Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene48370.t1 | XP_013457802.1 | 97.8 | 268 | 4 | 1 | 1 | 268 | 1 | 266 | 1.40E-138 | 502.3 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene48370.t1 | B8IN72 | 52.5 | 120 | 54 | 1 | 138 | 257 | 4 | 120 | 2.5e-27 | 124.0 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene48370.t1 | A0A072URZ9 | 97.8 | 268 | 4 | 1 | 1 | 268 | 1 | 266 | 1.0e-138 | 502.3 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| MS.gene049137 | MS.gene48370 | 0.841222 | 5.42E-58 | -1.69E-46 |
| MS.gene049170 | MS.gene48370 | 0.845702 | 3.44E-59 | -1.69E-46 |
| MS.gene049356 | MS.gene48370 | 0.833678 | 4.65E-56 | -1.69E-46 |
| MS.gene049758 | MS.gene48370 | 0.809489 | 1.84E-50 | -1.69E-46 |
| MS.gene049805 | MS.gene48370 | 0.808016 | 3.81E-50 | -1.69E-46 |
| MS.gene050060 | MS.gene48370 | 0.819159 | 1.34E-52 | -1.69E-46 |
| MS.gene050301 | MS.gene48370 | 0.816858 | 4.45E-52 | -1.69E-46 |
| MS.gene050397 | MS.gene48370 | 0.826304 | 2.92E-54 | -1.69E-46 |
| MS.gene050400 | MS.gene48370 | 0.826981 | 2.01E-54 | -1.69E-46 |
| MS.gene050406 | MS.gene48370 | 0.811594 | 6.48E-51 | -1.69E-46 |
| MS.gene050426 | MS.gene48370 | -0.877788 | 4.75E-69 | -1.69E-46 |
| MS.gene050464 | MS.gene48370 | 0.838413 | 2.92E-57 | -1.69E-46 |
| MS.gene050529 | MS.gene48370 | 0.861528 | 9.63E-64 | -1.69E-46 |
| MS.gene050593 | MS.gene48370 | 0.816945 | 4.26E-52 | -1.69E-46 |
| MS.gene050670 | MS.gene48370 | 0.917044 | 8.57E-86 | -1.69E-46 |
| MS.gene050812 | MS.gene48370 | 0.850796 | 1.35E-60 | -1.69E-46 |
| MS.gene05081 | MS.gene48370 | 0.815399 | 9.43E-52 | -1.69E-46 |
| MS.gene050971 | MS.gene48370 | 0.829665 | 4.53E-55 | -1.69E-46 |
| MS.gene05105 | MS.gene48370 | 0.867682 | 1.14E-65 | -1.69E-46 |
| MS.gene051387 | MS.gene48370 | 0.827942 | 1.18E-54 | -1.69E-46 |
| MS.gene051525 | MS.gene48370 | 0.869991 | 2.04E-66 | -1.69E-46 |
| MS.gene051582 | MS.gene48370 | 0.852622 | 4.09E-61 | -1.69E-46 |
| MS.gene051666 | MS.gene48370 | 0.831372 | 1.73E-55 | -1.69E-46 |
| MS.gene051838 | MS.gene48370 | 0.806356 | 8.56E-50 | -1.69E-46 |
| MS.gene051983 | MS.gene48370 | 0.813508 | 2.47E-51 | -1.69E-46 |
| MS.gene052011 | MS.gene48370 | -0.862404 | 5.19E-64 | -1.69E-46 |
| MS.gene052077 | MS.gene48370 | 0.878203 | 3.40E-69 | -1.69E-46 |
| MS.gene052078 | MS.gene48370 | 0.806224 | 9.13E-50 | -1.69E-46 |
| MS.gene052128 | MS.gene48370 | -0.801896 | 7.25E-49 | -1.69E-46 |
| MS.gene052134 | MS.gene48370 | 0.83663 | 8.36E-57 | -1.69E-46 |
| MS.gene052135 | MS.gene48370 | 0.835256 | 1.86E-56 | -1.69E-46 |
| MS.gene052136 | MS.gene48370 | 0.824235 | 9.01E-54 | -1.69E-46 |
| MS.gene052188 | MS.gene48370 | 0.898489 | 5.04E-77 | -1.69E-46 |
| MS.gene052253 | MS.gene48370 | 0.849052 | 4.14E-60 | -1.69E-46 |
| MS.gene052310 | MS.gene48370 | 0.867653 | 1.17E-65 | -1.69E-46 |
| MS.gene052322 | MS.gene48370 | 0.832745 | 7.93E-56 | -1.69E-46 |
| MS.gene052340 | MS.gene48370 | 0.87425 | 7.82E-68 | -1.69E-46 |
| MS.gene052414 | MS.gene48370 | 0.866496 | 2.73E-65 | -1.69E-46 |
| MS.gene052421 | MS.gene48370 | 0.840575 | 8.01E-58 | -1.69E-46 |
| MS.gene052469 | MS.gene48370 | 0.815238 | 1.02E-51 | -1.69E-46 |
| MS.gene052481 | MS.gene48370 | 0.839218 | 1.81E-57 | -1.69E-46 |
| MS.gene052484 | MS.gene48370 | 0.819192 | 1.32E-52 | -1.69E-46 |
| MS.gene052485 | MS.gene48370 | 0.848546 | 5.72E-60 | -1.69E-46 |
| MS.gene052501 | MS.gene48370 | 0.821987 | 3.01E-53 | -1.69E-46 |
| MS.gene052505 | MS.gene48370 | 0.830342 | 3.10E-55 | -1.69E-46 |
| MS.gene052982 | MS.gene48370 | 0.818863 | 1.57E-52 | -1.69E-46 |
| MS.gene053103 | MS.gene48370 | 0.8227 | 2.06E-53 | -1.69E-46 |
| MS.gene053104 | MS.gene48370 | 0.806582 | 7.67E-50 | -1.69E-46 |
| MS.gene053169 | MS.gene48370 | 0.800173 | 1.63E-48 | -1.69E-46 |
| MS.gene05316 | MS.gene48370 | 0.800473 | 1.42E-48 | -1.69E-46 |
| MS.gene053209 | MS.gene48370 | 0.819105 | 1.38E-52 | -1.69E-46 |
| MS.gene053330 | MS.gene48370 | 0.835495 | 1.62E-56 | -1.69E-46 |
| MS.gene053449 | MS.gene48370 | 0.818965 | 1.49E-52 | -1.69E-46 |
| MS.gene053557 | MS.gene48370 | 0.810511 | 1.11E-50 | -1.69E-46 |
| MS.gene053758 | MS.gene48370 | 0.801423 | 9.07E-49 | -1.69E-46 |
| MS.gene053836 | MS.gene48370 | 0.825171 | 5.42E-54 | -1.69E-46 |
| MS.gene053928 | MS.gene48370 | 0.870167 | 1.79E-66 | -1.69E-46 |
| MS.gene054102 | MS.gene48370 | 0.815458 | 9.15E-52 | -1.69E-46 |
| MS.gene054110 | MS.gene48370 | 0.810117 | 1.35E-50 | -1.69E-46 |
| MS.gene054123 | MS.gene48370 | 0.831361 | 1.74E-55 | -1.69E-46 |
| MS.gene05412 | MS.gene48370 | 0.8011 | 1.06E-48 | -1.69E-46 |
| MS.gene054183 | MS.gene48370 | 0.838385 | 2.97E-57 | -1.69E-46 |
| MS.gene054349 | MS.gene48370 | 0.892462 | 1.55E-74 | -1.69E-46 |
