Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene80354.t1 | XP_013451828.1 | 99.1 | 339 | 3 | 0 | 1 | 339 | 1 | 339 | 6.40E-197 | 696.4 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene80354.t1 | P46276 | 87.5 | 337 | 42 | 0 | 1 | 337 | 1 | 337 | 1.2e-178 | 627.1 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene80354.t1 | G8A0S6 | 99.1 | 339 | 3 | 0 | 1 | 339 | 1 | 339 | 4.6e-197 | 696.4 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|---|---|
| MS.gene80354.t1 | TF | C3H |
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| MS.gene049260 | MS.gene80354 | 0.830145 | 3.46E-55 | -1.69E-46 |
| MS.gene049346 | MS.gene80354 | 0.801396 | 9.18E-49 | -1.69E-46 |
| MS.gene049351 | MS.gene80354 | 0.824214 | 9.11E-54 | -1.69E-46 |
| MS.gene049356 | MS.gene80354 | 0.83234 | 1.00E-55 | -1.69E-46 |
| MS.gene049389 | MS.gene80354 | 0.851771 | 7.14E-61 | -1.69E-46 |
| MS.gene049491 | MS.gene80354 | 0.833708 | 4.57E-56 | -1.69E-46 |
| MS.gene049661 | MS.gene80354 | 0.81163 | 6.36E-51 | -1.69E-46 |
| MS.gene049662 | MS.gene80354 | 0.808776 | 2.62E-50 | -1.69E-46 |
| MS.gene049758 | MS.gene80354 | 0.88234 | 1.13E-70 | -1.69E-46 |
| MS.gene049910 | MS.gene80354 | 0.836508 | 8.98E-57 | -1.69E-46 |
| MS.gene050076 | MS.gene80354 | 0.851889 | 6.61E-61 | -1.69E-46 |
| MS.gene050099 | MS.gene80354 | 0.810099 | 1.36E-50 | -1.69E-46 |
| MS.gene050128 | MS.gene80354 | 0.851646 | 7.75E-61 | -1.69E-46 |
| MS.gene050301 | MS.gene80354 | 0.894804 | 1.75E-75 | -1.69E-46 |
| MS.gene050397 | MS.gene80354 | 0.816061 | 6.72E-52 | -1.69E-46 |
| MS.gene050432 | MS.gene80354 | 0.840534 | 8.21E-58 | -1.69E-46 |
| MS.gene050464 | MS.gene80354 | 0.828884 | 7.01E-55 | -1.69E-46 |
| MS.gene050529 | MS.gene80354 | 0.830961 | 2.19E-55 | -1.69E-46 |
| MS.gene05053 | MS.gene80354 | 0.824851 | 6.45E-54 | -1.69E-46 |
| MS.gene050670 | MS.gene80354 | 0.837827 | 4.13E-57 | -1.69E-46 |
| MS.gene050767 | MS.gene80354 | 0.808255 | 3.39E-50 | -1.69E-46 |
| MS.gene050770 | MS.gene80354 | 0.81188 | 5.61E-51 | -1.69E-46 |
| MS.gene05101 | MS.gene80354 | 0.843117 | 1.71E-58 | -1.69E-46 |
| MS.gene05105 | MS.gene80354 | 0.820507 | 6.61E-53 | -1.69E-46 |
| MS.gene05119 | MS.gene80354 | -0.818571 | 1.83E-52 | -1.69E-46 |
| MS.gene051360 | MS.gene80354 | 0.808182 | 3.51E-50 | -1.69E-46 |
| MS.gene051471 | MS.gene80354 | 0.855794 | 4.97E-62 | -1.69E-46 |
| MS.gene051582 | MS.gene80354 | 0.817008 | 4.12E-52 | -1.69E-46 |
| MS.gene051663 | MS.gene80354 | 0.801379 | 9.26E-49 | -1.69E-46 |
| MS.gene051860 | MS.gene80354 | 0.828378 | 9.29E-55 | -1.69E-46 |
| MS.gene051983 | MS.gene80354 | 0.813121 | 3.01E-51 | -1.69E-46 |
| MS.gene052077 | MS.gene80354 | 0.827564 | 1.46E-54 | -1.69E-46 |
| MS.gene052078 | MS.gene80354 | 0.873278 | 1.66E-67 | -1.69E-46 |
| MS.gene052178 | MS.gene80354 | 0.855946 | 4.48E-62 | -1.69E-46 |
| MS.gene052188 | MS.gene80354 | 0.878269 | 3.22E-69 | -1.69E-46 |
| MS.gene052207 | MS.gene80354 | 0.825015 | 5.90E-54 | -1.69E-46 |
| MS.gene052253 | MS.gene80354 | 0.824526 | 7.69E-54 | -1.69E-46 |
| MS.gene052290 | MS.gene80354 | 0.82055 | 6.47E-53 | -1.69E-46 |
| MS.gene052310 | MS.gene80354 | 0.86151 | 9.75E-64 | -1.69E-46 |
| MS.gene052322 | MS.gene80354 | 0.805273 | 1.45E-49 | -1.69E-46 |
| MS.gene052326 | MS.gene80354 | 0.825094 | 5.65E-54 | -1.69E-46 |
| MS.gene052340 | MS.gene80354 | 0.879095 | 1.65E-69 | -1.69E-46 |
| MS.gene052484 | MS.gene80354 | 0.80279 | 4.75E-49 | -1.69E-46 |
| MS.gene052485 | MS.gene80354 | 0.828692 | 7.81E-55 | -1.69E-46 |
| MS.gene052767 | MS.gene80354 | 0.809094 | 2.24E-50 | -1.69E-46 |
| MS.gene053073 | MS.gene80354 | 0.847743 | 9.53E-60 | -1.69E-46 |
| MS.gene053103 | MS.gene80354 | 0.8665 | 2.72E-65 | -1.69E-46 |
| MS.gene05316 | MS.gene80354 | 0.828116 | 1.08E-54 | -1.69E-46 |
| MS.gene053209 | MS.gene80354 | 0.888958 | 3.72E-73 | -1.69E-46 |
| MS.gene053322 | MS.gene80354 | 0.803143 | 4.01E-49 | -1.69E-46 |
| MS.gene053557 | MS.gene80354 | 0.849554 | 3.00E-60 | -1.69E-46 |
| MS.gene053559 | MS.gene80354 | 0.807756 | 4.33E-50 | -1.69E-46 |
| MS.gene053836 | MS.gene80354 | 0.883091 | 6.01E-71 | -1.69E-46 |
| MS.gene053928 | MS.gene80354 | 0.829137 | 6.09E-55 | -1.69E-46 |
| MS.gene054123 | MS.gene80354 | 0.854534 | 1.15E-61 | -1.69E-46 |
| MS.gene054327 | MS.gene80354 | 0.80027 | 1.56E-48 | -1.69E-46 |
| MS.gene054376 | MS.gene80354 | 0.814215 | 1.73E-51 | -1.69E-46 |
| MS.gene054473 | MS.gene80354 | 0.837217 | 5.92E-57 | -1.69E-46 |
| MS.gene05455 | MS.gene80354 | 0.815102 | 1.10E-51 | -1.69E-46 |
| MS.gene054930 | MS.gene80354 | 0.846624 | 1.93E-59 | -1.69E-46 |
| MS.gene055116 | MS.gene80354 | 0.844328 | 8.09E-59 | -1.69E-46 |
| MS.gene055254 | MS.gene80354 | 0.821123 | 4.77E-53 | -1.69E-46 |
| MS.gene055277 | MS.gene80354 | 0.861449 | 1.02E-63 | -1.69E-46 |
| MS.gene055390 | MS.gene80354 | 0.83623 | 1.06E-56 | -1.69E-46 |
| MS.gene055412 | MS.gene80354 | 0.817092 | 3.94E-52 | -1.69E-46 |
| MS.gene055422 | MS.gene80354 | 0.891253 | 4.70E-74 | -1.69E-46 |
| MS.gene055428 | MS.gene80354 | 0.874482 | 6.52E-68 | -1.69E-46 |
| MS.gene05553 | MS.gene80354 | 0.824332 | 8.55E-54 | -1.69E-46 |
| MS.gene055604 | MS.gene80354 | 0.823287 | 1.50E-53 | -1.69E-46 |
| MS.gene055666 | MS.gene80354 | 0.802681 | 5.00E-49 | -1.69E-46 |
| MS.gene055712 | MS.gene80354 | 0.840782 | 7.07E-58 | -1.69E-46 |
| MS.gene055859 | MS.gene80354 | 0.804576 | 2.02E-49 | -1.69E-46 |
| MS.gene05592 | MS.gene80354 | 0.801314 | 9.55E-49 | -1.69E-46 |
| MS.gene056191 | MS.gene80354 | 0.806545 | 7.81E-50 | -1.69E-46 |
| MS.gene056314 | MS.gene80354 | 0.827759 | 1.31E-54 | -1.69E-46 |
| MS.gene056407 | MS.gene80354 | 0.866678 | 2.39E-65 | -1.69E-46 |
| MS.gene056410 | MS.gene80354 | 0.821193 | 4.60E-53 | -1.69E-46 |
| MS.gene056609 | MS.gene80354 | 0.83719 | 6.02E-57 | -1.69E-46 |
| MS.gene056612 | MS.gene80354 | 0.848288 | 6.74E-60 | -1.69E-46 |
| MS.gene056659 | MS.gene80354 | 0.83745 | 5.16E-57 | -1.69E-46 |
| MS.gene056719 | MS.gene80354 | 0.837875 | 4.02E-57 | -1.69E-46 |
| MS.gene056979 | MS.gene80354 | 0.817899 | 2.60E-52 | -1.69E-46 |
| MS.gene05702 | MS.gene80354 | 0.865928 | 4.14E-65 | -1.69E-46 |
| MS.gene057121 | MS.gene80354 | 0.805984 | 1.03E-49 | -1.69E-46 |
| MS.gene057123 | MS.gene80354 | 0.817914 | 2.58E-52 | -1.69E-46 |
| MS.gene057124 | MS.gene80354 | 0.805172 | 1.52E-49 | -1.69E-46 |
| MS.gene057245 | MS.gene80354 | 0.817763 | 2.79E-52 | -1.69E-46 |
