Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene50741.t1 | XP_003606992.1 | 86.2 | 400 | 54 | 1 | 1 | 399 | 22 | 421 | 6.70E-186 | 660.6 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene50741.t1 | G7JIK6 | 86.2 | 400 | 54 | 1 | 1 | 399 | 22 | 421 | 4.8e-186 | 660.6 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| MS.gene049149 | MS.gene50741 | 0.848676 | 5.27E-60 | -1.69E-46 |
| MS.gene049150 | MS.gene50741 | 0.844342 | 8.02E-59 | -1.69E-46 |
| MS.gene049151 | MS.gene50741 | 0.828071 | 1.10E-54 | -1.69E-46 |
| MS.gene049153 | MS.gene50741 | 0.840411 | 8.84E-58 | -1.69E-46 |
| MS.gene049260 | MS.gene50741 | 0.804758 | 1.85E-49 | -1.69E-46 |
| MS.gene049346 | MS.gene50741 | 0.84531 | 4.40E-59 | -1.69E-46 |
| MS.gene049356 | MS.gene50741 | 0.849373 | 3.37E-60 | -1.69E-46 |
| MS.gene049491 | MS.gene50741 | 0.801245 | 9.86E-49 | -1.69E-46 |
| MS.gene049599 | MS.gene50741 | -0.825133 | 5.53E-54 | -1.69E-46 |
| MS.gene049661 | MS.gene50741 | 0.829385 | 5.30E-55 | -1.69E-46 |
| MS.gene049662 | MS.gene50741 | 0.835519 | 1.60E-56 | -1.69E-46 |
| MS.gene049758 | MS.gene50741 | 0.893079 | 8.77E-75 | -1.69E-46 |
| MS.gene049910 | MS.gene50741 | 0.851538 | 8.31E-61 | -1.69E-46 |
| MS.gene049915 | MS.gene50741 | 0.851593 | 8.02E-61 | -1.69E-46 |
| MS.gene050128 | MS.gene50741 | 0.84991 | 2.39E-60 | -1.69E-46 |
| MS.gene050301 | MS.gene50741 | 0.869072 | 4.07E-66 | -1.69E-46 |
| MS.gene050397 | MS.gene50741 | 0.848264 | 6.85E-60 | -1.69E-46 |
| MS.gene050404 | MS.gene50741 | 0.811027 | 8.60E-51 | -1.69E-46 |
| MS.gene050406 | MS.gene50741 | 0.828384 | 9.27E-55 | -1.69E-46 |
| MS.gene050426 | MS.gene50741 | -0.833456 | 5.28E-56 | -1.69E-46 |
| MS.gene050432 | MS.gene50741 | 0.828102 | 1.08E-54 | -1.69E-46 |
| MS.gene050464 | MS.gene50741 | 0.832279 | 1.04E-55 | -1.69E-46 |
| MS.gene050529 | MS.gene50741 | 0.854141 | 1.50E-61 | -1.69E-46 |
| MS.gene050558 | MS.gene50741 | 0.807722 | 4.40E-50 | -1.69E-46 |
| MS.gene050642 | MS.gene50741 | 0.809796 | 1.58E-50 | -1.69E-46 |
| MS.gene050670 | MS.gene50741 | 0.865477 | 5.74E-65 | -1.69E-46 |
| MS.gene050971 | MS.gene50741 | 0.825385 | 4.82E-54 | -1.69E-46 |
| MS.gene05101 | MS.gene50741 | 0.802608 | 5.18E-49 | -1.69E-46 |
| MS.gene05105 | MS.gene50741 | 0.833581 | 4.91E-56 | -1.69E-46 |
| MS.gene05119 | MS.gene50741 | -0.833757 | 4.44E-56 | -1.69E-46 |
| MS.gene051360 | MS.gene50741 | 0.81572 | 8.00E-52 | -1.69E-46 |
| MS.gene051471 | MS.gene50741 | 0.805942 | 1.05E-49 | -1.69E-46 |
| MS.gene051582 | MS.gene50741 | 0.81175 | 5.99E-51 | -1.69E-46 |
| MS.gene051860 | MS.gene50741 | 0.865174 | 7.15E-65 | -1.69E-46 |
| MS.gene051983 | MS.gene50741 | 0.826763 | 2.27E-54 | -1.69E-46 |
| MS.gene052011 | MS.gene50741 | -0.815033 | 1.14E-51 | -1.69E-46 |
| MS.gene052077 | MS.gene50741 | 0.883342 | 4.87E-71 | -1.69E-46 |
| MS.gene052078 | MS.gene50741 | 0.823235 | 1.54E-53 | -1.69E-46 |
| MS.gene052134 | MS.gene50741 | 0.807512 | 4.88E-50 | -1.69E-46 |
| MS.gene052135 | MS.gene50741 | 0.832358 | 9.89E-56 | -1.69E-46 |
| MS.gene052136 | MS.gene50741 | 0.81531 | 9.87E-52 | -1.69E-46 |
| MS.gene052178 | MS.gene50741 | 0.831439 | 1.67E-55 | -1.69E-46 |
| MS.gene052188 | MS.gene50741 | 0.882843 | 7.41E-71 | -1.69E-46 |
| MS.gene052253 | MS.gene50741 | 0.871069 | 9.05E-67 | -1.69E-46 |
| MS.gene052255 | MS.gene50741 | 0.819647 | 1.04E-52 | -1.69E-46 |
| MS.gene052310 | MS.gene50741 | 0.864664 | 1.03E-64 | -1.69E-46 |
| MS.gene052340 | MS.gene50741 | 0.910315 | 2.15E-82 | -1.69E-46 |
| MS.gene052414 | MS.gene50741 | 0.801513 | 8.69E-49 | -1.69E-46 |
| MS.gene052481 | MS.gene50741 | 0.813352 | 2.67E-51 | -1.69E-46 |
| MS.gene052485 | MS.gene50741 | 0.841268 | 5.27E-58 | -1.69E-46 |
| MS.gene053073 | MS.gene50741 | 0.820903 | 5.36E-53 | -1.69E-46 |
| MS.gene053103 | MS.gene50741 | 0.807682 | 4.49E-50 | -1.69E-46 |
| MS.gene05316 | MS.gene50741 | 0.844179 | 8.88E-59 | -1.69E-46 |
| MS.gene053181 | MS.gene50741 | 0.801176 | 1.02E-48 | -1.69E-46 |
| MS.gene053209 | MS.gene50741 | 0.874768 | 5.22E-68 | -1.69E-46 |
| MS.gene053449 | MS.gene50741 | 0.808031 | 3.78E-50 | -1.69E-46 |
| MS.gene053494 | MS.gene50741 | 0.813022 | 3.16E-51 | -1.69E-46 |
| MS.gene053557 | MS.gene50741 | 0.863829 | 1.88E-64 | -1.69E-46 |
| MS.gene053559 | MS.gene50741 | 0.81128 | 7.57E-51 | -1.69E-46 |
| MS.gene053836 | MS.gene50741 | 0.876284 | 1.58E-68 | -1.69E-46 |
| MS.gene053928 | MS.gene50741 | 0.824491 | 7.84E-54 | -1.69E-46 |
| MS.gene054123 | MS.gene50741 | 0.831524 | 1.59E-55 | -1.69E-46 |
| MS.gene054183 | MS.gene50741 | 0.805728 | 1.16E-49 | -1.69E-46 |
| MS.gene054349 | MS.gene50741 | 0.84776 | 9.43E-60 | -1.69E-46 |
| MS.gene054473 | MS.gene50741 | 0.823048 | 1.71E-53 | -1.69E-46 |
| MS.gene054542 | MS.gene50741 | 0.842838 | 2.03E-58 | -1.69E-46 |
| MS.gene054930 | MS.gene50741 | 0.853673 | 2.05E-61 | -1.69E-46 |
| MS.gene054955 | MS.gene50741 | 0.803429 | 3.50E-49 | -1.69E-46 |
| MS.gene054983 | MS.gene50741 | 0.828886 | 7.01E-55 | -1.69E-46 |
| MS.gene055116 | MS.gene50741 | 0.908639 | 1.37E-81 | -1.69E-46 |
| MS.gene055277 | MS.gene50741 | 0.829979 | 3.80E-55 | -1.69E-46 |
| MS.gene055390 | MS.gene50741 | 0.808484 | 3.03E-50 | -1.69E-46 |
| MS.gene055422 | MS.gene50741 | 0.850745 | 1.39E-60 | -1.69E-46 |
| MS.gene055428 | MS.gene50741 | 0.82342 | 1.40E-53 | -1.69E-46 |
| MS.gene05553 | MS.gene50741 | 0.844067 | 9.51E-59 | -1.69E-46 |
| MS.gene055604 | MS.gene50741 | 0.81755 | 3.11E-52 | -1.69E-46 |
| MS.gene055859 | MS.gene50741 | 0.859367 | 4.34E-63 | -1.69E-46 |
| MS.gene056191 | MS.gene50741 | 0.823928 | 1.06E-53 | -1.69E-46 |
| MS.gene056407 | MS.gene50741 | 0.839576 | 1.46E-57 | -1.69E-46 |
| MS.gene056410 | MS.gene50741 | 0.805593 | 1.24E-49 | -1.69E-46 |
| MS.gene056447 | MS.gene50741 | 0.828105 | 1.08E-54 | -1.69E-46 |
| MS.gene056511 | MS.gene50741 | 0.835437 | 1.68E-56 | -1.69E-46 |
| MS.gene056609 | MS.gene50741 | 0.81912 | 1.37E-52 | -1.69E-46 |
| MS.gene056612 | MS.gene50741 | 0.841748 | 3.94E-58 | -1.69E-46 |
| MS.gene056659 | MS.gene50741 | 0.841261 | 5.29E-58 | -1.69E-46 |
| MS.gene056723 | MS.gene50741 | 0.836489 | 9.08E-57 | -1.69E-46 |
| MS.gene056899 | MS.gene50741 | -0.818985 | 1.47E-52 | -1.69E-46 |
| MS.gene056979 | MS.gene50741 | 0.809535 | 1.80E-50 | -1.69E-46 |
| MS.gene05702 | MS.gene50741 | 0.852302 | 5.05E-61 | -1.69E-46 |
