None:intergenic | 25.0% |
| !!! | ATTATTTTCAAGTCCATCAA+GGG | - | chr8.4:309050-309069 | None:intergenic | 25.0% |
| !!! | CATTTGACATATTTTGGATA+GGG | + | chr8.4:307437-307456 | MS.gene43473:intron | 25.0% |
| !!! | CTTAACCATTTTCAAGAAAA+AGG | + | chr8.4:307743-307762 | MS.gene43473:intron | 25.0% |
| !!! | TTGAAGGATTTTATTTTCAC+TGG | - | chr8.4:307777-307796 | None:intergenic | 25.0% |
| !!! | TTGTATAATGTTTTAAGTGC+AGG | - | chr8.4:308491-308510 | None:intergenic | 25.0% |
| AAACAGACTGTTCAAAATGT+TGG | + | chr8.4:306747-306766 | MS.gene43473:intron | 30.0% | |
| AAAGAGATGACATAGTGTTA+TGG | - | chr8.4:306077-306096 | None:intergenic | 30.0% | |
| AATCGTATTCACTAGTATTG+TGG | - | chr8.4:308662-308681 | None:intergenic | 30.0% | |
| ACATCTTCTTGTAACACTAA+AGG | - | chr8.4:307006-307025 | None:intergenic | 30.0% | |
| AGAAGATGTGAAAAAGGTTT+CGG | + | chr8.4:307017-307036 | MS.gene43473:intron | 30.0% | |
| AGTTAATAGTTATGCCCTAT+GGG | + | chr8.4:307978-307997 | MS.gene43473:intron | 30.0% | |
| ATAAGCTCGCAATTAAGTTA+TGG | + | chr8.4:310037-310056 | MS.gene43473:intron | 30.0% | |
| ATCACCAATTTCTGTAAACT+TGG | - | chr8.4:308739-308758 | None:intergenic | 30.0% | |
| ATCGTATTCACTAGTATTGT+GGG | - | chr8.4:308661-308680 | None:intergenic | 30.0% | |
| CATTCAACAATCCATCTTTA+AGG | - | chr8.4:307561-307580 | None:intergenic | 30.0% | |
| GATTCAATACATATCCGATA+TGG | + | chr8.4:308191-308210 | MS.gene43473:intron | 30.0% | |
| GCTAGATATCATAGAGTTAA+TGG | - | chr8.4:306602-306621 | None:intergenic | 30.0% | |
| GTTACAAGAAGATGTGAAAA+AGG | + | chr8.4:307011-307030 | MS.gene43473:CDS | 30.0% | |
| TAAGCTCGCAATTAAGTTAT+GGG | + | chr8.4:310038-310057 | MS.gene43473:intron | 30.0% | |
| TAGTCAACTATATTCTCTCT+TGG | + | chr8.4:309657-309676 | MS.gene43473:intron | 30.0% | |
| TAGTTAATAGTTATGCCCTA+TGG | + | chr8.4:307977-307996 | MS.gene43473:intron | 30.0% | |
| TCATTTGCATGTTTATTCTC+TGG | - | chr8.4:308334-308353 | None:intergenic | 30.0% | |
| TCTGCTAGTAATAAATCATC+AGG | - | chr8.4:310686-310705 | None:intergenic | 30.0% | |
| TTGAAACATTATTAGGACAC+AGG | + | chr8.4:306629-306648 | MS.gene43473:intron | 30.0% | |
| ! | AAGAGTCTAAAATCATGTTG+AGG | + | chr8.4:307291-307310 | MS.gene43473:intron | 30.0% |
| ! | AATGTGTCTTTGGAAAATTG+GGG | + | chr8.4:306555-306574 | MS.gene43473:intron | 30.0% |
| ! | ATGGTAATCAGAGTTTTTGA+AGG | - | chr8.4:307793-307812 | None:intergenic | 30.0% |
| ! | CATCACCTTTTTCTTGAAAA+TGG | - | chr8.4:307751-307770 | None:intergenic | 30.0% |
| ! | CCTGAAAATTTTGCACTTTT+GGG | + | chr8.4:310274-310293 | MS.gene43473:intron | 30.0% |
| ! | GCATTTAAAATTTAGTGCCT+AGG | + | chr8.4:308055-308074 | MS.gene43473:intron | 30.0% |
| ! | TATACCAGTTAGTTTCAGAA+AGG | - | chr8.4:309523-309542 | None:intergenic | 30.0% |