| MS.gene057295 | MS.gene80354 | 0.810765 | 9.80E-51 | -1.69E-46 |
| MS.gene05733 | MS.gene80354 | 0.820041 | 8.46E-53 | -1.69E-46 |
| MS.gene05735 | MS.gene80354 | 0.809505 | 1.83E-50 | -1.69E-46 |
| MS.gene057439 | MS.gene80354 | 0.849145 | 3.90E-60 | -1.69E-46 |
| MS.gene057448 | MS.gene80354 | 0.850615 | 1.51E-60 | -1.69E-46 |
| MS.gene057449 | MS.gene80354 | 0.827906 | 1.21E-54 | -1.69E-46 |
| MS.gene057450 | MS.gene80354 | 0.863447 | 2.47E-64 | -1.69E-46 |
| MS.gene057469 | MS.gene80354 | 0.818213 | 2.20E-52 | -1.69E-46 |
| MS.gene057749 | MS.gene80354 | 0.818131 | 2.30E-52 | -1.69E-46 |
| MS.gene057796 | MS.gene80354 | 0.812977 | 3.23E-51 | -1.69E-46 |
| MS.gene057823 | MS.gene80354 | 0.823252 | 1.53E-53 | -1.69E-46 |
| MS.gene058002 | MS.gene80354 | 0.852005 | 6.13E-61 | -1.69E-46 |
| MS.gene058082 | MS.gene80354 | 0.855583 | 5.72E-62 | -1.69E-46 |
| MS.gene05811 | MS.gene80354 | 0.857961 | 1.14E-62 | -1.69E-46 |
| MS.gene058142 | MS.gene80354 | 0.826479 | 2.65E-54 | -1.69E-46 |
| MS.gene058233 | MS.gene80354 | 0.801197 | 1.01E-48 | -1.69E-46 |
| MS.gene058276 | MS.gene80354 | 0.81406 | 1.87E-51 | -1.69E-46 |
| MS.gene058293 | MS.gene80354 | 0.869551 | 2.84E-66 | -1.69E-46 |
| MS.gene058365 | MS.gene80354 | 0.832835 | 7.54E-56 | -1.69E-46 |
| MS.gene058660 | MS.gene80354 | 0.851936 | 6.41E-61 | -1.69E-46 |
| MS.gene058710 | MS.gene80354 | 0.801258 | 9.80E-49 | -1.69E-46 |
| MS.gene058787 | MS.gene80354 | 0.821285 | 4.38E-53 | -1.69E-46 |
| MS.gene058845 | MS.gene80354 | 0.816186 | 6.30E-52 | -1.69E-46 |
| MS.gene05886 | MS.gene80354 | 0.836115 | 1.13E-56 | -1.69E-46 |
| MS.gene058928 | MS.gene80354 | 0.832125 | 1.13E-55 | -1.69E-46 |
| MS.gene05907 | MS.gene80354 | 0.86141 | 1.05E-63 | -1.69E-46 |
| MS.gene059228 | MS.gene80354 | 0.803236 | 3.84E-49 | -1.69E-46 |
| MS.gene059285 | MS.gene80354 | 0.842869 | 1.99E-58 | -1.69E-46 |
| MS.gene059326 | MS.gene80354 | 0.810947 | 8.94E-51 | -1.69E-46 |
| MS.gene059342 | MS.gene80354 | 0.808068 | 3.71E-50 | -1.69E-46 |
| MS.gene059366 | MS.gene80354 | 0.835513 | 1.61E-56 | -1.69E-46 |
| MS.gene059518 | MS.gene80354 | 0.857459 | 1.61E-62 | -1.69E-46 |
| MS.gene059597 | MS.gene80354 | 0.897825 | 9.65E-77 | -1.69E-46 |
| MS.gene05959 | MS.gene80354 | 0.837957 | 3.83E-57 | -1.69E-46 |
| MS.gene059676 | MS.gene80354 | 0.871775 | 5.28E-67 | -1.69E-46 |
| MS.gene059688 | MS.gene80354 | 0.878288 | 3.17E-69 | -1.69E-46 |
| MS.gene059692 | MS.gene80354 | 0.895753 | 7.10E-76 | -1.69E-46 |
| MS.gene059695 | MS.gene80354 | 0.891859 | 2.70E-74 | -1.69E-46 |
| MS.gene059708 | MS.gene80354 | 0.81417 | 1.77E-51 | -1.69E-46 |
| MS.gene059711 | MS.gene80354 | 0.843047 | 1.78E-58 | -1.69E-46 |
| MS.gene05984 | MS.gene80354 | 0.860404 | 2.12E-63 | -1.69E-46 |
| MS.gene059894 | MS.gene80354 | 0.899651 | 1.60E-77 | -1.69E-46 |
| MS.gene059899 | MS.gene80354 | 0.829073 | 6.31E-55 | -1.69E-46 |
| MS.gene059960 | MS.gene80354 | 0.804604 | 1.99E-49 | -1.69E-46 |
| MS.gene059974 | MS.gene80354 | 0.838662 | 2.52E-57 | -1.69E-46 |
| MS.gene060005 | MS.gene80354 | 0.815756 | 7.86E-52 | -1.69E-46 |
| MS.gene06037 | MS.gene80354 | 0.858485 | 7.97E-63 | -1.69E-46 |
| MS.gene060403 | MS.gene80354 | 0.811728 | 6.06E-51 | -1.69E-46 |
| MS.gene060407 | MS.gene80354 | 0.825903 | 3.64E-54 | -1.69E-46 |
| MS.gene060495 | MS.gene80354 | 0.834053 | 3.74E-56 | -1.69E-46 |
| MS.gene060496 | MS.gene80354 | 0.816124 | 6.50E-52 | -1.69E-46 |
| MS.gene060818 | MS.gene80354 | 0.804579 | 2.02E-49 | -1.69E-46 |
| MS.gene060837 | MS.gene80354 | 0.804186 | 2.44E-49 | -1.69E-46 |
| MS.gene061049 | MS.gene80354 | 0.891938 | 2.51E-74 | -1.69E-46 |
| MS.gene061051 | MS.gene80354 | -0.861477 | 9.98E-64 | -1.69E-46 |
| MS.gene061112 | MS.gene80354 | 0.812098 | 5.03E-51 | -1.69E-46 |
| MS.gene061154 | MS.gene80354 | 0.801032 | 1.09E-48 | -1.69E-46 |
| MS.gene061159 | MS.gene80354 | 0.825892 | 3.66E-54 | -1.69E-46 |
| MS.gene061265 | MS.gene80354 | 0.810399 | 1.18E-50 | -1.69E-46 |
PPI:
| Gene1 | Gene2 | Type |
|---|---|---|
| MS.gene80354 | MS.gene068024 | PPI |
| MS.gene80354 | MS.gene028481 | PPI |
| MS.gene80354 | MS.gene053579 | PPI |
| MS.gene80354 | MS.gene90221 | PPI |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene80354.t1 | MTR_6g035305 | 99.115 | 339 | 3 | 0 | 1 | 339 | 1 | 339 | 0.0 | 697 |
| MS.gene80354.t1 | MTR_2g008030 | 84.179 | 335 | 53 | 0 | 1 | 335 | 1 | 335 | 0.0 | 597 |
| MS.gene80354.t1 | MTR_7g066120 | 50.000 | 342 | 153 | 2 | 11 | 335 | 71 | 411 | 7.80e-114 | 336 |
| MS.gene80354.t1 | MTR_0776s0010 | 41.337 | 329 | 185 | 5 | 7 | 328 | 284 | 611 | 1.02e-83 | 276 |
| MS.gene80354.t1 | MTR_4g093620 | 40.836 | 311 | 161 | 6 | 32 | 332 | 87 | 384 | 6.71e-73 | 231 |
| MS.gene80354.t1 | MTR_3g070100 | 28.253 | 269 | 165 | 8 | 67 | 327 | 116 | 364 | 7.58e-19 | 87.0 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene80354.t1 | AT1G43670 | 85.251 | 339 | 50 | 0 | 1 | 339 | 1 | 339 | 0.0 | 614 |
| MS.gene80354.t1 | AT3G54050 | 50.000 | 342 | 151 | 3 | 11 | 335 | 79 | 417 | 3.06e-114 | 338 |
| MS.gene80354.t1 | AT3G54050 | 50.000 | 342 | 151 | 3 | 11 | 335 | 79 | 417 | 3.06e-114 | 338 |
| MS.gene80354.t1 | AT5G64380 | 41.158 | 311 | 164 | 7 | 32 | 332 | 89 | 390 | 3.91e-74 | 234 |
| MS.gene80354.t1 | AT3G55800 | 29.304 | 273 | 157 | 8 | 67 | 327 | 123 | 371 | 1.30e-19 | 89.4 |
Find 80 sgRNAs with CRISPR-Local
Find 338 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| GAATAAATCTTGCCTTTCTT+TGG | 0.224320 | 6.3:-27581723 | None:intergenic |
| ATCATAGCTACCAAGAAATA+TGG | 0.228525 | 6.3:-27583814 | None:intergenic |
| TTGCTTAATAACATTGTTCT+TGG | 0.232374 | 6.3:+27577831 | MS.gene80354:CDS |
| ACCACTGGAAGTGGTGTTAA+TGG | 0.234751 | 6.3:+27580923 | MS.gene80354:CDS |
| GCAAAGTCTCTTAGATATAT+TGG | 0.276844 | 6.3:+27581919 | MS.gene80354:CDS |
| CCTAACTCACCCTGACATTA+AGG | 0.279021 | 6.3:+27580979 | MS.gene80354:CDS |
| GAAAGATCTCCCATATTTCT+TGG | 0.282491 | 6.3:+27583804 | MS.gene80354:CDS |
| GCAAAGCTCATTGGACTTGC+AGG | 0.289654 | 6.3:+27579182 | MS.gene80354:CDS |
| CTTCCCAATGTCCTTCTTGA+TGG | 0.290934 | 6.3:+27583057 | MS.gene80354:CDS |
| GTGAAATCTCCACGTGATTC+AGG | 0.296233 | 6.3:-27577804 | None:intergenic |
| ATGCATTACCCTTTCCTTGC+CGG | 0.313636 | 6.3:-27583104 | None:intergenic |
| AATAAATCTTGCCTTTCTTT+GGG | 0.337209 | 6.3:-27581722 | None:intergenic |
| ATTCAACACAAAACGTGTTA+TGG | 0.348871 | 6.3:-27577766 | None:intergenic |
| CCTTAATGTCAGGGTGAGTT+AGG | 0.353076 | 6.3:-27580979 | None:intergenic |