| MS.gene057121 | MS.gene50741 | 0.814765 | 1.30E-51 | -1.69E-46 |
| MS.gene057124 | MS.gene50741 | 0.833013 | 6.80E-56 | -1.69E-46 |
| MS.gene057396 | MS.gene50741 | 0.853571 | 2.19E-61 | -1.69E-46 |
| MS.gene057448 | MS.gene50741 | 0.886358 | 3.67E-72 | -1.69E-46 |
| MS.gene057449 | MS.gene50741 | 0.871384 | 7.12E-67 | -1.69E-46 |
| MS.gene057450 | MS.gene50741 | 0.890041 | 1.41E-73 | -1.69E-46 |
| MS.gene057469 | MS.gene50741 | 0.80622 | 9.14E-50 | -1.69E-46 |
| MS.gene057749 | MS.gene50741 | 0.819713 | 1.01E-52 | -1.69E-46 |
| MS.gene057754 | MS.gene50741 | 0.825432 | 4.70E-54 | -1.69E-46 |
| MS.gene057794 | MS.gene50741 | 0.808929 | 2.43E-50 | -1.69E-46 |
| MS.gene057796 | MS.gene50741 | 0.819181 | 1.33E-52 | -1.69E-46 |
| MS.gene057823 | MS.gene50741 | 0.814212 | 1.73E-51 | -1.69E-46 |
| MS.gene057927 | MS.gene50741 | 0.801538 | 8.59E-49 | -1.69E-46 |
| MS.gene058002 | MS.gene50741 | 0.876125 | 1.79E-68 | -1.69E-46 |
| MS.gene058007 | MS.gene50741 | 0.821972 | 3.04E-53 | -1.69E-46 |
| MS.gene058082 | MS.gene50741 | 0.861324 | 1.11E-63 | -1.69E-46 |
| MS.gene05811 | MS.gene50741 | 0.864778 | 9.52E-65 | -1.69E-46 |
| MS.gene058142 | MS.gene50741 | 0.832854 | 7.45E-56 | -1.69E-46 |
| MS.gene058293 | MS.gene50741 | 0.818526 | 1.87E-52 | -1.69E-46 |
| MS.gene058365 | MS.gene50741 | 0.835036 | 2.12E-56 | -1.69E-46 |
| MS.gene058660 | MS.gene50741 | 0.827189 | 1.79E-54 | -1.69E-46 |
| MS.gene058710 | MS.gene50741 | 0.84597 | 2.91E-59 | -1.69E-46 |
| MS.gene058749 | MS.gene50741 | 0.815093 | 1.10E-51 | -1.69E-46 |
| MS.gene058787 | MS.gene50741 | 0.82843 | 9.03E-55 | -1.69E-46 |
| MS.gene058845 | MS.gene50741 | 0.858522 | 7.77E-63 | -1.69E-46 |
| MS.gene058928 | MS.gene50741 | 0.850034 | 2.20E-60 | -1.69E-46 |
| MS.gene058949 | MS.gene50741 | 0.819583 | 1.08E-52 | -1.69E-46 |
| MS.gene05907 | MS.gene50741 | 0.867116 | 1.73E-65 | -1.69E-46 |
| MS.gene059285 | MS.gene50741 | 0.87765 | 5.30E-69 | -1.69E-46 |
| MS.gene059294 | MS.gene50741 | 0.831434 | 1.67E-55 | -1.69E-46 |
| MS.gene059342 | MS.gene50741 | 0.80183 | 7.48E-49 | -1.69E-46 |
| MS.gene059366 | MS.gene50741 | 0.851369 | 9.28E-61 | -1.69E-46 |
| MS.gene059420 | MS.gene50741 | 0.843531 | 1.32E-58 | -1.69E-46 |
| MS.gene059462 | MS.gene50741 | 0.80805 | 3.75E-50 | -1.69E-46 |
| MS.gene059518 | MS.gene50741 | 0.826761 | 2.27E-54 | -1.69E-46 |
| MS.gene059597 | MS.gene50741 | 0.859435 | 4.15E-63 | -1.69E-46 |
| MS.gene059676 | MS.gene50741 | 0.844546 | 7.07E-59 | -1.69E-46 |
| MS.gene059688 | MS.gene50741 | 0.881409 | 2.46E-70 | -1.69E-46 |
| MS.gene059692 | MS.gene50741 | 0.894278 | 2.86E-75 | -1.69E-46 |
| MS.gene059695 | MS.gene50741 | 0.892593 | 1.38E-74 | -1.69E-46 |
| MS.gene059708 | MS.gene50741 | 0.817381 | 3.40E-52 | -1.69E-46 |
| MS.gene059788 | MS.gene50741 | 0.813086 | 3.06E-51 | -1.69E-46 |
| MS.gene059807 | MS.gene50741 | 0.847299 | 1.26E-59 | -1.69E-46 |
| MS.gene05984 | MS.gene50741 | 0.880835 | 3.96E-70 | -1.69E-46 |
| MS.gene059876 | MS.gene50741 | 0.821166 | 4.66E-53 | -1.69E-46 |
| MS.gene059894 | MS.gene50741 | 0.868392 | 6.76E-66 | -1.69E-46 |
| MS.gene059899 | MS.gene50741 | 0.84701 | 1.52E-59 | -1.69E-46 |
| MS.gene06037 | MS.gene50741 | 0.85279 | 3.66E-61 | -1.69E-46 |
| MS.gene060403 | MS.gene50741 | 0.847584 | 1.05E-59 | -1.69E-46 |
| MS.gene060407 | MS.gene50741 | 0.811268 | 7.62E-51 | -1.69E-46 |
| MS.gene060495 | MS.gene50741 | 0.85586 | 4.75E-62 | -1.69E-46 |
| MS.gene060804 | MS.gene50741 | 0.812061 | 5.12E-51 | -1.69E-46 |
| MS.gene060837 | MS.gene50741 | 0.813613 | 2.34E-51 | -1.69E-46 |
| MS.gene060940 | MS.gene50741 | 0.802299 | 5.99E-49 | -1.69E-46 |
| MS.gene060986 | MS.gene50741 | 0.810322 | 1.22E-50 | -1.69E-46 |
| MS.gene061002 | MS.gene50741 | 0.82057 | 6.40E-53 | -1.69E-46 |
| MS.gene061041 | MS.gene50741 | 0.803457 | 3.45E-49 | -1.69E-46 |
| MS.gene061049 | MS.gene50741 | 0.907145 | 6.95E-81 | -1.69E-46 |
| MS.gene061051 | MS.gene50741 | -0.872064 | 4.24E-67 | -1.69E-46 |
| MS.gene061154 | MS.gene50741 | 0.851186 | 1.05E-60 | -1.69E-46 |
| MS.gene061159 | MS.gene50741 | 0.834528 | 2.85E-56 | -1.69E-46 |
PPI:
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene50741.t1 | MTR_4g071010 | 89.100 | 422 | 35 | 3 | 1 | 419 | 22 | 435 | 0.0 | 734 |
| MS.gene50741.t1 | MTR_4g071010 | 90.940 | 298 | 26 | 1 | 1 | 297 | 22 | 319 | 0.0 | 518 |
| MS.gene50741.t1 | MTR_4g071010 | 90.635 | 299 | 27 | 1 | 1 | 298 | 22 | 320 | 0.0 | 517 |
| MS.gene50741.t1 | MTR_4g071020 | 94.944 | 178 | 9 | 0 | 403 | 580 | 1 | 178 | 6.19e-116 | 342 |
| MS.gene50741.t1 | MTR_7g108865 | 59.429 | 175 | 65 | 4 | 405 | 574 | 1 | 174 | 4.35e-55 | 184 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene50741.t1 | AT2G38780 | 53.866 | 388 | 157 | 8 | 37 | 419 | 84 | 454 | 2.71e-131 | 392 |
| MS.gene50741.t1 | AT2G38780 | 54.337 | 392 | 149 | 9 | 37 | 419 | 88 | 458 | 3.37e-131 | 392 |
| MS.gene50741.t1 | AT2G38780 | 51.566 | 415 | 148 | 10 | 37 | 419 | 88 | 481 | 1.73e-126 | 380 |
| MS.gene50741.t1 | AT2G38780 | 55.439 | 285 | 115 | 5 | 37 | 317 | 84 | 360 | 8.55e-99 | 305 |
| MS.gene50741.t1 | AT2G38780 | 56.055 | 289 | 107 | 6 | 37 | 317 | 88 | 364 | 1.29e-98 | 304 |
| MS.gene50741.t1 | AT2G38780 | 56.446 | 287 | 105 | 6 | 37 | 315 | 88 | 362 | 1.83e-98 | 305 |
| MS.gene50741.t1 | AT2G38780 | 52.830 | 265 | 113 | 5 | 37 | 297 | 84 | 340 | 3.62e-83 | 264 |
| MS.gene50741.t1 | AT2G38780 | 52.830 | 265 | 113 | 5 | 37 | 297 | 88 | 344 | 3.76e-83 | 264 |
| MS.gene50741.t1 | AT2G38780 | 52.830 | 265 | 113 | 5 | 37 | 297 | 88 | 344 | 3.76e-83 | 264 |
| MS.gene50741.t1 | AT2G38780 | 52.830 | 265 | 113 | 5 | 37 | 297 | 88 | 344 | 3.76e-83 | 264 |
| MS.gene50741.t1 | AT2G38780 | 52.830 | 265 | 113 | 5 | 37 | 297 | 88 | 344 | 3.76e-83 | 264 |
| MS.gene50741.t1 | AT2G38780 | 52.830 | 265 | 113 | 5 | 37 | 297 | 88 | 344 | 3.76e-83 | 264 |
| MS.gene50741.t1 | AT2G38780 | 52.830 | 265 | 113 | 5 | 37 | 297 | 88 | 344 | 5.21e-83 | 265 |
| MS.gene50741.t1 | AT4G02250 | 29.878 | 164 | 100 | 2 | 414 | 574 | 7 | 158 | 1.11e-15 | 75.1 |
| MS.gene50741.t1 | AT1G55770 | 34.375 | 96 | 60 | 1 | 482 | 574 | 79 | 174 | 9.81e-14 | 70.1 |
Find 115 sgRNAs with CRISPR-Local
Find 302 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| TGAATTCCCGGGTCCAAATT+TGG | 0.191435 | 4.3:+34247081 | None:intergenic |
| ACAATTCATGTACAGCTTTC+AGG | 0.201984 | 4.3:-34248913 | MS.gene50741:intron |