| ! | TCAGCTAATGATCATTGTTT+TGG | - | chr8.4:306351-306370 | None:intergenic | 30.0% |
| ! | TTTTATCAAGACTCTGTCAT+TGG | - | chr8.4:307355-307374 | None:intergenic | 30.0% |
| !! | AAAATTTTCAGGCATCAAAG+GGG | - | chr8.4:310266-310285 | None:intergenic | 30.0% |
| !! | ATAAAAGTGCTCGTGTTATT+TGG | + | chr8.4:307369-307388 | MS.gene43473:intron | 30.0% |
| !! | ATTTGTTTGTTTGTTTCTGC+AGG | + | chr8.4:305646-305665 | MS.gene43473:CDS | 30.0% |
| !! | CAAAATTTTCAGGCATCAAA+GGG | - | chr8.4:310267-310286 | None:intergenic | 30.0% |
| !! | CTTAAAGATGGATTGTTGAA+TGG | + | chr8.4:307559-307578 | MS.gene43473:CDS | 30.0% |
| !! | TGAACTTAACTTGTGACATA+AGG | + | chr8.4:309855-309874 | MS.gene43473:intron | 30.0% |
| !! | TTAGTTTAGTGAGAGTGTTA+TGG | + | chr8.4:307138-307157 | MS.gene43473:intron | 30.0% |
| !!! | AGTTTTCTGCCTTTTTTTAG+AGG | - | chr8.4:307859-307878 | None:intergenic | 30.0% |
| !!! | CATTATTTTCAAGTCCATCA+AGG | - | chr8.4:309051-309070 | None:intergenic | 30.0% |
| !!! | CTAATGATCATTGTTTTGGA+AGG | - | chr8.4:306347-306366 | None:intergenic | 30.0% |
| !!! | GTTTTCTGCCTTTTTTTAGA+GGG | - | chr8.4:307858-307877 | None:intergenic | 30.0% |
| !!! | TGTTTTAAGGTCCTTAAAGA+TGG | + | chr8.4:307547-307566 | MS.gene43473:intron | 30.0% |
| AAAACAGAGCATGAGGTAAT+TGG | + | chr8.4:308535-308554 | MS.gene43473:intron | 35.0% | |
| AAAGCAATATCTTCCTCTCT+TGG | + | chr8.4:305846-305865 | MS.gene43473:CDS | 35.0% | |
| AAATGCTAACAAGTGTCCTA+AGG | + | chr8.4:310061-310080 | MS.gene43473:intron | 35.0% | |
| AAGAAAAAGAAGACATCGGT+TGG | + | chr8.4:308402-308421 | MS.gene43473:intron | 35.0% | |
| AAGAGAGGAAGATATTGCTT+TGG | - | chr8.4:305847-305866 | None:intergenic | 35.0% | |
| AAGCAATATCTTCCTCTCTT+GGG | + | chr8.4:305847-305866 | MS.gene43473:CDS | 35.0% | |
| AAGGAGACTATGAGATTCTA+TGG | - | chr8.4:307812-307831 | None:intergenic | 35.0% | |
| AATGCTAACAAGTGTCCTAA+GGG | + | chr8.4:310062-310081 | MS.gene43473:intron | 35.0% | |
| ACAGCCAAGTTTACAGAAAT+TGG | + | chr8.4:308732-308751 | MS.gene43473:intron | 35.0% | |
| ACTAGTATTGTGGGATTTAC+TGG | - | chr8.4:308652-308671 | None:intergenic | 35.0% | |
| ACTGGATAGAAAAACGCTAT+GGG | + | chr8.4:309126-309145 | MS.gene43473:CDS | 35.0% | |
| AGAAGATTCCGATATATGGT+CGG | + | chr8.4:307941-307960 | MS.gene43473:intron | 35.0% | |
| AGACAGGATTCTGTTTACAA+TGG | + | chr8.4:306194-306213 | MS.gene43473:CDS | 35.0% | |
| AGGATCTTATACCAACATCA+AGG | + | chr8.4:309634-309653 | MS.gene43473:CDS | 35.0% | |
| AGTGTTATGGAAGAAAGAAG+AGG | - | chr8.4:306064-306083 | None:intergenic | 35.0% | |
| ATAGTTGACTACCTTGATGT+TGG | - | chr8.4:309648-309667 | None:intergenic | 35.0% | |
| ATATGATTCCTTAGTCTCTG+TGG | - | chr8.4:308598-308617 | None:intergenic | 35.0% | |
| ATTCCTTAACAAATGCCCTA+AGG | + | chr8.4:310200-310219 | MS.gene43473:intron | 35.0% | |
