Alfalfa Gene Editing Database
Nr:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene82869.t1 | XP_003618180.2 | 97.9 | 338 | 6 | 1 | 1 | 338 | 87 | 423 | 1.80E-175 | 625.2 |
Swissprot:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene82869.t1 | P52178 | 68.6 | 328 | 95 | 2 | 8 | 335 | 82 | 401 | 1.4e-120 | 434.1 |
Trembl:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene82869.t1 | G7KHI6 | 97.9 | 338 | 6 | 1 | 1 | 338 | 82 | 418 | 1.3e-175 | 625.2 |
TFs/TRs:
Gene ID | Type | Classification |
---|
Protein Kinases:
Gene ID | Type | Classification |
---|
Network:
Co-expression Network:
Gene1 | Gene2 | correlation coefficient | p_value | FDR |
---|---|---|---|---|
MS.gene049217 | MS.gene82869 | 0.823464 | 1.37E-53 | -1.69E-46 |
MS.gene049222 | MS.gene82869 | 0.824852 | 6.45E-54 | -1.69E-46 |
MS.gene049232 | MS.gene82869 | 0.880107 | 7.21E-70 | -1.69E-46 |
MS.gene049285 | MS.gene82869 | 0.832651 | 8.37E-56 | -1.69E-46 |
MS.gene049320 | MS.gene82869 | 0.854466 | 1.21E-61 | -1.69E-46 |
MS.gene049396 | MS.gene82869 | 0.848298 | 6.70E-60 | -1.69E-46 |
MS.gene049552 | MS.gene82869 | 0.822428 | 2.38E-53 | -1.69E-46 |
MS.gene049600 | MS.gene82869 | 0.804587 | 2.01E-49 | -1.69E-46 |
MS.gene049609 | MS.gene82869 | 0.82827 | 9.87E-55 | -1.69E-46 |
MS.gene05010 | MS.gene82869 | 0.854499 | 1.18E-61 | -1.69E-46 |
MS.gene050216 | MS.gene82869 | 0.856875 | 2.39E-62 | -1.69E-46 |
MS.gene050323 | MS.gene82869 | 0.840518 | 8.29E-58 | -1.69E-46 |
MS.gene050380 | MS.gene82869 | -0.840283 | 9.54E-58 | -1.69E-46 |
MS.gene050381 | MS.gene82869 | -0.843787 | 1.13E-58 | -1.69E-46 |
MS.gene050496 | MS.gene82869 | 0.825913 | 3.62E-54 | -1.69E-46 |
MS.gene050499 | MS.gene82869 | 0.83162 | 1.51E-55 | -1.69E-46 |
MS.gene050502 | MS.gene82869 | 0.8605 | 1.98E-63 | -1.69E-46 |
MS.gene050504 | MS.gene82869 | 0.837899 | 3.96E-57 | -1.69E-46 |
MS.gene050518 | MS.gene82869 | 0.817827 | 2.69E-52 | -1.69E-46 |
MS.gene050520 | MS.gene82869 | 0.828495 | 8.71E-55 | -1.69E-46 |
MS.gene050593 | MS.gene82869 | 0.806654 | 7.40E-50 | -1.69E-46 |
MS.gene050612 | MS.gene82869 | 0.81323 | 2.84E-51 | -1.69E-46 |
MS.gene050662 | MS.gene82869 | 0.840957 | 6.36E-58 | -1.69E-46 |
MS.gene050675 | MS.gene82869 | 0.83031 | 3.16E-55 | -1.69E-46 |
MS.gene050686 | MS.gene82869 | 0.833964 | 3.94E-56 | -1.69E-46 |
MS.gene050699 | MS.gene82869 | 0.81783 | 2.69E-52 | -1.69E-46 |
MS.gene050747 | MS.gene82869 | 0.819295 | 1.25E-52 | -1.69E-46 |
MS.gene050772 | MS.gene82869 | 0.862348 | 5.40E-64 | -1.69E-46 |
MS.gene05080 | MS.gene82869 | 0.801153 | 1.03E-48 | -1.69E-46 |
MS.gene050868 | MS.gene82869 | 0.838497 | 2.78E-57 | -1.69E-46 |
MS.gene050871 | MS.gene82869 | 0.840109 | 1.06E-57 | -1.69E-46 |
MS.gene050883 | MS.gene82869 | -0.808803 | 2.59E-50 | -1.69E-46 |
MS.gene050950 | MS.gene82869 | 0.813059 | 3.10E-51 | -1.69E-46 |
MS.gene050986 | MS.gene82869 | 0.832401 | 9.65E-56 | -1.69E-46 |
MS.gene051113 | MS.gene82869 | -0.803144 | 4.01E-49 | -1.69E-46 |
MS.gene051127 | MS.gene82869 | -0.812209 | 4.76E-51 | -1.69E-46 |
MS.gene051509 | MS.gene82869 | 0.863885 | 1.81E-64 | -1.69E-46 |
MS.gene051551 | MS.gene82869 | 0.846703 | 1.84E-59 | -1.69E-46 |
MS.gene051858 | MS.gene82869 | 0.809969 | 1.45E-50 | -1.69E-46 |
MS.gene052164 | MS.gene82869 | 0.823284 | 1.50E-53 | -1.69E-46 |
MS.gene052482 | MS.gene82869 | 0.809722 | 1.64E-50 | -1.69E-46 |
MS.gene052486 | MS.gene82869 | 0.81488 | 1.23E-51 | -1.69E-46 |
MS.gene052503 | MS.gene82869 | 0.811835 | 5.74E-51 | -1.69E-46 |
MS.gene052506 | MS.gene82869 | 0.824903 | 6.27E-54 | -1.69E-46 |
MS.gene052615 | MS.gene82869 | 0.806803 | 6.89E-50 | -1.69E-46 |
MS.gene052822 | MS.gene82869 | 0.829737 | 4.35E-55 | -1.69E-46 |
MS.gene052823 | MS.gene82869 | 0.80686 | 6.70E-50 | -1.69E-46 |
MS.gene052916 | MS.gene82869 | 0.853171 | 2.85E-61 | -1.69E-46 |
MS.gene053018 | MS.gene82869 | 0.933872 | 9.66E-96 | -1.69E-46 |
MS.gene053203 | MS.gene82869 | 0.827372 | 1.62E-54 | -1.69E-46 |
MS.gene053213 | MS.gene82869 | 0.860249 | 2.36E-63 | -1.69E-46 |
MS.gene053286 | MS.gene82869 | 0.858232 | 9.49E-63 | -1.69E-46 |
MS.gene053420 | MS.gene82869 | -0.823193 | 1.58E-53 | -1.69E-46 |
MS.gene053436 | MS.gene82869 | 0.86064 | 1.79E-63 | -1.69E-46 |
MS.gene053505 | MS.gene82869 | 0.831457 | 1.65E-55 | -1.69E-46 |
MS.gene053561 | MS.gene82869 | -0.802748 | 4.84E-49 | -1.69E-46 |
MS.gene053574 | MS.gene82869 | 0.882217 | 1.25E-70 | -1.69E-46 |
MS.gene053626 | MS.gene82869 | 0.843316 | 1.51E-58 | -1.69E-46 |
MS.gene053633 | MS.gene82869 | 0.810026 | 1.41E-50 | -1.69E-46 |
MS.gene053813 | MS.gene82869 | 0.801132 | 1.04E-48 | -1.69E-46 |
MS.gene053824 | MS.gene82869 | 0.801177 | 1.02E-48 | -1.69E-46 |
MS.gene053916 | MS.gene82869 | 0.81318 | 2.92E-51 | -1.69E-46 |
MS.gene054003 | MS.gene82869 | 0.841521 | 4.52E-58 | -1.69E-46 |
MS.gene054595 | MS.gene82869 | 0.841843 | 3.72E-58 | -1.69E-46 |
MS.gene054642 | MS.gene82869 | 0.83473 | 2.53E-56 | -1.69E-46 |
MS.gene054954 | MS.gene82869 | 0.838963 | 2.10E-57 | -1.69E-46 |
MS.gene05505 | MS.gene82869 | 0.82714 | 1.84E-54 | -1.69E-46 |
MS.gene055154 | MS.gene82869 | -0.837998 | 3.73E-57 | -1.69E-46 |
MS.gene055362 | MS.gene82869 | 0.838864 | 2.23E-57 | -1.69E-46 |
MS.gene055502 | MS.gene82869 | 0.83166 | 1.47E-55 | -1.69E-46 |
MS.gene055577 | MS.gene82869 | 0.813732 | 2.21E-51 | -1.69E-46 |
MS.gene055722 | MS.gene82869 | 0.859438 | 4.14E-63 | -1.69E-46 |
MS.gene055909 | MS.gene82869 | 0.805187 | 1.51E-49 | -1.69E-46 |
MS.gene055911 | MS.gene82869 | 0.800853 | 1.19E-48 | -1.69E-46 |
MS.gene055941 | MS.gene82869 | 0.805876 | 1.08E-49 | -1.69E-46 |
MS.gene056046 | MS.gene82869 | 0.828807 | 7.32E-55 | -1.69E-46 |