| MS.gene054556 | MS.gene48370 | 0.835949 | 1.25E-56 | -1.69E-46 |
| MS.gene054719 | MS.gene48370 | 0.862943 | 3.54E-64 | -1.69E-46 |
| MS.gene054930 | MS.gene48370 | 0.806799 | 6.90E-50 | -1.69E-46 |
| MS.gene054955 | MS.gene48370 | 0.818883 | 1.55E-52 | -1.69E-46 |
| MS.gene05505 | MS.gene48370 | 0.812612 | 3.88E-51 | -1.69E-46 |
| MS.gene055116 | MS.gene48370 | 0.870556 | 1.33E-66 | -1.69E-46 |
| MS.gene055277 | MS.gene48370 | 0.818763 | 1.65E-52 | -1.69E-46 |
| MS.gene055369 | MS.gene48370 | 0.840115 | 1.06E-57 | -1.69E-46 |
| MS.gene055370 | MS.gene48370 | 0.806435 | 8.24E-50 | -1.69E-46 |
| MS.gene055422 | MS.gene48370 | 0.804216 | 2.40E-49 | -1.69E-46 |
| MS.gene055428 | MS.gene48370 | 0.812042 | 5.17E-51 | -1.69E-46 |
| MS.gene055539 | MS.gene48370 | 0.87682 | 1.03E-68 | -1.69E-46 |
| MS.gene05553 | MS.gene48370 | 0.904412 | 1.26E-79 | -1.69E-46 |
| MS.gene05556 | MS.gene48370 | 0.82548 | 4.58E-54 | -1.69E-46 |
| MS.gene055601 | MS.gene48370 | -0.800751 | 1.24E-48 | -1.69E-46 |
| MS.gene055604 | MS.gene48370 | 0.804631 | 1.97E-49 | -1.69E-46 |
| MS.gene055741 | MS.gene48370 | 0.832078 | 1.16E-55 | -1.69E-46 |
| MS.gene055744 | MS.gene48370 | 0.843427 | 1.41E-58 | -1.69E-46 |
| MS.gene055859 | MS.gene48370 | 0.811074 | 8.40E-51 | -1.69E-46 |
| MS.gene056407 | MS.gene48370 | 0.880979 | 3.51E-70 | -1.69E-46 |
| MS.gene056511 | MS.gene48370 | 0.84691 | 1.61E-59 | -1.69E-46 |
| MS.gene056514 | MS.gene48370 | 0.830792 | 2.41E-55 | -1.69E-46 |
| MS.gene056612 | MS.gene48370 | 0.800339 | 1.51E-48 | -1.69E-46 |
| MS.gene056633 | MS.gene48370 | 0.804989 | 1.66E-49 | -1.69E-46 |
| MS.gene05664 | MS.gene48370 | 0.810855 | 9.37E-51 | -1.69E-46 |
| MS.gene056659 | MS.gene48370 | 0.850436 | 1.70E-60 | -1.69E-46 |
| MS.gene056719 | MS.gene48370 | 0.806374 | 8.49E-50 | -1.69E-46 |
| MS.gene056723 | MS.gene48370 | 0.858194 | 9.74E-63 | -1.69E-46 |
| MS.gene056796 | MS.gene48370 | 0.857501 | 1.56E-62 | -1.69E-46 |
| MS.gene056899 | MS.gene48370 | -0.834612 | 2.71E-56 | -1.69E-46 |
| MS.gene05702 | MS.gene48370 | 0.8555 | 6.05E-62 | -1.69E-46 |
| MS.gene057124 | MS.gene48370 | 0.872602 | 2.80E-67 | -1.69E-46 |
| MS.gene057396 | MS.gene48370 | 0.861885 | 7.49E-64 | -1.69E-46 |
| MS.gene057448 | MS.gene48370 | 0.816827 | 4.52E-52 | -1.69E-46 |
| MS.gene057450 | MS.gene48370 | 0.815156 | 1.07E-51 | -1.69E-46 |
| MS.gene057749 | MS.gene48370 | 0.871493 | 6.55E-67 | -1.69E-46 |
| MS.gene057823 | MS.gene48370 | 0.883353 | 4.82E-71 | -1.69E-46 |
| MS.gene057825 | MS.gene48370 | 0.816219 | 6.19E-52 | -1.69E-46 |
| MS.gene057856 | MS.gene48370 | 0.803772 | 2.97E-49 | -1.69E-46 |
| MS.gene057927 | MS.gene48370 | 0.832625 | 8.50E-56 | -1.69E-46 |
| MS.gene058002 | MS.gene48370 | 0.844936 | 5.55E-59 | -1.69E-46 |
| MS.gene058007 | MS.gene48370 | 0.849906 | 2.39E-60 | -1.69E-46 |
| MS.gene058019 | MS.gene48370 | 0.817515 | 3.17E-52 | -1.69E-46 |
| MS.gene058082 | MS.gene48370 | 0.835126 | 2.01E-56 | -1.69E-46 |
| MS.gene05811 | MS.gene48370 | 0.830519 | 2.81E-55 | -1.69E-46 |
| MS.gene058142 | MS.gene48370 | 0.836916 | 7.07E-57 | -1.69E-46 |
| MS.gene058233 | MS.gene48370 | 0.851385 | 9.19E-61 | -1.69E-46 |
| MS.gene058276 | MS.gene48370 | 0.829041 | 6.43E-55 | -1.69E-46 |
| MS.gene058293 | MS.gene48370 | 0.830626 | 2.64E-55 | -1.69E-46 |
| MS.gene058365 | MS.gene48370 | 0.858349 | 8.75E-63 | -1.69E-46 |
| MS.gene058376 | MS.gene48370 | 0.848736 | 5.07E-60 | -1.69E-46 |
| MS.gene058444 | MS.gene48370 | 0.846808 | 1.72E-59 | -1.69E-46 |
| MS.gene058660 | MS.gene48370 | 0.817245 | 3.64E-52 | -1.69E-46 |
| MS.gene058700 | MS.gene48370 | 0.84632 | 2.34E-59 | -1.69E-46 |
| MS.gene058710 | MS.gene48370 | 0.845566 | 3.75E-59 | -1.69E-46 |
| MS.gene058787 | MS.gene48370 | 0.801069 | 1.07E-48 | -1.69E-46 |
| MS.gene05886 | MS.gene48370 | 0.803193 | 3.92E-49 | -1.69E-46 |
| MS.gene058928 | MS.gene48370 | 0.843581 | 1.28E-58 | -1.69E-46 |
| MS.gene058948 | MS.gene48370 | 0.818179 | 2.24E-52 | -1.69E-46 |
| MS.gene058949 | MS.gene48370 | 0.801093 | 1.06E-48 | -1.69E-46 |
| MS.gene058993 | MS.gene48370 | 0.801112 | 1.05E-48 | -1.69E-46 |
| MS.gene059011 | MS.gene48370 | 0.850868 | 1.29E-60 | -1.69E-46 |
| MS.gene05907 | MS.gene48370 | 0.855604 | 5.65E-62 | -1.69E-46 |
| MS.gene059141 | MS.gene48370 | 0.825505 | 4.52E-54 | -1.69E-46 |
| MS.gene059285 | MS.gene48370 | 0.837206 | 5.96E-57 | -1.69E-46 |
| MS.gene059294 | MS.gene48370 | 0.818681 | 1.73E-52 | -1.69E-46 |
| MS.gene05934 | MS.gene48370 | 0.80524 | 1.47E-49 | -1.69E-46 |
| MS.gene059366 | MS.gene48370 | 0.820244 | 7.60E-53 | -1.69E-46 |
| MS.gene059420 | MS.gene48370 | 0.888199 | 7.30E-73 | -1.69E-46 |
| MS.gene059455 | MS.gene48370 | 0.813956 | 1.97E-51 | -1.69E-46 |
| MS.gene059462 | MS.gene48370 | 0.803588 | 3.24E-49 | -1.69E-46 |
