Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene82699.t1 | XP_003600045.1 | 98.6 | 147 | 2 | 0 | 1 | 147 | 1 | 147 | 5.80E-78 | 300.1 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene82699.t1 | G7IXJ5 | 98.6 | 147 | 2 | 0 | 1 | 147 | 1 | 147 | 4.2e-78 | 300.1 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| MS.gene049142 | MS.gene82699 | 0.851417 | 9.00E-61 | -1.69E-46 |
| MS.gene049159 | MS.gene82699 | 0.859832 | 3.15E-63 | -1.69E-46 |
| MS.gene049254 | MS.gene82699 | 0.829836 | 4.12E-55 | -1.69E-46 |
| MS.gene049404 | MS.gene82699 | 0.86251 | 4.82E-64 | -1.69E-46 |
| MS.gene049435 | MS.gene82699 | 0.810416 | 1.17E-50 | -1.69E-46 |
| MS.gene049501 | MS.gene82699 | 0.82172 | 3.47E-53 | -1.69E-46 |
| MS.gene049711 | MS.gene82699 | 0.825812 | 3.82E-54 | -1.69E-46 |
| MS.gene049850 | MS.gene82699 | 0.847901 | 8.63E-60 | -1.69E-46 |
| MS.gene050020 | MS.gene82699 | 0.81726 | 3.62E-52 | -1.69E-46 |
| MS.gene05016 | MS.gene82699 | 0.826607 | 2.47E-54 | -1.69E-46 |
| MS.gene050273 | MS.gene82699 | 0.820056 | 8.39E-53 | -1.69E-46 |
| MS.gene050442 | MS.gene82699 | 0.825211 | 5.30E-54 | -1.69E-46 |
| MS.gene05045 | MS.gene82699 | 0.802338 | 5.88E-49 | -1.69E-46 |
| MS.gene050559 | MS.gene82699 | 0.82442 | 8.15E-54 | -1.69E-46 |
| MS.gene050561 | MS.gene82699 | 0.833462 | 5.26E-56 | -1.69E-46 |
| MS.gene050562 | MS.gene82699 | 0.81378 | 2.15E-51 | -1.69E-46 |
| MS.gene050680 | MS.gene82699 | 0.825595 | 4.30E-54 | -1.69E-46 |
| MS.gene050719 | MS.gene82699 | 0.812892 | 3.37E-51 | -1.69E-46 |
| MS.gene050721 | MS.gene82699 | 0.811674 | 6.22E-51 | -1.69E-46 |
| MS.gene050724 | MS.gene82699 | 0.815362 | 9.61E-52 | -1.69E-46 |
| MS.gene050780 | MS.gene82699 | 0.833488 | 5.18E-56 | -1.69E-46 |
| MS.gene050807 | MS.gene82699 | 0.856129 | 3.96E-62 | -1.69E-46 |
| MS.gene050808 | MS.gene82699 | 0.812158 | 4.88E-51 | -1.69E-46 |
| MS.gene050826 | MS.gene82699 | 0.835975 | 1.23E-56 | -1.69E-46 |
| MS.gene050844 | MS.gene82699 | 0.816958 | 4.23E-52 | -1.69E-46 |
| MS.gene051102 | MS.gene82699 | 0.80655 | 7.79E-50 | -1.69E-46 |
| MS.gene051180 | MS.gene82699 | 0.810939 | 8.98E-51 | -1.69E-46 |
| MS.gene051198 | MS.gene82699 | 0.835524 | 1.60E-56 | -1.69E-46 |
| MS.gene051210 | MS.gene82699 | 0.804101 | 2.54E-49 | -1.69E-46 |
| MS.gene051247 | MS.gene82699 | 0.834465 | 2.95E-56 | -1.69E-46 |
| MS.gene051265 | MS.gene82699 | 0.804044 | 2.61E-49 | -1.69E-46 |
| MS.gene051279 | MS.gene82699 | 0.825268 | 5.14E-54 | -1.69E-46 |
| MS.gene051328 | MS.gene82699 | 0.807269 | 5.49E-50 | -1.69E-46 |
| MS.gene051388 | MS.gene82699 | 0.821394 | 4.13E-53 | -1.69E-46 |
| MS.gene051490 | MS.gene82699 | 0.817121 | 3.89E-52 | -1.69E-46 |
| MS.gene05157 | MS.gene82699 | 0.804464 | 2.13E-49 | -1.69E-46 |
| MS.gene051719 | MS.gene82699 | 0.844345 | 8.01E-59 | -1.69E-46 |
| MS.gene051720 | MS.gene82699 | 0.834751 | 2.50E-56 | -1.69E-46 |
| MS.gene051744 | MS.gene82699 | 0.854429 | 1.24E-61 | -1.69E-46 |
| MS.gene051800 | MS.gene82699 | 0.829897 | 3.98E-55 | -1.69E-46 |
| MS.gene051957 | MS.gene82699 | 0.808657 | 2.78E-50 | -1.69E-46 |
| MS.gene052020 | MS.gene82699 | 0.814511 | 1.48E-51 | -1.69E-46 |
| MS.gene052323 | MS.gene82699 | 0.819288 | 1.26E-52 | -1.69E-46 |
| MS.gene052516 | MS.gene82699 | 0.860093 | 2.63E-63 | -1.69E-46 |
| MS.gene052519 | MS.gene82699 | 0.821409 | 4.10E-53 | -1.69E-46 |
| MS.gene052611 | MS.gene82699 | 0.851301 | 9.70E-61 | -1.69E-46 |
| MS.gene052612 | MS.gene82699 | 0.80123 | 9.93E-49 | -1.69E-46 |
| MS.gene052665 | MS.gene82699 | 0.823177 | 1.59E-53 | -1.69E-46 |
| MS.gene052773 | MS.gene82699 | 0.833047 | 6.67E-56 | -1.69E-46 |
| MS.gene052863 | MS.gene82699 | 0.826007 | 3.44E-54 | -1.69E-46 |
| MS.gene052867 | MS.gene82699 | 0.818121 | 2.31E-52 | -1.69E-46 |
| MS.gene052896 | MS.gene82699 | 0.812094 | 5.04E-51 | -1.69E-46 |
| MS.gene053008 | MS.gene82699 | 0.823411 | 1.41E-53 | -1.69E-46 |
| MS.gene053079 | MS.gene82699 | 0.803047 | 4.20E-49 | -1.69E-46 |
| MS.gene053144 | MS.gene82699 | 0.819363 | 1.21E-52 | -1.69E-46 |
| MS.gene053166 | MS.gene82699 | 0.858294 | 9.09E-63 | -1.69E-46 |
| MS.gene053226 | MS.gene82699 | 0.842648 | 2.27E-58 | -1.69E-46 |
| MS.gene053565 | MS.gene82699 | 0.816565 | 5.18E-52 | -1.69E-46 |
| MS.gene053581 | MS.gene82699 | 0.820106 | 8.17E-53 | -1.69E-46 |
| MS.gene053599 | MS.gene82699 | 0.800271 | 1.56E-48 | -1.69E-46 |
| MS.gene053621 | MS.gene82699 | 0.809686 | 1.67E-50 | -1.69E-46 |
| MS.gene053966 | MS.gene82699 | 0.801703 | 7.95E-49 | -1.69E-46 |
| MS.gene053998 | MS.gene82699 | 0.82706 | 1.93E-54 | -1.69E-46 |
| MS.gene05415 | MS.gene82699 | 0.825076 | 5.71E-54 | -1.69E-46 |
| MS.gene054236 | MS.gene82699 | 0.82729 | 1.70E-54 | -1.69E-46 |
| MS.gene05423 | MS.gene82699 | 0.80208 | 6.65E-49 | -1.69E-46 |