MS.gene056166 | MS.gene82869 | 0.805362 | 1.38E-49 | -1.69E-46 |
MS.gene056374 | MS.gene82869 | 0.814409 | 1.56E-51 | -1.69E-46 |
MS.gene056422 | MS.gene82869 | 0.848686 | 5.23E-60 | -1.69E-46 |
MS.gene056448 | MS.gene82869 | 0.854251 | 1.39E-61 | -1.69E-46 |
MS.gene056487 | MS.gene82869 | 0.810859 | 9.35E-51 | -1.69E-46 |
MS.gene056504 | MS.gene82869 | 0.856648 | 2.79E-62 | -1.69E-46 |
MS.gene056510 | MS.gene82869 | 0.822986 | 1.77E-53 | -1.69E-46 |
MS.gene056657 | MS.gene82869 | 0.859365 | 4.35E-63 | -1.69E-46 |
MS.gene056878 | MS.gene82869 | 0.842828 | 2.04E-58 | -1.69E-46 |
MS.gene056942 | MS.gene82869 | 0.832051 | 1.18E-55 | -1.69E-46 |
MS.gene057086 | MS.gene82869 | 0.833376 | 5.53E-56 | -1.69E-46 |
MS.gene057331 | MS.gene82869 | 0.810166 | 1.32E-50 | -1.69E-46 |
MS.gene057416 | MS.gene82869 | 0.823223 | 1.55E-53 | -1.69E-46 |
MS.gene057734 | MS.gene82869 | 0.806884 | 6.62E-50 | -1.69E-46 |
MS.gene05787 | MS.gene82869 | 0.810698 | 1.01E-50 | -1.69E-46 |
MS.gene057926 | MS.gene82869 | 0.823971 | 1.04E-53 | -1.69E-46 |
MS.gene058157 | MS.gene82869 | 0.817657 | 2.94E-52 | -1.69E-46 |
MS.gene058183 | MS.gene82869 | 0.833686 | 4.62E-56 | -1.69E-46 |
MS.gene05837 | MS.gene82869 | 0.813556 | 2.41E-51 | -1.69E-46 |
MS.gene058419 | MS.gene82869 | 0.828741 | 7.60E-55 | -1.69E-46 |
MS.gene058459 | MS.gene82869 | 0.822028 | 2.95E-53 | -1.69E-46 |
MS.gene058773 | MS.gene82869 | 0.815801 | 7.67E-52 | -1.69E-46 |
MS.gene05883 | MS.gene82869 | 0.800056 | 1.72E-48 | -1.69E-46 |
MS.gene058840 | MS.gene82869 | -0.813691 | 2.25E-51 | -1.69E-46 |
MS.gene059022 | MS.gene82869 | 0.836026 | 1.19E-56 | -1.69E-46 |
MS.gene059034 | MS.gene82869 | 0.832265 | 1.04E-55 | -1.69E-46 |
MS.gene05913 | MS.gene82869 | 0.843396 | 1.44E-58 | -1.69E-46 |
MS.gene059367 | MS.gene82869 | 0.882482 | 1.00E-70 | -1.69E-46 |
MS.gene059368 | MS.gene82869 | 0.851114 | 1.10E-60 | -1.69E-46 |
MS.gene059677 | MS.gene82869 | 0.812598 | 3.91E-51 | -1.69E-46 |
MS.gene059680 | MS.gene82869 | 0.802217 | 6.23E-49 | -1.69E-46 |
MS.gene059711 | MS.gene82869 | 0.83265 | 8.37E-56 | -1.69E-46 |
MS.gene059718 | MS.gene82869 | 0.835881 | 1.30E-56 | -1.69E-46 |
MS.gene059865 | MS.gene82869 | 0.852847 | 3.53E-61 | -1.69E-46 |
MS.gene059902 | MS.gene82869 | 0.808649 | 2.79E-50 | -1.69E-46 |
MS.gene060482 | MS.gene82869 | 0.933795 | 1.09E-95 | -1.69E-46 |
MS.gene060703 | MS.gene82869 | 0.805098 | 1.57E-49 | -1.69E-46 |
MS.gene060778 | MS.gene82869 | 0.846614 | 1.94E-59 | -1.69E-46 |
MS.gene06077 | MS.gene82869 | 0.827342 | 1.65E-54 | -1.69E-46 |
MS.gene060804 | MS.gene82869 | 0.814443 | 1.54E-51 | -1.69E-46 |
MS.gene060835 | MS.gene82869 | 0.833421 | 5.38E-56 | -1.69E-46 |
MS.gene060837 | MS.gene82869 | 0.831114 | 2.00E-55 | -1.69E-46 |
MS.gene06097 | MS.gene82869 | 0.80841 | 3.14E-50 | -1.69E-46 |
MS.gene060982 | MS.gene82869 | 0.810694 | 1.01E-50 | -1.69E-46 |
MS.gene061134 | MS.gene82869 | 0.832291 | 1.03E-55 | -1.69E-46 |
PPI:
Gene1 | Gene2 | Type |
---|
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene82869.t1 | MTR_6g005480 | 97.929 | 338 | 6 | 1 | 1 | 338 | 82 | 418 | 0.0 | 664 |
MS.gene82869.t1 | MTR_4g105630 | 72.787 | 305 | 80 | 1 | 27 | 331 | 79 | 380 | 3.72e-163 | 461 |
MS.gene82869.t1 | MTR_3g077640 | 69.725 | 327 | 95 | 2 | 9 | 335 | 87 | 409 | 8.49e-159 | 451 |
MS.gene82869.t1 | MTR_4g105630 | 70.847 | 295 | 83 | 1 | 27 | 321 | 79 | 370 | 3.59e-152 | 432 |
MS.gene82869.t1 | MTR_4g105630 | 68.548 | 248 | 75 | 1 | 27 | 274 | 79 | 323 | 6.92e-122 | 355 |
MS.gene82869.t1 | MTR_4g105630 | 69.231 | 221 | 68 | 0 | 27 | 247 | 79 | 299 | 8.17e-109 | 321 |
MS.gene82869.t1 | MTR_2g022700 | 46.358 | 302 | 154 | 4 | 29 | 328 | 100 | 395 | 7.35e-77 | 241 |
MS.gene82869.t1 | MTR_3g049400 | 43.548 | 310 | 171 | 3 | 19 | 328 | 96 | 401 | 3.87e-75 | 237 |
MS.gene82869.t1 | MTR_2g029180 | 45.253 | 316 | 165 | 6 | 14 | 325 | 81 | 392 | 6.46e-73 | 231 |
MS.gene82869.t1 | MTR_4g088350 | 41.776 | 304 | 160 | 7 | 30 | 327 | 96 | 388 | 1.21e-68 | 220 |
MS.gene82869.t1 | MTR_4g131800 | 43.168 | 322 | 156 | 4 | 29 | 327 | 97 | 414 | 2.18e-65 | 223 |
MS.gene82869.t1 | MTR_5g044220 | 37.464 | 347 | 197 | 7 | 5 | 338 | 65 | 404 | 5.53e-63 | 206 |
MS.gene82869.t1 | MTR_4g088350 | 43.307 | 254 | 127 | 7 | 80 | 327 | 35 | 277 | 1.40e-57 | 188 |
MS.gene82869.t1 | MTR_4g018760 | 29.630 | 297 | 194 | 7 | 39 | 328 | 19 | 307 | 1.76e-24 | 101 |
MS.gene82869.t1 | MTR_3g072380 | 28.662 | 314 | 193 | 11 | 40 | 337 | 22 | 320 | 5.89e-24 | 100 |
MS.gene82869.t1 | MTR_1g030320 | 28.076 | 317 | 212 | 10 | 18 | 329 | 2 | 307 | 7.57e-23 | 97.8 |
MS.gene82869.t1 | MTR_8g090130 | 27.393 | 303 | 201 | 5 | 35 | 328 | 14 | 306 | 1.78e-21 | 93.2 |
MS.gene82869.t1 | MTR_3g462070 | 29.010 | 293 | 199 | 4 | 40 | 328 | 17 | 304 | 2.34e-20 | 90.1 |
MS.gene82869.t1 | MTR_3g070000 | 26.935 | 323 | 217 | 7 | 15 | 328 | 7 | 319 | 4.82e-20 | 89.7 |
MS.gene82869.t1 | MTR_5g081710 | 27.243 | 301 | 202 | 5 | 36 | 328 | 12 | 303 | 7.01e-18 | 83.2 |
MS.gene82869.t1 | MTR_3g072380 | 32.530 | 166 | 102 | 4 | 40 | 198 | 22 | 184 | 4.84e-16 | 76.6 |
MS.gene82869.t1 | MTR_4g101860 | 26.333 | 300 | 206 | 6 | 36 | 328 | 56 | 347 | 2.01e-15 | 76.6 |
MS.gene82869.t1 | MTR_4g114360 | 25.641 | 312 | 214 | 10 | 24 | 327 | 4 | 305 | 1.69e-12 | 67.8 |
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene82869.t1 | AT3G01550 | 68.358 | 335 | 101 | 4 | 2 | 334 | 50 | 381 | 2.76e-154 | 438 |
MS.gene82869.t1 | AT5G33320 | 66.766 | 334 | 105 | 4 | 2 | 335 | 80 | 407 | 1.19e-151 | 432 |
MS.gene82869.t1 | AT3G01550 | 67.164 | 335 | 100 | 5 | 2 | 334 | 50 | 376 | 1.08e-147 | 421 |
MS.gene82869.t1 | AT5G17630 | 44.648 | 327 | 175 | 5 | 6 | 330 | 84 | 406 | 3.22e-82 | 256 |