| MS.gene059597 | MS.gene48370 | 0.826499 | 2.62E-54 | -1.69E-46 |
| MS.gene05959 | MS.gene48370 | 0.806058 | 9.89E-50 | -1.69E-46 |
| MS.gene059674 | MS.gene48370 | 0.800002 | 1.77E-48 | -1.69E-46 |
| MS.gene059676 | MS.gene48370 | 0.868746 | 5.19E-66 | -1.69E-46 |
| MS.gene059688 | MS.gene48370 | 0.869344 | 3.32E-66 | -1.69E-46 |
| MS.gene059692 | MS.gene48370 | 0.870742 | 1.16E-66 | -1.69E-46 |
| MS.gene059695 | MS.gene48370 | 0.872162 | 3.93E-67 | -1.69E-46 |
| MS.gene059807 | MS.gene48370 | 0.826661 | 2.40E-54 | -1.69E-46 |
| MS.gene05984 | MS.gene48370 | 0.832659 | 8.33E-56 | -1.69E-46 |
| MS.gene059894 | MS.gene48370 | 0.817138 | 3.85E-52 | -1.69E-46 |
| MS.gene060403 | MS.gene48370 | 0.886199 | 4.21E-72 | -1.69E-46 |
| MS.gene060407 | MS.gene48370 | 0.83299 | 6.90E-56 | -1.69E-46 |
| MS.gene060804 | MS.gene48370 | 0.808173 | 3.53E-50 | -1.69E-46 |
| MS.gene060835 | MS.gene48370 | 0.830125 | 3.50E-55 | -1.69E-46 |
| MS.gene060837 | MS.gene48370 | 0.816402 | 5.63E-52 | -1.69E-46 |
| MS.gene06090 | MS.gene48370 | 0.802721 | 4.90E-49 | -1.69E-46 |
| MS.gene060986 | MS.gene48370 | 0.803884 | 2.82E-49 | -1.69E-46 |
| MS.gene061049 | MS.gene48370 | 0.86019 | 2.45E-63 | -1.69E-46 |
| MS.gene061051 | MS.gene48370 | -0.810233 | 1.28E-50 | -1.69E-46 |
| MS.gene061154 | MS.gene48370 | 0.893413 | 6.44E-75 | -1.69E-46 |
| MS.gene061159 | MS.gene48370 | 0.81645 | 5.49E-52 | -1.69E-46 |
PPI:
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene48370.t1 | MTR_4g105610 | 97.761 | 268 | 4 | 1 | 1 | 268 | 1 | 266 | 0.0 | 536 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|
Find 57 sgRNAs with CRISPR-Local
Find 228 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| CTACCATTTGGTGTGCTTAA+TGG | 0.176666 | 8.3:-17234415 | None:intergenic |
| CCAAGCAGAGCGAGAGAAAA+TGG | 0.241394 | 8.3:-17235124 | None:intergenic |
| AACAGTGTCATCTGAGTTAT+TGG | 0.256742 | 8.3:-17234051 | None:intergenic |
| TACCATTTGGTGTGCTTAAT+GGG | 0.275902 | 8.3:-17234414 | None:intergenic |
| TGAGTACTCAAAACTAGTTC+TGG | 0.277502 | 8.3:-17234383 | None:intergenic |
| TTCATCTTATCTAGGGAGTC+AGG | 0.329309 | 8.3:+17233946 | MS.gene48370:intron |
| GCGTTTAAGGAGGCTAATTA+AGG | 0.341665 | 8.3:+17232199 | MS.gene48370:CDS |
| TTTGGCGGGTTTGCGGTTGA+TGG | 0.351768 | 8.3:+17231862 | MS.gene48370:CDS |
| ACACTGTTCAACTTCTTAGA+AGG | 0.361403 | 8.3:+17234066 | MS.gene48370:CDS |
| GTTCTTACCATTCTACCATT+TGG | 0.375872 | 8.3:-17234427 | None:intergenic |
| GTTAAGTAGTACCAAGAGTT+TGG | 0.384169 | 8.3:+17231844 | MS.gene48370:CDS |
| AGCCTCCTTAAACGCAAAAC+AGG | 0.417473 | 8.3:-17232191 | None:intergenic |
| CTAGTTCTGGGAAGAAGTAC+TGG | 0.429029 | 8.3:-17234370 | None:intergenic |
| CCAAGAGTTTGGCGGGTTTG+CGG | 0.430302 | 8.3:+17231855 | MS.gene48370:CDS |
| CCGCAAACCCGCCAAACTCT+TGG | 0.454081 | 8.3:-17231855 | None:intergenic |
| TGCTCTCTTGAAACAACAAA+TGG | 0.454342 | 8.3:+17232015 | MS.gene48370:CDS |
| GGTGGCATGTAGTAATAATT+CGG | 0.455634 | 8.3:+17231940 | MS.gene48370:CDS |
| CAAGCAGAGCGAGAGAAAAT+GGG | 0.456582 | 8.3:-17235123 | None:intergenic |
| AGGGAGTCAGGGTTCAAGTC+AGG | 0.469382 | 8.3:+17233958 | MS.gene48370:intron |
| TTGGCGGGTTTGCGGTTGAT+GGG | 0.472771 | 8.3:+17231863 | MS.gene48370:CDS |
| GGATCATAACCGATGCTAAC+GGG | 0.473221 | 8.3:+17234093 | MS.gene48370:CDS |
| GATAGAAATGAGGTTGAACT+TGG | 0.475178 | 8.3:-17231977 | None:intergenic |
| AGTCAGGAGTGTATATATAG+AGG | 0.482751 | 8.3:+17233974 | MS.gene48370:CDS |
| GCTTAAGTTGTTTGAAGAAG+AGG | 0.484114 | 8.3:+17232166 | MS.gene48370:CDS |
| GTTCAACCTCATTTCTATCT+CGG | 0.485915 | 8.3:+17231981 | MS.gene48370:CDS |
| GAGTACTCAAAACTAGTTCT+GGG | 0.486792 | 8.3:-17234382 | None:intergenic |
| AATTGCTGATGAGAGATTCC+AGG | 0.487924 | 8.3:+17232226 | MS.gene48370:CDS |
| TACCAATGTTGTAGCATCAC+TGG | 0.493572 | 8.3:-17233362 | None:intergenic |
| TTCTGATCTCCCGTTAGCAT+CGG | 0.500995 | 8.3:-17234102 | None:intergenic |
| TTCAACTTCTTAGAAGGCAC+TGG | 0.506775 | 8.3:+17234072 | MS.gene48370:CDS |
| ATGATCCATGTTGATAAAGT+AGG | 0.511158 | 8.3:+17235073 | MS.gene48370:CDS |
| TGCTGCAGTTCAATCTCAAA+TGG | 0.516025 | 8.3:-17235164 | None:intergenic |
| AAGCACACCAAATGGTAGAA+TGG | 0.516600 | 8.3:+17234420 | MS.gene48370:CDS |
| TGCCCATTAAGCACACCAAA+TGG | 0.537654 | 8.3:+17234412 | MS.gene48370:CDS |
| GGAAGAAGTCAGCCTTCGAA+AGG | 0.539009 | 8.3:+17233996 | MS.gene48370:CDS |
| AAGTAGTACCAAGAGTTTGG+CGG | 0.543463 | 8.3:+17231847 | MS.gene48370:CDS |
| TTCCAGTGATGCTACAACAT+TGG | 0.545070 | 8.3:+17233360 | MS.gene48370:CDS |
| AGTAGTACCAAGAGTTTGGC+GGG | 0.546540 | 8.3:+17231848 | MS.gene48370:CDS |
| GTCAGGAGTGTATATATAGA+GGG | 0.549148 | 8.3:+17233975 | MS.gene48370:CDS |
| TCATCTTATCTAGGGAGTCA+GGG | 0.560049 | 8.3:+17233947 | MS.gene48370:intron |