| TTATTAAACGCAAGCTTTAT+AGG | 0.218801 | 4.3:+34251660 | None:intergenic |
| CATTGCTGTTGCCGTTAATA+AGG | 0.234346 | 4.3:-34246851 | MS.gene50741:CDS |
| TGCACATACTTTGTTGATTA+GGG | 0.234586 | 4.3:+34247257 | None:intergenic |
| GCTGCTTACAAGAAGAAATA+TGG | 0.267605 | 4.3:-34250143 | MS.gene50741:CDS |
| GATGATCGACGATCCAAATT+TGG | 0.272019 | 4.3:-34247094 | MS.gene50741:CDS |
| GAAGGATGGTGACTTCTTAA+TGG | 0.279378 | 4.3:-34249775 | MS.gene50741:CDS |
| TTGCACATACTTTGTTGATT+AGG | 0.299412 | 4.3:+34247256 | None:intergenic |
| CGGTGCTGATGGAGGGAAAA+AGG | 0.321282 | 4.3:-34251580 | MS.gene50741:CDS |
| ACACCCCATGTAGAAACTTT+TGG | 0.326916 | 4.3:+34250392 | None:intergenic |
| GATTAAATCAAACTCTGGTT+TGG | 0.332351 | 4.3:-34251616 | MS.gene50741:CDS |
| CCTTGACCTGTTCAGTTTGG+AGG | 0.348105 | 4.3:-34250248 | MS.gene50741:intron |
| GTCAATGACTTTCTCATAGT+AGG | 0.348199 | 4.3:+34249725 | None:intergenic |
| GCCAAACCTTGTTGAATTCC+CGG | 0.348965 | 4.3:+34247069 | None:intergenic |
| TTTAGAGAGTGAAGAAGAAA+AGG | 0.358296 | 4.3:-34250198 | MS.gene50741:CDS |
| TCATCATCCTTAGTCTGTTC+AGG | 0.364395 | 4.3:+34250431 | None:intergenic |
| TGATTGCAAGGAGACTTTAT+TGG | 0.364633 | 4.3:-34247046 | MS.gene50741:CDS |
| TCTGAGAAGGAGTCTGAAAA+AGG | 0.367037 | 4.3:+34250527 | None:intergenic |
| TTGAGCCACTTCATCTTTAA+CGG | 0.367047 | 4.3:+34248019 | None:intergenic |
| ATTAAATCAAACTCTGGTTT+GGG | 0.367973 | 4.3:-34251615 | MS.gene50741:CDS |
| CCAAACGTGATGCTCAATTA+TGG | 0.371905 | 4.3:-34246975 | MS.gene50741:CDS |
| GACACACATTGTTCCTTGTT+AGG | 0.379344 | 4.3:+34247228 | None:intergenic |
| ATTATGGTTGCAAGCAGCTT+TGG | 0.380601 | 4.3:-34246959 | MS.gene50741:CDS |
| CCCGGGAATTCAACAAGGTT+TGG | 0.385863 | 4.3:-34247070 | MS.gene50741:CDS |
| TGAGCCACTTCATCTTTAAC+GGG | 0.391252 | 4.3:+34248020 | None:intergenic |
| TTCTTGCCTACTTTAACACT+TGG | 0.395553 | 4.3:+34248942 | None:intergenic |
| AAGGAGGGAGTGAGAGTACT+TGG | 0.407449 | 4.3:-34250673 | MS.gene50741:CDS |
| CATTGACAAATTACCCTTCA+AGG | 0.416440 | 4.3:-34249709 | MS.gene50741:intron |
| ATCTGCCATAGCCTTATTAA+CGG | 0.422183 | 4.3:+34246840 | None:intergenic |
| ATTTAGAAGTTTACCTTGAA+GGG | 0.427228 | 4.3:+34249696 | None:intergenic |
| ATTGCAATCTTCACAGAAAC+CGG | 0.441020 | 4.3:+34251552 | None:intergenic |
| TTTGAAATATTGTTAGGTCT+AGG | 0.441867 | 4.3:+34250365 | None:intergenic |
| ATGTGTGTCGGTCCTTTCTT+CGG | 0.442629 | 4.3:-34247214 | MS.gene50741:CDS |
| CCATAATTGAGCATCACGTT+TGG | 0.443848 | 4.3:+34246975 | None:intergenic |
| CACAAAATACTTATCTCTCT+TGG | 0.446702 | 4.3:-34247331 | MS.gene50741:CDS |
| TCCTTAGTCTGTTCAGGCTG+TGG | 0.450969 | 4.3:+34250437 | None:intergenic |
| ATAATATTTATAGGCATTGA+AGG | 0.452788 | 4.3:-34249793 | MS.gene50741:intron |
| TGACAATAGTGTTGGTAAGA+AGG | 0.457261 | 4.3:-34250636 | MS.gene50741:CDS |
| AATTTAGAAGTTTACCTTGA+AGG | 0.460312 | 4.3:+34249695 | None:intergenic |
| GGCTCACTTTGTCCGAAGAA+AGG | 0.464221 | 4.3:+34247202 | None:intergenic |
| AAGGGGATTGCCACCTGGAC+TGG | 0.466766 | 4.3:-34250552 | MS.gene50741:CDS |
| TGACCTGTTCAGTTTGGAGG+TGG | 0.468485 | 4.3:-34250245 | MS.gene50741:intron |
| CCTGAGGTGGAGCTTATTGT+CGG | 0.470019 | 4.3:-34250494 | MS.gene50741:CDS |
| TCAAGAAAGTGAAATCAATC+AGG | 0.474812 | 4.3:-34248000 | MS.gene50741:CDS |
| TCCACAGCCTGAACAGACTA+AGG | 0.482156 | 4.3:-34250438 | MS.gene50741:CDS |
| GACAATAGTGTTGGTAAGAA+GGG | 0.482595 | 4.3:-34250635 | MS.gene50741:CDS |
| TCAATGACTTTCTCATAGTA+GGG | 0.487497 | 4.3:+34249726 | None:intergenic |
| CTTGGTGGTTTAATAAAATG+AGG | 0.494739 | 4.3:+34247301 | None:intergenic |
| GGTGGAAGAACTATACGTCC+TGG | 0.503929 | 4.3:-34250227 | MS.gene50741:CDS |
| TGACTTGTGCAAAGGTAACT+TGG | 0.504835 | 4.3:+34247283 | None:intergenic |
| ACCTGGCTATGATATCACTA+AGG | 0.507932 | 4.3:-34247161 | MS.gene50741:CDS |
| CCAAACCTTGTTGAATTCCC+GGG | 0.508084 | 4.3:+34247070 | None:intergenic |
| ACAAGGTTTGGCTGATTGCA+AGG | 0.508120 | 4.3:-34247058 | MS.gene50741:CDS |
| TCTGTTAGTGAAACTGATCA+AGG | 0.516186 | 4.3:-34251492 | MS.gene50741:intron |
| GTGGCTGCTTCAAACGCGAC+CGG | 0.517348 | 4.3:-34247138 | MS.gene50741:CDS |
| AGGAGGGAGTGAGAGTACTT+GGG | 0.519057 | 4.3:-34250672 | MS.gene50741:CDS |
| TCTTGCCTACTTTAACACTT+GGG | 0.521824 | 4.3:+34248943 | None:intergenic |
| GAATCGATTAAATCAAACTC+TGG | 0.521956 | 4.3:-34251621 | MS.gene50741:CDS |
| ATTGAGCAAAACGGTGCTGA+TGG | 0.524701 | 4.3:-34251591 | MS.gene50741:CDS |
| TATTTATAGGCATTGAAGGA+TGG | 0.534214 | 4.3:-34249789 | MS.gene50741:intron |
| CGACGATCCAAATTTGGACC+CGG | 0.534296 | 4.3:-34247088 | MS.gene50741:CDS |
| AAAGTATAAGCAGAATAAAG+AGG | 0.535033 | 4.3:-34251517 | MS.gene50741:CDS |
| ACAAGCCAAAAGTTTCTACA+TGG | 0.538624 | 4.3:-34250397 | MS.gene50741:CDS |
| TCTCACCCAAGTGTTAAAGT+AGG | 0.553096 | 4.3:-34248948 | MS.gene50741:CDS |
| GTGGAAGAACTATACGTCCT+GGG | 0.553555 | 4.3:-34250226 | MS.gene50741:CDS |
| TGTTGCCGTTAATAAGGCTA+TGG | 0.553919 | 4.3:-34246845 | MS.gene50741:CDS |
| TGGCTGCTTCAAACGCGACC+GGG | 0.555539 | 4.3:-34247137 | MS.gene50741:CDS |
| CTACCCCGTTAAAGATGAAG+TGG | 0.559497 | 4.3:-34248024 | MS.gene50741:CDS |
| ACATGTGATGCTTCAATACC+TGG | 0.560104 | 4.3:-34246925 | MS.gene50741:CDS |
| CCCTTAGTGATATCATAGCC+AGG | 0.560549 | 4.3:+34247160 | None:intergenic |
| TAAATGCATCAAAATAACTC+TGG | 0.561561 | 4.3:+34248063 | None:intergenic |
| GCAGGCTATGGAAATGATGA+AGG | 0.561630 | 4.3:-34248126 | MS.gene50741:intron |
| TGTGAAGATTGCAATGGAGA+AGG | 0.563126 | 4.3:-34251544 | MS.gene50741:CDS |
| CTGCTACGGTATCCTCAAGC+TGG | 0.570832 | 4.3:+34247013 | None:intergenic |
| AAGACAAGGGGATTGCCACC+TGG | 0.573117 | 4.3:-34250557 | MS.gene50741:CDS |
| ATTTGACAAAAGAGCTGCTA+CGG | 0.575602 | 4.3:+34246999 | None:intergenic |
| AGGCAAGTCATCGTCTGAGA+AGG | 0.577048 | 4.3:+34250514 | None:intergenic |
| CCGACAATAAGCTCCACCTC+AGG | 0.579887 | 4.3:+34250494 | None:intergenic |
| AGACGATGACTTGCCTGAGG+TGG | 0.579966 | 4.3:-34250507 | MS.gene50741:CDS |
| AATGGACGCGGGAAAACTGA+AGG | 0.586192 | 4.3:-34249757 | MS.gene50741:CDS |
| AGCAAAACGGTGCTGATGGA+GGG | 0.586859 | 4.3:-34251587 | MS.gene50741:CDS |
| GGAGGGAGTGAGAGTACTTG+GGG | 0.587353 | 4.3:-34250671 | MS.gene50741:CDS |
| GAGCAAAACGGTGCTGATGG+AGG | 0.587753 | 4.3:-34251588 | MS.gene50741:CDS |
| TGGTGACTTCTTAATGGACG+CGG | 0.588889 | 4.3:-34249769 | MS.gene50741:CDS |
| TCACTCTCTAAAATCTCCCC+AGG | 0.590984 | 4.3:+34250209 | None:intergenic |