| CAACTATATTCTCTCTTGGT+AGG | + | chr8.4:309661-309680 | MS.gene43473:intron | 35.0% | |
| CACAGATACAATACGAGTAT+CGG | + | chr8.4:308169-308188 | MS.gene43473:intron | 35.0% | |
| GAGACTAAGGAATCATATCA+AGG | + | chr8.4:308600-308619 | MS.gene43473:intron | 35.0% | |
| GATAGCTCTTGGTTCATATA+GGG | - | chr8.4:309389-309408 | None:intergenic | 35.0% | |
| GATGTTGGTATAAGATCCTT+CGG | - | chr8.4:309633-309652 | None:intergenic | 35.0% | |
| GTAGTAGTACAGCTACTATA+TGG | + | chr8.4:309757-309776 | MS.gene43473:intron | 35.0% | |
| GTATTGTATCTGTGCATCAT+AGG | - | chr8.4:308163-308182 | None:intergenic | 35.0% | |
| GTTAACCAAATGGCAAGATT+CGG | - | chr8.4:306385-306404 | None:intergenic | 35.0% | |
| TATATTCTCTCTTGGTAGGA+TGG | + | chr8.4:309665-309684 | MS.gene43473:intron | 35.0% | |
| TCTTCGGCTACTTAAATCTT+AGG | - | chr8.4:307905-307924 | None:intergenic | 35.0% | |
| TGTTCTGACCACAAATGATT+CGG | - | chr8.4:309107-309126 | None:intergenic | 35.0% | |
| TTAACCAAATGGCAAGATTC+GGG | - | chr8.4:306384-306403 | None:intergenic | 35.0% | |
| TTCCTTAACAAATGCCCTAA+GGG | + | chr8.4:310201-310220 | MS.gene43473:intron | 35.0% | |
| TTTAGACTCTTGAGTGACAA+AGG | - | chr8.4:307282-307301 | None:intergenic | 35.0% | |
| ! | AAATTTTGCACTTTTGGGCT+TGG | + | chr8.4:310279-310298 | MS.gene43473:intron | 35.0% |
| ! | AATTTCTTGCCATGTTTTGC+AGG | + | chr8.4:310652-310671 | MS.gene43473:intron | 35.0% |
| ! | AATTTTGCACTTTTGGGCTT+GGG | + | chr8.4:310280-310299 | MS.gene43473:intron | 35.0% |
| ! | ACCAAAGCTAGACTTTTGAA+GGG | - | chr8.4:308122-308141 | None:intergenic | 35.0% |
| ! | ACTACTACTAGAGCATCATA+TGG | - | chr8.4:309745-309764 | None:intergenic | 35.0% |
| ! | AGAGGTATGAAAAGAAACTC+TGG | - | chr8.4:306323-306342 | None:intergenic | 35.0% |
| ! | ATTTAGTCACTTTCCCTTGA+TGG | + | chr8.4:309034-309053 | MS.gene43473:intron | 35.0% |
| ! | GCCTGAAAATTTTGCACTTT+TGG | + | chr8.4:310273-310292 | MS.gene43473:intron | 35.0% |
| ! | TGCATTCTCCCTCTAAAAAA+AGG | + | chr8.4:307847-307866 | MS.gene43473:intron | 35.0% |
| ! | TGTCTGAAATCCAATGTCTT+TGG | + | chr8.4:307323-307342 | MS.gene43473:intron | 35.0% |
| ! | TGTTTGTGTGCTAATTTGCA+AGG | - | chr8.4:308715-308734 | None:intergenic | 35.0% |
| !! | AAATTTTCAGGCATCAAAGG+GGG | - | chr8.4:310265-310284 | None:intergenic | 35.0% |
| !! | AAGGCTTTGAGCTTGTAAAT+AGG | + | chr8.4:309275-309294 | MS.gene43473:CDS | 35.0% |
| !! | CCCAAAAGTGCAAAATTTTC+AGG | - | chr8.4:310277-310296 | None:intergenic | 35.0% |
| !! | GCAAAATTTTCAGGCATCAA+AGG | - | chr8.4:310268-310287 | None:intergenic | 35.0% |
| !! | GGTTCTATTCTAAAGTGCAT+AGG | + | chr8.4:308033-308052 | MS.gene43473:intron | 35.0% |
| !! | TTTAGTGAGAGTGTTATGGA+AGG | + | chr8.4:307142-307161 | MS.gene43473:intron | 35.0% |
| !! | TTTCTTTGACTTGAAGCATG+CGG | - | chr8.4:305988-306007 | None:intergenic | 35.0% |