| AGCATTGTTATAGGATTACA+AGG | 0.560344 | 8.3:+17232121 | MS.gene48370:intron |
| CAATAGCAATAGCATGGTGG+TGG | 0.572915 | 8.3:+17231922 | MS.gene48370:CDS |
| GCAATGATCGCATTAAATGA+AGG | 0.573531 | 8.3:-17235100 | None:intergenic |
| GCGAGGGTGAAGAGAAGAGG+TGG | 0.595530 | 8.3:+17231893 | MS.gene48370:CDS |
| GAAGCGAGGGTGAAGAGAAG+AGG | 0.595974 | 8.3:+17231890 | MS.gene48370:CDS |
| TTGTTGTTTCAAGAGAGCAT+AGG | 0.596200 | 8.3:-17232011 | None:intergenic |
| ACGGGAGATCAGAAAATGTA+CGG | 0.603434 | 8.3:+17234111 | MS.gene48370:CDS |
| TGGATCATAACCGATGCTAA+CGG | 0.617395 | 8.3:+17234092 | MS.gene48370:CDS |
| GAAGAAGTCAGCCTTCGAAA+GGG | 0.621978 | 8.3:+17233997 | MS.gene48370:CDS |
| GGTTGATGGGTCATGAAGCG+AGG | 0.630103 | 8.3:+17231876 | MS.gene48370:CDS |
| TTGAGTCCGAGATAGAAATG+AGG | 0.635687 | 8.3:-17231987 | None:intergenic |
| GGAAGTAGCTGCTAAATCTG+AGG | 0.636191 | 8.3:+17232036 | MS.gene48370:CDS |
| CAATAGCAATAGCAATAGCA+TGG | 0.638289 | 8.3:+17231916 | MS.gene48370:CDS |
| GCGAGCCTACTTTATCAACA+TGG | 0.641796 | 8.3:-17235078 | None:intergenic |
| AAGCAGAGCGAGAGAAAATG+GGG | 0.642561 | 8.3:-17235122 | None:intergenic |
| GTTGATGGGTCATGAAGCGA+GGG | 0.668748 | 8.3:+17231877 | MS.gene48370:CDS |
| TAGCAATAGCAATAGCATGG+TGG | 0.729970 | 8.3:+17231919 | MS.gene48370:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !!! | AATTAAACAATATTCTAAAG+CGG | - | chr8.3:17234716-17234735 | None:intergenic | 15.0% |
| !!! | ATTCATTCTTTACTATTTTA+TGG | + | chr8.3:17234144-17234163 | MS.gene48370:intron | 15.0% |
| !!! | ATTTAATTTCATCTTATCTA+GGG | + | chr8.3:17233939-17233958 | MS.gene48370:intron | 15.0% |
| !!! | TTTTATTTCATAATATGGTA+TGG | - | chr8.3:17234925-17234944 | None:intergenic | 15.0% |
| !! | AAATTTGAACTCTGTAAATA+TGG | - | chr8.3:17233019-17233038 | None:intergenic | 20.0% |
| !! | AATGCATTACAATATTCAAT+AGG | + | chr8.3:17232382-17232401 | MS.gene48370:intron | 20.0% |
| !! | ACTTAATTAAAAATTGTGTG+TGG | + | chr8.3:17232499-17232518 | MS.gene48370:intron | 20.0% |
| !! | ATAATATTGTAGGTTGTAAT+TGG | + | chr8.3:17234554-17234573 | MS.gene48370:intron | 20.0% |
| !! | CTTAATTAAAAATTGTGTGT+GGG | + | chr8.3:17232500-17232519 | MS.gene48370:intron | 20.0% |
| !! | TACAACCTACAATATTATAA+GGG | - | chr8.3:17234552-17234571 | None:intergenic | 20.0% |
| !! | TATATCTTCATTTGTGTATT+CGG | + | chr8.3:17233232-17233251 | MS.gene48370:intron | 20.0% |
| !! | TTAAAGATCTTCAGAAAAAA+AGG | + | chr8.3:17233849-17233868 | MS.gene48370:intron | 20.0% |
| !! | TTAAGTGTACAAAAAATACA+AGG | - | chr8.3:17232485-17232504 | None:intergenic | 20.0% |
| !! | TTACAACCTACAATATTATA+AGG | - | chr8.3:17234553-17234572 | None:intergenic | 20.0% |
| !! | TTTATTGAATTGTGAAACAT+AGG | - | chr8.3:17233077-17233096 | None:intergenic | 20.0% |
| !!! | AAAGACATGGTATTTTTTAT+AGG | - | chr8.3:17233657-17233676 | None:intergenic | 20.0% |
| !!! | AAATACCATGTCTTTAAAAA+TGG | + | chr8.3:17233662-17233681 | MS.gene48370:intron | 20.0% |
| !!! | CATTTAATTTCATCTTATCT+AGG | + | chr8.3:17233938-17233957 | MS.gene48370:intron | 20.0% |
| !!! | TAAATTGATAGTTGTTTGTT+TGG | - | chr8.3:17234894-17234913 | None:intergenic | 20.0% |
| !!! | TTCTTTGATTTAAGCTATAT+CGG | + | chr8.3:17233432-17233451 | MS.gene48370:intron | 20.0% |
| !!! | TTTTTTCATGTATAAGTTTG+TGG | - | chr8.3:17233901-17233920 | None:intergenic | 20.0% |
| !!! | TTTTTTCTGAAGATCTTTAA+TGG | - | chr8.3:17233849-17233868 | None:intergenic | 20.0% |
| ! | AAAACGAGAATTTACATTCT+AGG | - | chr8.3:17233473-17233492 | None:intergenic | 25.0% |
| ! | AAGTTTGTGGTGTATAATTT+GGG | - | chr8.3:17233888-17233907 | None:intergenic | 25.0% |
| ! | AATTAGAGATGAAATATGCA+CGG | - | chr8.3:17233198-17233217 | None:intergenic | 25.0% |
| ! | AATTCCACATTCTATCAAAT+CGG | + | chr8.3:17233168-17233187 | MS.gene48370:intron | 25.0% |
| ! | ACGCTTTATAATCTATTGTT+AGG | - | chr8.3:17232447-17232466 | None:intergenic | 25.0% |
| ! | AGATAGTAATATAATCACAG+AGG | + | chr8.3:17234647-17234666 | MS.gene48370:intron | 25.0% |
| ! | ATGTTGAATATCATAGACTA+TGG | + | chr8.3:17233686-17233705 | MS.gene48370:intron | 25.0% |
| ! | CAAAGAAAGAACTATCTATT+AGG | - | chr8.3:17233419-17233438 | None:intergenic | 25.0% |
| ! | CACATCAATTTGAATATTGT+GGG | - | chr8.3:17232899-17232918 | None:intergenic | 25.0% |
| ! | CTAACTGTCTAATTGAATAA+TGG | - | chr8.3:17234629-17234648 | None:intergenic | 25.0% |
| ! | TAAAGAAAATAATAGACACC+TGG | - | chr8.3:17232247-17232266 | None:intergenic | 25.0% |
| ! | TAAGTTTGTGGTGTATAATT+TGG | - | chr8.3:17233889-17233908 | None:intergenic | 25.0% |
| ! | TCAAAACAATTCTTATTACG+CGG | - | chr8.3:17234508-17234527 | None:intergenic | 25.0% |
| ! | TCAATTGTAGAATCTCAAAT+TGG | + | chr8.3:17232080-17232099 | MS.gene48370:intron | 25.0% |