| ATGTGCAAACTTGCCTAACA+AGG | 0.593346 | 4.3:-34247241 | MS.gene50741:CDS |
| GCACATACTTTGTTGATTAG+GGG | 0.593542 | 4.3:+34247258 | None:intergenic |
| TAGGGGATTGACTTGTGCAA+AGG | 0.596697 | 4.3:+34247275 | None:intergenic |
| CTTGTGCAAAGGTAACTTGG+TGG | 0.598194 | 4.3:+34247286 | None:intergenic |
| AATGTGAATGACAATAGTGT+TGG | 0.608670 | 4.3:-34250644 | MS.gene50741:CDS |
| CTTTGCAAACATACCTACTG+AGG | 0.611061 | 4.3:+34249357 | None:intergenic |
| TTTGTCAAGACTCCCTCAGT+AGG | 0.612816 | 4.3:-34249370 | MS.gene50741:intron |
| TTTCACATCGGATAGTATCC+CGG | 0.614596 | 4.3:+34247119 | None:intergenic |
| GACGATCCAAATTTGGACCC+GGG | 0.614661 | 4.3:-34247087 | MS.gene50741:CDS |
| CAAGCCAAAAGTTTCTACAT+GGG | 0.621826 | 4.3:-34250396 | MS.gene50741:CDS |
| CCTGGCTATGATATCACTAA+GGG | 0.625300 | 4.3:-34247160 | MS.gene50741:CDS |
| GGATGCAGAAAGCCAGCTTG+AGG | 0.627877 | 4.3:-34247025 | MS.gene50741:CDS |
| CTCAGACGATGACTTGCCTG+AGG | 0.631457 | 4.3:-34250510 | MS.gene50741:CDS |
| GGTTTGGGAATTGAGCAAAA+CGG | 0.633600 | 4.3:-34251600 | MS.gene50741:CDS |
| GCCCTGCAGAGTGAGCTACA+TGG | 0.636806 | 4.3:-34249416 | MS.gene50741:intron |
| GAGAGAACATCATCATCACC+AGG | 0.641144 | 4.3:+34246907 | None:intergenic |
| GGTGACTTCTTAATGGACGC+GGG | 0.642391 | 4.3:-34249768 | MS.gene50741:CDS |
| ATGGATTAGCTGCTTTACAG+TGG | 0.643271 | 4.3:-34249397 | MS.gene50741:CDS |
| GGCTATGATATCACTAAGGG+TGG | 0.644684 | 4.3:-34247157 | MS.gene50741:CDS |
| TTGGACCCGGGAATTCAACA+AGG | 0.645065 | 4.3:-34247075 | MS.gene50741:CDS |
| GGTTTCTGTGAAGATTGCAA+TGG | 0.663563 | 4.3:-34251550 | MS.gene50741:CDS |
| TAACAAGGAACAATGTGTGT+CGG | 0.669732 | 4.3:-34247226 | MS.gene50741:CDS |
| TGGAAGAACTATACGTCCTG+GGG | 0.672309 | 4.3:-34250225 | MS.gene50741:CDS |
| AAGCCAAAAGTTTCTACATG+GGG | 0.672588 | 4.3:-34250395 | MS.gene50741:CDS |
| ACAAGCGACTCTAAAAGACC+TGG | 0.672920 | 4.3:-34247178 | MS.gene50741:CDS |
| TTTGCAAACATACCTACTGA+GGG | 0.676039 | 4.3:+34249358 | None:intergenic |
| CGTTGCGCATGAAACCAGCA+AGG | 0.681615 | 4.3:-34251782 | None:intergenic |
| GAGCCACTTCATCTTTAACG+GGG | 0.710162 | 4.3:+34248021 | None:intergenic |
| TATGAACCAAGAAAACAACA+AGG | 0.765280 | 4.3:-34251733 | MS.gene50741:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | ATAAATATAAATAATAGGAT+AGG | + | chr4.3:34249424-34249443 | None:intergenic | 10.0% |
| !! | GAAAAATATTTATTTACAAA+TGG | - | chr4.3:34250071-34250090 | MS.gene50741:intron | 10.0% |
| !! | GAATTCTATATAATATTTAT+AGG | - | chr4.3:34248797-34248816 | MS.gene50741:intron | 10.0% |
| !!! | AAAATTAGAGTATTAATTTA+GGG | + | chr4.3:34251069-34251088 | None:intergenic | 10.0% |
| !!! | TAAAATTAGAGTATTAATTT+AGG | + | chr4.3:34251070-34251089 | None:intergenic | 10.0% |
| !! | CATTAACAATTAAAAAGAAA+TGG | + | chr4.3:34250735-34250754 | None:intergenic | 15.0% |
| !! | GATATTTATATGTATATAGT+AGG | - | chr4.3:34250838-34250857 | MS.gene50741:intron | 15.0% |
| !! | TATTATTTGCAAAGTAAAAT+TGG | + | chr4.3:34250225-34250244 | None:intergenic | 15.0% |
| !! | TCATTACAAAATAAATGTAA+CGG | - | chr4.3:34250017-34250036 | MS.gene50741:intron | 15.0% |
| !! | TTTATGAAACTAATTAATTC+AGG | + | chr4.3:34251210-34251229 | None:intergenic | 15.0% |
| !!! | AAACTATGAAATTTTTAGAA+AGG | - | chr4.3:34250251-34250270 | MS.gene50741:intron | 15.0% |
| !!! | AATAAGATCATACTTATTTT+GGG | + | chr4.3:34247606-34247625 | None:intergenic | 15.0% |
| !!! | CTAAAAAATGCTTTAAAAAA+GGG | + | chr4.3:34249039-34249058 | None:intergenic | 15.0% |
| !!! | TAATAAGATCATACTTATTT+TGG | + | chr4.3:34247607-34247626 | None:intergenic | 15.0% |
| !!! | TATAAACATTGATAATGAAA+AGG | - | chr4.3:34247841-34247860 | MS.gene50741:intron | 15.0% |
| !!! | TTTTACTTTGCAAATAATAA+TGG | - | chr4.3:34250226-34250245 | MS.gene50741:CDS | 15.0% |
| !! | AAACTAGGAAAACATATATA+TGG | - | chr4.3:34249119-34249138 | MS.gene50741:intron | 20.0% |
| !! | ACAACTTAATAGATATGTAT+AGG | - | chr4.3:34250797-34250816 | MS.gene50741:intron | 20.0% |
| !! | ATATAGTGATATAGAGTTAT+TGG | - | chr4.3:34247462-34247481 | MS.gene50741:intron | 20.0% |
| !! | ATTCATGAAATAAATCATGT+TGG | + | chr4.3:34248781-34248800 | None:intergenic | 20.0% |
| !! | TAGGTATAGATAATATAGTT+AGG | + | chr4.3:34249405-34249424 | None:intergenic | 20.0% |
| !! | TCATCAAATCAAAATATGTT+TGG | + | chr4.3:34249587-34249606 | None:intergenic | 20.0% |
| !! | TTATATGTATATAGTAGGAT+AGG | - | chr4.3:34250843-34250862 | MS.gene50741:intron | 20.0% |
| !! | TTATTATAAAACGAAGTCAT+TGG | - | chr4.3:34247645-34247664 | MS.gene50741:intron | 20.0% |
| !! | TTCATGAAATAAATCATGTT+GGG | + | chr4.3:34248780-34248799 | None:intergenic | 20.0% |
| !! | TTTGTTTATAAACTATTGTG+AGG | + | chr4.3:34251185-34251204 | None:intergenic | 20.0% |
| !!! | AATTTATTTTTAGGATTGCA+AGG | - | chr4.3:34247907-34247926 | MS.gene50741:intron | 20.0% |
| !!! | ACTCATTACTTTTCTATTTT+TGG | + | chr4.3:34251023-34251042 | None:intergenic | 20.0% |
| !!! | ACTGTTTTTGAAATATTGTT+AGG | + | chr4.3:34248243-34248262 | None:intergenic | 20.0% |
| !!! | ATAATATTTATAGGCATTGA+AGG | - | chr4.3:34248806-34248825 | MS.gene50741:intron | 20.0% |
| !!! | ATTCTAAAAAATACTTCATG+TGG | - | chr4.3:34250985-34251004 | MS.gene50741:intron | 20.0% |
| !!! | GCTAAAAAATGCTTTAAAAA+AGG | + | chr4.3:34249040-34249059 | None:intergenic | 20.0% |
| !!! | TACTTTTAACACTCTTTAAA+AGG | + | chr4.3:34250101-34250120 | None:intergenic | 20.0% |
| !!! | TATGAAAGTATTGAATTCAA+AGG | + | chr4.3:34250162-34250181 | None:intergenic | 20.0% |
| !!! | TCATCAAACTTTTTTATTTG+TGG | - | chr4.3:34249870-34249889 | MS.gene50741:intron | 20.0% |
| !!! | TTTATTCTGCTTATACTTTT+TGG | + | chr4.3:34247081-34247100 | None:intergenic | 20.0% |
| ! | AAAGTATAAGCAGAATAAAG+AGG | - | chr4.3:34247082-34247101 | MS.gene50741:CDS | 25.0% |
| ! | AAGTGCTTAATTAATGTGTT+AGG | - | chr4.3:34247281-34247300 | MS.gene50741:CDS | 25.0% |
| ! | AATATTCCACAGTAACATTA+TGG | - | chr4.3:34249793-34249812 | MS.gene50741:intron | 25.0% |
| ! | AATTTAGAAGTTTACCTTGA+AGG | + | chr4.3:34248907-34248926 | None:intergenic | 25.0% |
| ! | ACAAGCTTTCATGTAAAAAA+TGG | + | chr4.3:34250185-34250204 | None:intergenic | 25.0% |
| ! | AGAAGTAGTACAACAAAAAT+AGG | + | chr4.3:34250654-34250673 | None:intergenic | 25.0% |
| ! | AGCAAAGAAAATCATTACTA+CGG | + | chr4.3:34250372-34250391 | None:intergenic | 25.0% |
| ! | AGGGTTAAATTGTTTGTAAT+TGG | + | chr4.3:34251151-34251170 | None:intergenic | 25.0% |