| MS.gene054467 | MS.gene82699 | 0.846968 | 1.56E-59 | -1.69E-46 |
| MS.gene054468 | MS.gene82699 | 0.809103 | 2.23E-50 | -1.69E-46 |
| MS.gene054472 | MS.gene82699 | 0.833866 | 4.17E-56 | -1.69E-46 |
| MS.gene05447 | MS.gene82699 | 0.81465 | 1.38E-51 | -1.69E-46 |
| MS.gene054559 | MS.gene82699 | 0.809932 | 1.48E-50 | -1.69E-46 |
| MS.gene054584 | MS.gene82699 | 0.819392 | 1.19E-52 | -1.69E-46 |
| MS.gene05458 | MS.gene82699 | 0.804383 | 2.22E-49 | -1.69E-46 |
| MS.gene05462 | MS.gene82699 | 0.809173 | 2.16E-50 | -1.69E-46 |
| MS.gene054651 | MS.gene82699 | 0.850469 | 1.66E-60 | -1.69E-46 |
| MS.gene05468 | MS.gene82699 | 0.812442 | 4.23E-51 | -1.69E-46 |
| MS.gene054775 | MS.gene82699 | 0.835751 | 1.40E-56 | -1.69E-46 |
| MS.gene054801 | MS.gene82699 | 0.818629 | 1.77E-52 | -1.69E-46 |
| MS.gene05510 | MS.gene82699 | 0.811065 | 8.43E-51 | -1.69E-46 |
| MS.gene055227 | MS.gene82699 | 0.842671 | 2.24E-58 | -1.69E-46 |
| MS.gene055228 | MS.gene82699 | 0.818532 | 1.87E-52 | -1.69E-46 |
| MS.gene055356 | MS.gene82699 | 0.820447 | 6.83E-53 | -1.69E-46 |
| MS.gene055357 | MS.gene82699 | 0.808962 | 2.39E-50 | -1.69E-46 |
| MS.gene055358 | MS.gene82699 | 0.805692 | 1.18E-49 | -1.69E-46 |
| MS.gene055464 | MS.gene82699 | 0.837158 | 6.13E-57 | -1.69E-46 |
| MS.gene055465 | MS.gene82699 | 0.816958 | 4.23E-52 | -1.69E-46 |
| MS.gene055466 | MS.gene82699 | 0.834706 | 2.57E-56 | -1.69E-46 |
| MS.gene055468 | MS.gene82699 | 0.805523 | 1.28E-49 | -1.69E-46 |
| MS.gene055469 | MS.gene82699 | 0.801647 | 8.16E-49 | -1.69E-46 |
| MS.gene055512 | MS.gene82699 | 0.856903 | 2.35E-62 | -1.69E-46 |
| MS.gene055586 | MS.gene82699 | 0.801687 | 8.01E-49 | -1.69E-46 |
| MS.gene055608 | MS.gene82699 | 0.817015 | 4.10E-52 | -1.69E-46 |
| MS.gene055623 | MS.gene82699 | 0.837391 | 5.34E-57 | -1.69E-46 |
| MS.gene055778 | MS.gene82699 | 0.802031 | 6.80E-49 | -1.69E-46 |
| MS.gene055818 | MS.gene82699 | 0.857064 | 2.10E-62 | -1.69E-46 |
| MS.gene055890 | MS.gene82699 | 0.813365 | 2.66E-51 | -1.69E-46 |
| MS.gene055926 | MS.gene82699 | 0.845572 | 3.74E-59 | -1.69E-46 |
| MS.gene05604 | MS.gene82699 | 0.83753 | 4.92E-57 | -1.69E-46 |
| MS.gene056050 | MS.gene82699 | 0.833413 | 5.41E-56 | -1.69E-46 |
| MS.gene056162 | MS.gene82699 | 0.816366 | 5.74E-52 | -1.69E-46 |
| MS.gene056173 | MS.gene82699 | 0.829982 | 3.80E-55 | -1.69E-46 |
| MS.gene056174 | MS.gene82699 | 0.812973 | 3.24E-51 | -1.69E-46 |
| MS.gene056252 | MS.gene82699 | 0.803862 | 2.85E-49 | -1.69E-46 |
| MS.gene056308 | MS.gene82699 | 0.828684 | 7.84E-55 | -1.69E-46 |
| MS.gene056366 | MS.gene82699 | 0.851684 | 7.56E-61 | -1.69E-46 |
| MS.gene056507 | MS.gene82699 | 0.80741 | 5.12E-50 | -1.69E-46 |
| MS.gene056553 | MS.gene82699 | 0.831737 | 1.41E-55 | -1.69E-46 |
| MS.gene056595 | MS.gene82699 | 0.831734 | 1.41E-55 | -1.69E-46 |
| MS.gene056643 | MS.gene82699 | 0.806552 | 7.78E-50 | -1.69E-46 |
| MS.gene056760 | MS.gene82699 | 0.80246 | 5.55E-49 | -1.69E-46 |
| MS.gene056859 | MS.gene82699 | 0.803962 | 2.71E-49 | -1.69E-46 |
| MS.gene05686 | MS.gene82699 | 0.809876 | 1.52E-50 | -1.69E-46 |
| MS.gene057026 | MS.gene82699 | 0.80309 | 4.12E-49 | -1.69E-46 |
| MS.gene057060 | MS.gene82699 | 0.821308 | 4.33E-53 | -1.69E-46 |
| MS.gene057208 | MS.gene82699 | 0.805741 | 1.15E-49 | -1.69E-46 |
| MS.gene057314 | MS.gene82699 | 0.803305 | 3.71E-49 | -1.69E-46 |
| MS.gene057414 | MS.gene82699 | 0.805781 | 1.13E-49 | -1.69E-46 |
| MS.gene057444 | MS.gene82699 | 0.855379 | 6.57E-62 | -1.69E-46 |
| MS.gene057693 | MS.gene82699 | 0.82597 | 3.51E-54 | -1.69E-46 |
| MS.gene057869 | MS.gene82699 | 0.832326 | 1.01E-55 | -1.69E-46 |
| MS.gene057915 | MS.gene82699 | 0.829605 | 4.69E-55 | -1.69E-46 |
| MS.gene058009 | MS.gene82699 | 0.813415 | 2.59E-51 | -1.69E-46 |
| MS.gene058010 | MS.gene82699 | 0.852208 | 5.37E-61 | -1.69E-46 |
| MS.gene058339 | MS.gene82699 | 0.822863 | 1.89E-53 | -1.69E-46 |
| MS.gene05847 | MS.gene82699 | 0.824369 | 8.38E-54 | -1.69E-46 |
| MS.gene058625 | MS.gene82699 | 0.847112 | 1.42E-59 | -1.69E-46 |
| MS.gene058979 | MS.gene82699 | 0.842512 | 2.47E-58 | -1.69E-46 |
| MS.gene059015 | MS.gene82699 | 0.803173 | 3.96E-49 | -1.69E-46 |
| MS.gene059128 | MS.gene82699 | 0.828775 | 7.45E-55 | -1.69E-46 |
| MS.gene059161 | MS.gene82699 | 0.811479 | 6.86E-51 | -1.69E-46 |
| MS.gene059272 | MS.gene82699 | 0.818881 | 1.56E-52 | -1.69E-46 |
| MS.gene059382 | MS.gene82699 | 0.801393 | 9.20E-49 | -1.69E-46 |
| MS.gene059625 | MS.gene82699 | 0.816532 | 5.27E-52 | -1.69E-46 |
| MS.gene059713 | MS.gene82699 | 0.808538 | 2.95E-50 | -1.69E-46 |
| MS.gene059842 | MS.gene82699 | 0.835953 | 1.24E-56 | -1.69E-46 |
| MS.gene059937 | MS.gene82699 | 0.825411 | 4.76E-54 | -1.69E-46 |
| MS.gene060011 | MS.gene82699 | 0.819314 | 1.24E-52 | -1.69E-46 |