| ! | TCACATCAATTTGAATATTG+TGG | - | chr8.3:17232900-17232919 | None:intergenic | 25.0% |
| ! | TGATACCCTTATAATATTGT+AGG | + | chr8.3:17234544-17234563 | MS.gene48370:intron | 25.0% |
| ! | TTGAAAGAGTTAAAGGATTA+AGG | + | chr8.3:17233575-17233594 | MS.gene48370:intron | 25.0% |
| ! | TTGAGTGTACAAAAAATACA+AGG | + | chr8.3:17232550-17232569 | MS.gene48370:intron | 25.0% |
| ! | TTTACAGAGTTCAAATTTGT+TGG | + | chr8.3:17233021-17233040 | MS.gene48370:intron | 25.0% |
| ! | TTTGATTACATCAGTAGAAT+AGG | + | chr8.3:17233510-17233529 | MS.gene48370:intron | 25.0% |
| !! | ACTTGATTTTCTATATGACA+GGG | + | chr8.3:17234324-17234343 | MS.gene48370:intron | 25.0% |
| !! | AGAAAATTGAACATTTTGTG+AGG | - | chr8.3:17233757-17233776 | None:intergenic | 25.0% |
| !! | TACTTGATTTTCTATATGAC+AGG | + | chr8.3:17234323-17234342 | MS.gene48370:intron | 25.0% |
| !!! | AAAAGGAGTCTATTTTGAAA+GGG | - | chr8.3:17232304-17232323 | None:intergenic | 25.0% |
| !!! | AAAAGGTTCGTCTTTTAATT+TGG | + | chr8.3:17233792-17233811 | MS.gene48370:intron | 25.0% |
| !!! | AATACTTTTGAAAACTACAC+CGG | + | chr8.3:17232691-17232710 | MS.gene48370:intron | 25.0% |
| !!! | ACATTCCATTTTTAAAGACA+TGG | - | chr8.3:17233670-17233689 | None:intergenic | 25.0% |
| !!! | GAACATTTTAAAAAAGAGTG+TGG | - | chr8.3:17233343-17233362 | None:intergenic | 25.0% |
| !!! | TTTTTCCTTTGTTTTTTTCC+TGG | + | chr8.3:17234456-17234475 | MS.gene48370:intron | 25.0% |
| AAAACAATTCTTATTACGCG+GGG | - | chr8.3:17234506-17234525 | None:intergenic | 30.0% | |
| AAAGGAGTTGAAAGAGTTAA+AGG | + | chr8.3:17233568-17233587 | MS.gene48370:intron | 30.0% | |
| AAGGATTAAGGTTCAAATTC+CGG | + | chr8.3:17233587-17233606 | MS.gene48370:intron | 30.0% | |
| AATCCTCAATAAGTTAGACA+GGG | + | chr8.3:17232987-17233006 | MS.gene48370:intron | 30.0% | |
| AATGAGTAAGAGCTATAGAT+TGG | - | chr8.3:17232966-17232985 | None:intergenic | 30.0% | |
| ACCTTTCTATCACATAGATT+TGG | + | chr8.3:17234594-17234613 | MS.gene48370:intron | 30.0% | |
| AGCATTGTTATAGGATTACA+AGG | + | chr8.3:17232121-17232140 | MS.gene48370:intron | 30.0% | |
| ATCTTCTACAAAGAGTTCAA+AGG | - | chr8.3:17232751-17232770 | None:intergenic | 30.0% | |
| CAAAACAATTCTTATTACGC+GGG | - | chr8.3:17234507-17234526 | None:intergenic | 30.0% | |
| GTATAATTTGGGTGAAATAC+AGG | - | chr8.3:17233877-17233896 | None:intergenic | 30.0% | |
| GTTGTGATCTGTAATGAAAA+TGG | + | chr8.3:17233818-17233837 | MS.gene48370:intron | 30.0% | |
| TAGTAATATAATCACAGAGG+AGG | + | chr8.3:17234650-17234669 | MS.gene48370:intron | 30.0% | |
| TATAGCCAGGAAAAAAACAA+AGG | - | chr8.3:17234464-17234483 | None:intergenic | 30.0% | |
| TCCAAATCTATGTGATAGAA+AGG | - | chr8.3:17234598-17234617 | None:intergenic | 30.0% | |
| TCTTCTACAAAGAGTTCAAA+GGG | - | chr8.3:17232750-17232769 | None:intergenic | 30.0% | |
| TGTAGAATCTCAAATTGGAA+TGG | + | chr8.3:17232085-17232104 | MS.gene48370:intron | 30.0% | |
| TGTGGATATAAAAGGGAAAA+TGG | - | chr8.3:17234192-17234211 | None:intergenic | 30.0% | |
| TTCTATCACATAGATTTGGA+TGG | + | chr8.3:17234598-17234617 | MS.gene48370:intron | 30.0% | |
| TTTCCAAATGAGATCTTCAA+CGG | - | chr8.3:17234819-17234838 | None:intergenic | 30.0% | |
| ! | AAATATGGTGGAAACACAAT+CGG | - | chr8.3:17235005-17235024 | None:intergenic | 30.0% |
| ! | AATTTCCAGAGGTTTAAAAC+AGG | - | chr8.3:17234283-17234302 | None:intergenic | 30.0% |
| ! | ACTCACATGTTACTTAGAAA+AGG | - | chr8.3:17232321-17232340 | None:intergenic | 30.0% |
| ! | ATGATCCATGTTGATAAAGT+AGG | + | chr8.3:17235073-17235092 | MS.gene48370:CDS | 30.0% |
| ! | ATTTTCCCTTTTATATCCAC+AGG | + | chr8.3:17234191-17234210 | MS.gene48370:intron | 30.0% |
| ! | CTATTTGTCTTTGACACTTT+TGG | - | chr8.3:17232797-17232816 | None:intergenic | 30.0% |
| ! | CTTGATTTTCTATATGACAG+GGG | + | chr8.3:17234325-17234344 | MS.gene48370:intron | 30.0% |
| ! | CTTTTCTTCTCTAGTAGAAA+AGG | + | chr8.3:17233775-17233794 | MS.gene48370:intron | 30.0% |
| ! | TAAGAACTGAGCATTGTTAT+AGG | + | chr8.3:17232112-17232131 | MS.gene48370:intron | 30.0% |
| ! | TTGATTTTCTATATGACAGG+GGG | + | chr8.3:17234326-17234345 | MS.gene48370:intron | 30.0% |
| ! | TTTTCCCTTTTATATCCACA+GGG | + | chr8.3:17234192-17234211 | MS.gene48370:intron | 30.0% |
| !! | AGTTCAAATTTGTTGGAGTA+TGG | + | chr8.3:17233028-17233047 | MS.gene48370:intron | 30.0% |
| !! | GAAAAGGAGTCTATTTTGAA+AGG | - | chr8.3:17232305-17232324 | None:intergenic | 30.0% |
| !! | GGTGTAGTTTTCAAAAGTAT+TGG | - | chr8.3:17232692-17232711 | None:intergenic | 30.0% |
| !! | GTTTTGAGTGTCTAGATTTA+CGG | + | chr8.3:17234521-17234540 | MS.gene48370:intron | 30.0% |
| !! | TTCTGGCTTAATGTCAAATA+TGG | - | chr8.3:17235020-17235039 | None:intergenic | 30.0% |
| AAACAATTCTTATTACGCGG+GGG | - | chr8.3:17234505-17234524 | None:intergenic | 35.0% | |
| AACAGTGTCATCTGAGTTAT+TGG | - | chr8.3:17234054-17234073 | None:intergenic | 35.0% | |