| GTTCATCGTACATTGCTATA+TGG | 0.377460 | 6.3:+27582868 | MS.gene80354:CDS |
| TTCACTCTCGACCCTTCTCT+TGG | 0.387036 | 6.3:+27580947 | MS.gene80354:CDS |
| GGTAGGACCATCCCAGTTCT+TGG | 0.411498 | 6.3:-27581763 | None:intergenic |
| ATGAAGGGAATGCCAAGAAC+TGG | 0.427423 | 6.3:+27581751 | MS.gene80354:CDS |
| TGCAGGAGAGACCAATGTTC+AGG | 0.427688 | 6.3:+27579199 | MS.gene80354:CDS |
| ATGTTGGAAGAGCCGTCTAA+TGG | 0.435353 | 6.3:-27580339 | None:intergenic |
| GCAGAATATACCTTAATGTC+AGG | 0.435699 | 6.3:-27580989 | None:intergenic |
| TTTGTCAGCAGGGTACAAAA+AGG | 0.440471 | 6.3:-27582896 | None:intergenic |
| ATCGATTGTGGTGTTTCCAT+TGG | 0.440634 | 6.3:+27580360 | MS.gene80354:CDS |
| GCTGGTCTTGCAAAGCTCAT+TGG | 0.453630 | 6.3:+27579173 | MS.gene80354:CDS |
| AATGTCCTTCTTGATGGAAC+AGG | 0.459315 | 6.3:+27583063 | MS.gene80354:CDS |
| AAGATTTATTCAGTGAATGA+AGG | 0.460520 | 6.3:+27581735 | MS.gene80354:CDS |
| AGCCTTGCAGAACACCTCAT+TGG | 0.474174 | 6.3:-27579811 | None:intergenic |
| GGCTTTCACCGGCAAGGAAA+GGG | 0.474657 | 6.3:+27583096 | MS.gene80354:CDS |
| CATCATCTATGACTGGTTCA+TGG | 0.489912 | 6.3:-27580712 | None:intergenic |
| TCATAGCTACCAAGAAATAT+GGG | 0.491600 | 6.3:-27583813 | None:intergenic |
| TTCCAATGAGGTGTTCTGCA+AGG | 0.494248 | 6.3:+27579809 | MS.gene80354:CDS |
| AACAATGTTATTAAGCAAGA+TGG | 0.499875 | 6.3:-27577826 | None:intergenic |
| GTTCCATCAAGAAGGACATT+GGG | 0.503823 | 6.3:-27583060 | None:intergenic |
| GATGGAACAGGCAGGAGGAC+AGG | 0.504743 | 6.3:+27583075 | MS.gene80354:CDS |
| GCTGCTAACATGTTCTTCCC+TGG | 0.509552 | 6.3:-27580743 | None:intergenic |
| AGGCTTTCACCGGCAAGGAA+AGG | 0.509795 | 6.3:+27583095 | MS.gene80354:CDS |
| ATATATCTAAGAGACTTTGC+TGG | 0.512421 | 6.3:-27581916 | None:intergenic |
| AGGATAAACTCGCCAAGAGA+AGG | 0.516852 | 6.3:-27580959 | None:intergenic |
| AACAACTTTCCACGCTGCTT+AGG | 0.518664 | 6.3:-27579983 | None:intergenic |
| GCAGCTGGTTATTGCATGTA+CGG | 0.523788 | 6.3:+27580761 | MS.gene80354:CDS |
| AAATGCAAGTTTCCAACAGA+TGG | 0.529309 | 6.3:+27581889 | MS.gene80354:CDS |
| TAGATGATGTTCTGCAACCA+GGG | 0.531413 | 6.3:+27580726 | MS.gene80354:CDS |
| TCTTTGCAGATCCCAAAGAA+AGG | 0.537179 | 6.3:+27581711 | MS.gene80354:intron |
| TGTTCCATCAAGAAGGACAT+TGG | 0.542151 | 6.3:-27583061 | None:intergenic |
| GGGAACACTTACCTGAACAT+TGG | 0.543127 | 6.3:-27579210 | None:intergenic |
| AGATGAGGATGCAATATTCG+TGG | 0.547860 | 6.3:+27579958 | MS.gene80354:CDS |
| GCAGGAGGACAGGCTTTCAC+CGG | 0.548518 | 6.3:+27583085 | MS.gene80354:CDS |
| TTTGCTGGTGAACCATCTGT+TGG | 0.549730 | 6.3:-27581901 | None:intergenic |
| TCCTGCCTGTTCCATCAAGA+AGG | 0.554789 | 6.3:-27583068 | None:intergenic |
| ATAGATGATGTTCTGCAACC+AGG | 0.557336 | 6.3:+27580725 | MS.gene80354:CDS |
| GGAAACACCACAATCGATGT+TGG | 0.558592 | 6.3:-27580355 | None:intergenic |
| GGGAAGAACATGTTAGCAGC+TGG | 0.562041 | 6.3:+27580746 | MS.gene80354:CDS |
| TTGCAGTTTGTGATAACCAC+TGG | 0.562279 | 6.3:+27580908 | MS.gene80354:intron |
| TAGGGATCATACAGTTCCAA+TGG | 0.562520 | 6.3:-27580376 | None:intergenic |
| CAAAGCTCTTTATGCTGCAG+AGG | 0.565129 | 6.3:+27583851 | MS.gene80354:CDS |
| TGCAGAACATCATCTATGAC+TGG | 0.575640 | 6.3:-27580719 | None:intergenic |
| CTTGGTTTCTGAAGAAGATG+AGG | 0.575814 | 6.3:+27579943 | MS.gene80354:CDS |
| AGATTTATTCAGTGAATGAA+GGG | 0.580033 | 6.3:+27581736 | MS.gene80354:CDS |
| GGCTCTTCCAACATCGATTG+TGG | 0.580554 | 6.3:+27580348 | MS.gene80354:CDS |
| TGCAAGGCTTTGATAAGCAG+TGG | 0.582350 | 6.3:+27579825 | MS.gene80354:CDS |
| ACCATTAACACCACTTCCAG+TGG | 0.586134 | 6.3:-27580924 | None:intergenic |
| GGATAAACTCGCCAAGAGAA+GGG | 0.588099 | 6.3:-27580958 | None:intergenic |
| TCCTTCTTGATGGAACAGGC+AGG | 0.593282 | 6.3:+27583067 | MS.gene80354:CDS |
| CATGTACGGAAGCTCTTGCA+CGG | 0.593772 | 6.3:+27580775 | MS.gene80354:CDS |
| GCTTGATGTTCTTTCCAATG+AGG | 0.597378 | 6.3:+27579797 | MS.gene80354:CDS |
| TTTGTGATAACCACTGGAAG+TGG | 0.598951 | 6.3:+27580914 | MS.gene80354:CDS |
| CAGAATATACCTTAATGTCA+GGG | 0.600106 | 6.3:-27580988 | None:intergenic |
| TGTTTGTTCTGCTGTTAACA+AGG | 0.601443 | 6.3:+27577863 | MS.gene80354:CDS |
| AGAGTCCAAATGGAAAACTT+CGG | 0.610193 | 6.3:+27582920 | MS.gene80354:CDS |
| GGGAATGCCAAGAACTGGGA+TGG | 0.611887 | 6.3:+27581756 | MS.gene80354:CDS |
| AGTCTCTTAGATATATTGGA+AGG | 0.616044 | 6.3:+27581923 | MS.gene80354:CDS |
| ATTCATACGTACGCAGCGGT+AGG | 0.620838 | 6.3:-27581780 | None:intergenic |
| AGGACAGGCTTTCACCGGCA+AGG | 0.624102 | 6.3:+27583090 | MS.gene80354:CDS |
| TGAAGGGAATGCCAAGAACT+GGG | 0.636555 | 6.3:+27581752 | MS.gene80354:CDS |
| TACGATGTGCATCTGCGCTG+TGG | 0.637166 | 6.3:-27577731 | None:intergenic |
| CATCGTACATTGCTATATGG+AGG | 0.654004 | 6.3:+27582871 | MS.gene80354:CDS |
| TGGTAGCTATGATGATATCG+AGG | 0.676941 | 6.3:+27583824 | MS.gene80354:CDS |
| TTCTTGATGGAACAGGCAGG+AGG | 0.688021 | 6.3:+27583070 | MS.gene80354:CDS |
| TCTAAGCATCCTGAATCACG+TGG | 0.704682 | 6.3:+27577795 | MS.gene80354:CDS |
| TTCGTGGATCCTAAGCAGCG+TGG | 0.711587 | 6.3:+27579974 | MS.gene80354:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !!! | AAAATAACTTAATTTTTTGT+TGG | + | chr6.3:27579295-27579314 | MS.gene80354:intron | 10.0% |
| !!! | ATTTATTTTTCTTTATTGTT+TGG | + | chr6.3:27579750-27579769 | MS.gene80354:intron | 10.0% |
| !!! | TCTAATTATTTTAATTTTGA+TGG | + | chr6.3:27582991-27583010 | MS.gene80354:intron | 10.0% |
| !!! | TTGAAAAGAATTTATTTTTA+CGG | + | chr6.3:27583402-27583421 | MS.gene80354:intron | 10.0% |
| !!! | TTTTATTTTTTTTACGATTT+AGG | + | chr6.3:27580298-27580317 | MS.gene80354:intron | 10.0% |
| !! | ACTTATTGTAATATTCAAAT+AGG | + | chr6.3:27581635-27581654 | MS.gene80354:intron | 15.0% |
| !! | CTTATTGTAATATTCAAATA+GGG | + | chr6.3:27581636-27581655 | MS.gene80354:intron | 15.0% |
| !! | TAAGATTGAAAATTTAACAA+TGG | + | chr6.3:27581832-27581851 | MS.gene80354:intron | 15.0% |
| !! | TGATGATATATTAAGTTATA+AGG | + | chr6.3:27579133-27579152 | MS.gene80354:intron | 15.0% |
| !!! | AAAATATAACTTTTTCATGA+TGG | + | chr6.3:27579471-27579490 | MS.gene80354:intron | 15.0% |
| !!! | AAAGTATATATTTTTCGAAA+AGG | - | chr6.3:27583151-27583170 | None:intergenic | 15.0% |
| !!! | AAATCACTTTTGATTAATTA+TGG | + | chr6.3:27579519-27579538 | MS.gene80354:intron | 15.0% |
| !!! | AACAATTTCTCATTTTAAAT+AGG | + | chr6.3:27583223-27583242 | MS.gene80354:intron | 15.0% |
| !!! | AAGCTAATATAATTTGTATT+TGG | + | chr6.3:27582968-27582987 | MS.gene80354:intron | 15.0% |
| !!! | TTTATTTTTTTATCCAAACA+AGG | - | chr6.3:27582006-27582025 | None:intergenic | 15.0% |