| ! | ATTATGTACAAGATGTTTAG+AGG | - | chr4.3:34248924-34248943 | MS.gene50741:CDS | 25.0% |
| ! | ATTTAGAAGTTTACCTTGAA+GGG | + | chr4.3:34248906-34248925 | None:intergenic | 25.0% |
| ! | GCTTATAGAAAATATGCTTA+TGG | - | chr4.3:34247365-34247384 | MS.gene50741:intron | 25.0% |
| ! | GGTAAACATATCATATCTAT+TGG | - | chr4.3:34248518-34248537 | MS.gene50741:intron | 25.0% |
| ! | TAAATGCATCAAAATAACTC+TGG | + | chr4.3:34250539-34250558 | None:intergenic | 25.0% |
| ! | TAATCAAAGACATCAACTAA+TGG | + | chr4.3:34247690-34247709 | None:intergenic | 25.0% |
| ! | TATGACATAAGATTGGAATT+TGG | - | chr4.3:34250867-34250886 | MS.gene50741:intron | 25.0% |
| ! | TCAACATAGAAGAAAAAGAA+TGG | - | chr4.3:34251241-34251260 | MS.gene50741:intron | 25.0% |
| ! | TCAAGGTAATAATTATGAAC+TGG | - | chr4.3:34247124-34247143 | MS.gene50741:CDS | 25.0% |
| ! | TGAAACAAAGTTTAAGTACA+AGG | + | chr4.3:34250347-34250366 | None:intergenic | 25.0% |
| ! | TGCAAAGTAAAATTGGATAA+TGG | + | chr4.3:34250218-34250237 | None:intergenic | 25.0% |
| ! | TTGCAATATTTGTTTGCATA+TGG | - | chr4.3:34248598-34248617 | MS.gene50741:intron | 25.0% |
| !! | AAAGGATGGTAAGAATATTT+TGG | + | chr4.3:34248548-34248567 | None:intergenic | 25.0% |
| !! | AAGGATGGTAAGAATATTTT+GGG | + | chr4.3:34248547-34248566 | None:intergenic | 25.0% |
| !! | AGAATTTTCTGTTTCAAAGA+TGG | - | chr4.3:34247987-34248006 | MS.gene50741:intron | 25.0% |
| !! | ATCTATTAAGTTGTTCAAAC+TGG | + | chr4.3:34250791-34250810 | None:intergenic | 25.0% |
| !! | ATTAAATCAAACTCTGGTTT+GGG | - | chr4.3:34246984-34247003 | MS.gene50741:CDS | 25.0% |
| !! | GGTGTTTTGCTTATTATTTA+TGG | - | chr4.3:34249531-34249550 | MS.gene50741:intron | 25.0% |
| !! | TTAATTTTACAGTGTAATGC+AGG | + | chr4.3:34249941-34249960 | None:intergenic | 25.0% |
| !! | TTATTAAACGCAAGCTTTAT+AGG | + | chr4.3:34246942-34246961 | None:intergenic | 25.0% |
| !! | TTTGAAATATTGTTAGGTCT+AGG | + | chr4.3:34248237-34248256 | None:intergenic | 25.0% |
| !!! | ATTTTGATTTGATGATTGAC+AGG | - | chr4.3:34249592-34249611 | MS.gene50741:intron | 25.0% |
| !!! | TTCTATTTTTGGCTAAACTA+GGG | + | chr4.3:34251012-34251031 | None:intergenic | 25.0% |
| !!! | TTCTTAACTTGTTGAAATGA+AGG | - | chr4.3:34248699-34248718 | MS.gene50741:intron | 25.0% |
| !!! | TTTCTATTTTTGGCTAAACT+AGG | + | chr4.3:34251013-34251032 | None:intergenic | 25.0% |
| AAGGAAAGGGTAAATTTGAA+AGG | + | chr4.3:34248331-34248350 | None:intergenic | 30.0% | |
| AATGTGAATGACAATAGTGT+TGG | - | chr4.3:34247955-34247974 | MS.gene50741:intron | 30.0% | |
| ACAAAGCTAGATCGAAATAT+AGG | + | chr4.3:34250306-34250325 | None:intergenic | 30.0% | |
| ACATAAGATTGGAATTTGGA+TGG | - | chr4.3:34250871-34250890 | MS.gene50741:intron | 30.0% | |
| ATGTAGTGTATCATTAGCAA+TGG | - | chr4.3:34248666-34248685 | MS.gene50741:intron | 30.0% | |
| ATTGTTAATGATCAAGTCCT+TGG | - | chr4.3:34250745-34250764 | MS.gene50741:intron | 30.0% | |
| CACAAAATACTTATCTCTCT+TGG | - | chr4.3:34251268-34251287 | MS.gene50741:intron | 30.0% | |
| CATATATATGGAGGATTTAG+AGG | - | chr4.3:34249131-34249150 | MS.gene50741:intron | 30.0% | |
| CATTGAACTCAATAAAGACA+GGG | + | chr4.3:34249741-34249760 | None:intergenic | 30.0% | |
| CCAACTAATACAAACCAAAA+GGG | - | chr4.3:34249002-34249021 | MS.gene50741:intron | 30.0% | |
| CTAGGAAAACATATATATGG+AGG | - | chr4.3:34249122-34249141 | MS.gene50741:intron | 30.0% | |
| GAAAAAACACGCTAAAAAGA+AGG | + | chr4.3:34248571-34248590 | None:intergenic | 30.0% | |
| GAATCGATTAAATCAAACTC+TGG | - | chr4.3:34246978-34246997 | MS.gene50741:CDS | 30.0% | |
| GATAGGATATGACATAAGAT+TGG | - | chr4.3:34250860-34250879 | MS.gene50741:intron | 30.0% | |
| GATTAAATCAAACTCTGGTT+TGG | - | chr4.3:34246983-34247002 | MS.gene50741:CDS | 30.0% | |
| GTAACCATCCAATAAAATTG+AGG | - | chr4.3:34251111-34251130 | MS.gene50741:intron | 30.0% | |
| TATGAACCAAGAAAACAACA+AGG | - | chr4.3:34246866-34246885 | MS.gene50741:CDS | 30.0% | |
| TCAAGAAAGTGAAATCAATC+AGG | - | chr4.3:34250599-34250618 | MS.gene50741:CDS | 30.0% | |
| TCAATGACTTTCTCATAGTA+GGG | + | chr4.3:34248876-34248895 | None:intergenic | 30.0% | |
| TCATTGAACTCAATAAAGAC+AGG | + | chr4.3:34249742-34249761 | None:intergenic | 30.0% | |
| TGATGAGTATATGCACTAAT+AGG | + | chr4.3:34249856-34249875 | None:intergenic | 30.0% | |
| TTTAGAGAGTGAAGAAGAAA+AGG | - | chr4.3:34248401-34248420 | MS.gene50741:intron | 30.0% | |
| ! | CTTGGTGGTTTAATAAAATG+AGG | + | chr4.3:34251301-34251320 | None:intergenic | 30.0% |
| ! | TAGCATAAGCAAAGTACTTA+TGG | + | chr4.3:34247260-34247279 | None:intergenic | 30.0% |
| ! | TGCACATACTTTGTTGATTA+GGG | + | chr4.3:34251345-34251364 | None:intergenic | 30.0% |
| ! | TTGACCTCAATTTTATTGGA+TGG | + | chr4.3:34251118-34251137 | None:intergenic | 30.0% |
| ! | TTGCACATACTTTGTTGATT+AGG | + | chr4.3:34251346-34251365 | None:intergenic | 30.0% |
| !! | AATGAAAAGGTGTGTACTTT+TGG | - | chr4.3:34247854-34247873 | MS.gene50741:intron | 30.0% |
| !! | GGGTGTCTGAATTTATTTTT+AGG | - | chr4.3:34247898-34247917 | MS.gene50741:intron | 30.0% |
| !! | GTTTCAAAGATGGATTTTGT+GGG | - | chr4.3:34247997-34248016 | MS.gene50741:CDS | 30.0% |
| !! | TATTTATAGGCATTGAAGGA+TGG | - | chr4.3:34248810-34248829 | MS.gene50741:intron | 30.0% |
| !! | TGTTTCAAAGATGGATTTTG+TGG | - | chr4.3:34247996-34248015 | MS.gene50741:CDS | 30.0% |
| !! | TTTCAAAGATGGATTTTGTG+GGG | - | chr4.3:34247998-34248017 | MS.gene50741:CDS | 30.0% |
| !!! | AAGATTCCTTGTTGTTTTCT+TGG | + | chr4.3:34246875-34246894 | None:intergenic | 30.0% |
| !!! | GTTTTTTCTGCAAGAAGATT+TGG | + | chr4.3:34248282-34248301 | None:intergenic | 30.0% |
| !!! | TATTTTTAGGATTGCAAGGA+GGG | - | chr4.3:34247911-34247930 | MS.gene50741:intron | 30.0% |
| !!! | TTATTTTTAGGATTGCAAGG+AGG | - | chr4.3:34247910-34247929 | MS.gene50741:intron | 30.0% |
| AAAGCTAAAAATCGAATGCG+AGG | - | chr4.3:34248494-34248513 | MS.gene50741:intron | 35.0% | |
| AACACGCTAAAAAGAAGGAA+AGG | + | chr4.3:34248566-34248585 | None:intergenic | 35.0% | |
| AACCAGCAAGGTTAAAAACT+AGG | - | chr4.3:34246829-34246848 | MS.gene50741:CDS | 35.0% | |
| AACCTTGCATATGCATATTG+GGG | + | chr4.3:34249332-34249351 | None:intergenic | 35.0% | |
| AACTCAATAAAGACAGGGTA+AGG | + | chr4.3:34249736-34249755 | None:intergenic | 35.0% | |
| AAGCCAAAAGTTTCTACATG+GGG | - | chr4.3:34248204-34248223 | MS.gene50741:intron | 35.0% | |
| ACAACCTTGCATATGCATAT+TGG | + | chr4.3:34249334-34249353 | None:intergenic | 35.0% | |