MS.gene82869.t1 | AT5G54800 | 43.344 | 323 | 175 | 4 | 8 | 327 | 70 | 387 | 5.26e-75 | 236 |
MS.gene82869.t1 | AT1G61800 | 45.033 | 302 | 158 | 4 | 29 | 328 | 93 | 388 | 7.42e-75 | 236 |
MS.gene82869.t1 | AT1G61800 | 44.371 | 302 | 160 | 4 | 29 | 328 | 93 | 388 | 4.31e-73 | 232 |
MS.gene82869.t1 | AT5G46110 | 38.700 | 323 | 185 | 8 | 10 | 327 | 83 | 397 | 1.40e-67 | 218 |
MS.gene82869.t1 | AT5G46110 | 38.700 | 323 | 185 | 8 | 10 | 327 | 83 | 397 | 1.82e-67 | 218 |
MS.gene82869.t1 | AT5G46110 | 40.550 | 291 | 162 | 7 | 40 | 327 | 2 | 284 | 3.17e-66 | 211 |
MS.gene82869.t1 | AT5G46110 | 37.461 | 323 | 178 | 9 | 10 | 327 | 83 | 386 | 1.89e-61 | 201 |
MS.gene82869.t1 | AT4G03950 | 30.592 | 304 | 141 | 11 | 33 | 330 | 18 | 257 | 2.54e-27 | 108 |
MS.gene82869.t1 | AT1G21870 | 28.383 | 303 | 188 | 9 | 40 | 329 | 22 | 308 | 6.98e-24 | 100 |
MS.gene82869.t1 | AT1G77610 | 28.814 | 295 | 197 | 9 | 40 | 329 | 16 | 302 | 5.43e-23 | 98.2 |
MS.gene82869.t1 | AT3G10290 | 25.545 | 321 | 228 | 5 | 13 | 328 | 38 | 352 | 8.93e-22 | 95.1 |
MS.gene82869.t1 | AT3G11320 | 29.338 | 317 | 204 | 7 | 17 | 328 | 4 | 305 | 1.30e-21 | 94.0 |
MS.gene82869.t1 | AT5G05820 | 29.560 | 318 | 204 | 7 | 16 | 328 | 3 | 305 | 1.60e-21 | 93.6 |
MS.gene82869.t1 | AT5G04160 | 26.885 | 305 | 212 | 6 | 29 | 328 | 8 | 306 | 3.12e-21 | 92.8 |
MS.gene82869.t1 | AT1G12500 | 28.667 | 300 | 199 | 6 | 36 | 328 | 62 | 353 | 3.35e-21 | 93.6 |
MS.gene82869.t1 | AT2G25520 | 26.959 | 319 | 211 | 9 | 19 | 327 | 3 | 309 | 1.84e-16 | 79.7 |
MS.gene82869.t1 | AT1G43310 | 75.556 | 45 | 11 | 0 | 147 | 191 | 43 | 87 | 4.05e-16 | 73.2 |
MS.gene82869.t1 | AT1G06470 | 24.611 | 321 | 215 | 8 | 35 | 337 | 77 | 388 | 1.23e-15 | 77.8 |
MS.gene82869.t1 | AT1G06470 | 24.611 | 321 | 215 | 8 | 35 | 337 | 77 | 388 | 1.23e-15 | 77.8 |
MS.gene82869.t1 | AT1G06470 | 24.611 | 321 | 215 | 8 | 35 | 337 | 77 | 388 | 1.23e-15 | 77.8 |
MS.gene82869.t1 | AT1G06470 | 24.611 | 321 | 215 | 8 | 35 | 337 | 77 | 388 | 1.23e-15 | 77.8 |
MS.gene82869.t1 | AT5G11230 | 26.332 | 319 | 213 | 9 | 19 | 327 | 3 | 309 | 4.47e-15 | 75.5 |
MS.gene82869.t1 | AT4G32390 | 26.183 | 317 | 216 | 9 | 19 | 327 | 3 | 309 | 2.52e-14 | 73.6 |
MS.gene82869.t1 | AT5G25400 | 25.532 | 329 | 223 | 9 | 19 | 338 | 3 | 318 | 3.67e-14 | 72.8 |
Find 67 sgRNAs with CRISPR-Local
Find 279 sgRNAs with CRISPR-GE
CRISPR-Local
sgRNA_sequence | on_target_score | Position | Region |
---|---|---|---|
ATGAACAGATGCCTACTTTA+TGG | 0.163343 | 6.1:+1434849 | MS.gene82869:intron |
TGTTCTTTCATCCCTTCTTT+TGG | 0.207239 | 6.1:+1434132 | MS.gene82869:CDS |
AATTATGCTTCCTTTGTCTT+TGG | 0.270898 | 6.1:-1437418 | None:intergenic |
GAAGGGAAACAACAAACTTC+TGG | 0.281220 | 6.1:+1432437 | MS.gene82869:CDS |
TCTTCTCTTCTACCTATAGT+TGG | 0.295688 | 6.1:+1434878 | MS.gene82869:CDS |
CTTCTCTTCTACCTATAGTT+GGG | 0.300468 | 6.1:+1434879 | MS.gene82869:CDS |
CCAGTTCGGCTTTGCTTCAT+TGG | 0.318767 | 6.1:+1433803 | MS.gene82869:CDS |
TTGGTTTCATGTTTGCTACT+TGG | 0.322424 | 6.1:+1432480 | MS.gene82869:CDS |
CACTCACACCATCAAATCTA+TGG | 0.327426 | 6.1:+1434093 | MS.gene82869:CDS |
TGGAATGTTGTAACTGTTGC+TGG | 0.349362 | 6.1:-1433783 | None:intergenic |
GCTTCCTTTGTCTTTGGCAC+TGG | 0.363988 | 6.1:-1437412 | None:intergenic |
ATTTGGTGGCAGGTTTCATA+TGG | 0.368164 | 6.1:+1437002 | MS.gene82869:intron |
ACTTGCCGTGGCTCATACAT+TGG | 0.369426 | 6.1:+1434024 | MS.gene82869:CDS |
GCTATGTATAAGATCCGTTT+TGG | 0.372703 | 6.1:+1435880 | MS.gene82869:CDS |
CCTTCATCACTCTGTGCCTC+AGG | 0.380559 | 6.1:-1432419 | None:intergenic |
GTTGTAACTGTTGCTGGAAA+TGG | 0.381845 | 6.1:-1433777 | None:intergenic |
CATTGGTAATCAATTTGATC+TGG | 0.388883 | 6.1:+1433820 | MS.gene82869:CDS |
TGACAGGTGAGACAGGAGTT+TGG | 0.392266 | 6.1:-1437112 | None:intergenic |
CTTCAACATTTACAACAAAC+AGG | 0.393424 | 6.1:+1432520 | MS.gene82869:CDS |
GAAAGGTTCCATAGATTTGA+TGG | 0.395306 | 6.1:-1434101 | None:intergenic |
CCAATGAAGCAAAGCCGAAC+TGG | 0.397512 | 6.1:-1433803 | None:intergenic |
CATTCCGCGATTGATTTGTA+AGG | 0.398281 | 6.1:-1435291 | None:intergenic |
TGAACAGATGCCTACTTTAT+GGG | 0.406348 | 6.1:+1434850 | MS.gene82869:intron |
CTTGCCGTGGCTCATACATT+GGG | 0.418644 | 6.1:+1434025 | MS.gene82869:CDS |
CTTGTTCAGTCTCTTCAGCT+TGG | 0.421995 | 6.1:+1432461 | MS.gene82869:CDS |
TGACTGAAGTCTCTTTCAAT+TGG | 0.437171 | 6.1:+1434921 | MS.gene82869:CDS |
AATTACATACTGCAGATTGC+AGG | 0.454301 | 6.1:-1435527 | None:intergenic |
GGAACTGCTATTGCACTTGT+TGG | 0.456119 | 6.1:+1437355 | MS.gene82869:intron |
GCTCTCGAACATTCAATCCT+TGG | 0.458325 | 6.1:-1435859 | None:intergenic |
AAGGGAAACAACAAACTTCT+GGG | 0.458763 | 6.1:+1432438 | MS.gene82869:CDS |
GTCTCACCTGTCAATGCCCT+TGG | 0.465418 | 6.1:+1437122 | MS.gene82869:CDS |
CCTGAGGCACAGAGTGATGA+AGG | 0.470545 | 6.1:+1432419 | MS.gene82869:CDS |
TTCTCTTCTACCTATAGTTG+GGG | 0.472836 | 6.1:+1434880 | MS.gene82869:CDS |
ACCTCACCTGCTGGTATGCA+TGG | 0.479845 | 6.1:-1435916 | None:intergenic |
TGCTGCTTCTTCTGTTCCTG+AGG | 0.480346 | 6.1:+1432403 | MS.gene82869:CDS |
ATATAGCATATGGTACCAAC+AGG | 0.484432 | 6.1:-1435473 | None:intergenic |
CCCTCCGAAAATATAGCATA+TGG | 0.496477 | 6.1:-1435483 | None:intergenic |
ACAGTTACAACATTCCAGTT+CGG | 0.514414 | 6.1:+1433789 | MS.gene82869:CDS |
GACTTACCAAGGGCATTGAC+AGG | 0.516195 | 6.1:-1437128 | None:intergenic |
CCGCGATTGATTTGTAAGGT+TGG | 0.519373 | 6.1:-1435287 | None:intergenic |
ACATTACCTCACCCAAAAGA+AGG | 0.524079 | 6.1:-1434144 | None:intergenic |
AGGGCATTGACAGGTGAGAC+AGG | 0.524854 | 6.1:-1437119 | None:intergenic |
TTTGGTGGCAGGTTTCATAT+GGG | 0.526674 | 6.1:+1437003 | MS.gene82869:intron |
TTTCCGACTGAGTGTGTCAC+AGG | 0.527740 | 6.1:-1437044 | None:intergenic |