| !! | AAGAGATTTCAATAAAAGTA+TGG | + | chr6.3:27583472-27583491 | MS.gene80354:intron | 20.0% |
| !! | AATAAGTTTGCATTATAGAT+AGG | - | chr6.3:27581622-27581641 | None:intergenic | 20.0% |
| !! | ACATCATTTATGTTAATTGT+TGG | + | chr6.3:27581678-27581697 | MS.gene80354:intron | 20.0% |
| !! | AGAAGGAAAAAAAAATATGA+TGG | - | chr6.3:27583605-27583624 | None:intergenic | 20.0% |
| !! | ATATTGAGATGAAATCAATT+TGG | + | chr6.3:27579677-27579696 | MS.gene80354:intron | 20.0% |
| !! | CCAAATACATATTAACAATT+TGG | + | chr6.3:27579716-27579735 | MS.gene80354:intron | 20.0% |
| !! | CCAAATTGTTAATATGTATT+TGG | - | chr6.3:27579719-27579738 | None:intergenic | 20.0% |
| !! | CTTATTAGACATTTATAAGA+AGG | - | chr6.3:27583622-27583641 | None:intergenic | 20.0% |
| !! | CTTCTTATAAATGTCTAATA+AGG | + | chr6.3:27583620-27583639 | MS.gene80354:intron | 20.0% |
| !! | TCTTGTGAATAAAAAAAATG+CGG | - | chr6.3:27582620-27582639 | None:intergenic | 20.0% |
| !! | TTAATTACTCCATTACAATT+CGG | + | chr6.3:27580874-27580893 | MS.gene80354:intron | 20.0% |
| !! | TTCAATGTAACTATATATGT+TGG | - | chr6.3:27578358-27578377 | None:intergenic | 20.0% |
| !!! | AAAAACAACTTATTTCTTAC+AGG | - | chr6.3:27582198-27582217 | None:intergenic | 20.0% |
| !!! | ACATACTTATAAGTTTGTTT+GGG | - | chr6.3:27579234-27579253 | None:intergenic | 20.0% |
| !!! | ATTAAGTTGTTTATCCAAAT+AGG | - | chr6.3:27578720-27578739 | None:intergenic | 20.0% |
| !!! | GAAGTTTAACTTTGATATTT+TGG | + | chr6.3:27580248-27580267 | MS.gene80354:intron | 20.0% |
| !!! | TAAAACAAAACAATTGCTTT+TGG | - | chr6.3:27583319-27583338 | None:intergenic | 20.0% |
| !!! | TATTTGTTTTCATTTTCCAT+AGG | + | chr6.3:27577908-27577927 | MS.gene80354:intron | 20.0% |
| !!! | TGAAAGATAATTGATGATTT+TGG | - | chr6.3:27582335-27582354 | None:intergenic | 20.0% |
| !!! | TGTGATTTTCTCAAATTATT+AGG | + | chr6.3:27578120-27578139 | MS.gene80354:intron | 20.0% |
| !!! | TTAAGTTGTTTATCCAAATA+GGG | - | chr6.3:27578719-27578738 | None:intergenic | 20.0% |
| !!! | TTATATTAGCTTAAACATTG+AGG | - | chr6.3:27582960-27582979 | None:intergenic | 20.0% |
| !!! | TTTTTCTTATTACAGTTATG+TGG | + | chr6.3:27581864-27581883 | MS.gene80354:intron | 20.0% |
| ! | AAACATAGAATTATGATCAG+TGG | - | chr6.3:27577985-27578004 | None:intergenic | 25.0% |
| ! | AACAATGTTATTAAGCAAGA+TGG | - | chr6.3:27577829-27577848 | None:intergenic | 25.0% |
| ! | AAGATTTATTCAGTGAATGA+AGG | + | chr6.3:27581735-27581754 | MS.gene80354:CDS | 25.0% |
| ! | AATAAATCTTGCCTTTCTTT+GGG | - | chr6.3:27581725-27581744 | None:intergenic | 25.0% |
| ! | AATATGAAAAACAACACAGT+AGG | - | chr6.3:27580405-27580424 | None:intergenic | 25.0% |
| ! | ACCAAACTAGGATAAAAATA+AGG | - | chr6.3:27581549-27581568 | None:intergenic | 25.0% |
| ! | AGATTTATTCAGTGAATGAA+GGG | + | chr6.3:27581736-27581755 | MS.gene80354:CDS | 25.0% |
| ! | ATAATAAGAGTAGAGATACA+TGG | + | chr6.3:27583449-27583468 | MS.gene80354:intron | 25.0% |
| ! | ATATGAAAAACAACACAGTA+GGG | - | chr6.3:27580404-27580423 | None:intergenic | 25.0% |
| ! | CTAGAGTCTATAATTATTCA+TGG | + | chr6.3:27582281-27582300 | MS.gene80354:intron | 25.0% |
| ! | CTGTGATTGATATACAATTA+TGG | + | chr6.3:27578453-27578472 | MS.gene80354:intron | 25.0% |
| ! | GAAAACAACTTATAGCTTAT+TGG | - | chr6.3:27582147-27582166 | None:intergenic | 25.0% |
| ! | GGATTTCACTAAAAGTTAAT+CGG | - | chr6.3:27582587-27582606 | None:intergenic | 25.0% |
| ! | TAAAAGTTAATCGGTAAAGT+CGG | - | chr6.3:27582578-27582597 | None:intergenic | 25.0% |
| ! | TAATTACTCCATTACAATTC+GGG | + | chr6.3:27580875-27580894 | MS.gene80354:intron | 25.0% |
| ! | TCTATTTGCTTAAAACTTCA+TGG | + | chr6.3:27581108-27581127 | MS.gene80354:intron | 25.0% |
| ! | TCTCAAATTATTAGGAGTTT+CGG | + | chr6.3:27578128-27578147 | MS.gene80354:intron | 25.0% |
| ! | TGAATAAAAAAAATGCGGTT+GGG | - | chr6.3:27582615-27582634 | None:intergenic | 25.0% |
| ! | TTCAGTGTAATTATATGTGA+CGG | - | chr6.3:27578097-27578116 | None:intergenic | 25.0% |
| ! | TTGCTTAATAACATTGTTCT+TGG | + | chr6.3:27577831-27577850 | MS.gene80354:CDS | 25.0% |
| !! | ACTTCTAAGGAATTCAAAAA+AGG | - | chr6.3:27583648-27583667 | None:intergenic | 25.0% |
| !! | CATACTTATAAGTTTGTTTG+GGG | - | chr6.3:27579233-27579252 | None:intergenic | 25.0% |
| !! | GACATACTTATAAGTTTGTT+TGG | - | chr6.3:27579235-27579254 | None:intergenic | 25.0% |
| !! | TAGATTTTTCTTTTTTCTGC+AGG | + | chr6.3:27583249-27583268 | MS.gene80354:intron | 25.0% |
| !! | TCTTTATTGTTTGGAATGAA+GGG | + | chr6.3:27579759-27579778 | MS.gene80354:intron | 25.0% |
| !! | TGTTTAATAGCTTTTGATGA+TGG | + | chr6.3:27579898-27579917 | MS.gene80354:intron | 25.0% |
| !! | TTCAACAAATATCGTTTTGT+TGG | - | chr6.3:27583387-27583406 | None:intergenic | 25.0% |
| !! | TTCACATATATTCTCTAAGA+AGG | + | chr6.3:27580037-27580056 | MS.gene80354:intron | 25.0% |
| !! | TTCTTTATTGTTTGGAATGA+AGG | + | chr6.3:27579758-27579777 | MS.gene80354:intron | 25.0% |
| !! | TTGAACATTTTGCAGATTTT+TGG | + | chr6.3:27580668-27580687 | MS.gene80354:intron | 25.0% |
| !! | TTTTTGTACATTAAACAGCA+TGG | + | chr6.3:27582837-27582856 | MS.gene80354:intron | 25.0% |
| !!! | AAAAAGGTTGATATGAAGTA+AGG | + | chr6.3:27578275-27578294 | MS.gene80354:intron | 25.0% |
| !!! | AAATATCGTTTTGTTGGATT+AGG | - | chr6.3:27583381-27583400 | None:intergenic | 25.0% |
| !!! | AATATCGTTTTGTTGGATTA+GGG | - | chr6.3:27583380-27583399 | None:intergenic | 25.0% |
| !!! | ACTTAATTTTTTGTTGGATG+TGG | + | chr6.3:27579301-27579320 | MS.gene80354:intron | 25.0% |
| !!! | ATCAAATTTGATTTAGCTCT+TGG | + | chr6.3:27579427-27579446 | MS.gene80354:intron | 25.0% |
| !!! | CATATCAACCTTTTTTAATC+AGG | - | chr6.3:27578270-27578289 | None:intergenic | 25.0% |
| !!! | CTTAATTTTTTGTTGGATGT+GGG | + | chr6.3:27579302-27579321 | MS.gene80354:intron | 25.0% |
| !!! | GTGTTGTTTTTCATATTTGA+AGG | + | chr6.3:27580408-27580427 | MS.gene80354:intron | 25.0% |
| !!! | TAAGGTTTTGTTATATGTGT+AGG | + | chr6.3:27579151-27579170 | MS.gene80354:intron | 25.0% |
| !!! | TATTTTTACAACCCTGTTAT+TGG | + | chr6.3:27582539-27582558 | MS.gene80354:intron | 25.0% |
| !!! | TTGGTCTGATTAGTTTAATA+CGG | + | chr6.3:27580267-27580286 | MS.gene80354:intron | 25.0% |
| AAATAAGGCAAATTCTACAG+TGG | - | chr6.3:27581534-27581553 | None:intergenic | 30.0% | |
| AAGTAGTAAAATCAGCATGT+TGG | - | chr6.3:27583682-27583701 | None:intergenic | 30.0% | |
| AAGTTGTTTATCCAACTGAT+TGG | - | chr6.3:27578864-27578883 | None:intergenic | 30.0% | |
| ACAAATACGAAAAAGAGTGA+AGG | - | chr6.3:27577895-27577914 | None:intergenic | 30.0% | |