| MS.gene060167 | MS.gene82699 | 0.808348 | 3.24E-50 | -1.69E-46 |
| MS.gene060310 | MS.gene82699 | 0.831977 | 1.23E-55 | -1.69E-46 |
| MS.gene060312 | MS.gene82699 | 0.822861 | 1.89E-53 | -1.69E-46 |
| MS.gene060322 | MS.gene82699 | 0.859693 | 3.47E-63 | -1.69E-46 |
| MS.gene06052 | MS.gene82699 | 0.802492 | 5.47E-49 | -1.69E-46 |
| MS.gene060587 | MS.gene82699 | 0.823717 | 1.19E-53 | -1.69E-46 |
| MS.gene060637 | MS.gene82699 | 0.814125 | 1.81E-51 | -1.69E-46 |
| MS.gene060803 | MS.gene82699 | 0.836974 | 6.83E-57 | -1.69E-46 |
| MS.gene060918 | MS.gene82699 | 0.816428 | 5.56E-52 | -1.69E-46 |
| MS.gene060998 | MS.gene82699 | 0.830372 | 3.05E-55 | -1.69E-46 |
PPI:
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene82699.t1 | MTR_3g051110 | 98.639 | 147 | 2 | 0 | 1 | 147 | 1 | 147 | 1.42e-107 | 302 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene82699.t1 | AT5G54855 | 67.123 | 146 | 48 | 0 | 1 | 146 | 1 | 146 | 4.37e-73 | 215 |
Find 34 sgRNAs with CRISPR-Local
Find 267 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| CGTCTTGGTGGTGGTAGTTC+GGG | 0.246569 | 3.1:+38112980 | MS.gene82699:CDS |
| GTTTGTGGTGATTCTTCTCT+TGG | 0.332875 | 3.1:+38108920 | MS.gene82699:CDS |
| TCGTCTTGGTGGTGGTAGTT+CGG | 0.336867 | 3.1:+38112979 | MS.gene82699:CDS |
| CGGCGAAGTTCTAAATTATC+AGG | 0.338733 | 3.1:+38112847 | MS.gene82699:CDS |
| CCTTCAAGAACATGATCTTC+AGG | 0.398537 | 3.1:-38108944 | None:intergenic |
| ATTTAGAACTTCGCCGGACT+TGG | 0.414951 | 3.1:-38112840 | None:intergenic |
| TTCAGTTACAATCATCCATC+GGG | 0.416663 | 3.1:+38113010 | MS.gene82699:CDS |
| CCTGAAGATCATGTTCTTGA+AGG | 0.449881 | 3.1:+38108944 | MS.gene82699:CDS |
| CATGAGCACTGCACTCGTCT+TGG | 0.451233 | 3.1:+38112965 | MS.gene82699:CDS |
| AATGAAGCAGAAGATGATAG+TGG | 0.473190 | 3.1:+38108814 | MS.gene82699:CDS |
| TCAGGCATTTACAGATGCTA+AGG | 0.492192 | 3.1:+38112865 | MS.gene82699:CDS |
| CAGTATGTTGGAACATTGAC+AGG | 0.497172 | 3.1:-38113067 | None:intergenic |
| GTTCTTTGCATAACCAAGTC+CGG | 0.497448 | 3.1:+38112827 | MS.gene82699:CDS |
| ATTGATTGTGTTGTCGATGA+TGG | 0.498614 | 3.1:+38108838 | MS.gene82699:CDS |
| CAAGACGAGTGCAGTGCTCA+TGG | 0.501517 | 3.1:-38112964 | None:intergenic |
| TTGAGTGTAAGTGGTTGGAC+TGG | 0.520329 | 3.1:+38108869 | MS.gene82699:CDS |
| AGAGTTGTTTGTGATGTTTG+TGG | 0.528736 | 3.1:+38108905 | MS.gene82699:CDS |
| TGCTCATGGAAACTACTGAT+TGG | 0.530403 | 3.1:-38112950 | None:intergenic |
| CAGGCATTTACAGATGCTAA+GGG | 0.533023 | 3.1:+38112866 | MS.gene82699:CDS |
| GAGCACTGCACTCGTCTTGG+TGG | 0.534296 | 3.1:+38112968 | MS.gene82699:CDS |
| GCATCCCAACGATCACTCTC+AGG | 0.535746 | 3.1:-38112914 | None:intergenic |
| CTGATAATTTAGAACTTCGC+CGG | 0.538086 | 3.1:-38112846 | None:intergenic |
| CACTGCACTCGTCTTGGTGG+TGG | 0.544640 | 3.1:+38112971 | MS.gene82699:CDS |
| ATTCAGTTACAATCATCCAT+CGG | 0.553429 | 3.1:+38113009 | MS.gene82699:CDS |
| AATGCCTGAGAGTGATCGTT+GGG | 0.564183 | 3.1:+38112910 | MS.gene82699:CDS |
| CAATGCCTGAGAGTGATCGT+TGG | 0.565355 | 3.1:+38112909 | MS.gene82699:CDS |
| GTCTTGGTGGTGGTAGTTCG+GGG | 0.567915 | 3.1:+38112981 | MS.gene82699:CDS |
| ATATATCAGATGCAGTATGT+TGG | 0.578522 | 3.1:-38113079 | None:intergenic |
| GGTTGGACTGGTGAAATTCG+TGG | 0.595778 | 3.1:+38108881 | MS.gene82699:CDS |
| ATGTTGGAACATTGACAGGT+TGG | 0.603546 | 3.1:-38113063 | None:intergenic |
| ATTGACAGGTTGGTAAACAA+AGG | 0.608179 | 3.1:-38113053 | None:intergenic |
| ACAGCATGTGAATACCCCGA+TGG | 0.710104 | 3.1:-38113025 | None:intergenic |
| AGGCATTTACAGATGCTAAG+GGG | 0.710498 | 3.1:+38112867 | MS.gene82699:CDS |
| TCAGTTACAATCATCCATCG+GGG | 0.754079 | 3.1:+38113011 | MS.gene82699:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !!! | ATTTTAAAAATTAGTAAATC+TGG | + | chr3.1:38111198-38111217 | MS.gene82699:intron | 10.0% |
| !! | ATATTATGAAAAAACTTAAG+AGG | + | chr3.1:38111788-38111807 | MS.gene82699:intron | 15.0% |
| !! | ATTCATGTTAAAATAAATCT+GGG | - | chr3.1:38112724-38112743 | None:intergenic | 15.0% |
| !! | CTATTTCCTTAAATTATTAT+TGG | - | chr3.1:38112336-38112355 | None:intergenic | 15.0% |
| !! | TAGATACCAATAATAATTTA+AGG | + | chr3.1:38112327-38112346 | MS.gene82699:intron | 15.0% |
| !! | TATTCATGTTAAAATAAATC+TGG | - | chr3.1:38112725-38112744 | None:intergenic | 15.0% |
| !!! | ATATTTTTCACTAATCAATT+TGG | + | chr3.1:38111927-38111946 | MS.gene82699:intron | 15.0% |
| !!! | TATTTTTAAGGTTATTCTAA+GGG | - | chr3.1:38110550-38110569 | None:intergenic | 15.0% |
| !!! | TTGTTATTCTATAAAGATTT+TGG | + | chr3.1:38109498-38109517 | MS.gene82699:intron | 15.0% |
| !! | CAAATTATTCTTCTTCTATT+GGG | - | chr3.1:38109704-38109723 | None:intergenic | 20.0% |
| !! | CAATTTACTCAAATTATTAC+CGG | - | chr3.1:38109181-38109200 | None:intergenic | 20.0% |
| !! | TAGGGTTTCTAAATTATTTA+AGG | + | chr3.1:38112136-38112155 | MS.gene82699:intron | 20.0% |