GAAGCAGAATGCAGCCAAAA+CGG | 0.532187 | 6.1:-1435894 | None:intergenic |
AATGTATGAGCCACGGCAAG+TGG | 0.534798 | 6.1:-1434022 | None:intergenic |
GAAGAAACCACCCATAAAGT+AGG | 0.541772 | 6.1:-1434860 | None:intergenic |
GAAAGAACAACAGTGAAGAA+AGG | 0.544323 | 6.1:-1434118 | None:intergenic |
CTGCTTCCATGCATACCAGC+AGG | 0.555668 | 6.1:+1435910 | MS.gene82869:CDS |
ACCGAAAATTAGTAGATCAC+AGG | 0.555814 | 6.1:+1433863 | MS.gene82869:CDS |
GACGAACATTAGTCTTGGCA+AGG | 0.560588 | 6.1:+1434057 | MS.gene82869:CDS |
TATGAGCCACGGCAAGTGGA+AGG | 0.564903 | 6.1:-1434018 | None:intergenic |
AAAACTAATGGCTAATGAAG+AGG | 0.569321 | 6.1:+1435324 | MS.gene82869:CDS |
GATTGGATTCAGCACTGCAA+TGG | 0.589169 | 6.1:+1435261 | MS.gene82869:CDS |
CATTACCTCACCCAAAAGAA+GGG | 0.591595 | 6.1:-1434143 | None:intergenic |
TCTTGTATTCAAGGGCAAAG+AGG | 0.597986 | 6.1:+1437383 | MS.gene82869:CDS |
AGCAATCCTTCCACTTGCCG+TGG | 0.598900 | 6.1:+1434012 | MS.gene82869:CDS |
CTTCCTATATAGGCAAGCCA+AGG | 0.608037 | 6.1:+1435842 | MS.gene82869:intron |
TCTCTTCTACCTATAGTTGG+GGG | 0.608716 | 6.1:+1434881 | MS.gene82869:CDS |
ACAGATGCCTACTTTATGGG+TGG | 0.618256 | 6.1:+1434853 | MS.gene82869:intron |
TAAGCCAGTGCCAAAGACAA+AGG | 0.620413 | 6.1:+1437408 | MS.gene82869:CDS |
ATTCCCCAATGTATGAGCCA+CGG | 0.635689 | 6.1:-1434029 | None:intergenic |
TCACCTGTGACACACTCAGT+CGG | 0.658587 | 6.1:+1437041 | MS.gene82869:CDS |
ACTGCAGATTGCAGGTACGA+AGG | 0.667294 | 6.1:-1435519 | None:intergenic |
TTGCCGTGGCTCATACATTG+GGG | 0.675815 | 6.1:+1434026 | MS.gene82869:CDS |
CTGAGGCACAGAGTGATGAA+GGG | 0.684073 | 6.1:+1432420 | MS.gene82869:CDS |
CCAACCTTACAAATCAATCG+CGG | 0.733340 | 6.1:+1435287 | MS.gene82869:CDS |
CRISPR-GE
badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
---|---|---|---|---|---|
!! | TTATAATTTCAATACATTTA+GGG | + | chr6.1:1434524-1434543 | MS.gene82869:intron | 10.0% |
!! | TTTATAATTTCAATACATTT+AGG | + | chr6.1:1434523-1434542 | MS.gene82869:intron | 10.0% |
!!! | AGGTATTTTTTTTTTTTTTA+AGG | + | chr6.1:1432540-1432559 | MS.gene82869:intron | 10.0% |
!! | GAAAATTAAAAGAAGAAATA+TGG | - | chr6.1:1437246-1437265 | None:intergenic | 15.0% |
!! | TACTTATTAATTCATTCATT+TGG | + | chr6.1:1432664-1432683 | MS.gene82869:intron | 15.0% |
!! | TATAAAGTTATTCATTTGAT+TGG | + | chr6.1:1432788-1432807 | MS.gene82869:intron | 15.0% |
!!! | AAATAGTATATTTGGTTTAT+AGG | + | chr6.1:1436600-1436619 | MS.gene82869:intron | 15.0% |
!!! | TAAAAAGCATTTACTATAAT+CGG | - | chr6.1:1436217-1436236 | None:intergenic | 15.0% |
!!! | TATCCTTATTTAAATAATTG+AGG | + | chr6.1:1435786-1435805 | MS.gene82869:intron | 15.0% |
!!! | TTTAAAATGAAACATTTTTC+TGG | + | chr6.1:1436326-1436345 | MS.gene82869:intron | 15.0% |
!! | AAGTAAGTTACTATTACTAA+AGG | - | chr6.1:1436939-1436958 | None:intergenic | 20.0% |
!! | AATTGAATAAAATTCATGCA+AGG | + | chr6.1:1435684-1435703 | MS.gene82869:intron | 20.0% |
!! | CATATTAATTATAATCTGCA+TGG | + | chr6.1:1436002-1436021 | MS.gene82869:intron | 20.0% |
!! | CTTCCTCAATTATTTAAATA+AGG | - | chr6.1:1435792-1435811 | None:intergenic | 20.0% |
!! | TAAAAAGTCGTGATATTATA+AGG | - | chr6.1:1435605-1435624 | None:intergenic | 20.0% |
!!! | AACAGAAGATATTTTTTGTT+TGG | + | chr6.1:1436558-1436577 | MS.gene82869:intron | 20.0% |
!!! | AGAGTATCATAATTCAATAT+TGG | - | chr6.1:1433443-1433462 | None:intergenic | 20.0% |
!!! | ATCTATTTTGTTAGATAGTT+TGG | + | chr6.1:1434326-1434345 | MS.gene82869:intron | 20.0% |
!!! | ATCTTTTGTTAGTAAATTGA+CGG | - | chr6.1:1434385-1434404 | None:intergenic | 20.0% |
!!! | GAATAAATATTGTTGACTTA+TGG | + | chr6.1:1436456-1436475 | MS.gene82869:intron | 20.0% |
!!! | GTCAATTTTTTTTTACACAT+GGG | + | chr6.1:1436348-1436367 | MS.gene82869:intron | 20.0% |
!!! | TCTCTAATGTATGTATATTT+TGG | + | chr6.1:1433224-1433243 | MS.gene82869:intron | 20.0% |
!!! | TTTTTTTTTATATCCGGATA+TGG | + | chr6.1:1436091-1436110 | MS.gene82869:intron | 20.0% |
! | AAAAAATTGGTCATGGTTAT+CGG | + | chr6.1:1433149-1433168 | MS.gene82869:intron | 25.0% |
! | AAACATTATTAGTCATATGG+CGG | - | chr6.1:1432629-1432648 | None:intergenic | 25.0% |
! | AAATGTCCTTGTTACATATA+TGG | + | chr6.1:1434704-1434723 | MS.gene82869:intron | 25.0% |
! | AATGTGTCCTTTAATTAGTT+TGG | + | chr6.1:1434293-1434312 | MS.gene82869:intron | 25.0% |
! | ACAAAAATTGCTACAACTTA+TGG | + | chr6.1:1437207-1437226 | MS.gene82869:intron | 25.0% |
! | ACAAGACATTCACAAATAAT+TGG | - | chr6.1:1433920-1433939 | None:intergenic | 25.0% |
! | ACCAAATTCAAATGATTACA+TGG | + | chr6.1:1434656-1434675 | MS.gene82869:intron | 25.0% |
! | ACGAATTAAACCTTAACAAA+GGG | - | chr6.1:1432698-1432717 | None:intergenic | 25.0% |
! | AGTGAATTAATTAGATTCTG+GGG | + | chr6.1:1432910-1432929 | MS.gene82869:intron | 25.0% |
! | ATAAGGTTTGATTCATTCTA+AGG | + | chr6.1:1433284-1433303 | MS.gene82869:intron | 25.0% |
! | ATAGCATATAAAGTTACCAA+TGG | - | chr6.1:1435755-1435774 | None:intergenic | 25.0% |
! | ATATCTAATAAGACCTTGTT+TGG | + | chr6.1:1434982-1435001 | MS.gene82869:intron | 25.0% |
! | ATCATTAGAGTATGTAACAT+TGG | + | chr6.1:1436830-1436849 | MS.gene82869:intron | 25.0% |
! | ATTTCTGAGTTTGTCATTAA+AGG | + | chr6.1:1436705-1436724 | MS.gene82869:intron | 25.0% |
! | CAAAAATTGCTACAACTTAT+GGG | + | chr6.1:1437208-1437227 | MS.gene82869:intron | 25.0% |
! | CAAACATTAGCAACTAAATA+TGG | - | chr6.1:1436908-1436927 | None:intergenic | 25.0% |
! | CACAAAAAAGGAAATGAAAA+TGG | - | chr6.1:1437318-1437337 | None:intergenic | 25.0% |
! | CAGTGAATTAATTAGATTCT+GGG | + | chr6.1:1432909-1432928 | MS.gene82869:intron | 25.0% |
! | CCAAATTCAAATGATTACAT+GGG | + | chr6.1:1434657-1434676 | MS.gene82869:intron | 25.0% |
! | CTAACAAAATAGATAATTCG+AGG | - | chr6.1:1434320-1434339 | None:intergenic | 25.0% |