| ACCAGTGTTTAAAAATCACT+CGG | + | chr6.3:27581214-27581233 | MS.gene80354:intron | 30.0% | |
| AGATATCTTAAGTAAGGTCT+CGG | - | chr6.3:27582650-27582669 | None:intergenic | 30.0% | |
| AGTCTCTTAGATATATTGGA+AGG | + | chr6.3:27581923-27581942 | MS.gene80354:CDS | 30.0% | |
| AGTTGTTTATCCAACTGATT+GGG | - | chr6.3:27578863-27578882 | None:intergenic | 30.0% | |
| ATACATACACTCTTCACTAA+TGG | - | chr6.3:27582450-27582469 | None:intergenic | 30.0% | |
| ATAGCTATTGCTATAAGCTT+TGG | - | chr6.3:27582091-27582110 | None:intergenic | 30.0% | |
| ATATATCTAAGAGACTTTGC+TGG | - | chr6.3:27581919-27581938 | None:intergenic | 30.0% | |
| ATCAGTGCTTCATTAAACAT+GGG | + | chr6.3:27578190-27578209 | MS.gene80354:intron | 30.0% | |
| ATCATAGCTACCAAGAAATA+TGG | - | chr6.3:27583817-27583836 | None:intergenic | 30.0% | |
| ATTCAACACAAAACGTGTTA+TGG | - | chr6.3:27577769-27577788 | None:intergenic | 30.0% | |
| CAGAATATACCTTAATGTCA+GGG | - | chr6.3:27580991-27581010 | None:intergenic | 30.0% | |
| CAGGAAAACAATAAACTCTT+TGG | - | chr6.3:27582179-27582198 | None:intergenic | 30.0% | |
| CGTCAGTTCAATAAAAAACA+AGG | - | chr6.3:27581377-27581396 | None:intergenic | 30.0% | |
| CTAAAGTTGACTACCTTAAT+AGG | + | chr6.3:27581178-27581197 | MS.gene80354:intron | 30.0% | |
| GAACTCAGATATCTTAAGTA+AGG | - | chr6.3:27582656-27582675 | None:intergenic | 30.0% | |
| GAATAAATCTTGCCTTTCTT+TGG | - | chr6.3:27581726-27581745 | None:intergenic | 30.0% | |
| GATACTTTACACCAATAACA+GGG | - | chr6.3:27582553-27582572 | None:intergenic | 30.0% | |
| GATGAATCTTCTATGATATC+AGG | + | chr6.3:27583752-27583771 | MS.gene80354:intron | 30.0% | |
| GATTGATATTCCATACTAAC+CGG | + | chr6.3:27580628-27580647 | MS.gene80354:intron | 30.0% | |
| GCAAAGTCTCTTAGATATAT+TGG | + | chr6.3:27581919-27581938 | MS.gene80354:CDS | 30.0% | |
| GTAATTATATGTGACGGTTT+CGG | - | chr6.3:27578091-27578110 | None:intergenic | 30.0% | |
| GTGAATAAAAAAAATGCGGT+TGG | - | chr6.3:27582616-27582635 | None:intergenic | 30.0% | |
| TAAACATTAATAGAGAGCAG+AGG | - | chr6.3:27581599-27581618 | None:intergenic | 30.0% | |
| TACATACACTCTTCACTAAT+GGG | - | chr6.3:27582449-27582468 | None:intergenic | 30.0% | |
| TAGAAGATTCATCAGTTGAT+TGG | - | chr6.3:27583745-27583764 | None:intergenic | 30.0% | |
| TATCAGTGCTTCATTAAACA+TGG | + | chr6.3:27578189-27578208 | MS.gene80354:intron | 30.0% | |
| TCATAGCTACCAAGAAATAT+GGG | - | chr6.3:27583816-27583835 | None:intergenic | 30.0% | |
| TGAGATTACTCTTGCAATAA+TGG | + | chr6.3:27579049-27579068 | MS.gene80354:intron | 30.0% | |
| TGATACTGCCTGATTAAAAA+AGG | + | chr6.3:27578259-27578278 | MS.gene80354:intron | 30.0% | |
| TTATGTTAATTGTTGGTGTG+TGG | + | chr6.3:27581685-27581704 | MS.gene80354:intron | 30.0% | |
| ! | ACTCTGATGTAAAGTTTGTT+CGG | - | chr6.3:27583557-27583576 | None:intergenic | 30.0% |
| ! | CCAATTGTTTCAACTTTTGT+GGG | - | chr6.3:27582489-27582508 | None:intergenic | 30.0% |
| ! | GATCTTTCATGCAATTTTGT+TGG | - | chr6.3:27583792-27583811 | None:intergenic | 30.0% |
| ! | TCCAATTGTTTCAACTTTTG+TGG | - | chr6.3:27582490-27582509 | None:intergenic | 30.0% |
| ! | TTACATTGCTGTTGTAATTG+TGG | + | chr6.3:27578583-27578602 | MS.gene80354:intron | 30.0% |
| !! | TTTTGGAAGTTTGCATCTTA+TGG | - | chr6.3:27583302-27583321 | None:intergenic | 30.0% |
| !!! | GCCTTATTTTTATCCTAGTT+TGG | + | chr6.3:27581545-27581564 | MS.gene80354:intron | 30.0% |
| !!! | GTTGTTTTTGATCCATTAGA+CGG | + | chr6.3:27580327-27580346 | MS.gene80354:CDS | 30.0% |
| !!! | TATGTTTTAACAGTGCATCT+TGG | + | chr6.3:27579925-27579944 | MS.gene80354:intron | 30.0% |
| AAAACAACACAGTAGGGATT+AGG | - | chr6.3:27580398-27580417 | None:intergenic | 35.0% | |
| AAACAACACAGTAGGGATTA+GGG | - | chr6.3:27580397-27580416 | None:intergenic | 35.0% | |
| AAACCAAGTGCATAGAATAG+AGG | - | chr6.3:27582519-27582538 | None:intergenic | 35.0% | |
| AAATGCAAGTTTCCAACAGA+TGG | + | chr6.3:27581889-27581908 | MS.gene80354:CDS | 35.0% | |
| AAGCATGTTAGACTCTTTCT+AGG | - | chr6.3:27581966-27581985 | None:intergenic | 35.0% | |
| AAGTTAAACTTCTCCCTAGA+AGG | - | chr6.3:27580240-27580259 | None:intergenic | 35.0% | |
| AATTGACACCGGAAATATTC+CGG | - | chr6.3:27580650-27580669 | None:intergenic | 35.0% | |
| ACATTGCTATAGCTGCTATT+TGG | - | chr6.3:27579599-27579618 | None:intergenic | 35.0% | |
| AGACTCAAGAAGCTGAAAAA+TGG | - | chr6.3:27582383-27582402 | None:intergenic | 35.0% | |
| AGAGTCCAAATGGAAAACTT+CGG | + | chr6.3:27582920-27582939 | MS.gene80354:CDS | 35.0% | |
| AGCATGTTAGACTCTTTCTA+GGG | - | chr6.3:27581965-27581984 | None:intergenic | 35.0% | |
| AGTACCAAACATAAAGGCTA+AGG | + | chr6.3:27578693-27578712 | MS.gene80354:intron | 35.0% | |
| AGTTGCTCATAGCTTAGTTA+GGG | - | chr6.3:27583520-27583539 | None:intergenic | 35.0% | |
| ATCAGATGCTGTTGTAATCA+AGG | + | chr6.3:27580099-27580118 | MS.gene80354:intron | 35.0% | |
| CATACTAACCGGAATATTTC+CGG | + | chr6.3:27580639-27580658 | MS.gene80354:intron | 35.0% | |
| CCATGACTGTATATCAATCA+CGG | - | chr6.3:27578535-27578554 | None:intergenic | 35.0% | |
| CCCACAAAAGTTGAAACAAT+TGG | + | chr6.3:27582486-27582505 | MS.gene80354:intron | 35.0% | |
| CGACAATTCAAAACCTTCTA+GGG | + | chr6.3:27580224-27580243 | MS.gene80354:intron | 35.0% | |
| GAAAGATCTCCCATATTTCT+TGG | + | chr6.3:27583804-27583823 | MS.gene80354:CDS | 35.0% | |
| GATATCTTAAGTAAGGTCTC+GGG | - | chr6.3:27582649-27582668 | None:intergenic | 35.0% | |
| GCAAAATGTTCAATTGACAC+CGG | - | chr6.3:27580661-27580680 | None:intergenic | 35.0% | |
| GCAGAATATACCTTAATGTC+AGG | - | chr6.3:27580992-27581011 | None:intergenic | 35.0% | |
| GCATTCAGTACCAAACATAA+AGG | + | chr6.3:27578687-27578706 | MS.gene80354:intron | 35.0% | |
| GGATACTTTACACCAATAAC+AGG | - | chr6.3:27582554-27582573 | None:intergenic | 35.0% | |
| GGTTAAAGAGACATCAAAAG+TGG | + | chr6.3:27578553-27578572 | MS.gene80354:intron | 35.0% | |
| GTATGGAAATTAGCATAACG+TGG | + | chr6.3:27583489-27583508 | MS.gene80354:intron | 35.0% | |
| GTGTCAATTCGACAAATTCA+AGG | + | chr6.3:27581310-27581329 | MS.gene80354:intron | 35.0% | |
| GTTCATCGTACATTGCTATA+TGG | + | chr6.3:27582868-27582887 | MS.gene80354:CDS | 35.0% | |
| TAAAAAAAATGCGGTTGGGA+TGG | - | chr6.3:27582611-27582630 | None:intergenic | 35.0% | |
| TAGTTGCTCATAGCTTAGTT+AGG | - | chr6.3:27583521-27583540 | None:intergenic | 35.0% | |
| TCGACAATTCAAAACCTTCT+AGG | + | chr6.3:27580223-27580242 | MS.gene80354:intron | 35.0% | |
| TGTGATCTGTTCATAACTCT+TGG | + | chr6.3:27582406-27582425 | MS.gene80354:intron | 35.0% | |