| !! | TATGAAATGAAGAGATAATA+TGG | - | chr3.1:38110709-38110728 | None:intergenic | 20.0% |
| !! | TGTATATATATATGATGCTA+TGG | - | chr3.1:38111568-38111587 | None:intergenic | 20.0% |
| !! | TTAAACCAAAAAGTTTGAAA+TGG | - | chr3.1:38112685-38112704 | None:intergenic | 20.0% |
| !! | TTATGAATTCAAAAACAACT+CGG | - | chr3.1:38110325-38110344 | None:intergenic | 20.0% |
| !! | TTCATGTTAAAATAAATCTG+GGG | - | chr3.1:38112723-38112742 | None:intergenic | 20.0% |
| !! | TTTCTGTTGAAAATTTACTT+TGG | - | chr3.1:38109456-38109475 | None:intergenic | 20.0% |
| !! | TTTGATTGAGTTTATGAAAT+GGG | + | chr3.1:38109011-38109030 | MS.gene82699:intron | 20.0% |
| !!! | AAAAACCATTTCAAACTTTT+TGG | + | chr3.1:38112677-38112696 | MS.gene82699:intron | 20.0% |
| !!! | GTATTTTTAAGGTTATTCTA+AGG | - | chr3.1:38110551-38110570 | None:intergenic | 20.0% |
| !!! | TCACTTTTAATTTTTGTTTC+TGG | + | chr3.1:38110917-38110936 | MS.gene82699:intron | 20.0% |
| !!! | TTGTGAATTCTATATGATTT+TGG | + | chr3.1:38109038-38109057 | MS.gene82699:intron | 20.0% |
| !!! | TTTATGAAATGGGTTATTTT+GGG | + | chr3.1:38109066-38109085 | MS.gene82699:intron | 20.0% |
| !!! | TTTTGATTGAGTTTATGAAA+TGG | + | chr3.1:38109010-38109029 | MS.gene82699:intron | 20.0% |
| ! | AAATGAGGATAATGATTGTT+AGG | + | chr3.1:38110800-38110819 | MS.gene82699:intron | 25.0% |
| ! | AACAAATTGTTCGTAACATA+TGG | + | chr3.1:38109137-38109156 | MS.gene82699:intron | 25.0% |
| ! | AATATCTCATTCTTTGAGTA+AGG | + | chr3.1:38111462-38111481 | MS.gene82699:intron | 25.0% |
| ! | AATTTAAACAATGATACCAG+TGG | + | chr3.1:38111495-38111514 | MS.gene82699:intron | 25.0% |
| ! | ACCCTACTAAAAATTAGAAT+AGG | + | chr3.1:38112117-38112136 | MS.gene82699:intron | 25.0% |
| ! | AGGAAAAGAGAATATTTCAA+AGG | - | chr3.1:38110092-38110111 | None:intergenic | 25.0% |
| ! | AGTGTATATATATGATGCTA+TGG | - | chr3.1:38111639-38111658 | None:intergenic | 25.0% |
| ! | ATATGTTACGAACAATTTGT+TGG | - | chr3.1:38109138-38109157 | None:intergenic | 25.0% |
| ! | CAAAGAATGAGATATTGTAA+TGG | - | chr3.1:38111458-38111477 | None:intergenic | 25.0% |
| ! | CCCTACTAAAAATTAGAATA+GGG | + | chr3.1:38112118-38112137 | MS.gene82699:intron | 25.0% |
| ! | GATAATGATTGTTAGGAAAT+AGG | + | chr3.1:38110807-38110826 | MS.gene82699:intron | 25.0% |
| ! | GATTTCATTTAAGAAGTTGA+AGG | + | chr3.1:38110759-38110778 | MS.gene82699:intron | 25.0% |
| ! | GCAAATTATTCTTCTTCTAT+TGG | - | chr3.1:38109705-38109724 | None:intergenic | 25.0% |
| ! | GGAAAAGAGAATATTTCAAA+GGG | - | chr3.1:38110091-38110110 | None:intergenic | 25.0% |
| ! | GTTAATGTTTATTTCACAAG+TGG | + | chr3.1:38111163-38111182 | MS.gene82699:intron | 25.0% |
| ! | TAAATAGTGTATAAGAGAGA+GGG | - | chr3.1:38110033-38110052 | None:intergenic | 25.0% |
| ! | TATAATCACCTCACTTTATT+AGG | + | chr3.1:38109402-38109421 | MS.gene82699:intron | 25.0% |
| ! | TTTGGTAGAGTTTATGAAAT+GGG | + | chr3.1:38109056-38109075 | MS.gene82699:intron | 25.0% |
| !! | AATAACAAAACAAGTTGAAG+AGG | + | chr3.1:38111961-38111980 | MS.gene82699:intron | 25.0% |
| !! | ATAGAAGAAGAATAATTTGC+AGG | + | chr3.1:38109705-38109724 | MS.gene82699:intron | 25.0% |
| !! | ATTTGCGTATTTAACCATTT+TGG | + | chr3.1:38111417-38111436 | MS.gene82699:intron | 25.0% |
| !! | TAGAAGAAGAATAATTTGCA+GGG | + | chr3.1:38109706-38109725 | MS.gene82699:intron | 25.0% |
| !! | TTTTGGTAGAGTTTATGAAA+TGG | + | chr3.1:38109055-38109074 | MS.gene82699:intron | 25.0% |
| !!! | ACCCTATTCTAATTTTTAGT+AGG | - | chr3.1:38112122-38112141 | None:intergenic | 25.0% |
| !!! | CAATTTGTTGGAGAATTATA+AGG | - | chr3.1:38109126-38109145 | None:intergenic | 25.0% |
| !!! | CATACAAATGAGTCATTTTT+AGG | - | chr3.1:38111268-38111287 | None:intergenic | 25.0% |
| !!! | CCCTATTCTAATTTTTAGTA+GGG | - | chr3.1:38112121-38112140 | None:intergenic | 25.0% |
| !!! | GTTTATGAAATGGGTTATTT+TGG | + | chr3.1:38109065-38109084 | MS.gene82699:intron | 25.0% |
| !!! | TCATAAACCTTTTAAAACCT+TGG | + | chr3.1:38110339-38110358 | MS.gene82699:intron | 25.0% |
| !!! | TGAGATTTTGAGTTTTATGT+CGG | + | chr3.1:38110997-38111016 | MS.gene82699:intron | 25.0% |
| AAACACTTATGTGTATAGCA+AGG | - | chr3.1:38109531-38109550 | None:intergenic | 30.0% | |
| AAATCCGTTGTTTACTTACA+GGG | - | chr3.1:38109762-38109781 | None:intergenic | 30.0% | |
| AATACCCTGTAAGTAAACAA+CGG | + | chr3.1:38109755-38109774 | MS.gene82699:intron | 30.0% | |
| AATGAAGAGATAATATGGAG+AGG | - | chr3.1:38110704-38110723 | None:intergenic | 30.0% | |
| AATGGTTAAATACGCAAATG+TGG | - | chr3.1:38111416-38111435 | None:intergenic | 30.0% | |
| ACTAATATTTCCCCATAAAG+TGG | - | chr3.1:38109633-38109652 | None:intergenic | 30.0% | |
| ATAAGCAGATTCTTGTTAGA+AGG | + | chr3.1:38109574-38109593 | MS.gene82699:intron | 30.0% | |
| ATCAGTTACAGATCTATTGT+AGG | + | chr3.1:38112544-38112563 | MS.gene82699:intron | 30.0% | |
| ATCCGTTATTGCTTAAATAG+CGG | + | chr3.1:38110499-38110518 | MS.gene82699:intron | 30.0% | |