| ACACTGTTCAACTTCTTAGA+AGG | + | chr8.3:17234066-17234085 | MS.gene48370:CDS | 35.0% | |
| ACGTCAAAGCATGTAAAACA+TGG | - | chr8.3:17234978-17234997 | None:intergenic | 35.0% | |
| AGAACCTTGTATCATATTGC+AGG | + | chr8.3:17235036-17235055 | MS.gene48370:intron | 35.0% | |
| CAATAGCAATAGCAATAGCA+TGG | + | chr8.3:17231916-17231935 | MS.gene48370:CDS | 35.0% | |
| CAATCCTCAATAAGTTAGAC+AGG | + | chr8.3:17232986-17233005 | MS.gene48370:intron | 35.0% | |
| CAATTTGAATATTGTGGGAC+AGG | - | chr8.3:17232894-17232913 | None:intergenic | 35.0% | |
| CGGACATATAAACAAAGAGA+AGG | - | chr8.3:17234696-17234715 | None:intergenic | 35.0% | |
| CGTCAAAGCATGTAAAACAT+GGG | - | chr8.3:17234977-17234996 | None:intergenic | 35.0% | |
| GACAAAAAAAGAAACATGCG+AGG | + | chr8.3:17232411-17232430 | MS.gene48370:intron | 35.0% | |
| GATAGAAATGAGGTTGAACT+TGG | - | chr8.3:17231980-17231999 | None:intergenic | 35.0% | |
| GCAATGATCGCATTAAATGA+AGG | - | chr8.3:17235103-17235122 | None:intergenic | 35.0% | |
| GGTGGCATGTAGTAATAATT+CGG | + | chr8.3:17231940-17231959 | MS.gene48370:CDS | 35.0% | |
| GTATCAAAGTTACACGAGAA+TGG | + | chr8.3:17232617-17232636 | MS.gene48370:intron | 35.0% | |
| GTTAAGTAGTACCAAGAGTT+TGG | + | chr8.3:17231844-17231863 | MS.gene48370:CDS | 35.0% | |
| GTTCAACCTCATTTCTATCT+CGG | + | chr8.3:17231981-17232000 | MS.gene48370:CDS | 35.0% | |
| GTTCTTACCATTCTACCATT+TGG | - | chr8.3:17234430-17234449 | None:intergenic | 35.0% | |
| TAACTCTCACTCAAATGGTA+TGG | + | chr8.3:17232357-17232376 | MS.gene48370:intron | 35.0% | |
| TACACTCAAGAGCTAATTGT+TGG | - | chr8.3:17232539-17232558 | None:intergenic | 35.0% | |
| TCACATAGATTTGGATGGTA+TGG | + | chr8.3:17234603-17234622 | MS.gene48370:intron | 35.0% | |
| TGAGTACTCAAAACTAGTTC+TGG | - | chr8.3:17234386-17234405 | None:intergenic | 35.0% | |
| TGCAATATGATACAAGGTTC+TGG | - | chr8.3:17235037-17235056 | None:intergenic | 35.0% | |
| TGCTCTCTTGAAACAACAAA+TGG | + | chr8.3:17232015-17232034 | MS.gene48370:CDS | 35.0% | |
| TGGCTTAATGTCAAATATGG+TGG | - | chr8.3:17235017-17235036 | None:intergenic | 35.0% | |
| TGTAGAAGATTCACAACCTT+TGG | + | chr8.3:17232761-17232780 | MS.gene48370:intron | 35.0% | |
| TGTGAAACATAGGATCACAT+AGG | - | chr8.3:17233067-17233086 | None:intergenic | 35.0% | |
| TGTTGAACTTGAATTTCCAG+AGG | - | chr8.3:17234294-17234313 | None:intergenic | 35.0% | |
| TTCCAAATGAGATCTTCAAC+GGG | - | chr8.3:17234818-17234837 | None:intergenic | 35.0% | |
| TTCTAAGTAACATGTGAGTG+AGG | + | chr8.3:17232322-17232341 | MS.gene48370:intron | 35.0% | |
| TTGTTTGAGCTAAGGGTTAA+AGG | + | chr8.3:17233550-17233569 | MS.gene48370:intron | 35.0% | |
| TTTATTTCCAAAGCTGGATC+AGG | - | chr8.3:17234258-17234277 | None:intergenic | 35.0% | |
| TTTCCCTGTCTAACTTATTG+AGG | - | chr8.3:17232993-17233012 | None:intergenic | 35.0% | |
| ! | AAAAAGTATAGCCCTTTCGA+AGG | - | chr8.3:17234011-17234030 | None:intergenic | 35.0% |
| ! | AGTCAGGAGTGTATATATAG+AGG | + | chr8.3:17233974-17233993 | MS.gene48370:CDS | 35.0% |
| ! | GAGTACTCAAAACTAGTTCT+GGG | - | chr8.3:17234385-17234404 | None:intergenic | 35.0% |
| ! | GCTTAAGTTGTTTGAAGAAG+AGG | + | chr8.3:17232166-17232185 | MS.gene48370:CDS | 35.0% |
| ! | GTCAGGAGTGTATATATAGA+GGG | + | chr8.3:17233975-17233994 | MS.gene48370:CDS | 35.0% |
| ! | GTTAATTTTTCCTCCTTCAC+CGG | - | chr8.3:17233609-17233628 | None:intergenic | 35.0% |
| !! | AAAGACCTGTTTTAAACCTC+TGG | + | chr8.3:17234275-17234294 | MS.gene48370:intron | 35.0% |
| !! | TACCATTTGGTGTGCTTAAT+GGG | - | chr8.3:17234417-17234436 | None:intergenic | 35.0% |
| !! | TTGTTGTTTCAAGAGAGCAT+AGG | - | chr8.3:17232014-17232033 | None:intergenic | 35.0% |
| !! | TTTATGGTGTTATGCTTCGA+AGG | + | chr8.3:17234160-17234179 | MS.gene48370:intron | 35.0% |
| AACAATTCTTATTACGCGGG+GGG | - | chr8.3:17234504-17234523 | None:intergenic | 40.0% | |
| AACCCGTTGAAGATCTCATT+TGG | + | chr8.3:17234813-17234832 | MS.gene48370:intron | 40.0% | |
| AAGCACACCAAATGGTAGAA+TGG | + | chr8.3:17234420-17234439 | MS.gene48370:CDS | 40.0% | |
| AAGTAGTACCAAGAGTTTGG+CGG | + | chr8.3:17231847-17231866 | MS.gene48370:CDS | 40.0% | |
| AAGTGCCCTGTGGATATAAA+AGG | - | chr8.3:17234200-17234219 | None:intergenic | 40.0% | |
| AATTGCTGATGAGAGATTCC+AGG | + | chr8.3:17232226-17232245 | MS.gene48370:CDS | 40.0% | |
| ACAAAGAGAAGGATGAACTC+TGG | - | chr8.3:17234685-17234704 | None:intergenic | 40.0% | |
| ACGGGAGATCAGAAAATGTA+CGG | + | chr8.3:17234111-17234130 | MS.gene48370:CDS | 40.0% | |
| ACTCAAGAGCTAATTGTTGG+AGG | - | chr8.3:17232536-17232555 | None:intergenic | 40.0% | |
| AGCTGCATCCTAGAAAAAAG+AGG | - | chr8.3:17233290-17233309 | None:intergenic | 40.0% | |
| AGTGCCCTGTGGATATAAAA+GGG | - | chr8.3:17234199-17234218 | None:intergenic | 40.0% | |