| TGTTTGTTCTGCTGTTAACA+AGG | + | chr6.3:27577863-27577882 | MS.gene80354:CDS | 35.0% | |
| TTCATGGAACTAGCATTACT+AGG | + | chr6.3:27581124-27581143 | MS.gene80354:intron | 35.0% | |
| TTGATTACAACAGCATCTGA+TGG | - | chr6.3:27580100-27580119 | None:intergenic | 35.0% | |
| TTTGTGGGCAATAACTAATG+AGG | - | chr6.3:27582474-27582493 | None:intergenic | 35.0% | |
| ! | ACATACCGAAGTTTTCCATT+TGG | - | chr6.3:27582928-27582947 | None:intergenic | 35.0% |
| ! | AGAACCTGAGTTCGATTTTT+GGG | - | chr6.3:27578840-27578859 | None:intergenic | 35.0% |
| ! | TAAGTGTGTGTTTGGAATTG+CGG | + | chr6.3:27578648-27578667 | MS.gene80354:intron | 35.0% |
| ! | TACATTATCAAGCATTGTGC+CGG | + | chr6.3:27580190-27580209 | MS.gene80354:intron | 35.0% |
| ! | TATTTGAAGGCATGTATGTC+TGG | + | chr6.3:27580421-27580440 | MS.gene80354:intron | 35.0% |
| ! | TCCGAGTGATTTTTAAACAC+TGG | - | chr6.3:27581218-27581237 | None:intergenic | 35.0% |
| ! | TGAGTTTTCATGCTTTTGTG+TGG | + | chr6.3:27582355-27582374 | MS.gene80354:intron | 35.0% |
| ! | TTTATTTGCTAGTAACACCC+TGG | + | chr6.3:27578740-27578759 | MS.gene80354:intron | 35.0% |
| ! | TTTGGTACTGAATGCGATAT+TGG | - | chr6.3:27578682-27578701 | None:intergenic | 35.0% |
| !! | AGGTTGATATGAAGTAAGGA+AGG | + | chr6.3:27578279-27578298 | MS.gene80354:intron | 35.0% |
| !! | ATACGAACTTGCTCATTTTG+AGG | + | chr6.3:27581149-27581168 | MS.gene80354:intron | 35.0% |
| !! | GGATGAGTTCTAAACTTCTA+AGG | - | chr6.3:27583661-27583680 | None:intergenic | 35.0% |
| !! | GTCAAGCTCTAAACAAATAC+TGG | - | chr6.3:27581577-27581596 | None:intergenic | 35.0% |
| !! | GTTTTGTTATATGTGTAGGC+TGG | + | chr6.3:27579155-27579174 | MS.gene80354:intron | 35.0% |
| !! | TTTTAAACACTGGTCTACCA+TGG | - | chr6.3:27581208-27581227 | None:intergenic | 35.0% |
| !!! | ATTTTGAGTTACCATGCTCA+GGG | + | chr6.3:27577956-27577975 | MS.gene80354:intron | 35.0% |
| !!! | GATTTTCAAGTACCAGTCTA+TGG | + | chr6.3:27581487-27581506 | MS.gene80354:intron | 35.0% |
| AAGCCTCTATTCTATGCACT+TGG | + | chr6.3:27582513-27582532 | MS.gene80354:intron | 40.0% | |
| AAGTTAATCGGTAAAGTCGG+TGG | - | chr6.3:27582575-27582594 | None:intergenic | 40.0% | |
| AATGTCCTTCTTGATGGAAC+AGG | + | chr6.3:27583063-27583082 | MS.gene80354:CDS | 40.0% | |
| ACAACGTCAAAACCGTAGAT+TGG | - | chr6.3:27578617-27578636 | None:intergenic | 40.0% | |
| AGATGAGGATGCAATATTCG+TGG | + | chr6.3:27579958-27579977 | MS.gene80354:CDS | 40.0% | |
| ATAAAGGCTAAGGCCCTATT+TGG | + | chr6.3:27578703-27578722 | MS.gene80354:intron | 40.0% | |
| ATACATCACATTGATCCGAG+TGG | - | chr6.3:27582683-27582702 | None:intergenic | 40.0% | |
| ATAGATGATGTTCTGCAACC+AGG | + | chr6.3:27580725-27580744 | MS.gene80354:CDS | 40.0% | |
| ATCGATTGTGGTGTTTCCAT+TGG | + | chr6.3:27580360-27580379 | MS.gene80354:CDS | 40.0% | |
| ATGCTTACTGCCCATGTATT+AGG | + | chr6.3:27581980-27581999 | MS.gene80354:intron | 40.0% | |
| CAGTAGATCCCGAATTGTAA+TGG | - | chr6.3:27580886-27580905 | None:intergenic | 40.0% | |
| CATCGTACATTGCTATATGG+AGG | + | chr6.3:27582871-27582890 | MS.gene80354:CDS | 40.0% | |
| CATGATGGCTAGTGAAATGA+AGG | + | chr6.3:27579486-27579505 | MS.gene80354:intron | 40.0% | |
| CATTACAATTCGGGATCTAC+TGG | + | chr6.3:27580884-27580903 | MS.gene80354:intron | 40.0% | |
| CCAAACAAGGCCTAATACAT+GGG | - | chr6.3:27581993-27582012 | None:intergenic | 40.0% | |
| CCGTGATTGATATACAGTCA+TGG | + | chr6.3:27578532-27578551 | MS.gene80354:intron | 40.0% | |
| CGGAAATATTCCGGTTAGTA+TGG | - | chr6.3:27580641-27580660 | None:intergenic | 40.0% | |
| CTACAGTGGATCAATTCGAT+AGG | - | chr6.3:27581520-27581539 | None:intergenic | 40.0% | |
| CTACCATGGACAACCTATTA+AGG | - | chr6.3:27581194-27581213 | None:intergenic | 40.0% | |
| CTACCTTAATAGGTTGTCCA+TGG | + | chr6.3:27581188-27581207 | MS.gene80354:intron | 40.0% | |
| GCTACAATGCACGACAAAAT+CGG | - | chr6.3:27580078-27580097 | None:intergenic | 40.0% | |
| GCTGACAAAAAGAGTCCAAA+TGG | + | chr6.3:27582910-27582929 | MS.gene80354:CDS | 40.0% | |
| GCTTATCTTGATAAGCGCTT+AGG | + | chr6.3:27578893-27578912 | MS.gene80354:intron | 40.0% | |
| GCTTGATGTTCTTTCCAATG+AGG | + | chr6.3:27579797-27579816 | MS.gene80354:CDS | 40.0% | |
| GGAGACTTTAAGTGTGTGTT+TGG | + | chr6.3:27578640-27578659 | MS.gene80354:intron | 40.0% | |
| GGTCTGTTCAAATTCTGCTA+CGG | - | chr6.3:27579630-27579649 | None:intergenic | 40.0% | |
| GGTTGAAGAGACATCAAAAG+TGG | + | chr6.3:27578474-27578493 | MS.gene80354:intron | 40.0% | |
| GTCTGAGTTCATAAGCTCTT+TGG | - | chr6.3:27582230-27582249 | None:intergenic | 40.0% | |
| GTTCCATCAAGAAGGACATT+GGG | - | chr6.3:27583063-27583082 | None:intergenic | 40.0% | |
| TAGATGATGTTCTGCAACCA+GGG | + | chr6.3:27580726-27580745 | MS.gene80354:CDS | 40.0% | |
| TAGGGATCATACAGTTCCAA+TGG | - | chr6.3:27580379-27580398 | None:intergenic | 40.0% | |
| TATCTGAGTTCAGTTCCACT+CGG | + | chr6.3:27582665-27582684 | MS.gene80354:intron | 40.0% | |
| TCCAAACAAGGCCTAATACA+TGG | - | chr6.3:27581994-27582013 | None:intergenic | 40.0% | |
| TCTTTGCAGATCCCAAAGAA+AGG | + | chr6.3:27581711-27581730 | MS.gene80354:intron | 40.0% | |
| TGCAGAACATCATCTATGAC+TGG | - | chr6.3:27580722-27580741 | None:intergenic | 40.0% | |
| TGCTTAGACAGTGACTTAAC+TGG | - | chr6.3:27581400-27581419 | None:intergenic | 40.0% | |
| TGGCTAGTGAAATGAAGGTT+TGG | + | chr6.3:27579491-27579510 | MS.gene80354:intron | 40.0% | |
| TGGTAGCTATGATGATATCG+AGG | + | chr6.3:27583824-27583843 | MS.gene80354:CDS | 40.0% | |
| TGTTCCATCAAGAAGGACAT+TGG | - | chr6.3:27583064-27583083 | None:intergenic | 40.0% | |
| TTCCAAACTCCAAAAACGAC+AGG | - | chr6.3:27581466-27581485 | None:intergenic | 40.0% | |
| TTGCAGTTTGTGATAACCAC+TGG | + | chr6.3:27580908-27580927 | MS.gene80354:intron | 40.0% | |
| TTTGTCAGCAGGGTACAAAA+AGG | - | chr6.3:27582899-27582918 | None:intergenic | 40.0% | |
| TTTGTGATAACCACTGGAAG+TGG | + | chr6.3:27580914-27580933 | MS.gene80354:CDS | 40.0% | |
| ! | ACATTATCAAGCATTGTGCC+GGG | + | chr6.3:27580191-27580210 | MS.gene80354:intron | 40.0% |
| ! | CATCATCTATGACTGGTTCA+TGG | - | chr6.3:27580715-27580734 | None:intergenic | 40.0% |
| ! | CTTGGTTTCTGAAGAAGATG+AGG | + | chr6.3:27579943-27579962 | MS.gene80354:CDS | 40.0% |
| ! | GAGAACCTGAGTTCGATTTT+TGG | - | chr6.3:27578841-27578860 | None:intergenic | 40.0% |
| ! | GTTAGTGTTTCTGTTGTGTC+TGG | + | chr6.3:27578415-27578434 | MS.gene80354:intron | 40.0% |
| ! | TTGGACTCTTTTTGTCAGCA+GGG | - | chr6.3:27582909-27582928 | None:intergenic | 40.0% |
| ! | TTTCAAGTACCAGTCTATGG+TGG | + | chr6.3:27581490-27581509 | MS.gene80354:intron | 40.0% |