! | CTAATGATCTGTTTATGTTA+AGG | - | chr6.1:1436818-1436837 | None:intergenic | 25.0% |
! | GAAGAAATATGGATAGTAAA+TGG | - | chr6.1:1437235-1437254 | None:intergenic | 25.0% |
! | GACAACATATATTTAACCAT+TGG | + | chr6.1:1435736-1435755 | MS.gene82869:intron | 25.0% |
! | GATTCAAGTCATAAATCAAA+CGG | - | chr6.1:1433555-1433574 | None:intergenic | 25.0% |
! | GTCAAACATTATTAGTCATA+TGG | - | chr6.1:1432632-1432651 | None:intergenic | 25.0% |
! | TAAGTTAGGATATGGAATAA+TGG | + | chr6.1:1433313-1433332 | MS.gene82869:intron | 25.0% |
! | TACGAATTAAACCTTAACAA+AGG | - | chr6.1:1432699-1432718 | None:intergenic | 25.0% |
! | TAGCAGAACTACATATTATT+TGG | - | chr6.1:1435195-1435214 | None:intergenic | 25.0% |
! | TATGATACACTATGATGATA+AGG | + | chr6.1:1433267-1433286 | MS.gene82869:intron | 25.0% |
! | TATTGAGTAAAGTTTACGTA+GGG | - | chr6.1:1435636-1435655 | None:intergenic | 25.0% |
! | TTAAACAATATAGCCAAACA+AGG | - | chr6.1:1434998-1435017 | None:intergenic | 25.0% |
!! | AATTCCCAATCAATTTTATC+CGG | + | chr6.1:1436066-1436085 | MS.gene82869:intron | 25.0% |
!! | ACTATTTTCAGATTAGTGTT+AGG | + | chr6.1:1436757-1436776 | MS.gene82869:intron | 25.0% |
!! | AGTATGTAACATTGGTATTT+TGG | + | chr6.1:1436838-1436857 | MS.gene82869:intron | 25.0% |
!! | CTTCTGTTTTACATGAAATA+TGG | - | chr6.1:1436546-1436565 | None:intergenic | 25.0% |
!! | GTTAGATTTTACTCATGATT+CGG | + | chr6.1:1433687-1433706 | MS.gene82869:intron | 25.0% |
!! | TGATTAGCTACAATAAGTTT+AGG | - | chr6.1:1433500-1433519 | None:intergenic | 25.0% |
!! | TTCAAGTACTTGCAAATTTT+TGG | + | chr6.1:1437171-1437190 | MS.gene82869:intron | 25.0% |
!!! | AAATGCTTTTTATATCGATG+TGG | + | chr6.1:1436225-1436244 | MS.gene82869:intron | 25.0% |
!!! | AACTGATTTTAAGTTTGTGT+AGG | + | chr6.1:1436505-1436524 | MS.gene82869:intron | 25.0% |
!!! | CATTTTCATTTCCTTTTTTG+TGG | + | chr6.1:1437316-1437335 | MS.gene82869:intron | 25.0% |
!!! | GGATGTTTTTTGTAATTTGT+TGG | + | chr6.1:1434413-1434432 | MS.gene82869:intron | 25.0% |
!!! | GGTCAATTTTTTTTTACACA+TGG | + | chr6.1:1436347-1436366 | MS.gene82869:intron | 25.0% |
!!! | GTAGCTAATCACTTTTTTAT+TGG | + | chr6.1:1433509-1433528 | MS.gene82869:intron | 25.0% |
!!! | TAGACTTTTAGAACCTAATA+TGG | - | chr6.1:1433756-1433775 | None:intergenic | 25.0% |
!!! | TAGCTGACTAATTGTTATTT+TGG | - | chr6.1:1434582-1434601 | None:intergenic | 25.0% |
!!! | TGATGGATATCTAATTGTTT+TGG | + | chr6.1:1434798-1434817 | MS.gene82869:intron | 25.0% |
!!! | TGTTTTGAGCAAAAAACTAA+TGG | + | chr6.1:1435312-1435331 | MS.gene82869:CDS | 25.0% |
AAAACCCGGATAAAATTGAT+TGG | - | chr6.1:1436074-1436093 | None:intergenic | 30.0% | |
AAAACTAATGGCTAATGAAG+AGG | + | chr6.1:1435324-1435343 | MS.gene82869:CDS | 30.0% | |
AAACCCGGATAAAATTGATT+GGG | - | chr6.1:1436073-1436092 | None:intergenic | 30.0% | |
AAATGTAATTAGAGTCGTGT+TGG | - | chr6.1:1433065-1433084 | None:intergenic | 30.0% | |
AAGAAACTTCTTGTATGAGA+TGG | - | chr6.1:1436386-1436405 | None:intergenic | 30.0% | |
AATAAGCTGAAAACAGTTGA+CGG | + | chr6.1:1435139-1435158 | MS.gene82869:intron | 30.0% | |
AATTGAGGAAGAGAAAAATG+TGG | + | chr6.1:1435801-1435820 | MS.gene82869:intron | 30.0% | |
ACATTAGTACTTGTATGCAT+AGG | - | chr6.1:1435028-1435047 | None:intergenic | 30.0% | |
ACTAACAAAAGATACACTCA+CGG | + | chr6.1:1434392-1434411 | MS.gene82869:intron | 30.0% | |
ACTAATCCAAATCACTAAGT+TGG | - | chr6.1:1433393-1433412 | None:intergenic | 30.0% | |
AGTATACCAACTTAGTGATT+TGG | + | chr6.1:1433384-1433403 | MS.gene82869:intron | 30.0% | |
CAACAGGAAAAATGAAATGA+TGG | - | chr6.1:1435460-1435479 | None:intergenic | 30.0% | |
CCCATGTAATCATTTGAATT+TGG | - | chr6.1:1434660-1434679 | None:intergenic | 30.0% | |
CCGGATATAAAAAAAAAACC+CGG | - | chr6.1:1436088-1436107 | None:intergenic | 30.0% | |
CTAATTAAAGGACACATTCA+TGG | - | chr6.1:1434291-1434310 | None:intergenic | 30.0% | |
CTATTGAGTAAAGTTTACGT+AGG | - | chr6.1:1435637-1435656 | None:intergenic | 30.0% | |
CTCCATGATAAAAGGAAAAT+TGG | - | chr6.1:1436731-1436750 | None:intergenic | 30.0% | |
CTGTATAGTAGAAAATGACT+TGG | + | chr6.1:1434747-1434766 | MS.gene82869:intron | 30.0% | |
CTTCAACATTTACAACAAAC+AGG | + | chr6.1:1432520-1432539 | MS.gene82869:CDS | 30.0% | |
GAGCTTCACATATGATATAT+AGG | + | chr6.1:1433587-1433606 | MS.gene82869:intron | 30.0% | |
GATATGGAATAATGGCTAAT+TGG | + | chr6.1:1433321-1433340 | MS.gene82869:intron | 30.0% | |
GCAGTGAATTAATTAGATTC+TGG | + | chr6.1:1432908-1432927 | MS.gene82869:intron | 30.0% | |
GTGACATCAATAATTGATGT+TGG | + | chr6.1:1436969-1436988 | MS.gene82869:intron | 30.0% | |
TCGAATGATGTACTTTATTC+AGG | + | chr6.1:1436405-1436424 | MS.gene82869:intron | 30.0% | |
TGAAATCAAATCCAGTTATG+TGG | + | chr6.1:1436177-1436196 | MS.gene82869:intron | 30.0% | |
TGCAAGTACTTGAAAATATG+TGG | - | chr6.1:1437165-1437184 | None:intergenic | 30.0% | |
TTAAAACCAATCCACATAAC+TGG | - | chr6.1:1436191-1436210 | None:intergenic | 30.0% | |
TTTATATCCGGATATGGATT+TGG | + | chr6.1:1436097-1436116 | MS.gene82869:intron | 30.0% | |
! | ACCTGTGATCTACTAATTTT+CGG | - | chr6.1:1433867-1433886 | None:intergenic | 30.0% |
! | ATTCCCAATCAATTTTATCC+GGG | + | chr6.1:1436067-1436086 | MS.gene82869:intron | 30.0% |
! | CAATTTTCCTTTTATCATGG+AGG | + | chr6.1:1436729-1436748 | MS.gene82869:intron | 30.0% |
! | CATTAGAGATTTGTTCAGTT+TGG | - | chr6.1:1433213-1433232 | None:intergenic | 30.0% |
! | CATTCTCTTTTAACACAAGA+AGG | + | chr6.1:1433010-1433029 | MS.gene82869:intron | 30.0% |
! | CATTGGTAATCAATTTGATC+TGG | + | chr6.1:1433820-1433839 | MS.gene82869:CDS | 30.0% |
! | CTCGATTTGATAACCATATT+AGG | + | chr6.1:1433740-1433759 | MS.gene82869:intron | 30.0% |
! | GGTACCATATGCTATATTTT+CGG | + | chr6.1:1435479-1435498 | MS.gene82869:CDS | 30.0% |