| ACAAGCCAAAAGTTTCTACA+TGG | - | chr4.3:34248202-34248221 | MS.gene50741:intron | 35.0% | |
| ACAATTCATGTACAGCTTTC+AGG | - | chr4.3:34249686-34249705 | MS.gene50741:intron | 35.0% | |
| ACATTATGGTGAGATGTGAT+TGG | - | chr4.3:34249807-34249826 | MS.gene50741:intron | 35.0% | |
| AGTCTATGTAGAACATAGCA+TGG | + | chr4.3:34249301-34249320 | None:intergenic | 35.0% | |
| AGTTAGGTTTCAGCAAAGAA+AGG | + | chr4.3:34249389-34249408 | None:intergenic | 35.0% | |
| ATCTCACCATAATGTTACTG+TGG | + | chr4.3:34249802-34249821 | None:intergenic | 35.0% | |
| ATGTACAAGATGTTTAGAGG+TGG | - | chr4.3:34248927-34248946 | MS.gene50741:CDS | 35.0% | |
| ATTGCAATCTTCACAGAAAC+CGG | + | chr4.3:34247050-34247069 | None:intergenic | 35.0% | |
| ATTGTGAGGAAACTTAGTAG+AGG | + | chr4.3:34251171-34251190 | None:intergenic | 35.0% | |
| ATTTGACAAAAGAGCTGCTA+CGG | + | chr4.3:34251603-34251622 | None:intergenic | 35.0% | |
| CAACCTTGCATATGCATATT+GGG | + | chr4.3:34249333-34249352 | None:intergenic | 35.0% | |
| CAAGCCAAAAGTTTCTACAT+GGG | - | chr4.3:34248203-34248222 | MS.gene50741:intron | 35.0% | |
| CACAAACAATTGGACTATCT+AGG | + | chr4.3:34248304-34248323 | None:intergenic | 35.0% | |
| CATTGACAAATTACCCTTCA+AGG | - | chr4.3:34248890-34248909 | MS.gene50741:intron | 35.0% | |
| CCACAAATAGTGAAGAGATA+GGG | + | chr4.3:34247396-34247415 | None:intergenic | 35.0% | |
| GCATTCAGAGAGATGATATT+AGG | + | chr4.3:34248983-34249002 | None:intergenic | 35.0% | |
| GCCAACTAATACAAACCAAA+AGG | - | chr4.3:34249001-34249020 | MS.gene50741:intron | 35.0% | |
| GCTGCTTACAAGAAGAAATA+TGG | - | chr4.3:34248456-34248475 | MS.gene50741:intron | 35.0% | |
| GCTTATATATGAACTCTTGC+AGG | - | chr4.3:34250455-34250474 | MS.gene50741:CDS | 35.0% | |
| GTCAATGACTTTCTCATAGT+AGG | + | chr4.3:34248877-34248896 | None:intergenic | 35.0% | |
| TAACAAGGAACAATGTGTGT+CGG | - | chr4.3:34251373-34251392 | MS.gene50741:intron | 35.0% | |
| TATTCAATCTCTGTGTTCCA+AGG | + | chr4.3:34250765-34250784 | None:intergenic | 35.0% | |
| TCATGACATATACTCTAGCA+GGG | - | chr4.3:34249096-34249115 | MS.gene50741:intron | 35.0% | |
| TCTGTTAGTGAAACTGATCA+AGG | - | chr4.3:34247107-34247126 | MS.gene50741:CDS | 35.0% | |
| TCTTGCCTACTTTAACACTT+GGG | + | chr4.3:34249659-34249678 | None:intergenic | 35.0% | |
| TGATTGCAAGGAGACTTTAT+TGG | - | chr4.3:34251553-34251572 | MS.gene50741:CDS | 35.0% | |
| TGTACAAGATGTTTAGAGGT+GGG | - | chr4.3:34248928-34248947 | MS.gene50741:CDS | 35.0% | |
| TGTAGCCAAAGATACAACAA+TGG | - | chr4.3:34247780-34247799 | MS.gene50741:intron | 35.0% | |
| TGTATCTTTGGCTACAATTG+AGG | + | chr4.3:34247776-34247795 | None:intergenic | 35.0% | |
| TTAGGCCATTGTTGTATCTT+TGG | + | chr4.3:34247788-34247807 | None:intergenic | 35.0% | |
| TTAGTGAACGAAGTCATAGA+TGG | + | chr4.3:34249481-34249500 | None:intergenic | 35.0% | |
| TTCGGACAAAAAGAAGACAA+GGG | - | chr4.3:34248029-34248048 | MS.gene50741:CDS | 35.0% | |
| TTCTTGCCTACTTTAACACT+TGG | + | chr4.3:34249660-34249679 | None:intergenic | 35.0% | |
| TTGAGCCACTTCATCTTTAA+CGG | + | chr4.3:34250583-34250602 | None:intergenic | 35.0% | |
| TTGTGAGGAAACTTAGTAGA+GGG | + | chr4.3:34251170-34251189 | None:intergenic | 35.0% | |
| TTTCGGACAAAAAGAAGACA+AGG | - | chr4.3:34248028-34248047 | MS.gene50741:CDS | 35.0% | |
| TTTGCAAACATACCTACTGA+GGG | + | chr4.3:34249244-34249263 | None:intergenic | 35.0% | |
| ! | GCACATACTTTGTTGATTAG+GGG | + | chr4.3:34251344-34251363 | None:intergenic | 35.0% |
| ! | GTCGATCATCATTTTCACAT+CGG | + | chr4.3:34251495-34251514 | None:intergenic | 35.0% |
| ! | TTGCTTCACCTATTTTGCAT+CGG | - | chr4.3:34247326-34247345 | MS.gene50741:CDS | 35.0% |
| !! | AAGGTTGTTATTTCAGACTG+GGG | - | chr4.3:34249346-34249365 | MS.gene50741:intron | 35.0% |
| !! | ATCTGCCATAGCCTTATTAA+CGG | + | chr4.3:34251762-34251781 | None:intergenic | 35.0% |
| !! | CAAGGTTGTTATTTCAGACT+GGG | - | chr4.3:34249345-34249364 | MS.gene50741:intron | 35.0% |
| !! | GAAAGGCATTCACAAACAAT+TGG | + | chr4.3:34248314-34248333 | None:intergenic | 35.0% |
| !! | GACAATAGTGTTGGTAAGAA+GGG | - | chr4.3:34247964-34247983 | MS.gene50741:intron | 35.0% |
| !! | TGACAATAGTGTTGGTAAGA+AGG | - | chr4.3:34247963-34247982 | MS.gene50741:intron | 35.0% |
| !! | TTCCTAGTTTTTAACCTTGC+TGG | + | chr4.3:34246834-34246853 | None:intergenic | 35.0% |
| !! | TTGAAATGAAGGCATTCACT+TGG | - | chr4.3:34248710-34248729 | MS.gene50741:intron | 35.0% |
| !!! | ACTTATTTTGGGTGCTTAAG+TGG | + | chr4.3:34247595-34247614 | None:intergenic | 35.0% |
| !!! | CCCTTTTGGTTTGTATTAGT+TGG | + | chr4.3:34249005-34249024 | None:intergenic | 35.0% |
| !!! | CTTATTTTGGGTGCTTAAGT+GGG | + | chr4.3:34247594-34247613 | None:intergenic | 35.0% |
| !!! | TCGCATTCGATTTTTAGCTT+TGG | + | chr4.3:34248495-34248514 | None:intergenic | 35.0% |
| !!! | TTATTTTGGGTGCTTAAGTG+GGG | + | chr4.3:34247593-34247612 | None:intergenic | 35.0% |
| ACATGTGATGCTTCAATACC+TGG | - | chr4.3:34251674-34251693 | MS.gene50741:CDS | 40.0% | |
| ACCTGGCTATGATATCACTA+AGG | - | chr4.3:34251438-34251457 | MS.gene50741:intron | 40.0% | |
| AGAAGCAACAAGCAAGTAAG+TGG | - | chr4.3:34251089-34251108 | MS.gene50741:intron | 40.0% | |
| AGTGTTAGATGATGTCTACG+AGG | - | chr4.3:34247714-34247733 | MS.gene50741:intron | 40.0% | |
| ATAAAGTGCAACCACAATCG+TGG | + | chr4.3:34247818-34247837 | None:intergenic | 40.0% | |
| ATATGAACTCTTGCAGGCTA+TGG | - | chr4.3:34250461-34250480 | MS.gene50741:CDS | 40.0% | |
| ATGTGCAAACTTGCCTAACA+AGG | - | chr4.3:34251358-34251377 | MS.gene50741:intron | 40.0% | |
| ATTATGGTTGCAAGCAGCTT+TGG | - | chr4.3:34251640-34251659 | MS.gene50741:CDS | 40.0% | |
| CACAATCGTGGTAGCAATTT+AGG | + | chr4.3:34247806-34247825 | None:intergenic | 40.0% | |
| CCAAACGTGATGCTCAATTA+TGG | - | chr4.3:34251624-34251643 | MS.gene50741:CDS | 40.0% | |
| CCATAATTGAGCATCACGTT+TGG | + | chr4.3:34251627-34251646 | None:intergenic | 40.0% | |
| CCCTATCTCTTCACTATTTG+TGG | - | chr4.3:34247393-34247412 | MS.gene50741:intron | 40.0% | |
| CCTATACTTCCAAGTCAAAG+AGG | + | chr4.3:34249513-34249532 | None:intergenic | 40.0% | |
| CCTGGCTATGATATCACTAA+GGG | - | chr4.3:34251439-34251458 | MS.gene50741:intron | 40.0% | |
| CGCTAAAAAGAAGGAAAGGA+TGG | + | chr4.3:34248562-34248581 | None:intergenic | 40.0% | |
| CTAAATTGCTACCACGATTG+TGG | - | chr4.3:34247804-34247823 | MS.gene50741:intron | 40.0% | |
| CTTTGCAAACATACCTACTG+AGG | + | chr4.3:34249245-34249264 | None:intergenic | 40.0% | |