| ! | TTTGGACTCTTTTTGTCAGC+AGG | - | chr6.3:27582910-27582929 | None:intergenic | 40.0% |
| !! | ATACTGGTTTCGACCAAACT+AGG | - | chr6.3:27581561-27581580 | None:intergenic | 40.0% |
| !! | ATGAAGCACTGATACGAACA+AGG | - | chr6.3:27578183-27578202 | None:intergenic | 40.0% |
| !! | TACGAAGCACTGATACTTCT+CGG | + | chr6.3:27578030-27578049 | MS.gene80354:intron | 40.0% |
| !!! | GATTTTGAGTTACCATGCTC+AGG | + | chr6.3:27577955-27577974 | MS.gene80354:intron | 40.0% |
| AAAAAATGCGGTTGGGATGG+AGG | - | chr6.3:27582608-27582627 | None:intergenic | 45.0% | |
| AACAACTTTCCACGCTGCTT+AGG | - | chr6.3:27579986-27580005 | None:intergenic | 45.0% | |
| AACTTTCGTTAGAGCTGAGC+AGG | - | chr6.3:27581072-27581091 | None:intergenic | 45.0% | |
| AAGTCACTGTCTAAGCAACG+AGG | + | chr6.3:27581403-27581422 | MS.gene80354:intron | 45.0% | |
| AATTGTCGACATCATGTCCC+CGG | - | chr6.3:27580212-27580231 | None:intergenic | 45.0% | |
| ACCAAGTCACCATAAAGACG+AGG | - | chr6.3:27581288-27581307 | None:intergenic | 45.0% | |
| ACCATTAACACCACTTCCAG+TGG | - | chr6.3:27580927-27580946 | None:intergenic | 45.0% | |
| ACCCTGGTTTCTTTCACAAG+CGG | + | chr6.3:27578756-27578775 | MS.gene80354:intron | 45.0% | |
| ACTGAGACATGCCTAATACG+AGG | - | chr6.3:27578310-27578329 | None:intergenic | 45.0% | |
| AGGATAAACTCGCCAAGAGA+AGG | - | chr6.3:27580962-27580981 | None:intergenic | 45.0% | |
| AGTCACTGTCTAAGCAACGA+GGG | + | chr6.3:27581404-27581423 | MS.gene80354:intron | 45.0% | |
| ATAGGTGATCCACCATAGAC+TGG | - | chr6.3:27581502-27581521 | None:intergenic | 45.0% | |
| ATGAAGGGAATGCCAAGAAC+TGG | + | chr6.3:27581751-27581770 | MS.gene80354:CDS | 45.0% | |
| ATGCATTACCCTTTCCTTGC+CGG | - | chr6.3:27583107-27583126 | None:intergenic | 45.0% | |
| ATGTTGGAAGAGCCGTCTAA+TGG | - | chr6.3:27580342-27580361 | None:intergenic | 45.0% | |
| CAAAGCTCTTTATGCTGCAG+AGG | + | chr6.3:27583851-27583870 | MS.gene80354:CDS | 45.0% | |
| CAACCAAACTCCAGATCAGT+GGG | - | chr6.3:27578783-27578802 | None:intergenic | 45.0% | |
| CAAGGACACCAGACATGATA+TGG | - | chr6.3:27578165-27578184 | None:intergenic | 45.0% | |
| CACACATGTTTGTGTCATGC+CGG | - | chr6.3:27580473-27580492 | None:intergenic | 45.0% | |
| CCTAACTCACCCTGACATTA+AGG | + | chr6.3:27580979-27580998 | MS.gene80354:CDS | 45.0% | |
| CCTTAATGTCAGGGTGAGTT+AGG | - | chr6.3:27580982-27581001 | None:intergenic | 45.0% | |
| CGTCAAGTGCAGAAAACCTA+TGG | - | chr6.3:27577927-27577946 | None:intergenic | 45.0% | |
| CTGAATTCATACGTACGCAG+CGG | - | chr6.3:27581787-27581806 | None:intergenic | 45.0% | |
| CTTCCCAATGTCCTTCTTGA+TGG | + | chr6.3:27583057-27583076 | MS.gene80354:CDS | 45.0% | |
| GAAACACTAACACGTCGACA+CGG | - | chr6.3:27578406-27578425 | None:intergenic | 45.0% | |
| GCAGCTGGTTATTGCATGTA+CGG | + | chr6.3:27580761-27580780 | MS.gene80354:CDS | 45.0% | |
| GGAAACACCACAATCGATGT+TGG | - | chr6.3:27580358-27580377 | None:intergenic | 45.0% | |
| GGATAAACTCGCCAAGAGAA+GGG | - | chr6.3:27580961-27580980 | None:intergenic | 45.0% | |
| GGGAACACTTACCTGAACAT+TGG | - | chr6.3:27579213-27579232 | None:intergenic | 45.0% | |
| GTCAGTGTCCATATCATGTC+TGG | + | chr6.3:27578154-27578173 | MS.gene80354:intron | 45.0% | |
| GTCTGGTGTTCAACATGTGT+CGG | + | chr6.3:27580438-27580457 | MS.gene80354:intron | 45.0% | |
| GTGAAATCTCCACGTGATTC+AGG | - | chr6.3:27577807-27577826 | None:intergenic | 45.0% | |
| GTGGTTAAGCTGCCAATCTA+CGG | + | chr6.3:27578602-27578621 | MS.gene80354:intron | 45.0% | |
| TCCACCCAAAAATCGAACTC+AGG | + | chr6.3:27578833-27578852 | MS.gene80354:intron | 45.0% | |
| TCCTCGTCTTTATGGTGACT+TGG | + | chr6.3:27581284-27581303 | MS.gene80354:intron | 45.0% | |
| TCGCAGATCGCAACATATAG+TGG | - | chr6.3:27579651-27579670 | None:intergenic | 45.0% | |
| TCTAAGCATCCTGAATCACG+TGG | + | chr6.3:27577795-27577814 | MS.gene80354:CDS | 45.0% | |
| TGAAGGGAATGCCAAGAACT+GGG | + | chr6.3:27581752-27581771 | MS.gene80354:CDS | 45.0% | |
| TGTGAGCTTCTACTGCCAAT+GGG | - | chr6.3:27581263-27581282 | None:intergenic | 45.0% | |
| TGTGAGCTTCTACTTCCAGA+AGG | + | chr6.3:27581435-27581454 | MS.gene80354:intron | 45.0% | |
| TGTTTGTGTCATGCCGGTAT+CGG | - | chr6.3:27580467-27580486 | None:intergenic | 45.0% | |
| TTTGCTGGTGAACCATCTGT+TGG | - | chr6.3:27581904-27581923 | None:intergenic | 45.0% | |
| ! | ACCACTGGAAGTGGTGTTAA+TGG | + | chr6.3:27580923-27580942 | MS.gene80354:CDS | 45.0% |
| ! | ACTCTTCACTAATGGGTCAG+TGG | - | chr6.3:27582442-27582461 | None:intergenic | 45.0% |
| ! | AGGGCCTTAGCCTTTATGTT+TGG | - | chr6.3:27578700-27578719 | None:intergenic | 45.0% |
| ! | CACTGATCTGGAGTTTGGTT+GGG | + | chr6.3:27578782-27578801 | MS.gene80354:intron | 45.0% |
| ! | CATTATCAAGCATTGTGCCG+GGG | + | chr6.3:27580192-27580211 | MS.gene80354:intron | 45.0% |
| ! | GCACTGATACTTCTCGGATT+AGG | + | chr6.3:27578036-27578055 | MS.gene80354:intron | 45.0% |
| ! | GCTCAGCTCTAACGAAAGTT+GGG | + | chr6.3:27581072-27581091 | MS.gene80354:intron | 45.0% |
| ! | TGCAAGGCTTTGATAAGCAG+TGG | + | chr6.3:27579825-27579844 | MS.gene80354:CDS | 45.0% |
| ! | TGCTCAGCTCTAACGAAAGT+TGG | + | chr6.3:27581071-27581090 | MS.gene80354:intron | 45.0% |
| ! | TTCCAATGAGGTGTTCTGCA+AGG | + | chr6.3:27579809-27579828 | MS.gene80354:CDS | 45.0% |
| !! | ACCTGAGTTCGATTTTTGGG+TGG | - | chr6.3:27578837-27578856 | None:intergenic | 45.0% |
| !! | CCCATGTATTAGGCCTTGTT+TGG | + | chr6.3:27581990-27582009 | MS.gene80354:intron | 45.0% |
| !! | CGAACTTGCTCATTTTGAGG+CGG | + | chr6.3:27581152-27581171 | MS.gene80354:intron | 45.0% |
| !! | CTACGGTTTTGACGTTGTTG+TGG | + | chr6.3:27578619-27578638 | MS.gene80354:intron | 45.0% |
| !! | GATTAGGAGTGTCTTGGTGT+CGG | + | chr6.3:27578052-27578071 | MS.gene80354:intron | 45.0% |
| !! | TTCTCGGATTAGGAGTGTCT+TGG | + | chr6.3:27578046-27578065 | MS.gene80354:intron | 45.0% |
| !!! | AACTTGCTCATTTTGAGGCG+GGG | + | chr6.3:27581154-27581173 | MS.gene80354:intron | 45.0% |
| !!! | AAGGCAATGCCTGTCGTTTT+TGG | + | chr6.3:27581454-27581473 | MS.gene80354:intron | 45.0% |
| !!! | GAACTTGCTCATTTTGAGGC+GGG | + | chr6.3:27581153-27581172 | MS.gene80354:intron | 45.0% |
| !!! | TGCCTGTCGTTTTTGGAGTT+TGG | + | chr6.3:27581461-27581480 | MS.gene80354:intron | 45.0% |
| !!! | TTAAAAAATGATTTTTATTA+TGG | - | chr6.3:27583190-27583209 | None:intergenic | 5.0% |
| AGCAGTGGCAGAACAGTAAG+TGG | + | chr6.3:27579840-27579859 | MS.gene80354:intron | 50.0% | |
| AGCCTTGCAGAACACCTCAT+TGG | - | chr6.3:27579814-27579833 | None:intergenic | 50.0% | |