| ATGACTTAAACCAATTCTAG+AGG | - | chr3.1:38112268-38112287 | None:intergenic | 30.0% | |
| ATGCTATGGAAAATATAGTG+GGG | - | chr3.1:38111554-38111573 | None:intergenic | 30.0% | |
| ATTAGTTGTGCTGAACTATT+TGG | + | chr3.1:38110879-38110898 | MS.gene82699:intron | 30.0% | |
| ATTCAGTTACAATCATCCAT+CGG | + | chr3.1:38113009-38113028 | MS.gene82699:CDS | 30.0% | |
| CAAGACAGTGTGATTAATAA+CGG | - | chr3.1:38111131-38111150 | None:intergenic | 30.0% | |
| GATAGTAACCTAATAAAGTG+AGG | - | chr3.1:38109413-38109432 | None:intergenic | 30.0% | |
| GATGCTATGGAAAATATAGT+GGG | - | chr3.1:38111555-38111574 | None:intergenic | 30.0% | |
| GATGTACAACACTAATTTAG+AGG | - | chr3.1:38112075-38112094 | None:intergenic | 30.0% | |
| GTAAATAGTGTATAAGAGAG+AGG | - | chr3.1:38110034-38110053 | None:intergenic | 30.0% | |
| GTAACCAATTAAGTTTGTGT+TGG | + | chr3.1:38109213-38109232 | MS.gene82699:intron | 30.0% | |
| GTAGTGAAGACAAAACTTAT+TGG | + | chr3.1:38110235-38110254 | MS.gene82699:intron | 30.0% | |
| GTATCTTTGTCTCTCTAATT+AGG | + | chr3.1:38108966-38108985 | MS.gene82699:intron | 30.0% | |
| TAAATGCTGCTAAAAGAACA+GGG | - | chr3.1:38111320-38111339 | None:intergenic | 30.0% | |
| TAAGCAGATTCTTGTTAGAA+GGG | + | chr3.1:38109575-38109594 | MS.gene82699:intron | 30.0% | |
| TACTTATATCAACCACTTTG+TGG | + | chr3.1:38111062-38111081 | MS.gene82699:intron | 30.0% | |
| TATATGTAGCATCAACACTT+TGG | - | chr3.1:38112436-38112455 | None:intergenic | 30.0% | |
| TATTGTATCTGCTTTCTTCA+CGG | - | chr3.1:38110429-38110448 | None:intergenic | 30.0% | |
| TCCCTTCTATAATTGCAAAA+GGG | - | chr3.1:38112460-38112479 | None:intergenic | 30.0% | |
| TGATGCTATGGAAAATATAG+TGG | - | chr3.1:38111556-38111575 | None:intergenic | 30.0% | |
| TGCAGTGTTACAAGATATTA+CGG | - | chr3.1:38112614-38112633 | None:intergenic | 30.0% | |
| TTCCCTTCTATAATTGCAAA+AGG | - | chr3.1:38112461-38112480 | None:intergenic | 30.0% | |
| TTCCGCTATTTAAGCAATAA+CGG | - | chr3.1:38110504-38110523 | None:intergenic | 30.0% | |
| TTCCTATTAAAACAATGCAG+TGG | + | chr3.1:38112770-38112789 | MS.gene82699:intron | 30.0% | |
| TTGACACTAGATAAAACTAC+CGG | + | chr3.1:38110854-38110873 | MS.gene82699:intron | 30.0% | |
| ! | AACCCTTTTGCAATTATAGA+AGG | + | chr3.1:38112455-38112474 | MS.gene82699:intron | 30.0% |
| ! | ACCCTTTTGCAATTATAGAA+GGG | + | chr3.1:38112456-38112475 | MS.gene82699:intron | 30.0% |
| ! | AGAAGAAGAATAATTTGCAG+GGG | + | chr3.1:38109707-38109726 | MS.gene82699:intron | 30.0% |
| ! | AGCCAGAAATTTTGAATTGT+GGG | - | chr3.1:38112194-38112213 | None:intergenic | 30.0% |
| ! | GACTCTTGTCTTATTGTATT+TGG | + | chr3.1:38111378-38111397 | MS.gene82699:intron | 30.0% |
| ! | GTTTTGTCTTCACTACTATT+AGG | - | chr3.1:38110231-38110250 | None:intergenic | 30.0% |
| !! | AAATAGTCATCCTCTAGAAT+TGG | + | chr3.1:38112255-38112274 | MS.gene82699:intron | 30.0% |
| !! | AGTATTGATTCTATGACTTG+TGG | + | chr3.1:38111339-38111358 | MS.gene82699:intron | 30.0% |
| !!! | AACCACTGCATTGTTTTAAT+AGG | - | chr3.1:38112775-38112794 | None:intergenic | 30.0% |
| AATGAAGCAGAAGATGATAG+TGG | + | chr3.1:38108814-38108833 | MS.gene82699:CDS | 35.0% | |
| ACACTTCAAAAACCGAGTAT+CGG | - | chr3.1:38109300-38109319 | None:intergenic | 35.0% | |
| ACCATTCAATCTCAATCCAA+CGG | - | chr3.1:38109838-38109857 | None:intergenic | 35.0% | |
| ACTATGACTCATCACCAAAA+TGG | - | chr3.1:38111434-38111453 | None:intergenic | 35.0% | |
| AGAGTTGTTTGTGATGTTTG+TGG | + | chr3.1:38108905-38108924 | MS.gene82699:CDS | 35.0% | |
| AGTTCAGCACAACTAATAAC+CGG | - | chr3.1:38110876-38110895 | None:intergenic | 35.0% | |
| ATAACAGCACAACAGTTAGA+GGG | - | chr3.1:38112638-38112657 | None:intergenic | 35.0% | |
| ATATTGAGTCAGTGATGAGA+TGG | + | chr3.1:38110612-38110631 | MS.gene82699:intron | 35.0% | |
| ATGCCTTCAATATGAAGTGT+CGG | + | chr3.1:38109236-38109255 | MS.gene82699:intron | 35.0% | |
| ATGGAAACCAATTACTGAGA+GGG | - | chr3.1:38110193-38110212 | None:intergenic | 35.0% | |
| ATTCACGTAGCTAGATACAT+CGG | + | chr3.1:38109809-38109828 | MS.gene82699:intron | 35.0% | |
| ATTGATTGTGTTGTCGATGA+TGG | + | chr3.1:38108838-38108857 | MS.gene82699:CDS | 35.0% | |
| CAAAAAGTAACACCGATACT+CGG | + | chr3.1:38109285-38109304 | MS.gene82699:intron | 35.0% | |
| CAAATCCGTTGTTTACTTAC+AGG | - | chr3.1:38109763-38109782 | None:intergenic | 35.0% | |
| CAGAATTGCTGCATTTGTAA+AGG | - | chr3.1:38109658-38109677 | None:intergenic | 35.0% | |
| CTAAATGCTGCTAAAAGAAC+AGG | - | chr3.1:38111321-38111340 | None:intergenic | 35.0% | |
| GCAGTGTTACAAGATATTAC+GGG | - | chr3.1:38112613-38112632 | None:intergenic | 35.0% | |
| GCATCAACACTTTGGATTAA+AGG | - | chr3.1:38112428-38112447 | None:intergenic | 35.0% | |
| GCATCCAACACAAACTTAAT+TGG | - | chr3.1:38109220-38109239 | None:intergenic | 35.0% | |