| CAAAGTTACACGAGAATGGA+AGG | + | chr8.3:17232621-17232640 | MS.gene48370:intron | 40.0% | |
| CCTTCCTGCAATATGATACA+AGG | - | chr8.3:17235043-17235062 | None:intergenic | 40.0% | |
| CCTTGTATCATATTGCAGGA+AGG | + | chr8.3:17235040-17235059 | MS.gene48370:intron | 40.0% | |
| GAGCATAACTCTCACTCAAA+TGG | + | chr8.3:17232352-17232371 | MS.gene48370:intron | 40.0% | |
| GCGTTTAAGGAGGCTAATTA+AGG | + | chr8.3:17232199-17232218 | MS.gene48370:CDS | 40.0% | |
| GCTGCATCCTAGAAAAAAGA+GGG | - | chr8.3:17233289-17233308 | None:intergenic | 40.0% | |
| TAAGGTTCAAATTCCGGTGA+AGG | + | chr8.3:17233593-17233612 | MS.gene48370:intron | 40.0% | |
| TACCAATGTTGTAGCATCAC+TGG | - | chr8.3:17233365-17233384 | None:intergenic | 40.0% | |
| TAGCAATAGCAATAGCATGG+TGG | + | chr8.3:17231919-17231938 | MS.gene48370:CDS | 40.0% | |
| TCAAAGCTTCTGCAGAAATC+CGG | - | chr8.3:17234785-17234804 | None:intergenic | 40.0% | |
| TCATCTTATCTAGGGAGTCA+GGG | + | chr8.3:17233947-17233966 | MS.gene48370:intron | 40.0% | |
| TGAACATGCTTTCTCTCGTT+TGG | + | chr8.3:17232838-17232857 | MS.gene48370:intron | 40.0% | |
| TGGATCATAACCGATGCTAA+CGG | + | chr8.3:17234092-17234111 | MS.gene48370:CDS | 40.0% | |
| TTATGTACCTGATCCAGCTT+TGG | + | chr8.3:17234248-17234267 | MS.gene48370:intron | 40.0% | |
| TTCATCTTATCTAGGGAGTC+AGG | + | chr8.3:17233946-17233965 | MS.gene48370:intron | 40.0% | |
| TTCCAGTGATGCTACAACAT+TGG | + | chr8.3:17233360-17233379 | MS.gene48370:CDS | 40.0% | |
| TTGAGTCCGAGATAGAAATG+AGG | - | chr8.3:17231990-17232009 | None:intergenic | 40.0% | |
| TTGAGTGAGAGTTATGCTCA+CGG | - | chr8.3:17232351-17232370 | None:intergenic | 40.0% | |
| TTTCTATATGACAGGGGGAT+TGG | + | chr8.3:17234331-17234350 | MS.gene48370:intron | 40.0% | |
| ! | AACCTGTTTTGCGTTTAAGG+AGG | + | chr8.3:17232189-17232208 | MS.gene48370:CDS | 40.0% |
| ! | ACCTAGGGAGTATATATCTG+AGG | - | chr8.3:17233724-17233743 | None:intergenic | 40.0% |
| ! | AGCTCAACTTGTTTGAGCTA+AGG | + | chr8.3:17233542-17233561 | MS.gene48370:intron | 40.0% |
| ! | AGGAACCTGTTTTGCGTTTA+AGG | + | chr8.3:17232186-17232205 | MS.gene48370:CDS | 40.0% |
| ! | CAGGTCTTTATTTCCAAAGC+TGG | - | chr8.3:17234264-17234283 | None:intergenic | 40.0% |
| ! | GCTCAACTTGTTTGAGCTAA+GGG | + | chr8.3:17233543-17233562 | MS.gene48370:intron | 40.0% |
| ! | TTCAACTTCTTAGAAGGCAC+TGG | + | chr8.3:17234072-17234091 | MS.gene48370:CDS | 40.0% |
| ! | TTTGCTTAAAGCGGCTTTGA+GGG | + | chr8.3:17232865-17232884 | MS.gene48370:intron | 40.0% |
| ! | TTTGGCCACTTTGCTTAAAG+CGG | + | chr8.3:17232856-17232875 | MS.gene48370:intron | 40.0% |
| !! | CTACCATTTGGTGTGCTTAA+TGG | - | chr8.3:17234418-17234437 | None:intergenic | 40.0% |
| !! | TGAGGCTATTCTGAAACCTA+GGG | - | chr8.3:17233739-17233758 | None:intergenic | 40.0% |
| !! | TGTGCCGATTTGATAGAATG+TGG | - | chr8.3:17233175-17233194 | None:intergenic | 40.0% |
| !!! | ATTGGTTTTGCCATCCAGAA+AGG | - | chr8.3:17232674-17232693 | None:intergenic | 40.0% |
| !!! | CACACTTCCCTCTTTTTTCT+AGG | + | chr8.3:17233279-17233298 | MS.gene48370:intron | 40.0% |
| !!! | TTGGTTTTGCCATCCAGAAA+GGG | - | chr8.3:17232673-17232692 | None:intergenic | 40.0% |
| AAAACTACACCGGTAGACCT+AGG | + | chr8.3:17232701-17232720 | MS.gene48370:intron | 45.0% | |
| AAATGTCAACATCGCCCATC+CGG | + | chr8.3:17234763-17234782 | MS.gene48370:intron | 45.0% | |
| AAGCAGAGCGAGAGAAAATG+GGG | - | chr8.3:17235125-17235144 | None:intergenic | 45.0% | |
| ACAATTCTTATTACGCGGGG+GGG | - | chr8.3:17234503-17234522 | None:intergenic | 45.0% | |
| AGCCTCCTTAAACGCAAAAC+AGG | - | chr8.3:17232194-17232213 | None:intergenic | 45.0% | |
| AGTAGTACCAAGAGTTTGGC+GGG | + | chr8.3:17231848-17231867 | MS.gene48370:CDS | 45.0% | |
| ATAGCAATGTTGCGTCTCCT+AGG | - | chr8.3:17232721-17232740 | None:intergenic | 45.0% | |
| CAAGCAGAGCGAGAGAAAAT+GGG | - | chr8.3:17235126-17235145 | None:intergenic | 45.0% | |
| CAATAGCAATAGCATGGTGG+TGG | + | chr8.3:17231922-17231941 | MS.gene48370:CDS | 45.0% | |
| CTTTGCTTAAAGCGGCTTTG+AGG | + | chr8.3:17232864-17232883 | MS.gene48370:intron | 45.0% | |
| GAAGAAGTCAGCCTTCGAAA+GGG | + | chr8.3:17233997-17234016 | MS.gene48370:CDS | 45.0% | |
| GACATTTACTAAGTGCCCTG+TGG | - | chr8.3:17234210-17234229 | None:intergenic | 45.0% | |
| GCCTCAGATATATACTCCCT+AGG | + | chr8.3:17233720-17233739 | MS.gene48370:intron | 45.0% | |
| GCGAGCCTACTTTATCAACA+TGG | - | chr8.3:17235081-17235100 | None:intergenic | 45.0% | |
| GGAAGTAGCTGCTAAATCTG+AGG | + | chr8.3:17232036-17232055 | MS.gene48370:CDS | 45.0% | |
| GGATCATAACCGATGCTAAC+GGG | + | chr8.3:17234093-17234112 | MS.gene48370:CDS | 45.0% | |
| TGCCATCCAGAAAGGGTTAA+TGG | - | chr8.3:17232666-17232685 | None:intergenic | 45.0% | |
| TGCCATTAACCCTTTCTGGA+TGG | + | chr8.3:17232661-17232680 | MS.gene48370:intron | 45.0% | |