! | GTAACAAGGACATTTTCTTA+GGG | - | chr6.1:1434699-1434718 | None:intergenic | 30.0% |
! | TAGCATGTTACTTCCTATAT+AGG | + | chr6.1:1435832-1435851 | MS.gene82869:intron | 30.0% |
! | TGGAGTTTTCTTGTATTCAA+GGG | + | chr6.1:1437375-1437394 | MS.gene82869:CDS | 30.0% |
! | TGTAACAAGGACATTTTCTT+AGG | - | chr6.1:1434700-1434719 | None:intergenic | 30.0% |
! | TTACTCATGATTCGGAAAAT+AGG | + | chr6.1:1433695-1433714 | MS.gene82869:intron | 30.0% |
! | TTCTAAGGAATCACTAAGTT+AGG | + | chr6.1:1433299-1433318 | MS.gene82869:intron | 30.0% |
! | TTGGAGTTTTCTTGTATTCA+AGG | + | chr6.1:1437374-1437393 | MS.gene82869:CDS | 30.0% |
!! | AAGTTGGTATACTAACTAAC+TGG | - | chr6.1:1433377-1433396 | None:intergenic | 30.0% |
!! | AATTAATTAGATTCTGGGGT+GGG | + | chr6.1:1432914-1432933 | MS.gene82869:intron | 30.0% |
!! | CATCATTTCATTTTTCCTGT+TGG | + | chr6.1:1435458-1435477 | MS.gene82869:CDS | 30.0% |
!! | CCAAAATCGATGTTTTTCAA+CGG | - | chr6.1:1434207-1434226 | None:intergenic | 30.0% |
!!! | CCGGGTTTTTTTTTTATATC+CGG | + | chr6.1:1436085-1436104 | MS.gene82869:intron | 30.0% |
!!! | GGTTTTTTAACCCTTTGTTA+AGG | + | chr6.1:1432685-1432704 | MS.gene82869:intron | 30.0% |
AAGGGAAACAACAAACTTCT+GGG | + | chr6.1:1432438-1432457 | MS.gene82869:CDS | 35.0% | |
AAGTAGGCATCTGTTCATTT+AGG | - | chr6.1:1434847-1434866 | None:intergenic | 35.0% | |
AATTACATACTGCAGATTGC+AGG | - | chr6.1:1435530-1435549 | None:intergenic | 35.0% | |
ACAGTTACAACATTCCAGTT+CGG | + | chr6.1:1433789-1433808 | MS.gene82869:CDS | 35.0% | |
ACATCGACAAGGCAATAATT+TGG | - | chr6.1:1433103-1433122 | None:intergenic | 35.0% | |
ACCGAAAATTAGTAGATCAC+AGG | + | chr6.1:1433863-1433882 | MS.gene82869:CDS | 35.0% | |
ATATAGCATATGGTACCAAC+AGG | - | chr6.1:1435476-1435495 | None:intergenic | 35.0% | |
ATCAAACCAATCAATCCACT+AGG | - | chr6.1:1434443-1434462 | None:intergenic | 35.0% | |
ATGAACAGATGCCTACTTTA+TGG | + | chr6.1:1434849-1434868 | MS.gene82869:intron | 35.0% | |
ATGACGCCATATATGTAACA+AGG | - | chr6.1:1434713-1434732 | None:intergenic | 35.0% | |
ATGCAAGGACTAAGCATAAA+AGG | + | chr6.1:1435699-1435718 | MS.gene82869:intron | 35.0% | |
ATGTTGGAGCTTAATGCATT+TGG | + | chr6.1:1436985-1437004 | MS.gene82869:intron | 35.0% | |
CCAAATTAGGACCACAAAAA+AGG | - | chr6.1:1437330-1437349 | None:intergenic | 35.0% | |
CTAAAGCAAGAATAACTTCG+TGG | + | chr6.1:1434956-1434975 | MS.gene82869:intron | 35.0% | |
CTTCTCTTCTACCTATAGTT+GGG | + | chr6.1:1434879-1434898 | MS.gene82869:CDS | 35.0% | |
GAAAGAACAACAGTGAAGAA+AGG | - | chr6.1:1434121-1434140 | None:intergenic | 35.0% | |
GAAAGGTTCCATAGATTTGA+TGG | - | chr6.1:1434104-1434123 | None:intergenic | 35.0% | |
GCATGCAAAAAAATTGGTCA+TGG | + | chr6.1:1433142-1433161 | MS.gene82869:intron | 35.0% | |
GGAATCACTAAGTTAGGATA+TGG | + | chr6.1:1433305-1433324 | MS.gene82869:intron | 35.0% | |
TAGGACTGAAAATCGAGTAA+AGG | + | chr6.1:1434625-1434644 | MS.gene82869:intron | 35.0% | |
TATTAGTCATATGGCGGTTA+TGG | - | chr6.1:1432623-1432642 | None:intergenic | 35.0% | |
TCAAACCAATCAATCCACTA+GGG | - | chr6.1:1434442-1434461 | None:intergenic | 35.0% | |
TCAAATCCAGTTATGTGGAT+TGG | + | chr6.1:1436182-1436201 | MS.gene82869:intron | 35.0% | |
TCAACAACCAAATCCATATC+CGG | - | chr6.1:1436107-1436126 | None:intergenic | 35.0% | |
TCGAGGACCAAACTAATTAA+AGG | - | chr6.1:1434303-1434322 | None:intergenic | 35.0% | |
TCTTCTCTTCTACCTATAGT+TGG | + | chr6.1:1434878-1434897 | MS.gene82869:CDS | 35.0% | |
TGAACAGATGCCTACTTTAT+GGG | + | chr6.1:1434850-1434869 | MS.gene82869:intron | 35.0% | |
TGACTGAAGTCTCTTTCAAT+TGG | + | chr6.1:1434921-1434940 | MS.gene82869:CDS | 35.0% | |
TTCTCTTCTACCTATAGTTG+GGG | + | chr6.1:1434880-1434899 | MS.gene82869:CDS | 35.0% | |
! | ACCATATGCTATATTTTCGG+AGG | + | chr6.1:1435482-1435501 | MS.gene82869:CDS | 35.0% |
! | CACATGTGCAATGAAGATTT+TGG | + | chr6.1:1436289-1436308 | MS.gene82869:intron | 35.0% |
! | CACGCAGTTTAGTAATTTGT+AGG | + | chr6.1:1434606-1434625 | MS.gene82869:intron | 35.0% |
! | CCATATGCTATATTTTCGGA+GGG | + | chr6.1:1435483-1435502 | MS.gene82869:CDS | 35.0% |
! | GAATGAGCAACTAAGCTTTT+AGG | - | chr6.1:1436043-1436062 | None:intergenic | 35.0% |
! | GAATTAATTAGATTCTGGGG+TGG | + | chr6.1:1432913-1432932 | MS.gene82869:intron | 35.0% |
! | GATCTACTAATTTTCGGTCT+GGG | - | chr6.1:1433861-1433880 | None:intergenic | 35.0% |
! | GCTATGTATAAGATCCGTTT+TGG | + | chr6.1:1435880-1435899 | MS.gene82869:CDS | 35.0% |
! | GGCCAATTTTCCTTTTATCA+TGG | + | chr6.1:1436726-1436745 | MS.gene82869:intron | 35.0% |
! | GTTCTTTCATCCCTTCTTTT+GGG | + | chr6.1:1434133-1434152 | MS.gene82869:CDS | 35.0% |
! | TGATCTACTAATTTTCGGTC+TGG | - | chr6.1:1433862-1433881 | None:intergenic | 35.0% |
! | TGGATTTGATTTCACAACAC+CGG | - | chr6.1:1436171-1436190 | None:intergenic | 35.0% |
! | TGTTCTTTCATCCCTTCTTT+TGG | + | chr6.1:1434132-1434151 | MS.gene82869:CDS | 35.0% |
! | TTGGTTTCATGTTTGCTACT+TGG | + | chr6.1:1432480-1432499 | MS.gene82869:CDS | 35.0% |
! | TTGTTGATAAATCGCGTATC+CGG | + | chr6.1:1436120-1436139 | MS.gene82869:intron | 35.0% |
! | TTTCCTTTTATCATGGAGGT+CGG | + | chr6.1:1436733-1436752 | MS.gene82869:intron | 35.0% |
!! | ACTTGAAGCATGTTTTTGAC+AGG | + | chr6.1:1435398-1435417 | MS.gene82869:intron | 35.0% |
!! | ATGTTTTTGACAGGAAGCTT+TGG | + | chr6.1:1435407-1435426 | MS.gene82869:intron | 35.0% |
!! | ATTGTGCGTTGATTAAACAC+GGG | + | chr6.1:1436679-1436698 | MS.gene82869:intron | 35.0% |
!! | CCATAGTTGCTCATTTTAAC+CGG | - | chr6.1:1436142-1436161 | None:intergenic | 35.0% |
!! | CTTTTGACGAACATTAGTCT+TGG | + | chr6.1:1434052-1434071 | MS.gene82869:CDS | 35.0% |
!! | GATTGTGCGTTGATTAAACA+CGG | + | chr6.1:1436678-1436697 | MS.gene82869:intron | 35.0% |
!! | TAATTTGTTGGTTTCCCTAG+TGG | + | chr6.1:1434425-1434444 | MS.gene82869:intron | 35.0% |