| GTTCTTGCAATCCACTTTAT+GGG | + | chr3.1:38109619-38109638 | MS.gene82699:intron | 35.0% | |
| TAAAAACAGTTCAGCTCACA+TGG | - | chr3.1:38110573-38110592 | None:intergenic | 35.0% | |
| TAACATACTCTCTAGCAAAC+AGG | - | chr3.1:38110266-38110285 | None:intergenic | 35.0% | |
| TACACAAAATCCTTCCACTT+GGG | + | chr3.1:38110051-38110070 | MS.gene82699:intron | 35.0% | |
| TACTTAACAACACTGAACCA+AGG | - | chr3.1:38110359-38110378 | None:intergenic | 35.0% | |
| TATGGAAACCAATTACTGAG+AGG | - | chr3.1:38110194-38110213 | None:intergenic | 35.0% | |
| TATTGAGTCAGTGATGAGAT+GGG | + | chr3.1:38110613-38110632 | MS.gene82699:intron | 35.0% | |
| TGCTATGGAAAATATAGTGG+GGG | - | chr3.1:38111553-38111572 | None:intergenic | 35.0% | |
| TGTTAGAGATCAGCAAATGA+AGG | - | chr3.1:38110112-38110131 | None:intergenic | 35.0% | |
| TGTTATGAAGGAAAAGAGGA+AGG | + | chr3.1:38112652-38112671 | MS.gene82699:intron | 35.0% | |
| TGTTCTTGCAATCCACTTTA+TGG | + | chr3.1:38109618-38109637 | MS.gene82699:intron | 35.0% | |
| TTAAACAATGATACCAGTGG+CGG | + | chr3.1:38111498-38111517 | MS.gene82699:intron | 35.0% | |
| TTACACAAAATCCTTCCACT+TGG | + | chr3.1:38110050-38110069 | MS.gene82699:intron | 35.0% | |
| TTATGTTATTATGACGTCGC+TGG | + | chr3.1:38109335-38109354 | MS.gene82699:intron | 35.0% | |
| TTCAGTTACAATCATCCATC+GGG | + | chr3.1:38113010-38113029 | MS.gene82699:CDS | 35.0% | |
| TTCTTGCAATCCACTTTATG+GGG | + | chr3.1:38109620-38109639 | MS.gene82699:intron | 35.0% | |
| TTGCAATTATAGAAGGGAAG+AGG | + | chr3.1:38112462-38112481 | MS.gene82699:intron | 35.0% | |
| TTTAGAGGTCGATGTCAATT+TGG | - | chr3.1:38112060-38112079 | None:intergenic | 35.0% | |
| ! | AAGAAGAATAATTTGCAGGG+GGG | + | chr3.1:38109709-38109728 | MS.gene82699:intron | 35.0% |
| ! | AATGTTTGTTTAGTGCTGAG+AGG | - | chr3.1:38110680-38110699 | None:intergenic | 35.0% |
| ! | CCAGAAATTTTGAATTGTGG+GGG | - | chr3.1:38112192-38112211 | None:intergenic | 35.0% |
| ! | CTCAGTAATTGGTTTCCATA+CGG | + | chr3.1:38110194-38110213 | MS.gene82699:intron | 35.0% |
| ! | CTGATAATTTAGAACTTCGC+CGG | - | chr3.1:38112849-38112868 | None:intergenic | 35.0% |
| ! | CTGTAAGTAAACAACGGATT+TGG | + | chr3.1:38109761-38109780 | MS.gene82699:intron | 35.0% |
| ! | CTTTGGATTAAAGGTGTGTT+CGG | - | chr3.1:38112419-38112438 | None:intergenic | 35.0% |
| ! | GAAGAAGAATAATTTGCAGG+GGG | + | chr3.1:38109708-38109727 | MS.gene82699:intron | 35.0% |
| ! | GAGCCAGAAATTTTGAATTG+TGG | - | chr3.1:38112195-38112214 | None:intergenic | 35.0% |
| ! | GCCAGAAATTTTGAATTGTG+GGG | - | chr3.1:38112193-38112212 | None:intergenic | 35.0% |
| ! | GTAGGCATTGTTTGTGAATT+TGG | - | chr3.1:38109996-38110015 | None:intergenic | 35.0% |
| ! | GTTCAGTGTTGTTAAGTAAC+CGG | + | chr3.1:38110361-38110380 | MS.gene82699:intron | 35.0% |
| ! | TAACTGTTGTGCTGTTATGA+AGG | + | chr3.1:38112640-38112659 | MS.gene82699:intron | 35.0% |
| ! | TCCTTTGTTGTATCATTCAG+TGG | - | chr3.1:38112220-38112239 | None:intergenic | 35.0% |
| ! | TTTGTTGTATCATTCAGTGG+CGG | - | chr3.1:38112217-38112236 | None:intergenic | 35.0% |
| !! | ATTGACAGGTTGGTAAACAA+AGG | - | chr3.1:38113056-38113075 | None:intergenic | 35.0% |
| !! | CAGCTCACATGGTATTTTTA+AGG | - | chr3.1:38110562-38110581 | None:intergenic | 35.0% |
| !! | GTGTGATTAATAACGGATCA+CGG | - | chr3.1:38111124-38111143 | None:intergenic | 35.0% |
| !!! | CACTGAACCAAGGTTTTAAA+AGG | - | chr3.1:38110349-38110368 | None:intergenic | 35.0% |
| !!! | GTGTTTGTTTTGAGTGTAAG+TGG | + | chr3.1:38108860-38108879 | MS.gene82699:CDS | 35.0% |
| !!! | TTGTTTTGAGTGTAAGTGGT+TGG | + | chr3.1:38108864-38108883 | MS.gene82699:CDS | 35.0% |
| ACAATGCCTACCTCATCATT+CGG | + | chr3.1:38110005-38110024 | MS.gene82699:intron | 40.0% | |
| ACACAAAATCCTTCCACTTG+GGG | + | chr3.1:38110052-38110071 | MS.gene82699:intron | 40.0% | |
| ACACCGACACTTCATATTGA+AGG | - | chr3.1:38109242-38109261 | None:intergenic | 40.0% | |
| AGCCACGTATATGTCTTTGT+GGG | + | chr3.1:38111521-38111540 | MS.gene82699:intron | 40.0% | |
| AGGCATTTACAGATGCTAAG+GGG | + | chr3.1:38112867-38112886 | MS.gene82699:CDS | 40.0% | |
| ATGTTGGAACATTGACAGGT+TGG | - | chr3.1:38113066-38113085 | None:intergenic | 40.0% | |
| ATTCACTCACTCAGCTACAT+CGG | - | chr3.1:38109947-38109966 | None:intergenic | 40.0% | |
| ATTGAGTCAGTGATGAGATG+GGG | + | chr3.1:38110614-38110633 | MS.gene82699:intron | 40.0% | |
| CAACAAAGGACAAGTGAATG+TGG | + | chr3.1:38112230-38112249 | MS.gene82699:intron | 40.0% | |
| CAGGCATTTACAGATGCTAA+GGG | + | chr3.1:38112866-38112885 | MS.gene82699:CDS | 40.0% | |
| CAGTATGTTGGAACATTGAC+AGG | - | chr3.1:38113070-38113089 | None:intergenic | 40.0% | |
| CATAACAGCACAACAGTTAG+AGG | - | chr3.1:38112639-38112658 | None:intergenic | 40.0% | |
| CCCCCACAATTCAAAATTTC+TGG | + | chr3.1:38112189-38112208 | MS.gene82699:intron | 40.0% | |
| CCTCAGAATCAATGTCTTGA+AGG | - | chr3.1:38110740-38110759 | None:intergenic | 40.0% | |