| !!! | ATCATTGTTTTGGAAGGAAG+AGG | - | chr8.4:306341-306360 | None:intergenic | 35.0% |
| !!! | CTCATGCTCTGTTTTTTCTT+CGG | - | chr8.4:308530-308549 | None:intergenic | 35.0% |
| !!! | TTTTGGAATATTGAGTGGGT+TGG | + | chr8.4:308434-308453 | MS.gene43473:intron | 35.0% |
| AATTTCCTTTGGCATCTGAG+GGG | - | chr8.4:306136-306155 | None:intergenic | 40.0% | |
| ACATATCACTGCTTGTAGGT+GGG | - | chr8.4:307171-307190 | None:intergenic | 40.0% | |
| ACCTTGAAAGATGTCGTTGT+AGG | - | chr8.4:306032-306051 | None:intergenic | 40.0% | |
| ACGTAACTGCTTTACAACTG+TGG | + | chr8.4:308873-308892 | MS.gene43473:intron | 40.0% | |
| ACGTACCTATAGAGTGCAAT+GGG | - | chr8.4:305877-305896 | None:intergenic | 40.0% | |
| ACTGAATACCTCCTTGATTG+TGG | - | chr8.4:307614-307633 | None:intergenic | 40.0% | |
| AGAAAACAGCACATTCCTGA+AGG | - | chr8.4:306220-306239 | None:intergenic | 40.0% | |
| AGCAGTTACGTAACTGTGAA+TGG | - | chr8.4:308864-308883 | None:intergenic | 40.0% | |
| AGGAAGATATTGCTTTGGCA+TGG | - | chr8.4:305842-305861 | None:intergenic | 40.0% | |
| ATCATTTGTGGTCAGAACAC+TGG | + | chr8.4:309108-309127 | MS.gene43473:CDS | 40.0% | |
| CAATATGTCTGGATAGCTCT+TGG | - | chr8.4:309400-309419 | None:intergenic | 40.0% | |
| CAATTTCCTTTGGCATCTGA+GGG | - | chr8.4:306137-306156 | None:intergenic | 40.0% | |
| CACTGGATAGAAAAACGCTA+TGG | + | chr8.4:309125-309144 | MS.gene43473:CDS | 40.0% | |
| CGAAGAAAAAACAGAGCATG+AGG | + | chr8.4:308528-308547 | MS.gene43473:intron | 40.0% | |
| CGGAACAATGTTGAGAAGAT+AGG | + | chr8.4:309494-309513 | MS.gene43473:intron | 40.0% | |
| CTACAAGCAGTGATATGTCA+GGG | + | chr8.4:307173-307192 | MS.gene43473:intron | 40.0% | |
| CTGTAAGCTAATCTTTCTGC+AGG | + | chr8.4:309075-309094 | MS.gene43473:intron | 40.0% | |
| GAGGAGAAGATTCCGATATA+TGG | + | chr8.4:307937-307956 | MS.gene43473:intron | 40.0% | |
| GGATAGCTCTTGGTTCATAT+AGG | - | chr8.4:309390-309409 | None:intergenic | 40.0% | |
| GTTTATCCCGTTAACACTCA+TGG | + | chr8.4:306898-306917 | MS.gene43473:intron | 40.0% | |
| TAAGGAGCCATGAGTGTTAA+CGG | - | chr8.4:306908-306927 | None:intergenic | 40.0% | |
| TACAACCTTCTTTGCAGAGA+AGG | + | chr8.4:309548-309567 | MS.gene43473:intron | 40.0% | |
| TACGTACCTATAGAGTGCAA+TGG | - | chr8.4:305878-305897 | None:intergenic | 40.0% | |
| TACTGACGATGTTTCCATTG+TGG | + | chr8.4:309580-309599 | MS.gene43473:CDS | 40.0% | |
| TATGCTAACAAGTGCCCTTA+GGG | - | chr8.4:310218-310237 | None:intergenic | 40.0% | |
| TCCTACAACGACATCTTTCA+AGG | + | chr8.4:306028-306047 | MS.gene43473:CDS | 40.0% | |
| TGAAAGATGTCGTTGTAGGA+AGG | - | chr8.4:306028-306047 | None:intergenic | 40.0% | |
| TGGGCTTATGAGAATTGAGA+GGG | + | chr8.4:309823-309842 | MS.gene43473:intron | 40.0% | |
| TTACCATGAATGACTCACCT+GGG | - | chr8.4:309427-309446 | None:intergenic | 40.0% | |