| GAAGGATGGTGACTTCTTAA+TGG | - | chr4.3:34248824-34248843 | MS.gene50741:intron | 40.0% | |
| GACACACATTGTTCCTTGTT+AGG | + | chr4.3:34251374-34251393 | None:intergenic | 40.0% | |
| GATGATCGACGATCCAAATT+TGG | - | chr4.3:34251505-34251524 | MS.gene50741:CDS | 40.0% | |
| GCCACAAATAGTGAAGAGAT+AGG | + | chr4.3:34247397-34247416 | None:intergenic | 40.0% | |
| GGTTTCTGTGAAGATTGCAA+TGG | - | chr4.3:34247049-34247068 | MS.gene50741:CDS | 40.0% | |
| GGTTTGGGAATTGAGCAAAA+CGG | - | chr4.3:34246999-34247018 | MS.gene50741:CDS | 40.0% | |
| GTACAAGATGTTTAGAGGTG+GGG | - | chr4.3:34248929-34248948 | MS.gene50741:CDS | 40.0% | |
| GTCATGACATATACTCTAGC+AGG | - | chr4.3:34249095-34249114 | MS.gene50741:intron | 40.0% | |
| TACAAGATGTTTAGAGGTGG+GGG | - | chr4.3:34248930-34248949 | MS.gene50741:CDS | 40.0% | |
| TATAAGCACCCAATTACCTC+CGG | + | chr4.3:34247352-34247371 | None:intergenic | 40.0% | |
| TATACTCTAGCAGGGAAACT+AGG | - | chr4.3:34249104-34249123 | MS.gene50741:intron | 40.0% | |
| TCATCATCCTTAGTCTGTTC+AGG | + | chr4.3:34248171-34248190 | None:intergenic | 40.0% | |
| TCCCTTCCTAAAAATGGCAA+GGG | + | chr4.3:34250927-34250946 | None:intergenic | 40.0% | |
| TCGGACAAAAAGAAGACAAG+GGG | - | chr4.3:34248030-34248049 | MS.gene50741:CDS | 40.0% | |
| TCTCACCCAAGTGTTAAAGT+AGG | - | chr4.3:34249651-34249670 | MS.gene50741:intron | 40.0% | |
| TCTGAGAAGGAGTCTGAAAA+AGG | + | chr4.3:34248075-34248094 | None:intergenic | 40.0% | |
| TGAGCCACTTCATCTTTAAC+GGG | + | chr4.3:34250582-34250601 | None:intergenic | 40.0% | |
| TGTGAAGATTGCAATGGAGA+AGG | - | chr4.3:34247055-34247074 | MS.gene50741:CDS | 40.0% | |
| TGTTGCCGTTAATAAGGCTA+TGG | - | chr4.3:34251754-34251773 | MS.gene50741:CDS | 40.0% | |
| TTTCACATCGGATAGTATCC+CGG | + | chr4.3:34251483-34251502 | None:intergenic | 40.0% | |
| ! | ACACCCCATGTAGAAACTTT+TGG | + | chr4.3:34248210-34248229 | None:intergenic | 40.0% |
| ! | CATTGCTGTTGCCGTTAATA+AGG | - | chr4.3:34251748-34251767 | MS.gene50741:CDS | 40.0% |
| ! | GCGCTTGACCTCAATTTTAT+TGG | + | chr4.3:34251122-34251141 | None:intergenic | 40.0% |
| ! | GGGCAAACAAAATACCCTTT+TGG | + | chr4.3:34249019-34249038 | None:intergenic | 40.0% |
| ! | TGACTTGTGCAAAGGTAACT+TGG | + | chr4.3:34251319-34251338 | None:intergenic | 40.0% |
| !! | ATGGATTAGCTGCTTTACAG+TGG | - | chr4.3:34249202-34249221 | MS.gene50741:intron | 40.0% |
| !! | CCTCTTTGACTTGGAAGTAT+AGG | - | chr4.3:34249510-34249529 | MS.gene50741:intron | 40.0% |
| !! | GCAAGGTTGTTATTTCAGAC+TGG | - | chr4.3:34249344-34249363 | MS.gene50741:intron | 40.0% |
| !! | TTGTTATTTCAGACTGGGGA+CGG | - | chr4.3:34249350-34249369 | MS.gene50741:intron | 40.0% |
| !!! | AACCCTTGCCATTTTTAGGA+AGG | - | chr4.3:34250922-34250941 | MS.gene50741:intron | 40.0% |
| !!! | ACCCTTGCCATTTTTAGGAA+GGG | - | chr4.3:34250923-34250942 | MS.gene50741:intron | 40.0% |
| !!! | TCTCAACCCTTGCCATTTTT+AGG | - | chr4.3:34250918-34250937 | MS.gene50741:intron | 40.0% |
| ACAAGGTTTGGCTGATTGCA+AGG | - | chr4.3:34251541-34251560 | MS.gene50741:CDS | 45.0% | |
| CAAACTGAACAGGTCAAGGA+AGG | + | chr4.3:34248350-34248369 | None:intergenic | 45.0% | |
| CATGCGGTTCGTGCTAAAAT+GGG | - | chr4.3:34247878-34247897 | MS.gene50741:intron | 45.0% | |
| CCAAACCTTGTTGAATTCCC+GGG | + | chr4.3:34251532-34251551 | None:intergenic | 45.0% | |
| CCCTTAGTGATATCATAGCC+AGG | + | chr4.3:34251442-34251461 | None:intergenic | 45.0% | |
| CGCATCAATCGAAGTTATCG+AGG | + | chr4.3:34247752-34247771 | None:intergenic | 45.0% | |
| CTACCATAGCCTCTTTGACT+TGG | - | chr4.3:34249501-34249520 | MS.gene50741:intron | 45.0% | |
| CTACCCCGTTAAAGATGAAG+TGG | - | chr4.3:34250575-34250594 | MS.gene50741:CDS | 45.0% | |
| CTCCCCAATATGCATATGCA+AGG | - | chr4.3:34249327-34249346 | MS.gene50741:intron | 45.0% | |
| CTCCCTTCCTAAAAATGGCA+AGG | + | chr4.3:34250928-34250947 | None:intergenic | 45.0% | |
| CTTCCAAGTCAAAGAGGCTA+TGG | + | chr4.3:34249507-34249526 | None:intergenic | 45.0% | |
| CTTCCTTGACCTGTTCAGTT+TGG | - | chr4.3:34248348-34248367 | MS.gene50741:intron | 45.0% | |
| CTTGTGCAAAGGTAACTTGG+TGG | + | chr4.3:34251316-34251335 | None:intergenic | 45.0% | |
| GAACAGGTCAAGGAAGGAAA+GGG | + | chr4.3:34248344-34248363 | None:intergenic | 45.0% | |
| GACCTCTCCCTTCCTAAAAA+TGG | + | chr4.3:34250933-34250952 | None:intergenic | 45.0% | |
| GAGAGAACATCATCATCACC+AGG | + | chr4.3:34251695-34251714 | None:intergenic | 45.0% | |
| GAGCCACTTCATCTTTAACG+GGG | + | chr4.3:34250581-34250600 | None:intergenic | 45.0% | |
| GCAGGCTATGGAAATGATGA+AGG | - | chr4.3:34250473-34250492 | MS.gene50741:CDS | 45.0% | |
| GCCAAACCTTGTTGAATTCC+CGG | + | chr4.3:34251533-34251552 | None:intergenic | 45.0% | |
| GCTAAAAATCGAATGCGAGG+AGG | - | chr4.3:34248497-34248516 | MS.gene50741:intron | 45.0% | |
| GGCTATGATATCACTAAGGG+TGG | - | chr4.3:34251442-34251461 | MS.gene50741:intron | 45.0% | |
| GTGGAAGAACTATACGTCCT+GGG | - | chr4.3:34248373-34248392 | MS.gene50741:intron | 45.0% | |
| TAGGAAGGGAGAGGTCATAT+AGG | - | chr4.3:34250937-34250956 | MS.gene50741:intron | 45.0% | |
| TCATGCGGTTCGTGCTAAAA+TGG | - | chr4.3:34247877-34247896 | MS.gene50741:intron | 45.0% | |
| TCTGAAAAAGGAACCAGTCC+AGG | + | chr4.3:34248063-34248082 | None:intergenic | 45.0% | |
| TGAACAGGTCAAGGAAGGAA+AGG | + | chr4.3:34248345-34248364 | None:intergenic | 45.0% | |
| TGAATTCCCGGGTCCAAATT+TGG | + | chr4.3:34251521-34251540 | None:intergenic | 45.0% | |
| TGGAAGAACTATACGTCCTG+GGG | - | chr4.3:34248374-34248393 | MS.gene50741:intron | 45.0% | |
| TGGAGGGAAAAAGGATTTGC+CGG | - | chr4.3:34247028-34247047 | MS.gene50741:CDS | 45.0% | |
| TTTGTCAAGACTCCCTCAGT+AGG | - | chr4.3:34249229-34249248 | MS.gene50741:intron | 45.0% | |
| ! | ACAAGCGACTCTAAAAGACC+TGG | - | chr4.3:34251421-34251440 | MS.gene50741:intron | 45.0% |
| ! | ATGTGTGTCGGTCCTTTCTT+CGG | - | chr4.3:34251385-34251404 | MS.gene50741:intron | 45.0% |
| ! | ATTGAGCAAAACGGTGCTGA+TGG | - | chr4.3:34247008-34247027 | MS.gene50741:CDS | 45.0% |
| ! | GGTGTGTACTTTTGGTCATG+CGG | - | chr4.3:34247862-34247881 | MS.gene50741:intron | 45.0% |
| ! | TGGTGACTTCTTAATGGACG+CGG | - | chr4.3:34248830-34248849 | MS.gene50741:intron | 45.0% |
| !! | AAGATGGATTTTGTGGGGCT+TGG | - | chr4.3:34248003-34248022 | MS.gene50741:CDS | 45.0% |
| !! | TAGGGGATTGACTTGTGCAA+AGG | + | chr4.3:34251327-34251346 | None:intergenic | 45.0% |
| !! | TCACTCTCTAAAATCTCCCC+AGG | + | chr4.3:34248393-34248412 | None:intergenic | 45.0% |