| CCTGAAGATCATGTTCTTGA+AGG | + | chr3.1:38108944-38108963 | MS.gene82699:CDS | 40.0% | |
| CCTTCAAGAACATGATCTTC+AGG | - | chr3.1:38108947-38108966 | None:intergenic | 40.0% | |
| CTATGCTGCTGTTACATATC+GGG | + | chr3.1:38110392-38110411 | MS.gene82699:intron | 40.0% | |
| GATATGTAACAGCAGCATAG+CGG | - | chr3.1:38110392-38110411 | None:intergenic | 40.0% | |
| GCATTGAGACATTGCATCAA+AGG | - | chr3.1:38111291-38111310 | None:intergenic | 40.0% | |
| GCCACTGAATGATACAACAA+AGG | + | chr3.1:38112216-38112235 | MS.gene82699:intron | 40.0% | |
| GCTATGCTGCTGTTACATAT+CGG | + | chr3.1:38110391-38110410 | MS.gene82699:intron | 40.0% | |
| GGATTGAGATTGAATGGTGT+AGG | + | chr3.1:38109840-38109859 | MS.gene82699:intron | 40.0% | |
| GTTCTTTGCATAACCAAGTC+CGG | + | chr3.1:38112827-38112846 | MS.gene82699:CDS | 40.0% | |
| GTTTGTGGTGATTCTTCTCT+TGG | + | chr3.1:38108920-38108939 | MS.gene82699:CDS | 40.0% | |
| TAACTGATCCAACCCTTCAT+AGG | - | chr3.1:38112532-38112551 | None:intergenic | 40.0% | |
| TATTACCGGTGTTTACGTGT+CGG | - | chr3.1:38109167-38109186 | None:intergenic | 40.0% | |
| TCAGGCATTTACAGATGCTA+AGG | + | chr3.1:38112865-38112884 | MS.gene82699:CDS | 40.0% | |
| TCAGTTACAATCATCCATCG+GGG | + | chr3.1:38113011-38113030 | MS.gene82699:CDS | 40.0% | |
| TGAAAACAACTAACCCCAAG+TGG | - | chr3.1:38110068-38110087 | None:intergenic | 40.0% | |
| TGAAACAGAGGGAATGTGAT+TGG | - | chr3.1:38110148-38110167 | None:intergenic | 40.0% | |
| TGCTCATGGAAACTACTGAT+TGG | - | chr3.1:38112953-38112972 | None:intergenic | 40.0% | |
| TGCTGTTACATATCGGGATT+TGG | + | chr3.1:38110398-38110417 | MS.gene82699:intron | 40.0% | |
| TGTAACCACATGTGTTGTGT+TGG | + | chr3.1:38112367-38112386 | MS.gene82699:intron | 40.0% | |
| TGTATAGCTGTTGCTGTAGT+GGG | + | chr3.1:38112504-38112523 | MS.gene82699:intron | 40.0% | |
| TGTATCTAGCTACGTGAATG+TGG | - | chr3.1:38109808-38109827 | None:intergenic | 40.0% | |
| TGTTTGACACGTGTTAGAGT+CGG | - | chr3.1:38112396-38112415 | None:intergenic | 40.0% | |
| TTTGGATACCTTGCAATCAC+AGG | + | chr3.1:38109779-38109798 | MS.gene82699:intron | 40.0% | |
| ! | AAATAGCGGAAACCACAAAG+TGG | - | chr3.1:38111077-38111096 | None:intergenic | 40.0% |
| ! | ATCCTCATTTTGCGATAGTG+AGG | - | chr3.1:38110790-38110809 | None:intergenic | 40.0% |
| ! | GTGCTGTTATGAAGGAAAAG+AGG | + | chr3.1:38112648-38112667 | MS.gene82699:intron | 40.0% |
| ! | GTGGATTGCAAGAACATTAG+AGG | - | chr3.1:38109614-38109633 | None:intergenic | 40.0% |
| ! | TAACGGATCACGGAAAATAG+CGG | - | chr3.1:38111114-38111133 | None:intergenic | 40.0% |
| !! | CCTTCAAGACATTGATTCTG+AGG | + | chr3.1:38110737-38110756 | MS.gene82699:intron | 40.0% |
| !! | CGGCGAAGTTCTAAATTATC+AGG | + | chr3.1:38112847-38112866 | MS.gene82699:CDS | 40.0% |
| !! | TGAAGCATTGACATAGACAC+AGG | + | chr3.1:38112289-38112308 | MS.gene82699:intron | 40.0% |
| !!! | CGGTTTTTGAAGTGTTAGCT+GGG | + | chr3.1:38109305-38109324 | MS.gene82699:intron | 40.0% |
| !!! | TCGGTTTTTGAAGTGTTAGC+TGG | + | chr3.1:38109304-38109323 | MS.gene82699:intron | 40.0% |
| AACAACTAACCCCAAGTGGA+AGG | - | chr3.1:38110064-38110083 | None:intergenic | 45.0% | |
| AATGCCTGAGAGTGATCGTT+GGG | + | chr3.1:38112910-38112929 | MS.gene82699:CDS | 45.0% | |
| AGCAACAGCTATACAGTACC+AGG | - | chr3.1:38112499-38112518 | None:intergenic | 45.0% | |
| AGCCCACAAAGACATATACG+TGG | - | chr3.1:38111526-38111545 | None:intergenic | 45.0% | |
| CAAATGCAGCAATTCTGCAG+AGG | + | chr3.1:38109661-38109680 | MS.gene82699:intron | 45.0% | |
| CACTGCTATTGCAGTGATAG+CGG | - | chr3.1:38110460-38110479 | None:intergenic | 45.0% | |
| CTGTATAGCTGTTGCTGTAG+TGG | + | chr3.1:38112503-38112522 | MS.gene82699:intron | 45.0% | |
| GAATACCGACACGTAAACAC+CGG | + | chr3.1:38109159-38109178 | MS.gene82699:intron | 45.0% | |
| GACAAGACAGCTGAAACAGA+GGG | - | chr3.1:38110159-38110178 | None:intergenic | 45.0% | |
| GAGCCACGTATATGTCTTTG+TGG | + | chr3.1:38111520-38111539 | MS.gene82699:intron | 45.0% | |
| GCCGTTGGATTGAGATTGAA+TGG | + | chr3.1:38109834-38109853 | MS.gene82699:intron | 45.0% | |
| TGCCTCACTATCGCAAAATG+AGG | + | chr3.1:38110785-38110804 | MS.gene82699:intron | 45.0% | |
| TGTAGCTGAGTGAGTGAATG+CGG | + | chr3.1:38109948-38109967 | MS.gene82699:intron | 45.0% | |
| TGTGGAAACCTGTGATTGCA+AGG | - | chr3.1:38109790-38109809 | None:intergenic | 45.0% | |
| TTATAGAAGGGAAGAGGCAG+CGG | + | chr3.1:38112468-38112487 | MS.gene82699:intron | 45.0% | |
| TTGAGTGTAAGTGGTTGGAC+TGG | + | chr3.1:38108869-38108888 | MS.gene82699:CDS | 45.0% | |
| ! | ATTTAGAACTTCGCCGGACT+TGG | - | chr3.1:38112843-38112862 | None:intergenic | 45.0% |
| ! | CTGTAGTGGGATCCTATGAA+GGG | + | chr3.1:38112517-38112536 | MS.gene82699:intron | 45.0% |
| ! | GGGAGAGTACAGAATCTAGA+AGG | + | chr3.1:38109729-38109748 | MS.gene82699:intron | 45.0% |