!! | TGCTACTGTGAGATTGATTT+TGG | + | chr6.1:1435210-1435229 | MS.gene82869:intron | 35.0% |
!!! | AGTCCTTGTTTTGCTTTCAT+GGG | - | chr6.1:1435662-1435681 | None:intergenic | 35.0% |
!!! | CCGTTGAAAAACATCGATTT+TGG | + | chr6.1:1434204-1434223 | MS.gene82869:intron | 35.0% |
!!! | CCTTTTTTGTGGTCCTAATT+TGG | + | chr6.1:1437327-1437346 | MS.gene82869:intron | 35.0% |
!!! | GGTTTTAAACCAAGAAGGAA+AGG | - | chr6.1:1434480-1434499 | None:intergenic | 35.0% |
!!! | TAGTCCTTGTTTTGCTTTCA+TGG | - | chr6.1:1435663-1435682 | None:intergenic | 35.0% |
!!! | TTTTGGTTCCTAAATGTACG+AGG | - | chr6.1:1434565-1434584 | None:intergenic | 35.0% |
AAGTAGGGTTGCTTATGGAT+AGG | - | chr6.1:1436267-1436286 | None:intergenic | 40.0% | |
ACATGTTCTCGTCTCAAAAC+AGG | + | chr6.1:1435239-1435258 | MS.gene82869:intron | 40.0% | |
ACATTACCTCACCCAAAAGA+AGG | - | chr6.1:1434147-1434166 | None:intergenic | 40.0% | |
ACCATTAGAGAGACTTACCA+AGG | - | chr6.1:1437142-1437161 | None:intergenic | 40.0% | |
ATGAACGGAAAACACATCCA+GGG | - | chr6.1:1434353-1434372 | None:intergenic | 40.0% | |
CAATCTACACCTTTCCTTCT+TGG | + | chr6.1:1434468-1434487 | MS.gene82869:intron | 40.0% | |
CACTCACACCATCAAATCTA+TGG | + | chr6.1:1434093-1434112 | MS.gene82869:CDS | 40.0% | |
CATTACCTCACCCAAAAGAA+GGG | - | chr6.1:1434146-1434165 | None:intergenic | 40.0% | |
CATTGCACATGTGACAAGTA+GGG | - | chr6.1:1436282-1436301 | None:intergenic | 40.0% | |
CCAACCTTACAAATCAATCG+CGG | + | chr6.1:1435287-1435306 | MS.gene82869:CDS | 40.0% | |
CCATTAGAGAGACTTACCAA+GGG | - | chr6.1:1437141-1437160 | None:intergenic | 40.0% | |
CCCTCCGAAAATATAGCATA+TGG | - | chr6.1:1435486-1435505 | None:intergenic | 40.0% | |
CCGGTTAAAATGAGCAACTA+TGG | + | chr6.1:1436139-1436158 | MS.gene82869:intron | 40.0% | |
GAAGAAACCACCCATAAAGT+AGG | - | chr6.1:1434863-1434882 | None:intergenic | 40.0% | |
GAAGGGAAACAACAAACTTC+TGG | + | chr6.1:1432437-1432456 | MS.gene82869:CDS | 40.0% | |
GCTCATAAATGAGCAAGTGA+TGG | + | chr6.1:1434781-1434800 | MS.gene82869:intron | 40.0% | |
GTTGTAACTGTTGCTGGAAA+TGG | - | chr6.1:1433780-1433799 | None:intergenic | 40.0% | |
TCATTGCACATGTGACAAGT+AGG | - | chr6.1:1436283-1436302 | None:intergenic | 40.0% | |
TCTCTTCTACCTATAGTTGG+GGG | + | chr6.1:1434881-1434900 | MS.gene82869:CDS | 40.0% | |
TCTTGTATTCAAGGGCAAAG+AGG | + | chr6.1:1437383-1437402 | MS.gene82869:CDS | 40.0% | |
TGAGCAACTATGGACATAAC+CGG | + | chr6.1:1436149-1436168 | MS.gene82869:intron | 40.0% | |
TGGAATGTTGTAACTGTTGC+TGG | - | chr6.1:1433786-1433805 | None:intergenic | 40.0% | |
TTCTCGTCTCAAAACAGGAT+TGG | + | chr6.1:1435244-1435263 | MS.gene82869:intron | 40.0% | |
TTGGAGCTTAATGCATTTGG+TGG | + | chr6.1:1436988-1437007 | MS.gene82869:intron | 40.0% | |
TTGTTAGATAGTTTGGTCCC+TGG | + | chr6.1:1434333-1434352 | MS.gene82869:intron | 40.0% | |
! | ATTTGGTGGCAGGTTTCATA+TGG | + | chr6.1:1437002-1437021 | MS.gene82869:intron | 40.0% |
! | GTGTTTTCCGTTCATCAGTT+TGG | + | chr6.1:1434358-1434377 | MS.gene82869:intron | 40.0% |
! | TTTGGTGGCAGGTTTCATAT+GGG | + | chr6.1:1437003-1437022 | MS.gene82869:intron | 40.0% |
!! | AATCCTTGGCTTGCCTATAT+AGG | - | chr6.1:1435848-1435867 | None:intergenic | 40.0% |
!! | CATTCCGCGATTGATTTGTA+AGG | - | chr6.1:1435294-1435313 | None:intergenic | 40.0% |
!! | CGATGTTTTTCAACGGATAC+AGG | - | chr6.1:1434200-1434219 | None:intergenic | 40.0% |
!!! | CCAATTTTTTTGCATGCCAC+CGG | - | chr6.1:1433139-1433158 | None:intergenic | 40.0% |
!!! | CTGCTGGTTTTAAACCAAGA+AGG | - | chr6.1:1434485-1434504 | None:intergenic | 40.0% |
!!! | GTCCTTGTTTTGCTTTCATG+GGG | - | chr6.1:1435661-1435680 | None:intergenic | 40.0% |
AAACCAGCAGAGACAAACAG+AGG | + | chr6.1:1434495-1434514 | MS.gene82869:intron | 45.0% | |
AACCAGCAGAGACAAACAGA+GGG | + | chr6.1:1434496-1434515 | MS.gene82869:intron | 45.0% | |
ACAGATGCCTACTTTATGGG+TGG | + | chr6.1:1434853-1434872 | MS.gene82869:intron | 45.0% | |
ACGACACTGAAACATCGACA+AGG | - | chr6.1:1433114-1433133 | None:intergenic | 45.0% | |
ATGTGAAAAACCTCACCTGC+TGG | - | chr6.1:1435928-1435947 | None:intergenic | 45.0% | |
ATTCCCCAATGTATGAGCCA+CGG | - | chr6.1:1434032-1434051 | None:intergenic | 45.0% | |
CCCTTGGTAAGTCTCTCTAA+TGG | + | chr6.1:1437138-1437157 | MS.gene82869:intron | 45.0% | |
CCGGTGGCATGCAAAAAAAT+TGG | + | chr6.1:1433136-1433155 | MS.gene82869:intron | 45.0% | |
CTCGACACTGCTAACATGTA+TGG | - | chr6.1:1433182-1433201 | None:intergenic | 45.0% | |
CTTCCTATATAGGCAAGCCA+AGG | + | chr6.1:1435842-1435861 | MS.gene82869:intron | 45.0% | |
CTTGTTCAGTCTCTTCAGCT+TGG | + | chr6.1:1432461-1432480 | MS.gene82869:CDS | 45.0% | |
GAAGCAGAATGCAGCCAAAA+CGG | - | chr6.1:1435897-1435916 | None:intergenic | 45.0% | |
GATGAACGGAAAACACATCC+AGG | - | chr6.1:1434354-1434373 | None:intergenic | 45.0% | |
GATTGGATTCAGCACTGCAA+TGG | + | chr6.1:1435261-1435280 | MS.gene82869:CDS | 45.0% | |
GCAGTTCCTGCAACCAAATT+AGG | - | chr6.1:1437343-1437362 | None:intergenic | 45.0% | |
GCTCTCGAACATTCAATCCT+TGG | - | chr6.1:1435862-1435881 | None:intergenic | 45.0% | |
GGAACTGCTATTGCACTTGT+TGG | + | chr6.1:1437355-1437374 | MS.gene82869:intron | 45.0% | |
GTCCCCATGAAAGCAAAACA+AGG | + | chr6.1:1435656-1435675 | MS.gene82869:intron | 45.0% | |
GTGACAAGTAGGGTTGCTTA+TGG | - | chr6.1:1436272-1436291 | None:intergenic | 45.0% | |
TAAGCCAGTGCCAAAGACAA+AGG | + | chr6.1:1437408-1437427 | MS.gene82869:CDS | 45.0% | |
TGGCGTCATTCGATACATGT+AGG | + | chr6.1:1434724-1434743 | MS.gene82869:intron | 45.0% | |
TGGTTCCTAAATGTACGAGG+CGG | - | chr6.1:1434562-1434581 | None:intergenic | 45.0% | |
TGTGGTCCTAATTTGGTTGC+AGG | + | chr6.1:1437334-1437353 | MS.gene82869:intron | 45.0% | |
! | AGCTTAATGCATTTGGTGGC+AGG | + | chr6.1:1436992-1437011 | MS.gene82869:intron | 45.0% |