| !! | TGTTATTTCAGACTGGGGAC+GGG | - | chr4.3:34249351-34249370 | MS.gene50741:intron | 45.0% |
| !! | TTCACCTATTTTGCATCGGC+CGG | - | chr4.3:34247330-34247349 | MS.gene50741:CDS | 45.0% |
| !! | TTTTGTGGGGCTTGGCTTTT+CGG | - | chr4.3:34248011-34248030 | MS.gene50741:CDS | 45.0% |
| !!! | GGTCTTTTAGAGTCGCTTGT+TGG | + | chr4.3:34251421-34251440 | None:intergenic | 45.0% |
| !!! | TGCCATTTTTAGGAAGGGAG+AGG | - | chr4.3:34250928-34250947 | MS.gene50741:intron | 45.0% |
| !! | TAAGAATAAATATAAATAAT+AGG | + | chr4.3:34249429-34249448 | None:intergenic | 5.0% |
| !! | TAGTAAAATTTATTAAATAA+CGG | + | chr4.3:34247419-34247438 | None:intergenic | 5.0% |
| !!! | ATATTAAATCAAAATATTTT+TGG | - | chr4.3:34249972-34249991 | MS.gene50741:intron | 5.0% |
| AATGGACGCGGGAAAACTGA+AGG | - | chr4.3:34248842-34248861 | MS.gene50741:intron | 50.0% | |
| AGGCAAGTCATCGTCTGAGA+AGG | + | chr4.3:34248088-34248107 | None:intergenic | 50.0% | |
| ATCCATGTAGCTCACTCTGC+AGG | + | chr4.3:34249188-34249207 | None:intergenic | 50.0% | |
| CCCGGGAATTCAACAAGGTT+TGG | - | chr4.3:34251529-34251548 | MS.gene50741:CDS | 50.0% | |
| CCTCCAAACTGAACAGGTCA+AGG | + | chr4.3:34248354-34248373 | None:intergenic | 50.0% | |
| CCTGAGGTGGAGCTTATTGT+CGG | - | chr4.3:34248105-34248124 | MS.gene50741:CDS | 50.0% | |
| CCTTGACCTGTTCAGTTTGG+AGG | - | chr4.3:34248351-34248370 | MS.gene50741:intron | 50.0% | |
| CGACGATCCAAATTTGGACC+CGG | - | chr4.3:34251511-34251530 | MS.gene50741:CDS | 50.0% | |
| CTTCCACCTCCAAACTGAAC+AGG | + | chr4.3:34248360-34248379 | None:intergenic | 50.0% | |
| GAAAAAGGAACCAGTCCAGG+TGG | + | chr4.3:34248060-34248079 | None:intergenic | 50.0% | |
| GACGATCCAAATTTGGACCC+GGG | - | chr4.3:34251512-34251531 | MS.gene50741:CDS | 50.0% | |
| GGCTCACTTTGTCCGAAGAA+AGG | + | chr4.3:34251400-34251419 | None:intergenic | 50.0% | |
| GGTGGAAGAACTATACGTCC+TGG | - | chr4.3:34248372-34248391 | MS.gene50741:intron | 50.0% | |
| TCCACAGCCTGAACAGACTA+AGG | - | chr4.3:34248161-34248180 | MS.gene50741:intron | 50.0% | |
| TCCATGTAGCTCACTCTGCA+GGG | + | chr4.3:34249187-34249206 | None:intergenic | 50.0% | |
| TCCTTAGTCTGTTCAGGCTG+TGG | + | chr4.3:34248165-34248184 | None:intergenic | 50.0% | |
| TGACCTGTTCAGTTTGGAGG+TGG | - | chr4.3:34248354-34248373 | MS.gene50741:intron | 50.0% | |
| TTATTTCAGACTGGGGACGG+GGG | - | chr4.3:34249353-34249372 | MS.gene50741:intron | 50.0% | |
| TTGGACCCGGGAATTCAACA+AGG | - | chr4.3:34251524-34251543 | MS.gene50741:CDS | 50.0% | |
| ! | GGTGACTTCTTAATGGACGC+GGG | - | chr4.3:34248831-34248850 | MS.gene50741:intron | 50.0% |
| ! | GTTATTTCAGACTGGGGACG+GGG | - | chr4.3:34249352-34249371 | MS.gene50741:intron | 50.0% |
| !! | AAGGAGGGAGTGAGAGTACT+TGG | - | chr4.3:34247926-34247945 | MS.gene50741:intron | 50.0% |
| !! | AGCAAAACGGTGCTGATGGA+GGG | - | chr4.3:34247012-34247031 | MS.gene50741:CDS | 50.0% |
| !! | AGGAGGGAGTGAGAGTACTT+GGG | - | chr4.3:34247927-34247946 | MS.gene50741:intron | 50.0% |
| AAGACAAGGGGATTGCCACC+TGG | - | chr4.3:34248042-34248061 | MS.gene50741:CDS | 55.0% | |
| ACCTCCGGCCGATGCAAAAT+AGG | + | chr4.3:34247337-34247356 | None:intergenic | 55.0% | |
| CCGACAATAAGCTCCACCTC+AGG | + | chr4.3:34248108-34248127 | None:intergenic | 55.0% | |
| CTGCTACGGTATCCTCAAGC+TGG | + | chr4.3:34251589-34251608 | None:intergenic | 55.0% | |
| GGATGCAGAAAGCCAGCTTG+AGG | - | chr4.3:34251574-34251593 | MS.gene50741:CDS | 55.0% | |
| ! | AGACGATGACTTGCCTGAGG+TGG | - | chr4.3:34248092-34248111 | MS.gene50741:CDS | 55.0% |
| ! | CTCAGACGATGACTTGCCTG+AGG | - | chr4.3:34248089-34248108 | MS.gene50741:CDS | 55.0% |
| ! | TGCATCGGCCGGAGGTAATT+GGG | - | chr4.3:34247341-34247360 | MS.gene50741:CDS | 55.0% |
| ! | TTGCATCGGCCGGAGGTAAT+TGG | - | chr4.3:34247340-34247359 | MS.gene50741:CDS | 55.0% |
| !! | ACCTATTTTGCATCGGCCGG+AGG | - | chr4.3:34247333-34247352 | MS.gene50741:CDS | 55.0% |
| !! | CGGTGCTGATGGAGGGAAAA+AGG | - | chr4.3:34247019-34247038 | MS.gene50741:CDS | 55.0% |
| !! | GAGCAAAACGGTGCTGATGG+AGG | - | chr4.3:34247011-34247030 | MS.gene50741:CDS | 55.0% |
| !! | GGAGGGAGTGAGAGTACTTG+GGG | - | chr4.3:34247928-34247947 | MS.gene50741:intron | 55.0% |
| AAGGGGATTGCCACCTGGAC+TGG | - | chr4.3:34248047-34248066 | MS.gene50741:CDS | 60.0% | |
| GCCCTGCAGAGTGAGCTACA+TGG | - | chr4.3:34249183-34249202 | MS.gene50741:intron | 60.0% | |
| GTGGCTGCTTCAAACGCGAC+CGG | - | chr4.3:34251461-34251480 | MS.gene50741:intron | 60.0% | |
| TGGCTGCTTCAAACGCGACC+GGG | - | chr4.3:34251462-34251481 | MS.gene50741:intron | 60.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr4.3 | gene | 34246825 | 34251796 | 34246825 | ID=MS.gene50741 |
| chr4.3 | mRNA | 34246825 | 34251796 | 34246825 | ID=MS.gene50741.t1;Parent=MS.gene50741 |
| chr4.3 | exon | 34251493 | 34251796 | 34251493 | ID=MS.gene50741.t1.exon1;Parent=MS.gene50741.t1 |
| chr4.3 | CDS | 34251493 | 34251796 | 34251493 | ID=cds.MS.gene50741.t1;Parent=MS.gene50741.t1 |
| chr4.3 | exon | 34250361 | 34250701 | 34250361 | ID=MS.gene50741.t1.exon2;Parent=MS.gene50741.t1 |
| chr4.3 | CDS | 34250361 | 34250701 | 34250361 | ID=cds.MS.gene50741.t1;Parent=MS.gene50741.t1 |
| chr4.3 | exon | 34250103 | 34250255 | 34250103 | ID=MS.gene50741.t1.exon3;Parent=MS.gene50741.t1 |
| chr4.3 | CDS | 34250103 | 34250255 | 34250103 | ID=cds.MS.gene50741.t1;Parent=MS.gene50741.t1 |
| chr4.3 | exon | 34249710 | 34249802 | 34249710 | ID=MS.gene50741.t1.exon4;Parent=MS.gene50741.t1 |
| chr4.3 | CDS | 34249710 | 34249802 | 34249710 | ID=cds.MS.gene50741.t1;Parent=MS.gene50741.t1 |
| chr4.3 | exon | 34249371 | 34249429 | 34249371 | ID=MS.gene50741.t1.exon5;Parent=MS.gene50741.t1 |
| chr4.3 | CDS | 34249371 | 34249429 | 34249371 | ID=cds.MS.gene50741.t1;Parent=MS.gene50741.t1 |
| chr4.3 | exon | 34248914 | 34249007 | 34248914 | ID=MS.gene50741.t1.exon6;Parent=MS.gene50741.t1 |
| chr4.3 | CDS | 34248914 | 34249007 | 34248914 | ID=cds.MS.gene50741.t1;Parent=MS.gene50741.t1 |
| chr4.3 | exon | 34247993 | 34248144 | 34247993 | ID=MS.gene50741.t1.exon7;Parent=MS.gene50741.t1 |
| chr4.3 | CDS | 34247993 | 34248144 | 34247993 | ID=cds.MS.gene50741.t1;Parent=MS.gene50741.t1 |
| chr4.3 | exon | 34246825 | 34247371 | 34246825 | ID=MS.gene50741.t1.exon8;Parent=MS.gene50741.t1 |
| chr4.3 | CDS | 34246825 | 34247371 | 34246825 | ID=cds.MS.gene50741.t1;Parent=MS.gene50741.t1 |
| Gene Sequence |
| Protein sequence |