| !! | AAAATAGCGGATAGCGTAGC+GGG | - | chr3.1:38111101-38111120 | None:intergenic | 45.0% |
| !! | GAAAATAGCGGATAGCGTAG+CGG | - | chr3.1:38111102-38111121 | None:intergenic | 45.0% |
| ACAGCATGTGAATACCCCGA+TGG | - | chr3.1:38113028-38113047 | None:intergenic | 50.0% | |
| AGTGGGATCCTATGAAGGGT+TGG | + | chr3.1:38112521-38112540 | MS.gene82699:intron | 50.0% | |
| CAATGCCTGAGAGTGATCGT+TGG | + | chr3.1:38112909-38112928 | MS.gene82699:CDS | 50.0% | |
| CAGCTGTCTTGTCCTTGTGT+GGG | + | chr3.1:38110166-38110185 | MS.gene82699:intron | 50.0% | |
| CTAGATACATCGGTAGCCGT+TGG | + | chr3.1:38109819-38109838 | MS.gene82699:intron | 50.0% | |
| GGACAAGACAGCTGAAACAG+AGG | - | chr3.1:38110160-38110179 | None:intergenic | 50.0% | |
| GGACACCAACACAACACATG+TGG | - | chr3.1:38112375-38112394 | None:intergenic | 50.0% | |
| GTAGCTGAGTGAGTGAATGC+GGG | + | chr3.1:38109949-38109968 | MS.gene82699:intron | 50.0% | |
| TACCTAGCTCGTGGGGTTTA+GGG | - | chr3.1:38110656-38110675 | None:intergenic | 50.0% | |
| TATAGAAGGGAAGAGGCAGC+GGG | + | chr3.1:38112469-38112488 | MS.gene82699:intron | 50.0% | |
| TCAGCTACATCGGTGAGTGT+TGG | - | chr3.1:38109937-38109956 | None:intergenic | 50.0% | |
| TCAGCTGTCTTGTCCTTGTG+TGG | + | chr3.1:38110165-38110184 | MS.gene82699:intron | 50.0% | |
| TGAGAGGTTACCTAGCTCGT+GGG | - | chr3.1:38110664-38110683 | None:intergenic | 50.0% | |
| TGGTTTCCATACGGTCGTTC+AGG | + | chr3.1:38110203-38110222 | MS.gene82699:intron | 50.0% | |
| TGTGGGACCCTCTCAGTAAT+TGG | + | chr3.1:38110183-38110202 | MS.gene82699:intron | 50.0% | |
| TTACCTAGCTCGTGGGGTTT+AGG | - | chr3.1:38110657-38110676 | None:intergenic | 50.0% | |
| TTTGGATTCCCTGCAGTTGC+AGG | - | chr3.1:38109978-38109997 | None:intergenic | 50.0% | |
| ! | GCTGTAGTGGGATCCTATGA+AGG | + | chr3.1:38112516-38112535 | MS.gene82699:intron | 50.0% |
| !! | ATAGCGTAGCGGGCAAATAG+CGG | - | chr3.1:38111091-38111110 | None:intergenic | 50.0% |
| !! | GGTGAGTGTTGGATCGAGAT+TGG | - | chr3.1:38109926-38109945 | None:intergenic | 50.0% |
| !! | GGTTGGACTGGTGAAATTCG+TGG | + | chr3.1:38108881-38108900 | MS.gene82699:CDS | 50.0% |
| !! | TCGTCTTGGTGGTGGTAGTT+CGG | + | chr3.1:38112979-38112998 | MS.gene82699:CDS | 50.0% |
| ACCTAGCTCGTGGGGTTTAG+GGG | - | chr3.1:38110655-38110674 | None:intergenic | 55.0% | |
| AGAGAGGGAGCCGAATGATG+AGG | - | chr3.1:38110018-38110037 | None:intergenic | 55.0% | |
| AGGGAGCCGAATGATGAGGT+AGG | - | chr3.1:38110014-38110033 | None:intergenic | 55.0% | |
| ATAGAAGGGAAGAGGCAGCG+GGG | + | chr3.1:38112470-38112489 | MS.gene82699:intron | 55.0% | |
| CAAGACGAGTGCAGTGCTCA+TGG | - | chr3.1:38112967-38112986 | None:intergenic | 55.0% | |
| CTGAGAGGTTACCTAGCTCG+TGG | - | chr3.1:38110665-38110684 | None:intergenic | 55.0% | |
| GAGAGGTTACCTAGCTCGTG+GGG | - | chr3.1:38110663-38110682 | None:intergenic | 55.0% | |
| GCATCCCAACGATCACTCTC+AGG | - | chr3.1:38112917-38112936 | None:intergenic | 55.0% | |
| TACTGAGAGGGTCCCACACA+AGG | - | chr3.1:38110181-38110200 | None:intergenic | 55.0% | |
| TAGGCACCTGAACGACCGTA+TGG | - | chr3.1:38110212-38110231 | None:intergenic | 55.0% | |
| ! | CATGAGCACTGCACTCGTCT+TGG | + | chr3.1:38112965-38112984 | MS.gene82699:CDS | 55.0% |
| !! | CGTCTTGGTGGTGGTAGTTC+GGG | + | chr3.1:38112980-38112999 | MS.gene82699:CDS | 55.0% |
| !! | GTCTTGGTGGTGGTAGTTCG+GGG | + | chr3.1:38112981-38113000 | MS.gene82699:CDS | 55.0% |
| ACCCCTAAACCCCACGAGCT+AGG | + | chr3.1:38110651-38110670 | MS.gene82699:intron | 60.0% | |
| CACTGCACTCGTCTTGGTGG+TGG | + | chr3.1:38112971-38112990 | MS.gene82699:CDS | 60.0% | |
| CATATACGTGGCTCCGCCAC+TGG | - | chr3.1:38111514-38111533 | None:intergenic | 60.0% | |
| GCGGGAAACCTGCAACTGCA+GGG | + | chr3.1:38109967-38109986 | MS.gene82699:intron | 60.0% | |
| TAGAAGGGAAGAGGCAGCGG+GGG | + | chr3.1:38112471-38112490 | MS.gene82699:intron | 60.0% | |
| TGCGGGAAACCTGCAACTGC+AGG | + | chr3.1:38109966-38109985 | MS.gene82699:intron | 60.0% | |
| ! | GAGCACTGCACTCGTCTTGG+TGG | + | chr3.1:38112968-38112987 | MS.gene82699:CDS | 60.0% |
| !! | CAGCAGCATAGCGGTGCTAC+CGG | - | chr3.1:38110383-38110402 | None:intergenic | 60.0% |
| GAAGAGGCAGCGGGGGAACC+TGG | + | chr3.1:38112478-38112497 | MS.gene82699:intron | 70.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr3.1 | gene | 38108806 | 38113096 | 38108806 | ID=MS.gene82699 |
| chr3.1 | mRNA | 38108806 | 38113096 | 38108806 | ID=MS.gene82699.t1;Parent=MS.gene82699 |
| chr3.1 | exon | 38108806 | 38108965 | 38108806 | ID=MS.gene82699.t1.exon1;Parent=MS.gene82699.t1 |
| chr3.1 | CDS | 38108806 | 38108965 | 38108806 | ID=cds.MS.gene82699.t1;Parent=MS.gene82699.t1 |
| chr3.1 | exon | 38112813 | 38113096 | 38112813 | ID=MS.gene82699.t1.exon2;Parent=MS.gene82699.t1 |
| chr3.1 | CDS | 38112813 | 38113096 | 38112813 | ID=cds.MS.gene82699.t1;Parent=MS.gene82699.t1 |
| Gene Sequence |
| Protein sequence |