| TTATGCTAACAAGTGCCCTT+AGG | - | chr8.4:310219-310238 | None:intergenic | 40.0% | |
| TTCTGTTTACAATGGCCTTC+AGG | + | chr8.4:306202-306221 | MS.gene43473:CDS | 40.0% | |
| TTGGGCTTATGAGAATTGAG+AGG | + | chr8.4:309822-309841 | MS.gene43473:intron | 40.0% | |
| TTTACCATGAATGACTCACC+TGG | - | chr8.4:309428-309447 | None:intergenic | 40.0% | |
| ! | ATGTTTAAGGTGCTCCACAA+TGG | - | chr8.4:309597-309616 | None:intergenic | 40.0% |
| ! | GAATCCTGTCTTTCTTTTCC+AGG | - | chr8.4:306185-306204 | None:intergenic | 40.0% |
| ! | GACCAAAGCTAGACTTTTGA+AGG | - | chr8.4:308123-308142 | None:intergenic | 40.0% |
| !! | CCAAAGCTAGACTTTTGAAG+GGG | - | chr8.4:308121-308140 | None:intergenic | 40.0% |
| !! | CTGCAGAAAGATTAGCTTAC+AGG | - | chr8.4:309077-309096 | None:intergenic | 40.0% |
| !! | GAAATGAGGTATCGCCATAT+CGG | - | chr8.4:308208-308227 | None:intergenic | 40.0% |
| !! | GTTGCCTTTCTGAAACTAAC+TGG | + | chr8.4:309516-309535 | MS.gene43473:intron | 40.0% |
| !! | TTCTTTGACTTGAAGCATGC+GGG | - | chr8.4:305987-306006 | None:intergenic | 40.0% |
| !! | TTGTTTGTTTCTGCAGGAAC+AGG | + | chr8.4:305652-305671 | MS.gene43473:CDS | 40.0% |
| !!! | TCGGTTGGACCGTTTTATTT+TGG | + | chr8.4:308417-308436 | MS.gene43473:intron | 40.0% |
| AAAGCCTTTCCTCAGCAACT+CGG | - | chr8.4:309263-309282 | None:intergenic | 45.0% | |
| AAGGAGCCATGAGTGTTAAC+GGG | - | chr8.4:306907-306926 | None:intergenic | 45.0% | |
| ACCTATAGAGTGCAATGGGT+TGG | - | chr8.4:305873-305892 | None:intergenic | 45.0% | |
| ACTGCCTGGAAAAGAAAGAC+AGG | + | chr8.4:306178-306197 | MS.gene43473:CDS | 45.0% | |
| CAAACCCGAATCTTGCCATT+TGG | + | chr8.4:306377-306396 | MS.gene43473:intron | 45.0% | |
| CAAGACCTTCTCTGCAAAGA+AGG | - | chr8.4:309556-309575 | None:intergenic | 45.0% | |
| CATCTTTGCAGTTTGACCTG+TGG | - | chr8.4:309163-309182 | None:intergenic | 45.0% | |
| CCTACAAGCAGTGATATGTC+AGG | + | chr8.4:307172-307191 | MS.gene43473:intron | 45.0% | |
| CCTGACATATCACTGCTTGT+AGG | - | chr8.4:307175-307194 | None:intergenic | 45.0% | |
| CTGCAAAGAACTGTGATGCA+CGG | - | chr8.4:308566-308585 | None:intergenic | 45.0% | |
| CTTTCTCTGACGTGCTTAGT+CGG | - | chr8.4:309799-309818 | None:intergenic | 45.0% | |
| GACATATCACTGCTTGTAGG+TGG | - | chr8.4:307172-307191 | None:intergenic | 45.0% | |
| GACTTGGATAACAGCGATCT+TGG | + | chr8.4:310523-310542 | MS.gene43473:intron | 45.0% | |
| GCAATTTCCTTTGGCATCTG+AGG | - | chr8.4:306138-306157 | None:intergenic | 45.0% | |
| GCTTCTTATCAAGTGCCCTT+AGG | - | chr8.4:310080-310099 | None:intergenic | 45.0% | |
| GCTTGGGCGTAACTTATCTT+GGG | + | chr8.4:310296-310315 | MS.gene43473:intron | 45.0% | |
| GGCAAACACCGAATCATTTG+TGG | + | chr8.4:309096-309115 | MS.gene43473:intron | 45.0% | |
| GTATGGGCACGTTAACCAAA+TGG | - | chr8.4:306395-306414 | None:intergenic | 45.0% | |