| TGCCCATTAAGCACACCAAA+TGG | + | chr8.3:17234412-17234431 | MS.gene48370:CDS | 45.0% | |
| TTCTGATCTCCCGTTAGCAT+CGG | - | chr8.3:17234105-17234124 | None:intergenic | 45.0% | |
| ! | AGTGTGCCATTAACCCTTTC+TGG | + | chr8.3:17232657-17232676 | MS.gene48370:intron | 45.0% |
| ! | CAAAGCCGCTTTAAGCAAAG+TGG | - | chr8.3:17232864-17232883 | None:intergenic | 45.0% |
| !! | CTAGTTCTGGGAAGAAGTAC+TGG | - | chr8.3:17234373-17234392 | None:intergenic | 45.0% |
| !! | GATTCACAACCTTTGGTGCT+AGG | + | chr8.3:17232768-17232787 | MS.gene48370:intron | 45.0% |
| !! | GTGAGGCTATTCTGAAACCT+AGG | - | chr8.3:17233740-17233759 | None:intergenic | 45.0% |
| !!! | TTTTGGCTTCCTAGCACCAA+AGG | - | chr8.3:17232780-17232799 | None:intergenic | 45.0% |
| !!! | TTTTTTTTTATTTCATAATA+TGG | - | chr8.3:17234930-17234949 | None:intergenic | 5.0% |
| ACACGAGAATGGAAGGCAAG+CGG | + | chr8.3:17232628-17232647 | MS.gene48370:intron | 50.0% | |
| AGCTTCTGCAGAAATCCGGA+TGG | - | chr8.3:17234781-17234800 | None:intergenic | 50.0% | |
| CCAAGCAGAGCGAGAGAAAA+TGG | - | chr8.3:17235127-17235146 | None:intergenic | 50.0% | |
| GCTTCTGCAGAAATCCGGAT+GGG | - | chr8.3:17234780-17234799 | None:intergenic | 50.0% | |
| GGAAGAAGTCAGCCTTCGAA+AGG | + | chr8.3:17233996-17234015 | MS.gene48370:CDS | 50.0% | |
| GGTTCAAATTCCGGTGAAGG+AGG | + | chr8.3:17233596-17233615 | MS.gene48370:intron | 50.0% | |
| ! | CCATTTTCTCTCGCTCTGCT+TGG | + | chr8.3:17235124-17235143 | MS.gene48370:CDS | 50.0% |
| ! | GTTGATGGGTCATGAAGCGA+GGG | + | chr8.3:17231877-17231896 | MS.gene48370:CDS | 50.0% |
| AGGGAGTCAGGGTTCAAGTC+AGG | + | chr8.3:17233958-17233977 | MS.gene48370:intron | 55.0% | |
| ATTCTTATTACGCGGGGGGG+CGG | - | chr8.3:17234500-17234519 | None:intergenic | 55.0% | |
| CACGAGAATGGAAGGCAAGC+GGG | + | chr8.3:17232629-17232648 | MS.gene48370:intron | 55.0% | |
| GAAGCGAGGGTGAAGAGAAG+AGG | + | chr8.3:17231890-17231909 | MS.gene48370:CDS | 55.0% | |
| GACAGGGGGATTGGAGTTGT+TGG | + | chr8.3:17234340-17234359 | MS.gene48370:intron | 55.0% | |
| GTTGCGTCTCCTAGGTCTAC+CGG | - | chr8.3:17232713-17232732 | None:intergenic | 55.0% | |
| !! | CCAAGAGTTTGGCGGGTTTG+CGG | + | chr8.3:17231855-17231874 | MS.gene48370:CDS | 55.0% |
| !! | GGTTGATGGGTCATGAAGCG+AGG | + | chr8.3:17231876-17231895 | MS.gene48370:CDS | 55.0% |
| !! | TTGGCGGGTTTGCGGTTGAT+GGG | + | chr8.3:17231863-17231882 | MS.gene48370:CDS | 55.0% |
| !! | TTTGGCGGGTTTGCGGTTGA+TGG | + | chr8.3:17231862-17231881 | MS.gene48370:CDS | 55.0% |
| CCGCAAACCCGCCAAACTCT+TGG | - | chr8.3:17231858-17231877 | None:intergenic | 60.0% | |
| GCGAGGGTGAAGAGAAGAGG+TGG | + | chr8.3:17231893-17231912 | MS.gene48370:CDS | 60.0% | |
| TTCTTATTACGCGGGGGGGC+GGG | - | chr8.3:17234499-17234518 | None:intergenic | 60.0% | |
| GGGCGGGGTGAACTATAGCC+AGG | - | chr8.3:17234477-17234496 | None:intergenic | 65.0% | |
| TCTTATTACGCGGGGGGGCG+GGG | - | chr8.3:17234498-17234517 | None:intergenic | 65.0% | |
| CTTATTACGCGGGGGGGCGG+GGG | - | chr8.3:17234497-17234516 | None:intergenic | 70.0% | |
| ! | ATTACGCGGGGGGGCGGGGG+CGG | - | chr8.3:17234494-17234513 | None:intergenic | 80.0% |
| ! | TTACGCGGGGGGGCGGGGGC+GGG | - | chr8.3:17234493-17234512 | None:intergenic | 85.0% |
| ! | TACGCGGGGGGGCGGGGGCG+GGG | - | chr8.3:17234492-17234511 | None:intergenic | 90.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr8.3 | gene | 17231830 | 17235171 | 17231830 | ID=MS.gene48370 |
| chr8.3 | mRNA | 17231830 | 17235171 | 17231830 | ID=MS.gene48370.t1;Parent=MS.gene48370 |
| chr8.3 | exon | 17231830 | 17232057 | 17231830 | ID=MS.gene48370.t1.exon1;Parent=MS.gene48370.t1 |
| chr8.3 | CDS | 17231830 | 17232057 | 17231830 | ID=cds.MS.gene48370.t1;Parent=MS.gene48370.t1 |
| chr8.3 | exon | 17232134 | 17232247 | 17232134 | ID=MS.gene48370.t1.exon2;Parent=MS.gene48370.t1 |
| chr8.3 | CDS | 17232134 | 17232247 | 17232134 | ID=cds.MS.gene48370.t1;Parent=MS.gene48370.t1 |
| chr8.3 | exon | 17233301 | 17233381 | 17233301 | ID=MS.gene48370.t1.exon3;Parent=MS.gene48370.t1 |
| chr8.3 | CDS | 17233301 | 17233381 | 17233301 | ID=cds.MS.gene48370.t1;Parent=MS.gene48370.t1 |
| chr8.3 | exon | 17233960 | 17234132 | 17233960 | ID=MS.gene48370.t1.exon4;Parent=MS.gene48370.t1 |
| chr8.3 | CDS | 17233960 | 17234132 | 17233960 | ID=cds.MS.gene48370.t1;Parent=MS.gene48370.t1 |
| chr8.3 | exon | 17234345 | 17234441 | 17234345 | ID=MS.gene48370.t1.exon5;Parent=MS.gene48370.t1 |
| chr8.3 | CDS | 17234345 | 17234441 | 17234345 | ID=cds.MS.gene48370.t1;Parent=MS.gene48370.t1 |
| chr8.3 | exon | 17235058 | 17235171 | 17235058 | ID=MS.gene48370.t1.exon6;Parent=MS.gene48370.t1 |
| chr8.3 | CDS | 17235058 | 17235171 | 17235058 | ID=cds.MS.gene48370.t1;Parent=MS.gene48370.t1 |
| Gene Sequence |
| Protein sequence |