! | TGACGGACCAAACTGATGAA+CGG | - | chr6.1:1434368-1434387 | None:intergenic | 45.0% |
!! | AATTAGATTCTGGGGTGGGA+GGG | + | chr6.1:1432918-1432937 | MS.gene82869:intron | 45.0% |
!! | CCGCGATTGATTTGTAAGGT+TGG | - | chr6.1:1435290-1435309 | None:intergenic | 45.0% |
!! | GACGAACATTAGTCTTGGCA+AGG | + | chr6.1:1434057-1434076 | MS.gene82869:CDS | 45.0% |
!! | GGTTTCCCTAGTGGATTGAT+TGG | + | chr6.1:1434434-1434453 | MS.gene82869:intron | 45.0% |
!! | TAATTAGATTCTGGGGTGGG+AGG | + | chr6.1:1432917-1432936 | MS.gene82869:intron | 45.0% |
!! | TTCATCCCTTCTTTTGGGTG+AGG | + | chr6.1:1434138-1434157 | MS.gene82869:CDS | 45.0% |
!! | ATTTAAATAAATAGTATATT+TGG | + | chr6.1:1436592-1436611 | MS.gene82869:intron | 5.0% |
AATGCCACTCCCCCAACTAT+AGG | - | chr6.1:1434893-1434912 | None:intergenic | 50.0% | |
AATGTATGAGCCACGGCAAG+TGG | - | chr6.1:1434025-1434044 | None:intergenic | 50.0% | |
ACTGCAGATTGCAGGTACGA+AGG | - | chr6.1:1435522-1435541 | None:intergenic | 50.0% | |
ACTTGCCGTGGCTCATACAT+TGG | + | chr6.1:1434024-1434043 | MS.gene82869:CDS | 50.0% | |
CCAATGAAGCAAAGCCGAAC+TGG | - | chr6.1:1433806-1433825 | None:intergenic | 50.0% | |
CCAGTTCGGCTTTGCTTCAT+TGG | + | chr6.1:1433803-1433822 | MS.gene82869:CDS | 50.0% | |
CGATGTTTCAGTGTCGTGTC+CGG | + | chr6.1:1433117-1433136 | MS.gene82869:intron | 50.0% | |
CTGAGGCACAGAGTGATGAA+GGG | + | chr6.1:1432420-1432439 | MS.gene82869:CDS | 50.0% | |
CTTGCCGTGGCTCATACATT+GGG | + | chr6.1:1434025-1434044 | MS.gene82869:CDS | 50.0% | |
GCTTCCTTTGTCTTTGGCAC+TGG | - | chr6.1:1437415-1437434 | None:intergenic | 50.0% | |
TATAGTTGGGGGAGTGGCAT+TGG | + | chr6.1:1434892-1434911 | MS.gene82869:CDS | 50.0% | |
TCACCTGTGACACACTCAGT+CGG | + | chr6.1:1437041-1437060 | MS.gene82869:CDS | 50.0% | |
TCTACCTATAGTTGGGGGAG+TGG | + | chr6.1:1434886-1434905 | MS.gene82869:CDS | 50.0% | |
TGACACCGCCTCGTACATTT+AGG | + | chr6.1:1434554-1434573 | MS.gene82869:intron | 50.0% | |
TGACAGGTGAGACAGGAGTT+TGG | - | chr6.1:1437115-1437134 | None:intergenic | 50.0% | |
TTCCCTCTGTTTGTCTCTGC+TGG | - | chr6.1:1434501-1434520 | None:intergenic | 50.0% | |
TTGCCGTGGCTCATACATTG+GGG | + | chr6.1:1434026-1434045 | MS.gene82869:CDS | 50.0% | |
TTTCCGACTGAGTGTGTCAC+AGG | - | chr6.1:1437047-1437066 | None:intergenic | 50.0% | |
! | GTGCCGACCTCCATGATAAA+AGG | - | chr6.1:1436739-1436758 | None:intergenic | 50.0% |
! | TGCTGCTTCTTCTGTTCCTG+AGG | + | chr6.1:1432403-1432422 | MS.gene82869:CDS | 50.0% |
!! | ATTAGATTCTGGGGTGGGAG+GGG | + | chr6.1:1432919-1432938 | MS.gene82869:intron | 50.0% |
!! | GACTTACCAAGGGCATTGAC+AGG | - | chr6.1:1437131-1437150 | None:intergenic | 50.0% |
ACCTCACCTGCTGGTATGCA+TGG | - | chr6.1:1435919-1435938 | None:intergenic | 55.0% | |
AGCAATCCTTCCACTTGCCG+TGG | + | chr6.1:1434012-1434031 | MS.gene82869:CDS | 55.0% | |
CCTGAGGCACAGAGTGATGA+AGG | + | chr6.1:1432419-1432438 | MS.gene82869:CDS | 55.0% | |
CCTTCATCACTCTGTGCCTC+AGG | - | chr6.1:1432422-1432441 | None:intergenic | 55.0% | |
CTGCTTCCATGCATACCAGC+AGG | + | chr6.1:1435910-1435929 | MS.gene82869:CDS | 55.0% | |
GTCTCACCTGTCAATGCCCT+TGG | + | chr6.1:1437122-1437141 | MS.gene82869:CDS | 55.0% | |
TATGAGCCACGGCAAGTGGA+AGG | - | chr6.1:1434021-1434040 | None:intergenic | 55.0% | |
TCCATGCATACCAGCAGGTG+AGG | + | chr6.1:1435915-1435934 | MS.gene82869:intron | 55.0% | |
TGTTTCAGTGTCGTGTCCGG+TGG | + | chr6.1:1433120-1433139 | MS.gene82869:intron | 55.0% | |
!! | AGGGCATTGACAGGTGAGAC+AGG | - | chr6.1:1437122-1437141 | None:intergenic | 55.0% |
! | TCTGGGGTGGGAGGGGAAAA+GGG | + | chr6.1:1432926-1432945 | MS.gene82869:intron | 60.0% |
!! | TTCTGGGGTGGGAGGGGAAA+AGG | + | chr6.1:1432925-1432944 | MS.gene82869:intron | 60.0% |
Chromosome | Type | Strat | End | Strand | Name |
---|---|---|---|---|---|
chr6.1 | gene | 1432383 | 1437438 | 1432383 | ID=MS.gene82869 |
chr6.1 | mRNA | 1432383 | 1437438 | 1432383 | ID=MS.gene82869.t1;Parent=MS.gene82869 |
chr6.1 | exon | 1432383 | 1432541 | 1432383 | ID=MS.gene82869.t1.exon1;Parent=MS.gene82869.t1 |
chr6.1 | CDS | 1432383 | 1432541 | 1432383 | ID=cds.MS.gene82869.t1;Parent=MS.gene82869.t1 |
chr6.1 | exon | 1433762 | 1433884 | 1433762 | ID=MS.gene82869.t1.exon2;Parent=MS.gene82869.t1 |
chr6.1 | CDS | 1433762 | 1433884 | 1433762 | ID=cds.MS.gene82869.t1;Parent=MS.gene82869.t1 |
chr6.1 | exon | 1434007 | 1434159 | 1434007 | ID=MS.gene82869.t1.exon3;Parent=MS.gene82869.t1 |
chr6.1 | CDS | 1434007 | 1434159 | 1434007 | ID=cds.MS.gene82869.t1;Parent=MS.gene82869.t1 |
chr6.1 | exon | 1434857 | 1434942 | 1434857 | ID=MS.gene82869.t1.exon4;Parent=MS.gene82869.t1 |
chr6.1 | CDS | 1434857 | 1434942 | 1434857 | ID=cds.MS.gene82869.t1;Parent=MS.gene82869.t1 |
chr6.1 | exon | 1435261 | 1435345 | 1435261 | ID=MS.gene82869.t1.exon5;Parent=MS.gene82869.t1 |
chr6.1 | CDS | 1435261 | 1435345 | 1435261 | ID=cds.MS.gene82869.t1;Parent=MS.gene82869.t1 |
chr6.1 | exon | 1435420 | 1435539 | 1435420 | ID=MS.gene82869.t1.exon6;Parent=MS.gene82869.t1 |
chr6.1 | CDS | 1435420 | 1435539 | 1435420 | ID=cds.MS.gene82869.t1;Parent=MS.gene82869.t1 |
chr6.1 | exon | 1435854 | 1435931 | 1435854 | ID=MS.gene82869.t1.exon7;Parent=MS.gene82869.t1 |
chr6.1 | CDS | 1435854 | 1435931 | 1435854 | ID=cds.MS.gene82869.t1;Parent=MS.gene82869.t1 |
chr6.1 | exon | 1437014 | 1437143 | 1437014 | ID=MS.gene82869.t1.exon8;Parent=MS.gene82869.t1 |
chr6.1 | CDS | 1437014 | 1437143 | 1437014 | ID=cds.MS.gene82869.t1;Parent=MS.gene82869.t1 |
chr6.1 | exon | 1437356 | 1437438 | 1437356 | ID=MS.gene82869.t1.exon9;Parent=MS.gene82869.t1 |
chr6.1 | CDS | 1437356 | 1437438 | 1437356 | ID=cds.MS.gene82869.t1;Parent=MS.gene82869.t1 |
Gene Sequence |
Protein sequence |