| ATTCATACGTACGCAGCGGT+AGG | - | chr6.3:27581783-27581802 | None:intergenic | 50.0% | |
| CATGTACGGAAGCTCTTGCA+CGG | + | chr6.3:27580775-27580794 | MS.gene80354:CDS | 50.0% | |
| CCAACCAAACTCCAGATCAG+TGG | - | chr6.3:27578784-27578803 | None:intergenic | 50.0% | |
| CCCGCTTGTGAAAGAAACCA+GGG | - | chr6.3:27578760-27578779 | None:intergenic | 50.0% | |
| CCCTGGTTTCTTTCACAAGC+GGG | + | chr6.3:27578757-27578776 | MS.gene80354:intron | 50.0% | |
| CGGCATGACACAAACATGTG+TGG | + | chr6.3:27580471-27580490 | MS.gene80354:intron | 50.0% | |
| CTACTGCCAATGGGCGTATT+CGG | - | chr6.3:27581254-27581273 | None:intergenic | 50.0% | |
| CTCAGGTTCTCCCAATCAGT+TGG | + | chr6.3:27578850-27578869 | MS.gene80354:intron | 50.0% | |
| GCAAAGCTCATTGGACTTGC+AGG | + | chr6.3:27579182-27579201 | MS.gene80354:CDS | 50.0% | |
| GCTCACACTCCTCGTCTTTA+TGG | + | chr6.3:27581276-27581295 | MS.gene80354:intron | 50.0% | |
| GCTGCTAACATGTTCTTCCC+TGG | - | chr6.3:27580746-27580765 | None:intergenic | 50.0% | |
| GGAAGGACACTCCTCGTATT+AGG | + | chr6.3:27578296-27578315 | MS.gene80354:intron | 50.0% | |
| GGGAAGAACATGTTAGCAGC+TGG | + | chr6.3:27580746-27580765 | MS.gene80354:CDS | 50.0% | |
| GTGTGAGCTTCTACTGCCAA+TGG | - | chr6.3:27581264-27581283 | None:intergenic | 50.0% | |
| TCCTGCCTGTTCCATCAAGA+AGG | - | chr6.3:27583071-27583090 | None:intergenic | 50.0% | |
| TCCTTCTTGATGGAACAGGC+AGG | + | chr6.3:27583067-27583086 | MS.gene80354:CDS | 50.0% | |
| TGCAGGAGAGACCAATGTTC+AGG | + | chr6.3:27579199-27579218 | MS.gene80354:CDS | 50.0% | |
| TTCACTCTCGACCCTTCTCT+TGG | + | chr6.3:27580947-27580966 | MS.gene80354:CDS | 50.0% | |
| TTCTTGATGGAACAGGCAGG+AGG | + | chr6.3:27583070-27583089 | MS.gene80354:CDS | 50.0% | |
| ! | AAACGACAGGCATTGCCTTC+TGG | - | chr6.3:27581453-27581472 | None:intergenic | 50.0% |
| ! | CCACTGATCTGGAGTTTGGT+TGG | + | chr6.3:27578781-27578800 | MS.gene80354:intron | 50.0% |
| ! | GGCTCTTCCAACATCGATTG+TGG | + | chr6.3:27580348-27580367 | MS.gene80354:CDS | 50.0% |
| ! | GTGTGTGTTTGGAATTGCGG+TGG | + | chr6.3:27578651-27578670 | MS.gene80354:intron | 50.0% |
| ! | TGATCTGGAGTTTGGTTGGG+AGG | + | chr6.3:27578785-27578804 | MS.gene80354:intron | 50.0% |
| !! | GCTGGTCTTGCAAAGCTCAT+TGG | + | chr6.3:27579173-27579192 | MS.gene80354:CDS | 50.0% |
| AGGCTTTCACCGGCAAGGAA+AGG | + | chr6.3:27583095-27583114 | MS.gene80354:CDS | 55.0% | |
| ATCAGTGGTGACCCTGAGCA+TGG | - | chr6.3:27577970-27577989 | None:intergenic | 55.0% | |
| CAACGACCGAATACGCCCAT+TGG | + | chr6.3:27581245-27581264 | MS.gene80354:intron | 55.0% | |
| GCCCGCTTGTGAAAGAAACC+AGG | - | chr6.3:27578761-27578780 | None:intergenic | 55.0% | |
| GGCTTTCACCGGCAAGGAAA+GGG | + | chr6.3:27583096-27583115 | MS.gene80354:CDS | 55.0% | |
| GGGAATGCCAAGAACTGGGA+TGG | + | chr6.3:27581756-27581775 | MS.gene80354:CDS | 55.0% | |
| GGTAGGACCATCCCAGTTCT+TGG | - | chr6.3:27581766-27581785 | None:intergenic | 55.0% | |
| TACGATGTGCATCTGCGCTG+TGG | - | chr6.3:27577734-27577753 | None:intergenic | 55.0% | |
| TTCGTGGATCCTAAGCAGCG+TGG | + | chr6.3:27579974-27579993 | MS.gene80354:CDS | 55.0% | |
| TTCGTTAGAGCTGAGCAGGC+AGG | - | chr6.3:27581068-27581087 | None:intergenic | 55.0% | |
| ! | CATGTGTCGGTGTCCGATAC+CGG | + | chr6.3:27580451-27580470 | MS.gene80354:intron | 55.0% |
| AGGACAGGCTTTCACCGGCA+AGG | + | chr6.3:27583090-27583109 | MS.gene80354:CDS | 60.0% | |
| GATGGAACAGGCAGGAGGAC+AGG | + | chr6.3:27583075-27583094 | MS.gene80354:CDS | 60.0% | |
| GCAGGAGGACAGGCTTTCAC+CGG | + | chr6.3:27583085-27583104 | MS.gene80354:CDS | 60.0% | |
| TTAGAGCTGAGCAGGCAGGC+AGG | - | chr6.3:27581064-27581083 | None:intergenic | 60.0% | |
| ! | GGGCCCACTGATCTGGAGTT+TGG | + | chr6.3:27578777-27578796 | MS.gene80354:intron | 60.0% |
| CACAAGCGGGCCCACTGATC+TGG | + | chr6.3:27578770-27578789 | MS.gene80354:intron | 65.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr6.3 | gene | 27577726 | 27583881 | 27577726 | ID=MS.gene80354 |
| chr6.3 | mRNA | 27577726 | 27583881 | 27577726 | ID=MS.gene80354.t1;Parent=MS.gene80354 |
| chr6.3 | exon | 27577726 | 27577884 | 27577726 | ID=MS.gene80354.t1.exon1;Parent=MS.gene80354.t1 |
| chr6.3 | CDS | 27577726 | 27577884 | 27577726 | ID=cds.MS.gene80354.t1;Parent=MS.gene80354.t1 |
| chr6.3 | exon | 27579173 | 27579220 | 27579173 | ID=MS.gene80354.t1.exon2;Parent=MS.gene80354.t1 |
| chr6.3 | CDS | 27579173 | 27579220 | 27579173 | ID=cds.MS.gene80354.t1;Parent=MS.gene80354.t1 |
| chr6.3 | exon | 27579780 | 27579854 | 27579780 | ID=MS.gene80354.t1.exon3;Parent=MS.gene80354.t1 |
| chr6.3 | CDS | 27579780 | 27579854 | 27579780 | ID=cds.MS.gene80354.t1;Parent=MS.gene80354.t1 |
| chr6.3 | exon | 27579938 | 27579999 | 27579938 | ID=MS.gene80354.t1.exon4;Parent=MS.gene80354.t1 |
| chr6.3 | CDS | 27579938 | 27579999 | 27579938 | ID=cds.MS.gene80354.t1;Parent=MS.gene80354.t1 |
| chr6.3 | exon | 27580320 | 27580386 | 27580320 | ID=MS.gene80354.t1.exon5;Parent=MS.gene80354.t1 |
| chr6.3 | CDS | 27580320 | 27580386 | 27580320 | ID=cds.MS.gene80354.t1;Parent=MS.gene80354.t1 |
| chr6.3 | exon | 27580683 | 27580796 | 27580683 | ID=MS.gene80354.t1.exon6;Parent=MS.gene80354.t1 |
| chr6.3 | CDS | 27580683 | 27580796 | 27580683 | ID=cds.MS.gene80354.t1;Parent=MS.gene80354.t1 |
| chr6.3 | exon | 27580914 | 27581000 | 27580914 | ID=MS.gene80354.t1.exon7;Parent=MS.gene80354.t1 |
| chr6.3 | CDS | 27580914 | 27581000 | 27580914 | ID=cds.MS.gene80354.t1;Parent=MS.gene80354.t1 |
| chr6.3 | exon | 27581720 | 27581790 | 27581720 | ID=MS.gene80354.t1.exon8;Parent=MS.gene80354.t1 |
| chr6.3 | CDS | 27581720 | 27581790 | 27581720 | ID=cds.MS.gene80354.t1;Parent=MS.gene80354.t1 |
| chr6.3 | exon | 27581879 | 27581944 | 27581879 | ID=MS.gene80354.t1.exon9;Parent=MS.gene80354.t1 |
| chr6.3 | CDS | 27581879 | 27581944 | 27581879 | ID=cds.MS.gene80354.t1;Parent=MS.gene80354.t1 |
| chr6.3 | exon | 27582855 | 27582941 | 27582855 | ID=MS.gene80354.t1.exon10;Parent=MS.gene80354.t1 |
| chr6.3 | CDS | 27582855 | 27582941 | 27582855 | ID=cds.MS.gene80354.t1;Parent=MS.gene80354.t1 |
| chr6.3 | exon | 27583042 | 27583117 | 27583042 | ID=MS.gene80354.t1.exon11;Parent=MS.gene80354.t1 |
| chr6.3 | CDS | 27583042 | 27583117 | 27583042 | ID=cds.MS.gene80354.t1;Parent=MS.gene80354.t1 |
| chr6.3 | exon | 27583774 | 27583881 | 27583774 | ID=MS.gene80354.t1.exon12;Parent=MS.gene80354.t1 |
| chr6.3 | CDS | 27583774 | 27583881 | 27583774 | ID=cds.MS.gene80354.t1;Parent=MS.gene80354.t1 |
| Gene Sequence |
| Protein sequence |