| GTCTGGTTGGCAATTTCCTT+TGG | - | chr8.4:306147-306166 | None:intergenic | 45.0% | |
| TAGGCAGTCCGACCATATAT+CGG | - | chr8.4:307952-307971 | None:intergenic | 45.0% | |
| TCTCTCTTGGTAGGATGGTT+AGG | + | chr8.4:309670-309689 | MS.gene43473:intron | 45.0% | |
| TGAGGTGGCAAAAGAAAGGT+TGG | + | chr8.4:308012-308031 | MS.gene43473:intron | 45.0% | |
| TTATCAAACCCGAGTTGCTG+AGG | + | chr8.4:309251-309270 | MS.gene43473:CDS | 45.0% | |
| TTCCAGGCAGTGCAAATTTG+AGG | - | chr8.4:306169-306188 | None:intergenic | 45.0% | |
| TTGAATGGAGCTGCTGTTCT+TGG | + | chr8.4:307574-307593 | MS.gene43473:CDS | 45.0% | |
| TTGGCAATCGCCAAAGACAT+TGG | - | chr8.4:307336-307355 | None:intergenic | 45.0% | |
| TTTCTCTGACGTGCTTAGTC+GGG | - | chr8.4:309798-309817 | None:intergenic | 45.0% | |
| ! | CCCCTTCAAAAGTCTAGCTT+TGG | + | chr8.4:308118-308137 | MS.gene43473:intron | 45.0% |
| ! | CTTTGGAAAATTGGGGAGCA+CGG | + | chr8.4:306562-306581 | MS.gene43473:intron | 45.0% |
| ! | GTGCAAATTTGAGGTCTGGT+TGG | - | chr8.4:306160-306179 | None:intergenic | 45.0% |
| ! | TGCCCTTAGGGCATTTGTTA+AGG | - | chr8.4:310206-310225 | None:intergenic | 45.0% |
| ! | TTTTCCTGCCACAGAGACTA+AGG | + | chr8.4:308587-308606 | MS.gene43473:intron | 45.0% |
| !! | AGCACGTCAGAGAAAGCATT+TGG | + | chr8.4:309803-309822 | MS.gene43473:intron | 45.0% |
| !! | ATGAGAATTGAGAGGGCGTT+TGG | + | chr8.4:309830-309849 | MS.gene43473:intron | 45.0% |
| !! | CTAGACTTTTGAAGGGGTGT+TGG | - | chr8.4:308115-308134 | None:intergenic | 45.0% |
| !! | GCACGTCAGAGAAAGCATTT+GGG | + | chr8.4:309804-309823 | MS.gene43473:intron | 45.0% |
| !! | GAATAAATAATAATATTAAT+AGG | - | chr8.4:306108-306127 | None:intergenic | 5.0% |
| AAACCCGAGTTGCTGAGGAA+AGG | + | chr8.4:309256-309275 | MS.gene43473:CDS | 50.0% | |
| AAGCCTTTCCTCAGCAACTC+GGG | - | chr8.4:309262-309281 | None:intergenic | 50.0% | |
| ACCTGGGTGGTCAATATGTC+TGG | - | chr8.4:309411-309430 | None:intergenic | 50.0% | |
| CAGGCATCAAAGGGGGAATT+TGG | - | chr8.4:310258-310277 | None:intergenic | 50.0% | |
| CCACTGAGGTGGCAAAAGAA+AGG | + | chr8.4:308008-308027 | MS.gene43473:intron | 50.0% | |
| CCTTGATTGTGGCCTTCACA+GGG | - | chr8.4:307603-307622 | None:intergenic | 50.0% | |
| GACCTCAAATTTGCACTGCC+TGG | + | chr8.4:306164-306183 | MS.gene43473:CDS | 50.0% | |
| GATTCCTTAGTCTCTGTGGC+AGG | - | chr8.4:308594-308613 | None:intergenic | 50.0% | |
| GCCAACCCATTGCACTCTAT+AGG | + | chr8.4:305869-305888 | MS.gene43473:CDS | 50.0% | |
| GCGTAGTCACCTGCAAAACA+TGG | - | chr8.4:310664-310683 | None:intergenic | 50.0% | |
| GGCTTGGGCGTAACTTATCT+TGG | + | chr8.4:310295-310314 | MS.gene43473:intron | 50.0% | |
| GGGCGTAACTTATCTTGGGT+TGG | + | chr8.4:310300-310319 | MS.gene43473:intron | 50.0% | |
| GTTTCTGCAGGAACAGGAGA+AGG | + | chr8.4:305658-305677 | MS.gene43473:CDS | 50.0% | |
| TCCAGACATATTGACCACCC+AGG | + | chr8.4:309407-309426 | MS.gene43473:intron | 50.0% | |
| TCCTTGATTGTGGCCTTCAC+AGG | - | chr8.4:307604-307623 | None:intergenic | 50.0% | |
| TCGGAATCTTCTCCTCTGCA+TGG | - | chr8.4:307933-307952 | None:intergenic | 50.0% | |
| TGTGAAGGCCACAATCAAGG+AGG | + | chr8.4:307603-307622 | MS.gene43473:CDS | 50.0% | |
| ! | CCTTTCTTTTGCCACCTCAG+TGG | - | chr8.4:308011-308030 | None:intergenic | 50.0% |
| ! | GGCAGTGCAAATTTGAGGTC+TGG | - | chr8.4:306164-306183 | None:intergenic | 50.0% |
| !! | TAGTGCCTAGGCACTGAAGT+GGG | + | chr8.4:308067-308086 | MS.gene43473:intron | 50.0% |
| !! | TGTTCTTGGTGTCCCTGTGA+AGG | + | chr8.4:307588-307607 | MS.gene43473:CDS | 50.0% |
| !! | TTAGTGCCTAGGCACTGAAG+TGG | + | chr8.4:308066-308085 | MS.gene43473:intron | 50.0% |
| ACGTGCTTAGTCGGGTCAAG+TGG | - | chr8.4:309790-309809 | None:intergenic | 55.0% | |
| ATGGGAGATGCAGACTCCAC+AGG | + | chr8.4:309144-309163 | MS.gene43473:CDS | 55.0% | |
| CCACCCAGGTGAGTCATTCA+TGG | + | chr8.4:309421-309440 | MS.gene43473:intron | 55.0% | |
| CCATGAATGACTCACCTGGG+TGG | - | chr8.4:309424-309443 | None:intergenic | 55.0% | |
| CCCTGTGAAGGCCACAATCA+AGG | + | chr8.4:307600-307619 | MS.gene43473:CDS | 55.0% | |
| CCTCTGCATGGTGTGCTCTT+CGG | - | chr8.4:307921-307940 | None:intergenic | 55.0% | |
| CGTGCTTAGTCGGGTCAAGT+GGG | - | chr8.4:309789-309808 | None:intergenic | 55.0% | |
| GGAGGGAAGGGCAAGAGAAT+GGG | + | chr8.4:305725-305744 | MS.gene43473:CDS | 55.0% | |
| TCAGTGGCTAGGCACCCATA+GGG | - | chr8.4:307995-308014 | None:intergenic | 55.0% | |
| TCCTTTGGCATCTGAGGGGA+GGG | - | chr8.4:306132-306151 | None:intergenic | 55.0% | |
| TGCACAGCACACTCAACGCA+AGG | - | chr8.4:307831-307850 | None:intergenic | 55.0% | |
| TGGAGGGAAGGGCAAGAGAA+TGG | + | chr8.4:305724-305743 | MS.gene43473:CDS | 55.0% | |
| TTCCTTTGGCATCTGAGGGG+AGG | - | chr8.4:306133-306152 | None:intergenic | 55.0% | |
| ! | CTTTTGCCACCTCAGTGGCT+AGG | - | chr8.4:308006-308025 | None:intergenic | 55.0% |
| CCCTCCAGCGAGCAGTACAA+CGG | - | chr8.4:305711-305730 | None:intergenic | 60.0% | |
| CCGTTGTACTGCTCGCTGGA+GGG | + | chr8.4:305708-305727 | MS.gene43473:CDS | 60.0% | |
| CCTCACCCACTTCAGTGCCT+AGG | - | chr8.4:308075-308094 | None:intergenic | 60.0% | |
| CCTTTGGCATCTGAGGGGAG+GGG | - | chr8.4:306131-306150 | None:intergenic | 60.0% | |
| CTATGGGTGCCTAGCCACTG+AGG | + | chr8.4:307994-308013 | MS.gene43473:intron | 60.0% | |
| CTCAGTGGCTAGGCACCCAT+AGG | - | chr8.4:307996-308015 | None:intergenic | 60.0% | |
| CTTTGGCATCTGAGGGGAGG+GGG | - | chr8.4:306130-306149 | None:intergenic | 60.0% | |
| GTACTGCTCGCTGGAGGGAA+GGG | + | chr8.4:305713-305732 | MS.gene43473:CDS | 60.0% | |
| GTCTCCGTTGTACTGCTCGC+TGG | + | chr8.4:305704-305723 | MS.gene43473:CDS | 60.0% | |
| TCCGTTGTACTGCTCGCTGG+AGG | + | chr8.4:305707-305726 | MS.gene43473:CDS | 60.0% | |
| TGTACTGCTCGCTGGAGGGA+AGG | + | chr8.4:305712-305731 | MS.gene43473:CDS | 60.0% | |
| ! | CCGAAGAGCACACCATGCAG+AGG | + | chr8.4:307918-307937 | MS.gene43473:intron | 60.0% |
| !! | CCTAGGCACTGAAGTGGGTG+AGG | + | chr8.4:308072-308091 | MS.gene43473:intron | 60.0% |
| !! | GCAATGGGTTGGCCCAAGAG+AGG | - | chr8.4:305862-305881 | None:intergenic | 60.0% |
| CCCCTCCCCTCAGATGCCAA+AGG | + | chr8.4:306128-306147 | MS.gene43473:intron | 65.0% | |
| TGGGTGCCTAGCCACTGAGG+TGG | + | chr8.4:307997-308016 | MS.gene43473:intron | 65.0% | |
| ! | GGCACTGAAGTGGGTGAGGC+AGG | + | chr8.4:308076-308095 | MS.gene43473:intron | 65.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr8.4 | gene | 305629 | 310742 | 305629 | ID=MS.gene43473 |
| chr8.4 | mRNA | 305629 | 310742 | 305629 | ID=MS.gene43473.t1;Parent=MS.gene43473 |
| chr8.4 | exon | 305629 | 305748 | 305629 | ID=MS.gene43473.t1.exon1;Parent=MS.gene43473.t1 |
| chr8.4 | CDS | 305629 | 305748 | 305629 | ID=cds.MS.gene43473.t1;Parent=MS.gene43473.t1 |
| chr8.4 | exon | 305835 | 305890 | 305835 | ID=MS.gene43473.t1.exon2;Parent=MS.gene43473.t1 |
| chr8.4 | CDS | 305835 | 305890 | 305835 | ID=cds.MS.gene43473.t1;Parent=MS.gene43473.t1 |
| chr8.4 | exon | 305970 | 306049 | 305970 | ID=MS.gene43473.t1.exon3;Parent=MS.gene43473.t1 |
| chr8.4 | CDS | 305970 | 306049 | 305970 | ID=cds.MS.gene43473.t1;Parent=MS.gene43473.t1 |
| chr8.4 | exon | 306141 | 306232 | 306141 | ID=MS.gene43473.t1.exon4;Parent=MS.gene43473.t1 |
| chr8.4 | CDS | 306141 | 306232 | 306141 | ID=cds.MS.gene43473.t1;Parent=MS.gene43473.t1 |
| chr8.4 | exon | 306955 | 307032 | 306955 | ID=MS.gene43473.t1.exon5;Parent=MS.gene43473.t1 |
| chr8.4 | CDS | 306955 | 307032 | 306955 | ID=cds.MS.gene43473.t1;Parent=MS.gene43473.t1 |
| chr8.4 | exon | 307556 | 307624 | 307556 | ID=MS.gene43473.t1.exon6;Parent=MS.gene43473.t1 |
| chr8.4 | CDS | 307556 | 307624 | 307556 | ID=cds.MS.gene43473.t1;Parent=MS.gene43473.t1 |
| chr8.4 | exon | 309097 | 309165 | 309097 | ID=MS.gene43473.t1.exon7;Parent=MS.gene43473.t1 |
| chr8.4 | CDS | 309097 | 309165 | 309097 | ID=cds.MS.gene43473.t1;Parent=MS.gene43473.t1 |
| chr8.4 | exon | 309250 | 309296 | 309250 | ID=MS.gene43473.t1.exon8;Parent=MS.gene43473.t1 |
| chr8.4 | CDS | 309250 | 309296 | 309250 | ID=cds.MS.gene43473.t1;Parent=MS.gene43473.t1 |
| chr8.4 | exon | 309565 | 309655 | 309565 | ID=MS.gene43473.t1.exon9;Parent=MS.gene43473.t1 |
| chr8.4 | CDS | 309565 | 309655 | 309565 | ID=cds.MS.gene43473.t1;Parent=MS.gene43473.t1 |
| chr8.4 | exon | 310674 | 310742 | 310674 | ID=MS.gene43473.t1.exon10;Parent=MS.gene43473.t1 |
| chr8.4 | CDS | 310674 | 310742 | 310674 | ID=cds.MS.gene43473.t1;Parent=MS.gene43473.t1 |
| Gene Sequence |
| Protein sequence |
